Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062621.t1 | XP_024641995.1 | 92.7 | 799 | 53 | 4 | 1 | 796 | 7 | 803 | 0.00E+00 | 1239.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062621.t1 | Q8IWB9 | 22.5 | 316 | 212 | 5 | 348 | 644 | 825 | 1126 | 9.8e-19 | 97.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062621.t1 | A0A396HHW7 | 92.7 | 799 | 53 | 4 | 1 | 796 | 7 | 803 | 0.0e+00 | 1239.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049396 | MS.gene062621 | 0.867207 | 1.62E-65 | -1.69E-46 |
| MS.gene050868 | MS.gene062621 | 0.801598 | 8.35E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene062621 | 0.805736 | 1.16E-49 | -1.69E-46 |
| MS.gene051734 | MS.gene062621 | 0.82206 | 2.90E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene062621 | 0.817718 | 2.85E-52 | -1.69E-46 |
| MS.gene052414 | MS.gene062621 | 0.834812 | 2.41E-56 | -1.69E-46 |
| MS.gene053449 | MS.gene062621 | 0.810097 | 1.37E-50 | -1.69E-46 |
| MS.gene053505 | MS.gene062621 | 0.809097 | 2.24E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene062621 | 0.806989 | 6.29E-50 | -1.69E-46 |
| MS.gene053626 | MS.gene062621 | 0.835884 | 1.29E-56 | -1.69E-46 |
| MS.gene053633 | MS.gene062621 | 0.800904 | 1.16E-48 | -1.69E-46 |
| MS.gene053912 | MS.gene062621 | 0.8152 | 1.04E-51 | -1.69E-46 |
| MS.gene054003 | MS.gene062621 | 0.863864 | 1.84E-64 | -1.69E-46 |
| MS.gene054486 | MS.gene062621 | 0.803828 | 2.89E-49 | -1.69E-46 |
| MS.gene055486 | MS.gene062621 | 0.80212 | 6.52E-49 | -1.69E-46 |
| MS.gene055909 | MS.gene062621 | 0.831886 | 1.29E-55 | -1.69E-46 |
| MS.gene055911 | MS.gene062621 | 0.828351 | 9.44E-55 | -1.69E-46 |
| MS.gene056166 | MS.gene062621 | 0.871561 | 6.22E-67 | -1.69E-46 |
| MS.gene056387 | MS.gene062621 | 0.823399 | 1.41E-53 | -1.69E-46 |
| MS.gene056422 | MS.gene062621 | 0.845827 | 3.18E-59 | -1.69E-46 |
| MS.gene056448 | MS.gene062621 | 0.827545 | 1.47E-54 | -1.69E-46 |
| MS.gene056511 | MS.gene062621 | 0.842907 | 1.94E-58 | -1.69E-46 |
| MS.gene057076 | MS.gene062621 | 0.800414 | 1.46E-48 | -1.69E-46 |
| MS.gene057086 | MS.gene062621 | 0.823976 | 1.04E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene062621 | 0.844468 | 7.42E-59 | -1.69E-46 |
| MS.gene057856 | MS.gene062621 | 0.810405 | 1.17E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene062621 | 0.817647 | 2.96E-52 | -1.69E-46 |
| MS.gene058120 | MS.gene062621 | 0.806785 | 6.95E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene062621 | 0.801586 | 8.39E-49 | -1.69E-46 |
| MS.gene058376 | MS.gene062621 | 0.802271 | 6.07E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene062621 | 0.804531 | 2.07E-49 | -1.69E-46 |
| MS.gene059368 | MS.gene062621 | 0.817021 | 4.09E-52 | -1.69E-46 |
| MS.gene059455 | MS.gene062621 | 0.80454 | 2.06E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene062621 | 0.807308 | 5.39E-50 | -1.69E-46 |
| MS.gene059674 | MS.gene062621 | 0.800985 | 1.11E-48 | -1.69E-46 |
| MS.gene059807 | MS.gene062621 | 0.818614 | 1.79E-52 | -1.69E-46 |
