Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72128.t1 | XP_024628991.1 | 99.1 | 322 | 3 | 0 | 1 | 322 | 438 | 759 | 1.20E-179 | 639 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72128.t1 | F4I3P9 | 87.4 | 317 | 40 | 0 | 6 | 322 | 456 | 772 | 2.4e-162 | 572.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72128.t1 | A0A396GQN9 | 99.1 | 322 | 3 | 0 | 1 | 322 | 438 | 759 | 8.3e-180 | 639.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene72128 | 0.806645 | 7.44E-50 | -1.69E-46 |
| MS.gene049297 | MS.gene72128 | 0.875356 | 3.29E-68 | -1.69E-46 |
| MS.gene049322 | MS.gene72128 | 0.80498 | 1.67E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene72128 | 0.83567 | 1.47E-56 | -1.69E-46 |
| MS.gene049758 | MS.gene72128 | 0.813004 | 3.19E-51 | -1.69E-46 |
| MS.gene04987 | MS.gene72128 | 0.820043 | 8.45E-53 | -1.69E-46 |
| MS.gene04988 | MS.gene72128 | 0.806959 | 6.38E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene72128 | 0.854531 | 1.16E-61 | -1.69E-46 |
| MS.gene050227 | MS.gene72128 | 0.866859 | 2.09E-65 | -1.69E-46 |
| MS.gene050228 | MS.gene72128 | 0.862837 | 3.82E-64 | -1.69E-46 |
| MS.gene050277 | MS.gene72128 | 0.805472 | 1.31E-49 | -1.69E-46 |
| MS.gene050303 | MS.gene72128 | 0.847979 | 8.21E-60 | -1.69E-46 |
| MS.gene050330 | MS.gene72128 | -0.83061 | 2.66E-55 | -1.69E-46 |
| MS.gene050623 | MS.gene72128 | -0.880483 | 5.29E-70 | -1.69E-46 |
| MS.gene050642 | MS.gene72128 | 0.91886 | 9.25E-87 | -1.69E-46 |
| MS.gene050987 | MS.gene72128 | 0.805905 | 1.07E-49 | -1.69E-46 |
| MS.gene051240 | MS.gene72128 | 0.819346 | 1.22E-52 | -1.69E-46 |
| MS.gene051257 | MS.gene72128 | 0.816979 | 4.18E-52 | -1.69E-46 |
| MS.gene051349 | MS.gene72128 | 0.805889 | 1.07E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene72128 | 0.812373 | 4.38E-51 | -1.69E-46 |
| MS.gene051662 | MS.gene72128 | 0.849257 | 3.63E-60 | -1.69E-46 |
| MS.gene051663 | MS.gene72128 | 0.817083 | 3.96E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene72128 | 0.869435 | 3.10E-66 | -1.69E-46 |
| MS.gene052077 | MS.gene72128 | 0.80301 | 4.28E-49 | -1.69E-46 |
| MS.gene052176 | MS.gene72128 | 0.892003 | 2.37E-74 | -1.69E-46 |
| MS.gene052286 | MS.gene72128 | 0.808699 | 2.72E-50 | -1.69E-46 |
| MS.gene052302 | MS.gene72128 | 0.856514 | 3.06E-62 | -1.69E-46 |
| MS.gene052309 | MS.gene72128 | -0.874746 | 5.31E-68 | -1.69E-46 |
| MS.gene052376 | MS.gene72128 | 0.864379 | 1.27E-64 | -1.69E-46 |
| MS.gene052389 | MS.gene72128 | 0.814892 | 1.22E-51 | -1.69E-46 |
| MS.gene052600 | MS.gene72128 | 0.918496 | 1.45E-86 | -1.69E-46 |
| MS.gene052856 | MS.gene72128 | 0.808265 | 3.37E-50 | -1.69E-46 |
| MS.gene052858 | MS.gene72128 | 0.814917 | 1.21E-51 | -1.69E-46 |
| MS.gene052860 | MS.gene72128 | 0.81347 | 2.52E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene72128 | 0.80863 | 2.82E-50 | -1.69E-46 |
| MS.gene053188 | MS.gene72128 | 0.801799 | 7.59E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene72128 | 0.802321 | 5.93E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene72128 | 0.838976 | 2.09E-57 | -1.69E-46 |
| MS.gene053907 | MS.gene72128 | 0.810731 | 9.96E-51 | -1.69E-46 |
| MS.gene054537 | MS.gene72128 | 0.817866 | 2.64E-52 | -1.69E-46 |
| MS.gene054701 | MS.gene72128 | 0.824857 | 6.43E-54 | -1.69E-46 |
| MS.gene054930 | MS.gene72128 | 0.829929 | 3.91E-55 | -1.69E-46 |
| MS.gene054942 | MS.gene72128 | 0.876629 | 1.20E-68 | -1.69E-46 |
| MS.gene054983 | MS.gene72128 | 0.811234 | 7.75E-51 | -1.69E-46 |
| MS.gene055441 | MS.gene72128 | 0.810411 | 1.17E-50 | -1.69E-46 |
| MS.gene056087 | MS.gene72128 | 0.807494 | 4.92E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene72128 | 0.864667 | 1.03E-64 | -1.69E-46 |
| MS.gene057060 | MS.gene72128 | 0.801947 | 7.08E-49 | -1.69E-46 |
| MS.gene057079 | MS.gene72128 | 0.831962 | 1.24E-55 | -1.69E-46 |
| MS.gene057121 | MS.gene72128 | 0.816936 | 4.28E-52 | -1.69E-46 |
| MS.gene057555 | MS.gene72128 | 0.816574 | 5.16E-52 | -1.69E-46 |
| MS.gene057967 | MS.gene72128 | 0.805166 | 1.52E-49 | -1.69E-46 |
| MS.gene058142 | MS.gene72128 | 0.843313 | 1.51E-58 | -1.69E-46 |
| MS.gene058200 | MS.gene72128 | 0.819942 | 8.91E-53 | -1.69E-46 |