| MS.gene05995 | MS.gene062621 | 0.825856 | 3.73E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene062621 | 0.80643 | 8.26E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene062621 | 0.843465 | 1.38E-58 | -1.69E-46 |
| MS.gene06097 | MS.gene062621 | 0.844543 | 7.08E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062621.t1 | MTR_6g066300 | 93.681 | 728 | 41 | 4 | 72 | 796 | 23 | 748 | 0.0 | 1344 |
| MS.gene062621.t1 | MTR_1g077470 | 57.143 | 812 | 284 | 15 | 5 | 791 | 8 | 780 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062621.t1 | AT1G17820 | 43.510 | 832 | 371 | 21 | 4 | 791 | 8 | 784 | 0.0 | 616 |
| MS.gene062621.t1 | AT1G73200 | 44.596 | 805 | 375 | 23 | 6 | 791 | 9 | 761 | 0.0 | 610 |
Find 160 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCCTACGCTTTCACTATT+TGG | 0.123258 | 6.4:-47063152 | None:intergenic |
| GTTTCTTTGTTGATCCTATT+TGG | 0.174421 | 6.4:+47057640 | MS.gene062621:CDS |
| TTCCTATCACTTTGGCAATA+AGG | 0.235656 | 6.4:+47062430 | MS.gene062621:CDS |
| GTTTCTCCTGTTAGGAAGTA+TGG | 0.286219 | 6.4:+47058910 | MS.gene062621:CDS |
| GAGGTTGACATCGAATATTC+TGG | 0.288180 | 6.4:+47061149 | MS.gene062621:CDS |
| TGTTGGCCACTTTCTAATAA+AGG | 0.289373 | 6.4:-47063479 | None:intergenic |
| TGCCTACGCTTTCACTATTT+GGG | 0.314845 | 6.4:-47063151 | None:intergenic |
| TCTTCTGCAGGCAGCAATTC+GGG | 0.315263 | 6.4:+47063115 | MS.gene062621:intron |
| GGTTTCTTCAGGGTGTAGTT+TGG | 0.316306 | 6.4:+47058806 | MS.gene062621:intron |
| GTTGTTGCTGCGGAATTTCT+TGG | 0.326725 | 6.4:+47057685 | MS.gene062621:CDS |
| TCCTATCACTTTGGCAATAA+GGG | 0.326907 | 6.4:+47062431 | MS.gene062621:CDS |
| CTCTTCTGCAGGCAGCAATT+CGG | 0.329201 | 6.4:+47063114 | MS.gene062621:intron |
| CTTTCACTCCACCAGAAGTT+TGG | 0.329291 | 6.4:-47063289 | None:intergenic |
| AATCACTAGTTTCTTGTTGT+TGG | 0.332638 | 6.4:-47063496 | None:intergenic |
| GTTTCTTCAGGGTGTAGTTT+GGG | 0.335417 | 6.4:+47058807 | MS.gene062621:intron |
| GTCAATCAGTTCGGCTCAAC+AGG | 0.346017 | 6.4:+47063628 | MS.gene062621:CDS |
| ATATGGATCAACCAAGAATC+TGG | 0.349308 | 6.4:+47063230 | MS.gene062621:CDS |
| ATATTACCATACTTCCTAAC+AGG | 0.354920 | 6.4:-47058916 | None:intergenic |
| AAGTTTCATTCCCAGATTCT+TGG | 0.360415 | 6.4:-47063241 | None:intergenic |
| GATAGCAATAACCAAACTTC+TGG | 0.364101 | 6.4:+47063278 | MS.gene062621:CDS |
| TGCTTGAGAATCTGATTTCC+TGG | 0.365550 | 6.4:-47063390 | None:intergenic |
| ATATTCTGGAAGTGCAATAT+TGG | 0.369791 | 6.4:+47061163 | MS.gene062621:CDS |
| CGGAATTTCTTGGTTTCTTG+TGG | 0.374888 | 6.4:+47057695 | MS.gene062621:CDS |
| TGATGGAGCATCGTCTGATA+TGG | 0.377589 | 6.4:-47060112 | None:intergenic |
| GAGTATTTAGATAAGCAATT+AGG | 0.382026 | 6.4:+47061287 | MS.gene062621:CDS |
| GTTTGGTTATTGCTATCAAT+TGG | 0.383830 | 6.4:-47063272 | None:intergenic |
| TCCAAGTTGAAGTCTATATC+AGG | 0.387688 | 6.4:-47062534 | None:intergenic |
| TTGCTTTGTTCCTGATCAAC+CGG | 0.388432 | 6.4:+47062595 | MS.gene062621:CDS |
| GGAATGTTGCACCTTTCATA+TGG | 0.397009 | 6.4:+47063213 | MS.gene062621:CDS |
| TCTGACACCGATGAAAAGTT+TGG | 0.400358 | 6.4:+47060189 | MS.gene062621:CDS |
| TCATCATCCCTGTCTCGTTC+AGG | 0.402009 | 6.4:+47060141 | MS.gene062621:CDS |
| GTACCTTGAGCCGGTTGATC+AGG | 0.405477 | 6.4:-47062605 | None:intergenic |
| AACCCTCATCCCAATGATAC+AGG | 0.410476 | 6.4:-47061093 | None:intergenic |
| GAAGGTTTCAAAGTACTTTG+TGG | 0.414855 | 6.4:+47058843 | MS.gene062621:CDS |
| AATGTTCCACCCTGTATCAT+TGG | 0.416971 | 6.4:+47061083 | MS.gene062621:CDS |
| AAGTACTTTGAAACCTTCTC+TGG | 0.419257 | 6.4:-47058838 | None:intergenic |
| TTCCAGTCACCATCTTCTTT+AGG | 0.420994 | 6.4:-47061341 | None:intergenic |
| ATCCGTGCAAGAGAGAATTC+AGG | 0.424667 | 6.4:+47060293 | MS.gene062621:CDS |
| TCAAAAGGTTCCTATCACTT+TGG | 0.424731 | 6.4:+47062422 | MS.gene062621:intron |
| ACCCGATCAAAGTGGAAAAC+AGG | 0.425455 | 6.4:+47059647 | MS.gene062621:CDS |
| AAAGAAAACTGAGAAACTTC+GGG | 0.426927 | 6.4:+47060020 | MS.gene062621:CDS |
| TCTTCTCTTCGCTAGCTTCG+TGG | 0.432629 | 6.4:-47063553 | None:intergenic |
| TGAGAATCTGATTTCCTGGC+TGG | 0.433212 | 6.4:-47063386 | None:intergenic |
| GATCATCAAAAGAGGTGAAA+AGG | 0.439984 | 6.4:+47058869 | MS.gene062621:CDS |
| CACCCTGTATCATTGGGATG+AGG | 0.441486 | 6.4:+47061090 | MS.gene062621:CDS |
| ACAAGAAACTAGTGATTTGA+AGG | 0.442278 | 6.4:+47063502 | MS.gene062621:CDS |
| TTTGGCTTCCTGAACGAGAC+AGG | 0.442494 | 6.4:-47060149 | None:intergenic |
| ACCCTTATTGCCAAAGTGAT+AGG | 0.448457 | 6.4:-47062432 | None:intergenic |
| AAGATCTTCCCGAGTTGGCT+TGG | 0.457101 | 6.4:+47059960 | MS.gene062621:CDS |
| AAAACGCAGTGTCCCTCTTA+GGG | 0.459266 | 6.4:-47062460 | None:intergenic |
| ATGGTGTAAGGCCCTCCGTT+TGG | 0.460478 | 6.4:+47059738 | MS.gene062621:CDS |
| ATCCCGTGTCGAACAATGTT+GGG | 0.460921 | 6.4:+47061234 | MS.gene062621:CDS |
| GAAGATGGTGACTGGAACAA+TGG | 0.463083 | 6.4:+47061347 | MS.gene062621:CDS |
| TTCAACTTGGAATCATCTGT+TGG | 0.464203 | 6.4:+47062546 | MS.gene062621:CDS |
| TCAAAACCTTTATTAGAAAG+TGG | 0.472444 | 6.4:+47063473 | MS.gene062621:CDS |
| TCGTGGTCACTTTCTAATGA+AGG | 0.474003 | 6.4:-47063536 | None:intergenic |
| CACAGTTGATCGGCGGGTGG+CGG | 0.475158 | 6.4:-47062492 | None:intergenic |
| AAAAGAAAACTGAGAAACTT+CGG | 0.476046 | 6.4:+47060019 | MS.gene062621:CDS |
| GAACAAAGCAATGCGCGTAT+TGG | 0.482320 | 6.4:-47062583 | None:intergenic |
| ATGTTCCACCCTGTATCATT+GGG | 0.484097 | 6.4:+47061084 | MS.gene062621:CDS |
| AATGCACCTTCCTCGACTCC+TGG | 0.486513 | 6.4:+47061957 | MS.gene062621:CDS |
| TTGATGAGGGAACATTATGT+TGG | 0.486865 | 6.4:+47060214 | MS.gene062621:CDS |
| TGAGAAAGAGGCATGGTGTA+AGG | 0.488123 | 6.4:+47059726 | MS.gene062621:CDS |
| CTTGTTCTCACTGAGCCTGA+TGG | 0.489817 | 6.4:+47058952 | MS.gene062621:CDS |
| CTTGCAACTGCGAATACCAT+TGG | 0.496512 | 6.4:-47059786 | None:intergenic |
| ATAGATTTCCATCTTGATCC+AGG | 0.497314 | 6.4:-47061975 | None:intergenic |
| ACCCTGTATCATTGGGATGA+GGG | 0.499379 | 6.4:+47061091 | MS.gene062621:CDS |
| AAATCTTGAATAATATCTGA+TGG | 0.502351 | 6.4:-47061263 | None:intergenic |
| GAGTTGGCTTGGATAACAAA+TGG | 0.506671 | 6.4:+47059971 | MS.gene062621:CDS |
| AGTTGGTGAGCTAGAGAAAG+AGG | 0.506751 | 6.4:+47061205 | MS.gene062621:CDS |
| TGAGACTTCGTCTGAGAAAG+AGG | 0.510698 | 6.4:+47059714 | MS.gene062621:CDS |
| ATGGTTGTATGCGATCCATC+AGG | 0.512009 | 6.4:-47058967 | None:intergenic |
| CGAATAGTGCAGTGATGGAT+AGG | 0.514333 | 6.4:+47063606 | MS.gene062621:CDS |