| MS.gene058201 | MS.gene72128 | 0.837835 | 4.11E-57 | -1.69E-46 |
| MS.gene058238 | MS.gene72128 | 0.817041 | 4.05E-52 | -1.69E-46 |
| MS.gene058276 | MS.gene72128 | 0.805797 | 1.12E-49 | -1.69E-46 |
| MS.gene058399 | MS.gene72128 | 0.810444 | 1.15E-50 | -1.69E-46 |
| MS.gene058749 | MS.gene72128 | 0.82147 | 3.97E-53 | -1.69E-46 |
| MS.gene058833 | MS.gene72128 | 0.865707 | 4.86E-65 | -1.69E-46 |
| MS.gene059247 | MS.gene72128 | 0.822734 | 2.02E-53 | -1.69E-46 |
| MS.gene059569 | MS.gene72128 | 0.806674 | 7.33E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene72128 | 0.828109 | 1.08E-54 | -1.69E-46 |
| MS.gene059894 | MS.gene72128 | 0.815106 | 1.10E-51 | -1.69E-46 |
| MS.gene059899 | MS.gene72128 | 0.828039 | 1.12E-54 | -1.69E-46 |
| MS.gene060084 | MS.gene72128 | 0.803598 | 3.23E-49 | -1.69E-46 |
| MS.gene060165 | MS.gene72128 | 0.821062 | 4.93E-53 | -1.69E-46 |
| MS.gene060297 | MS.gene72128 | 0.857637 | 1.43E-62 | -1.69E-46 |
| MS.gene060619 | MS.gene72128 | 0.80953 | 1.81E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene72128 | -0.827458 | 1.55E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72128.t1 | MTR_8g098345 | 99.038 | 312 | 3 | 0 | 1 | 312 | 438 | 749 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72128.t1 | AT1G63680 | 87.382 | 317 | 40 | 0 | 6 | 322 | 456 | 772 | 0.0 | 588 |
| MS.gene72128.t1 | AT1G63680 | 87.382 | 317 | 40 | 0 | 6 | 322 | 456 | 772 | 0.0 | 588 |
| MS.gene72128.t1 | AT1G63680 | 87.382 | 317 | 40 | 0 | 6 | 322 | 456 | 772 | 0.0 | 588 |
Find 98 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTATTTGATATGTTTCA+TGG | 0.262320 | 4.2:+6336796 | None:intergenic |
| CATTGCTGTTGGGGCACCCT+TGG | 0.269688 | 4.2:-6338749 | MS.gene72128:CDS |
| GAAGAGGTTGATGCAGTTCC+TGG | 0.277253 | 4.2:-6338706 | MS.gene72128:CDS |
| CTGTTGCTATCTTTGTCATC+AGG | 0.281451 | 4.2:+6338323 | None:intergenic |
| TCAAATAGAAGGTGAGAAAA+AGG | 0.297061 | 4.2:-6336784 | MS.gene72128:CDS |
| TGGCAGTTGGCATTGCTGTT+GGG | 0.297200 | 4.2:-6338759 | MS.gene72128:CDS |
| ATGCAAGAGTATCTGAAATA+TGG | 0.320054 | 4.2:-6338057 | MS.gene72128:CDS |
| TGCGCCTTTGTTCGTTTCAA+TGG | 0.326884 | 4.2:-6338962 | MS.gene72128:CDS |
| TAATACACCTGCTGGGATAC+TGG | 0.337449 | 4.2:-6338836 | MS.gene72128:CDS |
| GCGCCTTTGTTCGTTTCAAT+GGG | 0.352036 | 4.2:-6338961 | MS.gene72128:CDS |
| TTGACGAGGAACAAGCATTT+GGG | 0.363745 | 4.2:-6338669 | MS.gene72128:CDS |
| ATTGACGAGGAACAAGCATT+TGG | 0.368221 | 4.2:-6338670 | MS.gene72128:CDS |
| CCCTTGGAGGATATTGTTAG+AGG | 0.378411 | 4.2:-6338733 | MS.gene72128:CDS |
| GTGGCAGTTGGCATTGCTGT+TGG | 0.380126 | 4.2:-6338760 | MS.gene72128:CDS |
| AAGCCTCCCTGCACTCTTCT+CGG | 0.384444 | 4.2:+6336748 | None:intergenic |
| ATCTTCACCCTTGGGGTTGT+CGG | 0.392594 | 4.2:+6338273 | None:intergenic |
| TGCTGTTGGGGCACCCTTGG+AGG | 0.395991 | 4.2:-6338746 | MS.gene72128:CDS |
| CATGAAACATATCAAATAGA+AGG | 0.403779 | 4.2:-6336795 | MS.gene72128:CDS |
| AATGTCACAACAGGAACTTC+AGG | 0.413089 | 4.2:+6338934 | None:intergenic |
| CAAAGAGAGTTCAAACTTCA+AGG | 0.427492 | 4.2:+6338879 | None:intergenic |
| CAACCTCGCAGGATTATAAC+TGG | 0.428629 | 4.2:-6338580 | MS.gene72128:intron |
| GAAATTTCGTCCGGTTTACT+AGG | 0.429518 | 4.2:-6338814 | MS.gene72128:CDS |
| CTTTGGTATCAGTGGCTCTC+TGG | 0.432741 | 4.2:+6336509 | None:intergenic |
| GGATGAGGAGGACGAGGAAG+AGG | 0.435631 | 4.2:-6339067 | MS.gene72128:CDS |
| ATACATGGATCTTCACCCTT+GGG | 0.437950 | 4.2:+6338265 | None:intergenic |
| TGTTGCTATCTTTGTCATCA+GGG | 0.440012 | 4.2:+6338324 | None:intergenic |
| TGCATGGTGCAGGTGATTGC+TGG | 0.441426 | 4.2:-6336825 | MS.gene72128:intron |
| GTGCGAGCTTCAGTTGCAAT+GGG | 0.443311 | 4.2:-6337964 | MS.gene72128:CDS |
| ATTCTTGCTGCTGTGGCAGT+TGG | 0.464613 | 4.2:-6338772 | MS.gene72128:CDS |
| ACAACTTTCCTATGCCGCTC+AGG | 0.466784 | 4.2:+6339003 | None:intergenic |
| GAAACGAACAAAGGCGCACT+TGG | 0.476109 | 4.2:+6338967 | None:intergenic |
| GGCAGTTGGCATTGCTGTTG+GGG | 0.477281 | 4.2:-6338758 | MS.gene72128:CDS |
| TTGCTGTGGTGAGGACGAAA+GGG | 0.479403 | 4.2:-6338356 | MS.gene72128:CDS |
| TACTATCCTCCTCTTTCAAA+TGG | 0.483577 | 4.2:-6338024 | MS.gene72128:CDS |
| TCCAACGCAAATGTCACAAC+AGG | 0.486132 | 4.2:+6338925 | None:intergenic |