| TCGTCTGATATGGAACTTCT+CGG | 0.515623 | 6.4:-47060102 | None:intergenic |
| TGTTGCCAAGCATGTTTCAC+AGG | 0.516906 | 6.4:+47062007 | MS.gene062621:CDS |
| ACGAGAAGATCTTCCCGAGT+TGG | 0.518906 | 6.4:+47059955 | MS.gene062621:CDS |
| TGGGATGAGGGTTCTTCCGA+TGG | 0.522231 | 6.4:+47061103 | MS.gene062621:CDS |
| AACAAATGGACTTCATTCTC+AGG | 0.522529 | 6.4:+47059985 | MS.gene062621:CDS |
| GAAAAGTTTGGTATTGATGA+GGG | 0.526720 | 6.4:+47060201 | MS.gene062621:CDS |
| GATGGATAGGTCAATCAGTT+CGG | 0.532955 | 6.4:+47063619 | MS.gene062621:CDS |
| TGGTTATTGCTATCAATTGG+AGG | 0.536308 | 6.4:-47063269 | None:intergenic |
| GTTCCTGATCAACCGGCTCA+AGG | 0.539141 | 6.4:+47062602 | MS.gene062621:CDS |
| CGAAGCTAGCGAAGAGAAGA+CGG | 0.539187 | 6.4:+47063556 | MS.gene062621:CDS |
| AGCCTAAAGAAGATGGTGAC+TGG | 0.540848 | 6.4:+47061339 | MS.gene062621:CDS |
| AACCTGAATTCTCTCTTGCA+CGG | 0.542748 | 6.4:-47060295 | None:intergenic |
| AAGTGTTGAGGCAATAGAAA+GGG | 0.545264 | 6.4:+47059879 | MS.gene062621:CDS |
| GAACTATTTGTACCTTGAGC+CGG | 0.545514 | 6.4:-47062614 | None:intergenic |
| AGCAATAACCAAACTTCTGG+TGG | 0.546655 | 6.4:+47063281 | MS.gene062621:CDS |
| AATCCCGTGTCGAACAATGT+TGG | 0.546792 | 6.4:+47061233 | MS.gene062621:CDS |
| CCATACCACAGTTGATCGGC+GGG | 0.547019 | 6.4:-47062498 | None:intergenic |
| ATAAGGGTAGCATCCCTAAG+AGG | 0.547041 | 6.4:+47062447 | MS.gene062621:CDS |
| TATGGATCAACCAAGAATCT+GGG | 0.548472 | 6.4:+47063231 | MS.gene062621:CDS |
| TGAAAAGTTTGGTATTGATG+AGG | 0.549156 | 6.4:+47060200 | MS.gene062621:CDS |
| AGGAAGTATGGTAATATCAA+AGG | 0.551644 | 6.4:+47058922 | MS.gene062621:CDS |
| TTTCATCACATGAGGCCAAA+CGG | 0.552918 | 6.4:-47059753 | None:intergenic |
| TCAACACTTAATCCTACTGT+TGG | 0.555166 | 6.4:-47059865 | None:intergenic |
| CCCGCCGATCAACTGTGGTA+TGG | 0.556456 | 6.4:+47062498 | MS.gene062621:CDS |
| TAAGTGTTGAGGCAATAGAA+AGG | 0.556870 | 6.4:+47059878 | MS.gene062621:CDS |
| CCTCGACTCCTGGATCAAGA+TGG | 0.559242 | 6.4:+47061967 | MS.gene062621:CDS |
| GCCTGATATAGACTTCAACT+TGG | 0.559696 | 6.4:+47062533 | MS.gene062621:CDS |
| GATGCATCCTTTGAGCTGAA+TGG | 0.566318 | 6.4:-47058986 | None:intergenic |
| TTTGTTATCCAAGCCAACTC+GGG | 0.567675 | 6.4:-47059968 | None:intergenic |
| AAAGCTAGTGCAAAGACCTC+AGG | 0.569315 | 6.4:+47063308 | MS.gene062621:CDS |
| ACGACATCACCGACATATGC+GGG | 0.570605 | 6.4:-47061038 | None:intergenic |
| AACTAGTACTACGATCAAGT+TGG | 0.571521 | 6.4:-47057780 | None:intergenic |
| TCGCAAGAGCCTAAAGAAGA+TGG | 0.571853 | 6.4:+47061332 | MS.gene062621:CDS |
| GCCTTCGAATAGTGCAGTGA+TGG | 0.573192 | 6.4:+47063601 | MS.gene062621:CDS |
| ATTGAAACAAGGCTAGAAGT+TGG | 0.573990 | 6.4:+47061188 | MS.gene062621:CDS |
| AATGAGCGAGGTATGTGCCT+TGG | 0.574392 | 6.4:+47061127 | MS.gene062621:CDS |
| AATCGAGACAAGATCCAGCC+AGG | 0.576251 | 6.4:+47063372 | MS.gene062621:CDS |
| TAGTGGCTAAAACTGCATCT+TGG | 0.576575 | 6.4:-47060047 | None:intergenic |
| TGTGGAAAGATCATCAAAAG+AGG | 0.580766 | 6.4:+47058861 | MS.gene062621:CDS |
| GAGCGAGGTATGTGCCTTGG+AGG | 0.581153 | 6.4:+47061130 | MS.gene062621:CDS |
| AATAGAAAGGGCTACTAAGA+CGG | 0.581906 | 6.4:+47059891 | MS.gene062621:CDS |
| GAAAGGGCTACTAAGACGGA+TGG | 0.583377 | 6.4:+47059895 | MS.gene062621:CDS |
| GACGACATCACCGACATATG+CGG | 0.584649 | 6.4:-47061039 | None:intergenic |
| ATTTGTTATCCAAGCCAACT+CGG | 0.586001 | 6.4:-47059969 | None:intergenic |
| CATACAACCATTCAGCTCAA+AGG | 0.586848 | 6.4:+47058979 | MS.gene062621:CDS |
| AATCTTGAATAATATCTGAT+GGG | 0.586921 | 6.4:-47061262 | None:intergenic |
| CGTCTGTACAGATATCAACA+TGG | 0.587148 | 6.4:+47061058 | MS.gene062621:CDS |
| GTGAAAGCGTAGGCATTCGA+TGG | 0.590183 | 6.4:+47063159 | MS.gene062621:CDS |
| TCCATCACTGCACTATTCGA+AGG | 0.590384 | 6.4:-47063602 | None:intergenic |
| GACCCAACATTGTTCGACAC+GGG | 0.595452 | 6.4:-47061236 | None:intergenic |
| GTCTGTACAGATATCAACAT+GGG | 0.598911 | 6.4:+47061059 | MS.gene062621:CDS |
| CCATCTTGATCCAGGAGTCG+AGG | 0.603336 | 6.4:-47061967 | None:intergenic |
| CGCCACCCGCCGATCAACTG+TGG | 0.603692 | 6.4:+47062493 | MS.gene062621:CDS |
| TTGGCTTCCTGAACGAGACA+GGG | 0.604129 | 6.4:-47060148 | None:intergenic |
| ATCACATGAGGCCAAACGGA+GGG | 0.605249 | 6.4:-47059749 | None:intergenic |
| ATGAGAACTCCCGCATATGT+CGG | 0.606647 | 6.4:+47061029 | MS.gene062621:CDS |
| TCTTGGTTGATCCATATGAA+AGG | 0.609363 | 6.4:-47063224 | None:intergenic |
| CTTGATCCAGGAGTCGAGGA+AGG | 0.609556 | 6.4:-47061963 | None:intergenic |
| ATGAAAGGTGCAACATTCCG+AGG | 0.610005 | 6.4:-47063209 | None:intergenic |
| TAAGGGTAGCATCCCTAAGA+GGG | 0.611091 | 6.4:+47062448 | MS.gene062621:CDS |
| ATATTCGATGTCAACCTCCA+AGG | 0.613501 | 6.4:-47061144 | None:intergenic |
| GGATCCTTAAACGACTTCGT+AGG | 0.614448 | 6.4:+47057716 | MS.gene062621:CDS |
| GACGGATGGATCTTCCTCAA+AGG | 0.621067 | 6.4:+47059909 | MS.gene062621:CDS |
| AACAGTAGGATTAAGTGTTG+AGG | 0.624183 | 6.4:+47059867 | MS.gene062621:CDS |
| CAATATTGGAGATTGAAACA+AGG | 0.629662 | 6.4:+47061177 | MS.gene062621:CDS |
| CATACCTCGCTCATTTCCAT+CGG | 0.629923 | 6.4:-47061119 | None:intergenic |
| GAAACCATACCACAGTTGAT+CGG | 0.632911 | 6.4:-47062502 | None:intergenic |
| AGGGATGATGATGATAGTGA+TGG | 0.634372 | 6.4:-47060129 | None:intergenic |
| ACCCTCATCCCAATGATACA+GGG | 0.634983 | 6.4:-47061092 | None:intergenic |
| ACCATACCACAGTTGATCGG+CGG | 0.637112 | 6.4:-47062499 | None:intergenic |
| AAGCAATTAGGTCTTGCAGA+AGG | 0.637792 | 6.4:+47061299 | MS.gene062621:CDS |
| GTTGGTGAGCTAGAGAAAGA+GGG | 0.642446 | 6.4:+47061206 | MS.gene062621:CDS |
| AGGACCTCTGTGATATACCA+TGG | 0.648055 | 6.4:+47059667 | MS.gene062621:CDS |
| CGGTTCTGGACTATCACCTG+AGG | 0.654907 | 6.4:-47063324 | None:intergenic |
| TGTTATTGTTGTTGTTGCTG+CGG | 0.657967 | 6.4:+47057675 | MS.gene062621:CDS |
| AGACCCAACATTGTTCGACA+CGG | 0.659175 | 6.4:-47061237 | None:intergenic |
| TACCACAGTTGATCGGCGGG+TGG | 0.667424 | 6.4:-47062495 | None:intergenic |
| CATCACATGAGGCCAAACGG+AGG | 0.674711 | 6.4:-47059750 | None:intergenic |
| CTTCGTCTGAGAAAGAGGCA+TGG | 0.679779 | 6.4:+47059719 | MS.gene062621:CDS |
| TGGTACCTGTGAAACATGCT+TGG | 0.690113 | 6.4:-47062012 | None:intergenic |
| ATATGCGGGAGTTCTCATGT+TGG | 0.690179 | 6.4:-47061024 | None:intergenic |
| CTCCCAAATAGTGAAAGCGT+AGG | 0.693841 | 6.4:+47063149 | MS.gene062621:CDS |