| TCGATGACCGAGAAGAGTGC+AGG | 0.490095 | 4.2:-6336755 | MS.gene72128:CDS |
| TGGTGGATCCTGAGCGGCAT+AGG | 0.495152 | 4.2:-6339011 | MS.gene72128:CDS |
| CTCCTCTTTCAAATGGTCAC+AGG | 0.497529 | 4.2:-6338017 | MS.gene72128:CDS |
| GTTGCTGTGGTGAGGACGAA+AGG | 0.503031 | 4.2:-6338357 | MS.gene72128:CDS |
| TTTGTTTGAGACACAGGTGT+TGG | 0.506074 | 4.2:-6338860 | MS.gene72128:CDS |
| AGTAATCTAGACAAGGCATC+AGG | 0.506209 | 4.2:+6338622 | None:intergenic |
| CCCTCTAACAATATCCTCCA+AGG | 0.511090 | 4.2:+6338732 | None:intergenic |
| TTTCGTCCGGTTTACTAGGA+AGG | 0.513445 | 4.2:-6338810 | MS.gene72128:CDS |
| CATACATGGATCTTCACCCT+TGG | 0.516195 | 4.2:+6338264 | None:intergenic |
| ATTGTGCCTTCCTAGTAAAC+CGG | 0.517946 | 4.2:+6338804 | None:intergenic |
| GTGTTGGTTAATACACCTGC+TGG | 0.525818 | 4.2:-6338844 | MS.gene72128:CDS |
| TGTGCGAGCTTCAGTTGCAA+TGG | 0.526133 | 4.2:-6337965 | MS.gene72128:CDS |
| GGGATACTGGAAATTTCGTC+CGG | 0.527829 | 4.2:-6338823 | MS.gene72128:CDS |
| ACTCTCTTTGTTTGAGACAC+AGG | 0.527870 | 4.2:-6338866 | MS.gene72128:CDS |
| GTTGACGAGCTTCATCAAGC+TGG | 0.530037 | 4.2:-6336717 | MS.gene72128:CDS |
| AACATTTGACATTACCGCCA+TGG | 0.539836 | 4.2:+6336675 | None:intergenic |
| ATGTCACAACAGGAACTTCA+GGG | 0.545053 | 4.2:+6338935 | None:intergenic |
| ATATGTTGGCTGGGGTAGGA+TGG | 0.546203 | 4.2:-6338083 | MS.gene72128:CDS |
| AAGAGGTTGATGCAGTTCCT+GGG | 0.546388 | 4.2:-6338705 | MS.gene72128:CDS |
| GGGTCATAGTGGACTATGCT+CGG | 0.551938 | 4.2:-6338648 | MS.gene72128:CDS |
| TACGAATTTGATGGATGAGG+AGG | 0.554797 | 4.2:-6339079 | None:intergenic |
| TCCTGTTGTGACATTTGCGT+TGG | 0.555371 | 4.2:-6338926 | MS.gene72128:CDS |
| CCTTGGAGGATATTGTTAGA+GGG | 0.557443 | 4.2:-6338732 | MS.gene72128:CDS |
| TAAGAGAGCTTCAACCTCGC+AGG | 0.561657 | 4.2:-6338591 | MS.gene72128:CDS |
| TCAATTAACTCACACCTCCC+AGG | 0.561944 | 4.2:+6338688 | None:intergenic |
| CAGCTACCCTCCTAATGTCA+TGG | 0.562556 | 4.2:+6337986 | None:intergenic |
| ACAAGCATTTGGGGTCATAG+TGG | 0.564472 | 4.2:-6338659 | MS.gene72128:CDS |
| TTTGAAGTGATTGGTTGCTG+TGG | 0.568006 | 4.2:-6338370 | MS.gene72128:intron |
| TAGATACAAGTGAATTTCCA+TGG | 0.572678 | 4.2:-6336692 | MS.gene72128:CDS |
| GTGCAGGTGATTGCTGGTAA+AGG | 0.573284 | 4.2:-6336819 | MS.gene72128:intron |
| GTTGCTATCTTTGTCATCAG+GGG | 0.577328 | 4.2:+6338325 | None:intergenic |
| TTACAACATTCTTGCTGCTG+TGG | 0.577487 | 4.2:-6338779 | MS.gene72128:CDS |
| GGAAGAGGATAGAGATGCGA+AGG | 0.577527 | 4.2:-6339052 | MS.gene72128:CDS |
| TATTGTTAGAGGGATTGAAG+AGG | 0.584456 | 4.2:-6338722 | MS.gene72128:CDS |
| CGATGACCGAGAAGAGTGCA+GGG | 0.586317 | 4.2:-6336754 | MS.gene72128:CDS |
| AAAGAGAGTTCAAACTTCAA+GGG | 0.587138 | 4.2:+6338880 | None:intergenic |
| GACGATATGTTGGCTGGGGT+AGG | 0.590280 | 4.2:-6338087 | MS.gene72128:CDS |
| TTTGATGGATGAGGAGGACG+AGG | 0.591487 | 4.2:-6339073 | None:intergenic |
| AGCCTGTGACCATTTGAAAG+AGG | 0.592989 | 4.2:+6338015 | None:intergenic |
| GGGGTTGTCGGATGTCAGCA+TGG | 0.593109 | 4.2:+6338285 | None:intergenic |
| CGCCTTTGTTCGTTTCAATG+GGG | 0.598646 | 4.2:-6338960 | MS.gene72128:CDS |
| GCGAGCTTCAGTTGCAATGG+GGG | 0.600223 | 4.2:-6337962 | MS.gene72128:CDS |
| GAAATTTCCAGTATCCCAGC+AGG | 0.601448 | 4.2:+6338829 | None:intergenic |
| TACATGGATCTTCACCCTTG+GGG | 0.602061 | 4.2:+6338266 | None:intergenic |
| TGACGAGGAACAAGCATTTG+GGG | 0.607098 | 4.2:-6338668 | MS.gene72128:CDS |
| CTCCCCATTGAAACGAACAA+AGG | 0.607522 | 4.2:+6338958 | None:intergenic |
| TTTGGACGATATGTTGGCTG+GGG | 0.620608 | 4.2:-6338091 | MS.gene72128:CDS |
| CTGTGACCATTTGAAAGAGG+AGG | 0.627307 | 4.2:+6338018 | None:intergenic |
| AGTGATTGGTTGCTGTGGTG+AGG | 0.627564 | 4.2:-6338365 | MS.gene72128:CDS |
| CCTCTAACAATATCCTCCAA+GGG | 0.631799 | 4.2:+6338733 | None:intergenic |
| TGCGAGCTTCAGTTGCAATG+GGG | 0.637029 | 4.2:-6337963 | MS.gene72128:CDS |
| GCTGTGGTGAGGACGAAAGG+GGG | 0.640166 | 4.2:-6338354 | MS.gene72128:CDS |
| TGTTGGTTAATACACCTGCT+GGG | 0.653292 | 4.2:-6338843 | MS.gene72128:CDS |
| TGCTGTGGTGAGGACGAAAG+GGG | 0.660888 | 4.2:-6338355 | MS.gene72128:CDS |
| CAAGGATGGTGGATCCTGAG+CGG | 0.668101 | 4.2:-6339017 | MS.gene72128:CDS |
| GCTGACATCCGACAACCCCA+AGG | 0.672170 | 4.2:-6338281 | MS.gene72128:CDS |