| CTCATCCCAATGATACAGGG+TGG | 0.698539 | 6.4:-47061089 | None:intergenic |
| GCTTCCATGGTATATCACAG+AGG | 0.709584 | 6.4:-47059671 | None:intergenic |
| TCTTCCGATGGAAATGAGCG+AGG | 0.715274 | 6.4:+47061115 | MS.gene062621:CDS |
| AGGCATTCGATGGATGCTAG+CGG | 0.718095 | 6.4:+47063169 | MS.gene062621:CDS |
| TCTGTACAGATATCAACATG+GGG | 0.718675 | 6.4:+47061060 | MS.gene062621:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTATTAAGAAATATTTA+GGG | + | chr6.4:47058499-47058518 | MS.gene062621:intron | 10.0% |
| !! | ACAAAAATTCAAAAAAAAAA+AGG | - | chr6.4:47057872-47057891 | None:intergenic | 10.0% |
| !!! | ATATAAGTTATATAATTTTC+AGG | + | chr6.4:47060573-47060592 | MS.gene062621:intron | 10.0% |
| !!! | GTGTTTATTTATTTATTTTT+TGG | - | chr6.4:47062202-47062221 | None:intergenic | 10.0% |
| !!! | GTTTATTTATTTATTTTTTG+GGG | - | chr6.4:47062200-47062219 | None:intergenic | 10.0% |
| !!! | TTTATTTATTTATTTTTTGG+GGG | - | chr6.4:47062199-47062218 | None:intergenic | 10.0% |
| !!! | TTTTAATTTGTGATATTTTA+AGG | + | chr6.4:47059144-47059163 | MS.gene062621:intron | 10.0% |
| !!! | TTTTGAAATTTATAATCTAT+AGG | - | chr6.4:47061822-47061841 | None:intergenic | 10.0% |
| !! | AAAATATAATATGATGCTAT+AGG | - | chr6.4:47061722-47061741 | None:intergenic | 15.0% |
| !! | ATAGCTTATAAAAAAATAGT+CGG | - | chr6.4:47062812-47062831 | None:intergenic | 15.0% |
| !! | GAAACTATTAAGAAATATTT+AGG | + | chr6.4:47058498-47058517 | MS.gene062621:intron | 15.0% |
| !! | GATATAATATTCTAAATCTA+GGG | - | chr6.4:47060487-47060506 | None:intergenic | 15.0% |
| !! | TTAAATTGATATTAGTACTT+AGG | + | chr6.4:47060447-47060466 | MS.gene062621:intron | 15.0% |
| !! | TTTAAGAAAAAAAATCTTTG+GGG | + | chr6.4:47063020-47063039 | MS.gene062621:intron | 15.0% |
| !!! | AAAAAAAAAAAGGATTTTTG+TGG | - | chr6.4:47057862-47057881 | None:intergenic | 15.0% |
| !!! | ACTTTAAGAAAAAAAATCTT+TGG | + | chr6.4:47063018-47063037 | MS.gene062621:intron | 15.0% |
| !!! | CTTTAAGAAAAAAAATCTTT+GGG | + | chr6.4:47063019-47063038 | MS.gene062621:intron | 15.0% |
| !!! | GAATATTAGTTTTAGTTATT+TGG | + | chr6.4:47059190-47059209 | MS.gene062621:intron | 15.0% |
| !!! | TAATTTTTTTCAAAAACTGA+CGG | - | chr6.4:47059936-47059955 | None:intergenic | 15.0% |
| !!! | TTATTTATTTATTTTTTGGG+GGG | - | chr6.4:47062198-47062217 | None:intergenic | 15.0% |
| !!! | TTGAAAACTTTATTTTGTTA+TGG | + | chr6.4:47060962-47060981 | MS.gene062621:intron | 15.0% |
| !! | AAATCTTGAATAATATCTGA+TGG | - | chr6.4:47061266-47061285 | None:intergenic | 20.0% |
| !! | AATCTTGAATAATATCTGAT+GGG | - | chr6.4:47061265-47061284 | None:intergenic | 20.0% |
| !! | ATAAAAATTAAGTTTGCAAG+TGG | - | chr6.4:47063092-47063111 | None:intergenic | 20.0% |
| !! | ATATACTTATGTTATCTTAG+TGG | - | chr6.4:47058154-47058173 | None:intergenic | 20.0% |
| !! | ATCTTCTACATTTGAATTAA+TGG | + | chr6.4:47060606-47060625 | MS.gene062621:intron | 20.0% |
| !! | ATTAGCTATTTATAACTTCA+TGG | - | chr6.4:47062366-47062385 | None:intergenic | 20.0% |
| !! | ATTCTTAATAATGAAAGAAC+GGG | - | chr6.4:47062082-47062101 | None:intergenic | 20.0% |
| !! | GATTCTTAATAATGAAAGAA+CGG | - | chr6.4:47062083-47062102 | None:intergenic | 20.0% |
| !! | GGATATAATATTCTAAATCT+AGG | - | chr6.4:47060488-47060507 | None:intergenic | 20.0% |
| !! | GTAGTTTATCTAAATAAACA+AGG | - | chr6.4:47062735-47062754 | None:intergenic | 20.0% |
| !! | TAAAAATTAAGTTTGCAAGT+GGG | - | chr6.4:47063091-47063110 | None:intergenic | 20.0% |
| !! | TATATACTTATGTCATTAAG+TGG | - | chr6.4:47058298-47058317 | None:intergenic | 20.0% |
| !! | TCTATGTATAGTAGAAAATA+GGG | + | chr6.4:47058369-47058388 | MS.gene062621:intron | 20.0% |
| !! | TGTCATACTTAATATGATTA+TGG | + | chr6.4:47059527-47059546 | MS.gene062621:intron | 20.0% |
| !! | TTATAATCTATAGGAAAACA+AGG | - | chr6.4:47061813-47061832 | None:intergenic | 20.0% |
| !! | TTCTATGTATAGTAGAAAAT+AGG | + | chr6.4:47058368-47058387 | MS.gene062621:intron | 20.0% |
| !! | TTTCATAACTTAACGAAAAA+GGG | - | chr6.4:47062639-47062658 | None:intergenic | 20.0% |
| !!! | AAATAACGATTTGTTCAAAT+TGG | + | chr6.4:47060770-47060789 | MS.gene062621:intron | 20.0% |
| !!! | ATTATTTAGCTTAACACATT+AGG | + | chr6.4:47060547-47060566 | MS.gene062621:intron | 20.0% |
| !!! | ATTGTTTTATTCCACAAATA+TGG | - | chr6.4:47061588-47061607 | None:intergenic | 20.0% |
| !!! | GATTTGCAATGAATTTTATA+GGG | + | chr6.4:47059615-47059634 | MS.gene062621:intron | 20.0% |
| !!! | TATTTTAAGGTTGATTTCTT+TGG | + | chr6.4:47059157-47059176 | MS.gene062621:intron | 20.0% |
| !!! | TCTTTTTCATAGATTAAACA+AGG | - | chr6.4:47062706-47062725 | None:intergenic | 20.0% |
| !!! | TGACTTTGTTTATTATCAAA+AGG | + | chr6.4:47062407-47062426 | MS.gene062621:intron | 20.0% |
| !!! | TGATTTGCAATGAATTTTAT+AGG | + | chr6.4:47059614-47059633 | MS.gene062621:intron | 20.0% |
| ! | AAAAAATTGGAAAAAGGGAA+AGG | + | chr6.4:47063666-47063685 | MS.gene062621:CDS | 25.0% |
| ! | AAAAGAAAACTGAGAAACTT+CGG | + | chr6.4:47060019-47060038 | MS.gene062621:CDS | 25.0% |
| ! | AACATGTTATCTCTTTCTTT+AGG | - | chr6.4:47059489-47059508 | None:intergenic | 25.0% |
| ! | AACATTAGCAATTTAACTAC+TGG | + | chr6.4:47060650-47060669 | MS.gene062621:intron | 25.0% |
| ! | ATAAAACAATTCACATGTCT+TGG | + | chr6.4:47061598-47061617 | MS.gene062621:intron | 25.0% |
| ! | ATAAATAAACACGAACTTGT+AGG | + | chr6.4:47062210-47062229 | MS.gene062621:intron | 25.0% |
| ! | ATATAATATGATGCTATAGG+TGG | - | chr6.4:47061719-47061738 | None:intergenic | 25.0% |
| ! | ATCTACTTATGTTATCTTAG+TGG | - | chr6.4:47058683-47058702 | None:intergenic | 25.0% |
| ! | ATTGTTCATGTCATTGATAT+TGG | + | chr6.4:47058766-47058785 | MS.gene062621:intron | 25.0% |
| ! | CTTTCATAACTTAACGAAAA+AGG | - | chr6.4:47062640-47062659 | None:intergenic | 25.0% |
| ! | CTTTGATATCAAAAAAGAGT+CGG | - | chr6.4:47060254-47060273 | None:intergenic | 25.0% |
| ! | GAGTATTTAGATAAGCAATT+AGG | + | chr6.4:47061287-47061306 | MS.gene062621:CDS | 25.0% |
| ! | GTCAAATTAACCAAGTAATT+GGG | + | chr6.4:47059279-47059298 | MS.gene062621:intron | 25.0% |
| ! | GTTTCTCTTATAGTTATTCT+AGG | - | chr6.4:47058483-47058502 | None:intergenic | 25.0% |
| ! | TAGAAAATAGGGTAGAAAAT+AGG | + | chr6.4:47058380-47058399 | MS.gene062621:intron | 25.0% |
| ! | TAGAAGAAGCCAAAAAAAAT+TGG | + | chr6.4:47063735-47063754 | MS.gene062621:CDS | 25.0% |