| CTGACATCCGACAACCCCAA+GGG | 0.697527 | 4.2:-6338280 | MS.gene72128:CDS |
| AGAATCAAGTAATCTAGACA+AGG | 0.699983 | 4.2:+6338615 | None:intergenic |
| AGGTTGATGCAGTTCCTGGG+AGG | 0.713356 | 4.2:-6338702 | MS.gene72128:CDS |
| ATACCAGTTATAATCCTGCG+AGG | 0.748233 | 4.2:+6338577 | None:intergenic |
| TGACCGAGAAGAGTGCAGGG+AGG | 0.749733 | 4.2:-6336751 | MS.gene72128:CDS |
| GAGGTGTGAGTTAATTGACG+AGG | 0.756211 | 4.2:-6338683 | MS.gene72128:CDS |
| ATACAAGTGAATTTCCATGG+CGG | 0.800600 | 4.2:-6336689 | MS.gene72128:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAGATGAGT+TGG | + | chr4.2:6338602-6338621 | None:intergenic | 15.0% |
| !! | ACAAAATTCTGAATATTTAT+AGG | - | chr4.2:6337982-6338001 | MS.gene72128:CDS | 15.0% |
| !! | ATGAAATTCTGAATATTTAT+AGG | + | chr4.2:6337822-6337841 | None:intergenic | 15.0% |
| !! | CAAAATTCTGAATATTTATA+GGG | - | chr4.2:6337983-6338002 | MS.gene72128:CDS | 15.0% |
| !! | TGAAATTCTGAATATTTATA+GGG | + | chr4.2:6337821-6337840 | None:intergenic | 15.0% |
| !!! | AAAGTGTAATTTTATTTTGT+AGG | - | chr4.2:6337951-6337970 | MS.gene72128:CDS | 15.0% |
| !!! | AACTCATCTTTTTTTTTTTT+TGG | - | chr4.2:6338601-6338620 | MS.gene72128:CDS | 15.0% |
| !!! | AAGTGTAATTTTATTTTGTA+GGG | - | chr4.2:6337952-6337971 | MS.gene72128:CDS | 15.0% |
| !!! | ACTCATCTTTTTTTTTTTTT+GGG | - | chr4.2:6338602-6338621 | MS.gene72128:CDS | 15.0% |
| !! | AACAAACATAGAATAACTAT+TGG | - | chr4.2:6338272-6338291 | MS.gene72128:CDS | 20.0% |
| !! | AATAGGGTTAATTAAGTAAA+TGG | - | chr4.2:6337794-6337813 | MS.gene72128:intron | 20.0% |
| !! | ATTAAATCTTACTTAGTGAA+TGG | - | chr4.2:6338507-6338526 | MS.gene72128:intron | 20.0% |
| !! | CAAAATATTAATATGCAAGA+AGG | - | chr4.2:6338689-6338708 | MS.gene72128:CDS | 20.0% |
| !! | GCATAATTAATTATATCGTT+TGG | - | chr4.2:6337144-6337163 | MS.gene72128:intron | 20.0% |
| !! | GTTTGATGCATTTAAATTTA+AGG | + | chr4.2:6338255-6338274 | None:intergenic | 20.0% |
| !!! | AAGAAGGAATTGTTTATTTT+TGG | - | chr4.2:6338705-6338724 | MS.gene72128:CDS | 20.0% |
| !!! | ACTTTTTACTTTTTATTCAG+TGG | - | chr4.2:6337468-6337487 | MS.gene72128:intron | 20.0% |
| !!! | ATATTTTCCTTTAGCATTTT+AGG | + | chr4.2:6337919-6337938 | None:intergenic | 20.0% |
| !!! | CTTCTTGCATATTAATATTT+TGG | + | chr4.2:6338691-6338710 | None:intergenic | 20.0% |
| !!! | GTAAAAAGTATGAAAGAATT+AGG | + | chr4.2:6337457-6337476 | None:intergenic | 20.0% |
| !!! | TATTTTCCTTTAGCATTTTA+GGG | + | chr4.2:6337918-6337937 | None:intergenic | 20.0% |
| !!! | TTGCTTAATTTAAACCATTT+TGG | - | chr4.2:6337741-6337760 | MS.gene72128:intron | 20.0% |
| !!! | TTTTACGTCAACATTTTTTT+TGG | - | chr4.2:6337891-6337910 | MS.gene72128:intron | 20.0% |
| !!! | TTTTTATTCAGTGGATATTT+TGG | - | chr4.2:6337477-6337496 | MS.gene72128:intron | 20.0% |
| !!! | TTTTTGGGTTACTAATTATA+AGG | - | chr4.2:6337097-6337116 | MS.gene72128:intron | 20.0% |
| ! | AATTATTATTCGTATTCACG+TGG | - | chr4.2:6338303-6338322 | MS.gene72128:CDS | 25.0% |
| ! | ACACATCTTAATATTGTTCA+AGG | + | chr4.2:6338027-6338046 | None:intergenic | 25.0% |
| ! | AGTTAAGACATTGTGAAATT+TGG | + | chr4.2:6337418-6337437 | None:intergenic | 25.0% |
| ! | AGTTCAAAACAAAATTGAGA+AGG | + | chr4.2:6337068-6337087 | None:intergenic | 25.0% |
| ! | ATACGAATAATAATTGTGGA+TGG | + | chr4.2:6338298-6338317 | None:intergenic | 25.0% |
| ! | ATTAGGATTCCAACATTTAA+GGG | + | chr4.2:6338424-6338443 | None:intergenic | 25.0% |
| ! | CACATCTTAATATTGTTCAA+GGG | + | chr4.2:6338026-6338045 | None:intergenic | 25.0% |
| ! | CATGAAACATATCAAATAGA+AGG | - | chr4.2:6338791-6338810 | MS.gene72128:CDS | 25.0% |
| ! | CTTCAAAAGAAGAAAAAAGA+CGG | + | chr4.2:6337203-6337222 | None:intergenic | 25.0% |
| ! | CTTCTATTTGATATGTTTCA+TGG | + | chr4.2:6338793-6338812 | None:intergenic | 25.0% |
| ! | GTGAATACGAATAATAATTG+TGG | + | chr4.2:6338302-6338321 | None:intergenic | 25.0% |
| ! | GTTAAGACATTGTGAAATTT+GGG | + | chr4.2:6337417-6337436 | None:intergenic | 25.0% |
| ! | TCAAAGTGATATTTCAACTA+AGG | - | chr4.2:6338048-6338067 | MS.gene72128:CDS | 25.0% |
| ! | TCAAGGGTTAATTAAGTAAA+TGG | + | chr4.2:6338010-6338029 | None:intergenic | 25.0% |
| ! | TCACTAAGTAAGATTTAATG+AGG | + | chr4.2:6338506-6338525 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr4.2:6338160-6338179 | None:intergenic | 25.0% |
| ! | TGTATTTCTCTTAATTGATG+TGG | - | chr4.2:6337035-6337054 | MS.gene72128:intron | 25.0% |
| !! | GTTGACGTAAAATTTTTACA+GGG | + | chr4.2:6337883-6337902 | None:intergenic | 25.0% |
| !! | TGTTGACGTAAAATTTTTAC+AGG | + | chr4.2:6337884-6337903 | None:intergenic | 25.0% |
| !! | TTCCATTGCTACTTAATTTA+GGG | + | chr4.2:6338191-6338210 | None:intergenic | 25.0% |
| !! | TTTCCATTGCTACTTAATTT+AGG | + | chr4.2:6338192-6338211 | None:intergenic | 25.0% |
| !!! | ATTTAAACCATTTTGGTTCT+TGG | - | chr4.2:6337748-6337767 | MS.gene72128:intron | 25.0% |
| !!! | TCTCAATTTTGTTTTGAACT+TGG | - | chr4.2:6337068-6337087 | MS.gene72128:intron | 25.0% |
| !!! | TGAACTTGGAGAAATTTTTT+GGG | - | chr4.2:6337082-6337101 | MS.gene72128:intron | 25.0% |
| !!! | TGTTGTTGCAACTTATTTTA+GGG | + | chr4.2:6338079-6338098 | None:intergenic | 25.0% |
| !!! | TTGAACTTGGAGAAATTTTT+TGG | - | chr4.2:6337081-6337100 | MS.gene72128:intron | 25.0% |
| !!! | TTGTTGTTGCAACTTATTTT+AGG | + | chr4.2:6338080-6338099 | None:intergenic | 25.0% |
| !!! | TTTTCTTCTTTTGAAGTGAT+TGG | - | chr4.2:6337207-6337226 | MS.gene72128:intron | 25.0% |
| !!! | TTTTGTTGTCTTTTTATGAC+TGG | - | chr4.2:6338940-6338959 | MS.gene72128:CDS | 25.0% |
| !!! | TTTTTTTTTGGGTATGAACT+TGG | - | chr4.2:6338613-6338632 | MS.gene72128:CDS | 25.0% |
| AAAAGAAGAAAAAAGACGGT+CGG | + | chr4.2:6337199-6337218 | None:intergenic | 30.0% | |
| AAAGAGAGTTCAAACTTCAA+GGG | + | chr4.2:6336709-6336728 | None:intergenic | 30.0% | |
| ACTAATCCCCTTAATCATTT+CGG | - | chr4.2:6338660-6338679 | MS.gene72128:CDS | 30.0% | |
| AGAAATACCAAGAACCAAAA+TGG | + | chr4.2:6337758-6337777 | None:intergenic | 30.0% | |
| AGAATCAAGTAATCTAGACA+AGG | + | chr4.2:6336974-6336993 | None:intergenic | 30.0% | |
| ATGCTAAAGGAAAATATCAC+AGG | - | chr4.2:6337922-6337941 | MS.gene72128:intron | 30.0% | |
| CCAATGTCAAAATACATACA+TGG | + | chr4.2:6337339-6337358 | None:intergenic | 30.0% | |
| CTTAATTTAGGGAAATGTGA+TGG | + | chr4.2:6338180-6338199 | None:intergenic | 30.0% | |
| GATCTTATGAAGTTACAACT+TGG | - | chr4.2:6338370-6338389 | MS.gene72128:intron | 30.0% | |
| GATTAGGATTCCAACATTTA+AGG | + | chr4.2:6338425-6338444 | None:intergenic | 30.0% | |
| TAGATACAAGTGAATTTCCA+TGG | - | chr4.2:6338894-6338913 | MS.gene72128:CDS | 30.0% | |
| TCAAATAGAAGGTGAGAAAA+AGG | - | chr4.2:6338802-6338821 | MS.gene72128:CDS | 30.0% | |
| TGCTAAAGGAAAATATCACA+GGG | - | chr4.2:6337923-6337942 | MS.gene72128:intron | 30.0% | |
| TTAATGAGGAAAAAATCGAC+AGG | + | chr4.2:6338492-6338511 | None:intergenic | 30.0% | |
| TTAGGATTCCAACATTTAAG+GGG | + | chr4.2:6338423-6338442 | None:intergenic | 30.0% | |
| TTCAAAGCTGTTGACAAATT+TGG | - | chr4.2:6338224-6338243 | MS.gene72128:intron | 30.0% | |
| TTCCCTAAATTAAGTAGCAA+TGG | - | chr4.2:6338186-6338205 | MS.gene72128:intron | 30.0% | |
| TTCGTATATTGCTCTTAACA+AGG | + | chr4.2:6337376-6337395 | None:intergenic | 30.0% | |
| TTTCTCTTAATTGATGTGGA+AGG | - | chr4.2:6337039-6337058 | MS.gene72128:intron | 30.0% | |
| ! | ATGCTGACGAAAATTTTTAC+AGG | + | chr4.2:6337853-6337872 | None:intergenic | 30.0% |
| ! | GGAATGTGATTTGTCAATAA+GGG | - | chr4.2:6338726-6338745 | MS.gene72128:CDS | 30.0% |
| ! | TGCTGACGAAAATTTTTACA+GGG | + | chr4.2:6337852-6337871 | None:intergenic | 30.0% |
| ! | TGGAATGTGATTTGTCAATA+AGG | - | chr4.2:6338725-6338744 | MS.gene72128:CDS | 30.0% |
| !! | AGGATTAGTTAAAGCTTCAT+AGG | + | chr4.2:6338472-6338491 | None:intergenic | 30.0% |
| !! | ATGCAAGAGTATCTGAAATA+TGG | - | chr4.2:6337529-6337548 | MS.gene72128:intron | 30.0% |
| !! | TTTGTCAACAGCTTTGAATA+TGG | + | chr4.2:6338222-6338241 | None:intergenic | 30.0% |
| !!! | CCATGTATGTATTTTGACAT+TGG | - | chr4.2:6337336-6337355 | MS.gene72128:intron | 30.0% |
| ATACAAGTGAATTTCCATGG+CGG | - | chr4.2:6338897-6338916 | MS.gene72128:CDS | 35.0% | |
| CAAAGAGAGTTCAAACTTCA+AGG | + | chr4.2:6336710-6336729 | None:intergenic | 35.0% | |
| CTACTTAAACGAGACAGATT+AGG | + | chr4.2:6338441-6338460 | None:intergenic | 35.0% | |
| GGTGATTCCGAAATGATTAA+GGG | + | chr4.2:6338670-6338689 | None:intergenic | 35.0% | |
| GTGATTCCGAAATGATTAAG+GGG | + | chr4.2:6338669-6338688 | None:intergenic | 35.0% | |
| TACTATCCTCCTCTTTCAAA+TGG | - | chr4.2:6337562-6337581 | MS.gene72128:intron | 35.0% | |
| TATTGTTAGAGGGATTGAAG+AGG | - | chr4.2:6336864-6336883 | MS.gene72128:intron | 35.0% | |
| TCACAATGTCTTAACTAGCA+GGG | - | chr4.2:6337422-6337441 | MS.gene72128:intron | 35.0% | |
| TCTCTTGCATTTATTGTTGC+AGG | - | chr4.2:6339051-6339070 | MS.gene72128:CDS | 35.0% | |
| TGGTGATTCCGAAATGATTA+AGG | + | chr4.2:6338671-6338690 | None:intergenic | 35.0% | |
| TGTGGAAAAGCTGAACAATA+GGG | - | chr4.2:6337778-6337797 | MS.gene72128:intron | 35.0% | |
| TGTTGCTATCTTTGTCATCA+GGG | + | chr4.2:6337265-6337284 | None:intergenic | 35.0% | |
| TTAAAGCTTCATAGGAAGCA+AGG | + | chr4.2:6338464-6338483 | None:intergenic | 35.0% | |
| TTCACAATGTCTTAACTAGC+AGG | - | chr4.2:6337421-6337440 | MS.gene72128:intron | 35.0% | |
| TTGTGGAAAAGCTGAACAAT+AGG | - | chr4.2:6337777-6337796 | MS.gene72128:intron | 35.0% | |
| TTTGGTCCCTAAAATGCTAA+AGG | - | chr4.2:6337909-6337928 | MS.gene72128:intron | 35.0% | |
| ! | TTGGTTCTTGGTATTTCTTG+TGG | - | chr4.2:6337760-6337779 | MS.gene72128:intron | 35.0% |
| ! | TTGTCTTTTTATGACTGGCA+TGG | - | chr4.2:6338945-6338964 | MS.gene72128:CDS | 35.0% |
| ! | TTTTCTCCATGACATTAGGA+GGG | - | chr4.2:6337594-6337613 | MS.gene72128:intron | 35.0% |
| ! | TTTTTCTCCATGACATTAGG+AGG | - | chr4.2:6337593-6337612 | MS.gene72128:intron | 35.0% |
| !! | GGATATTTTGGACGATATGT+TGG | - | chr4.2:6337489-6337508 | MS.gene72128:intron | 35.0% |
| AACATTTGACATTACCGCCA+TGG | + | chr4.2:6338914-6338933 | None:intergenic | 40.0% | |
| AATGTCACAACAGGAACTTC+AGG | + | chr4.2:6336655-6336674 | None:intergenic | 40.0% | |
| ATACATGGATCTTCACCCTT+GGG | + | chr4.2:6337324-6337343 | None:intergenic | 40.0% | |
| ATACCAGTTATAATCCTGCG+AGG | + | chr4.2:6337012-6337031 | None:intergenic | 40.0% | |
| ATGTCACAACAGGAACTTCA+GGG | + | chr4.2:6336654-6336673 | None:intergenic | 40.0% | |
| ATTGACGAGGAACAAGCATT+TGG | - | chr4.2:6336916-6336935 | MS.gene72128:intron | 40.0% | |
| ATTGTGCCTTCCTAGTAAAC+CGG | + | chr4.2:6336785-6336804 | None:intergenic | 40.0% | |
| CCTCTAACAATATCCTCCAA+GGG | + | chr4.2:6336856-6336875 | None:intergenic | 40.0% | |
| CCTTGGAGGATATTGTTAGA+GGG | - | chr4.2:6336854-6336873 | MS.gene72128:intron | 40.0% | |
| CTGTTGCTATCTTTGTCATC+AGG | + | chr4.2:6337266-6337285 | None:intergenic | 40.0% | |
| GAAATTTCGTCCGGTTTACT+AGG | - | chr4.2:6336772-6336791 | MS.gene72128:CDS | 40.0% | |
| GTTGCTATCTTTGTCATCAG+GGG | + | chr4.2:6337264-6337283 | None:intergenic | 40.0% | |
| TCATGCATGAAACTGAACGT+TGG | + | chr4.2:6338341-6338360 | None:intergenic | 40.0% | |
| TTACAACATTCTTGCTGCTG+TGG | - | chr4.2:6336807-6336826 | MS.gene72128:CDS | 40.0% | |
| TTGACGAGGAACAAGCATTT+GGG | - | chr4.2:6336917-6336936 | MS.gene72128:intron | 40.0% | |
| ! | ACTCTCTTTGTTTGAGACAC+AGG | - | chr4.2:6336720-6336739 | MS.gene72128:CDS | 40.0% |
| ! | AGGGTACACTTTTATGTGCA+TGG | - | chr4.2:6338745-6338764 | MS.gene72128:CDS | 40.0% |
| ! | AGTAATCTAGACAAGGCATC+AGG | + | chr4.2:6336967-6336986 | None:intergenic | 40.0% |
| ! | ATTTTGGACGATATGTTGGC+TGG | - | chr4.2:6337493-6337512 | MS.gene72128:intron | 40.0% |
| ! | TCCAACATTTAAGGGGTACA+GGG | + | chr4.2:6338416-6338435 | None:intergenic | 40.0% |
| ! | TGTTGGTTAATACACCTGCT+GGG | - | chr4.2:6336743-6336762 | MS.gene72128:CDS | 40.0% |
| ! | TTCCAACATTTAAGGGGTAC+AGG | + | chr4.2:6338417-6338436 | None:intergenic | 40.0% |
| ! | TTTGAAGTGATTGGTTGCTG+TGG | - | chr4.2:6337216-6337235 | MS.gene72128:intron | 40.0% |
| ! | TTTGTTTGAGACACAGGTGT+TGG | - | chr4.2:6336726-6336745 | MS.gene72128:CDS | 40.0% |
| !! | GGCTTTTTCTCCATGACATT+AGG | - | chr4.2:6337590-6337609 | MS.gene72128:intron | 40.0% |
| !! | TAAGCTGTTTTCAAGGATGG+TGG | - | chr4.2:6336558-6336577 | MS.gene72128:intron | 40.0% |
| !! | TTTTGGACGATATGTTGGCT+GGG | - | chr4.2:6337494-6337513 | MS.gene72128:intron | 40.0% |
| ACAGGGAAGTCAGCTTATCA+TGG | + | chr4.2:6338399-6338418 | None:intergenic | 45.0% | |
| AGCCTGTGACCATTTGAAAG+AGG | + | chr4.2:6337574-6337593 | None:intergenic | 45.0% | |
| CAACCTCGCAGGATTATAAC+TGG | - | chr4.2:6337006-6337025 | MS.gene72128:intron | 45.0% | |
| CATACATGGATCTTCACCCT+TGG | + | chr4.2:6337325-6337344 | None:intergenic | 45.0% | |
| CCCTCTAACAATATCCTCCA+AGG | + | chr4.2:6336857-6336876 | None:intergenic | 45.0% | |
| CCCTTGGAGGATATTGTTAG+AGG | - | chr4.2:6336853-6336872 | MS.gene72128:intron | 45.0% | |
| CGCCTTTGTTCGTTTCAATG+GGG | - | chr4.2:6336626-6336645 | MS.gene72128:intron | 45.0% | |
| CTCCCCATTGAAACGAACAA+AGG | + | chr4.2:6336631-6336650 | None:intergenic | 45.0% | |
| CTCCTCTTTCAAATGGTCAC+AGG | - | chr4.2:6337569-6337588 | MS.gene72128:intron | 45.0% | |
| CTGTGACCATTTGAAAGAGG+AGG | + | chr4.2:6337571-6337590 | None:intergenic | 45.0% | |
| GAAATTTCCAGTATCCCAGC+AGG | + | chr4.2:6336760-6336779 | None:intergenic | 45.0% | |
| GAGGTGTGAGTTAATTGACG+AGG | - | chr4.2:6336903-6336922 | MS.gene72128:intron | 45.0% | |
| GCGCCTTTGTTCGTTTCAAT+GGG | - | chr4.2:6336625-6336644 | MS.gene72128:intron | 45.0% | |
| GGGATACTGGAAATTTCGTC+CGG | - | chr4.2:6336763-6336782 | MS.gene72128:CDS | 45.0% | |
| TAATACACCTGCTGGGATAC+TGG | - | chr4.2:6336750-6336769 | MS.gene72128:CDS | 45.0% | |
| TACATGGATCTTCACCCTTG+GGG | + | chr4.2:6337323-6337342 | None:intergenic | 45.0% | |
| TCAATTAACTCACACCTCCC+AGG | + | chr4.2:6336901-6336920 | None:intergenic | 45.0% | |
| TCCAACGCAAATGTCACAAC+AGG | + | chr4.2:6336664-6336683 | None:intergenic | 45.0% | |
| TCCCTGTACCCCTTAAATGT+TGG | - | chr4.2:6338412-6338431 | MS.gene72128:intron | 45.0% | |
| TCCTGTTGTGACATTTGCGT+TGG | - | chr4.2:6336660-6336679 | MS.gene72128:intron | 45.0% | |
| TGACGAGGAACAAGCATTTG+GGG | - | chr4.2:6336918-6336937 | MS.gene72128:intron | 45.0% | |
| TGCATGAAACTGAACGTTGG+TGG | + | chr4.2:6338338-6338357 | None:intergenic | 45.0% | |
| TGCGCCTTTGTTCGTTTCAA+TGG | - | chr4.2:6336624-6336643 | MS.gene72128:intron | 45.0% | |
| TTTCGTCCGGTTTACTAGGA+AGG | - | chr4.2:6336776-6336795 | MS.gene72128:CDS | 45.0% | |
| TTTGACTGCCAGTCTACACT+TGG | - | chr4.2:6338575-6338594 | MS.gene72128:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4.2:6338111-6338130 | MS.gene72128:intron | 45.0% |
| ! | ACAAGCATTTGGGGTCATAG+TGG | - | chr4.2:6336927-6336946 | MS.gene72128:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4.2:6338110-6338129 | MS.gene72128:intron | 45.0% |
| ! | CACTTTTATGTGCATGGTGC+AGG | - | chr4.2:6338751-6338770 | MS.gene72128:CDS | 45.0% |
| ! | TTTGGACGATATGTTGGCTG+GGG | - | chr4.2:6337495-6337514 | MS.gene72128:intron | 45.0% |
| !! | AAGAGGTTGATGCAGTTCCT+GGG | - | chr4.2:6336881-6336900 | MS.gene72128:intron | 45.0% |
| !! | CGAAGGCTAAGCTGTTTTCA+AGG | - | chr4.2:6336551-6336570 | MS.gene72128:intron | 45.0% |
| !! | GGCTAAGCTGTTTTCAAGGA+TGG | - | chr4.2:6336555-6336574 | MS.gene72128:intron | 45.0% |
| !! | GTGTTGGTTAATACACCTGC+TGG | - | chr4.2:6336742-6336761 | MS.gene72128:CDS | 45.0% |
| ACAACTTTCCTATGCCGCTC+AGG | + | chr4.2:6336586-6336605 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCAGCTTCA+TGG | - | chr4.2:6338123-6338142 | MS.gene72128:intron | 50.0% | |
| ATCTTCACCCTTGGGGTTGT+CGG | + | chr4.2:6337316-6337335 | None:intergenic | 50.0% | |
| ATGAAGCTGACCCCACTTAG+TGG | + | chr4.2:6338124-6338143 | None:intergenic | 50.0% | |
| ATTCTTGCTGCTGTGGCAGT+TGG | - | chr4.2:6336814-6336833 | MS.gene72128:CDS | 50.0% | |
| CAGCTACCCTCCTAATGTCA+TGG | + | chr4.2:6337603-6337622 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr4.2:6338112-6338131 | None:intergenic | 50.0% | |
| GGAAGAGGATAGAGATGCGA+AGG | - | chr4.2:6336534-6336553 | MS.gene72128:intron | 50.0% | |
| GTGCAGGTGATTGCTGGTAA+AGG | - | chr4.2:6338767-6338786 | MS.gene72128:CDS | 50.0% | |
| GTGCGAGCTTCAGTTGCAAT+GGG | - | chr4.2:6337622-6337641 | MS.gene72128:intron | 50.0% | |
| GTTGACGAGCTTCATCAAGC+TGG | - | chr4.2:6338869-6338888 | MS.gene72128:CDS | 50.0% | |
| TAAGAGAGCTTCAACCTCGC+AGG | - | chr4.2:6336995-6337014 | MS.gene72128:intron | 50.0% | |
| TGAAGCTGACCCCACTTAGT+GGG | + | chr4.2:6338123-6338142 | None:intergenic | 50.0% | |
| TGACCCCACTTAGTGGGATA+AGG | + | chr4.2:6338117-6338136 | None:intergenic | 50.0% | |
| TGCGAGCTTCAGTTGCAATG+GGG | - | chr4.2:6337623-6337642 | MS.gene72128:intron | 50.0% | |
| TGTGCGAGCTTCAGTTGCAA+TGG | - | chr4.2:6337621-6337640 | MS.gene72128:intron | 50.0% | |
| TTGCTGTGGTGAGGACGAAA+GGG | - | chr4.2:6337230-6337249 | MS.gene72128:intron | 50.0% | |
| ! | AGTGATTGGTTGCTGTGGTG+AGG | - | chr4.2:6337221-6337240 | MS.gene72128:intron | 50.0% |
| ! | ATATGTTGGCTGGGGTAGGA+TGG | - | chr4.2:6337503-6337522 | MS.gene72128:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4.2:6338109-6338128 | MS.gene72128:intron | 50.0% |
| ! | GAAACGAACAAAGGCGCACT+TGG | + | chr4.2:6336622-6336641 | None:intergenic | 50.0% |
| ! | GAGTTGGTCCAAGTGTAGAC+TGG | + | chr4.2:6338586-6338605 | None:intergenic | 50.0% |
| ! | TGGCAGTTGGCATTGCTGTT+GGG | - | chr4.2:6336827-6336846 | MS.gene72128:intron | 50.0% |
| !! | GAAGAGGTTGATGCAGTTCC+TGG | - | chr4.2:6336880-6336899 | MS.gene72128:intron | 50.0% |
| !! | GGGTCATAGTGGACTATGCT+CGG | - | chr4.2:6336938-6336957 | MS.gene72128:intron | 50.0% |
| AAGCCTCCCTGCACTCTTCT+CGG | + | chr4.2:6338841-6338860 | None:intergenic | 55.0% | |
| AGCTTCAGTTGCAATGGGGG+AGG | - | chr4.2:6337627-6337646 | MS.gene72128:intron | 55.0% | |
| CTGACATCCGACAACCCCAA+GGG | - | chr4.2:6337306-6337325 | MS.gene72128:intron | 55.0% | |
| GCGAGCTTCAGTTGCAATGG+GGG | - | chr4.2:6337624-6337643 | MS.gene72128:intron | 55.0% | |
| GTCTCTACAGTTGCGCGCAA+AGG | + | chr4.2:6338642-6338661 | None:intergenic | 55.0% | |
| GTGGCAGTTGGCATTGCTGT+TGG | - | chr4.2:6336826-6336845 | MS.gene72128:intron | 55.0% | |
| GTTGCTGTGGTGAGGACGAA+AGG | - | chr4.2:6337229-6337248 | MS.gene72128:intron | 55.0% | |
| TCAGTTGCAATGGGGGAGGA+GGG | - | chr4.2:6337631-6337650 | MS.gene72128:intron | 55.0% | |
| TGCATGGTGCAGGTGATTGC+TGG | - | chr4.2:6338761-6338780 | MS.gene72128:CDS | 55.0% | |
| TGCTGTGGTGAGGACGAAAG+GGG | - | chr4.2:6337231-6337250 | MS.gene72128:intron | 55.0% | |
| TTCAGTTGCAATGGGGGAGG+AGG | - | chr4.2:6337630-6337649 | MS.gene72128:intron | 55.0% | |
| ! | CGATGACCGAGAAGAGTGCA+GGG | - | chr4.2:6338832-6338851 | MS.gene72128:CDS | 55.0% |
| ! | GACGATATGTTGGCTGGGGT+AGG | - | chr4.2:6337499-6337518 | MS.gene72128:intron | 55.0% |
| ! | GGCAGTTGGCATTGCTGTTG+GGG | - | chr4.2:6336828-6336847 | MS.gene72128:intron | 55.0% |
| ! | TCGATGACCGAGAAGAGTGC+AGG | - | chr4.2:6338831-6338850 | MS.gene72128:CDS | 55.0% |
| !! | AGGTTGATGCAGTTCCTGGG+AGG | - | chr4.2:6336884-6336903 | MS.gene72128:intron | 55.0% |
| !! | CAAGGATGGTGGATCCTGAG+CGG | - | chr4.2:6336569-6336588 | MS.gene72128:intron | 55.0% |
| GCTGACATCCGACAACCCCA+AGG | - | chr4.2:6337305-6337324 | MS.gene72128:intron | 60.0% | |
| GCTGTGGTGAGGACGAAAGG+GGG | - | chr4.2:6337232-6337251 | MS.gene72128:intron | 60.0% | |
| GGATGAGGAGGACGAGGAAG+AGG | - | chr4.2:6336519-6336538 | MS.gene72128:intron | 60.0% | |
| GGGGTTGTCGGATGTCAGCA+TGG | + | chr4.2:6337304-6337323 | None:intergenic | 60.0% | |
| ! | CATTGCTGTTGGGGCACCCT+TGG | - | chr4.2:6336837-6336856 | MS.gene72128:intron | 60.0% |
| ! | TGACCGAGAAGAGTGCAGGG+AGG | - | chr4.2:6338835-6338854 | MS.gene72128:CDS | 60.0% |
| ! | TGGTGGATCCTGAGCGGCAT+AGG | - | chr4.2:6336575-6336594 | MS.gene72128:intron | 60.0% |
| ! | TGCTGTTGGGGCACCCTTGG+AGG | - | chr4.2:6336840-6336859 | MS.gene72128:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 6336517 | 6339091 | 6336517 | ID=MS.gene72128 |
| chr4.2 | mRNA | 6336517 | 6339091 | 6336517 | ID=MS.gene72128.t1;Parent=MS.gene72128 |
| chr4.2 | exon | 6338581 | 6339091 | 6338581 | ID=MS.gene72128.t1.exon1;Parent=MS.gene72128.t1 |
| chr4.2 | CDS | 6338581 | 6339091 | 6338581 | ID=cds.MS.gene72128.t1;Parent=MS.gene72128.t1 |
| chr4.2 | exon | 6338269 | 6338385 | 6338269 | ID=MS.gene72128.t1.exon2;Parent=MS.gene72128.t1 |
| chr4.2 | CDS | 6338269 | 6338385 | 6338269 | ID=cds.MS.gene72128.t1;Parent=MS.gene72128.t1 |
| chr4.2 | exon | 6337945 | 6338120 | 6337945 | ID=MS.gene72128.t1.exon3;Parent=MS.gene72128.t1 |
| chr4.2 | CDS | 6337945 | 6338120 | 6337945 | ID=cds.MS.gene72128.t1;Parent=MS.gene72128.t1 |
| chr4.2 | exon | 6336690 | 6336835 | 6336690 | ID=MS.gene72128.t1.exon4;Parent=MS.gene72128.t1 |
| chr4.2 | CDS | 6336690 | 6336835 | 6336690 | ID=cds.MS.gene72128.t1;Parent=MS.gene72128.t1 |
| chr4.2 | exon | 6336517 | 6336535 | 6336517 | ID=MS.gene72128.t1.exon5;Parent=MS.gene72128.t1 |
| chr4.2 | CDS | 6336517 | 6336535 | 6336517 | ID=cds.MS.gene72128.t1;Parent=MS.gene72128.t1 |
| Gene Sequence |
| Protein sequence |