| ! | TCAAAACCTTTATTAGAAAG+TGG | + | chr6.4:47063473-47063492 | MS.gene062621:CDS | 25.0% |
| ! | TCAAATAAACCAATTCAAAC+AGG | + | chr6.4:47062946-47062965 | MS.gene062621:intron | 25.0% |
| ! | TCAACTGCATAAATTCATAT+AGG | - | chr6.4:47060330-47060349 | None:intergenic | 25.0% |
| ! | TCATCAATCTTTCAAAAAAG+AGG | + | chr6.4:47057822-47057841 | MS.gene062621:CDS | 25.0% |
| ! | TCTACATTTGAATTAATGGA+AGG | + | chr6.4:47060610-47060629 | MS.gene062621:intron | 25.0% |
| ! | TGACTTAAATTTGTGATTTC+TGG | + | chr6.4:47059089-47059108 | MS.gene062621:intron | 25.0% |
| ! | TGCTAAATAACTATGTAAAG+TGG | + | chr6.4:47062103-47062122 | MS.gene062621:intron | 25.0% |
| ! | TGTCAAATTAACCAAGTAAT+TGG | + | chr6.4:47059278-47059297 | MS.gene062621:intron | 25.0% |
| ! | TTCAAAAAATATTTCTCGTG+TGG | + | chr6.4:47061835-47061854 | MS.gene062621:intron | 25.0% |
| ! | TTCTTAATAATGAAAGAACG+GGG | - | chr6.4:47062081-47062100 | None:intergenic | 25.0% |
| ! | TTGTTCATGTCATTGATATT+GGG | + | chr6.4:47058767-47058786 | MS.gene062621:intron | 25.0% |
| ! | TTTCTTAAAGTCATTTCTGA+AGG | - | chr6.4:47063009-47063028 | None:intergenic | 25.0% |
| ! | TTTGATATCAAAAAAGAGTC+GGG | - | chr6.4:47060253-47060272 | None:intergenic | 25.0% |
| !! | ATCAATACCAAACTTTTCAT+CGG | - | chr6.4:47060199-47060218 | None:intergenic | 25.0% |
| !! | TATTATATCCTTTTAGCAAC+AGG | + | chr6.4:47060498-47060517 | MS.gene062621:intron | 25.0% |
| !! | TCTTAAAGAAGTCTTGTAAA+CGG | + | chr6.4:47059392-47059411 | MS.gene062621:intron | 25.0% |
| !!! | AATTTTTATTTCTCTTCTGC+AGG | + | chr6.4:47063103-47063122 | MS.gene062621:intron | 25.0% |
| !!! | ATCCTATTTGGTTTTTTTCT+TGG | + | chr6.4:47057652-47057671 | MS.gene062621:CDS | 25.0% |
| !!! | CTTTTTCGTTAAGTTATGAA+AGG | + | chr6.4:47062638-47062657 | MS.gene062621:intron | 25.0% |
| !!! | GTAAATTTTTCTAGCACTTT+TGG | + | chr6.4:47061659-47061678 | MS.gene062621:intron | 25.0% |
| !!! | TATTTTGTTATGGTAAGTGA+TGG | + | chr6.4:47060972-47060991 | MS.gene062621:intron | 25.0% |
| !!! | TCACTTCTTCCAATTTTTTT+TGG | - | chr6.4:47063747-47063766 | None:intergenic | 25.0% |
| !!! | TCCCTTTTTCCAATTTTTTT+CGG | - | chr6.4:47063665-47063684 | None:intergenic | 25.0% |
| !!! | TTTTTTTACATTTGTCACAC+TGG | + | chr6.4:47061752-47061771 | MS.gene062621:intron | 25.0% |
| AAAGAAAACTGAGAAACTTC+GGG | + | chr6.4:47060020-47060039 | MS.gene062621:CDS | 30.0% | |
| AACAGACAGAAAAATGACTT+TGG | - | chr6.4:47060170-47060189 | None:intergenic | 30.0% | |
| ACAAGAAACTAGTGATTTGA+AGG | + | chr6.4:47063502-47063521 | MS.gene062621:CDS | 30.0% | |
| AGCACTTATATCTAGATATC+AGG | - | chr6.4:47061870-47061889 | None:intergenic | 30.0% | |
| AGCCGAAAAAAATTGGAAAA+AGG | + | chr6.4:47063660-47063679 | MS.gene062621:CDS | 30.0% | |
| AGTCAATAGTTATGCACAAA+GGG | + | chr6.4:47062977-47062996 | MS.gene062621:intron | 30.0% | |
| ATAAAACAGCGTAGTCAAAT+AGG | - | chr6.4:47060927-47060946 | None:intergenic | 30.0% | |
| ATAGATTCTACTACACAATG+AGG | - | chr6.4:47057914-47057933 | None:intergenic | 30.0% | |
| ATATTACCATACTTCCTAAC+AGG | - | chr6.4:47058919-47058938 | None:intergenic | 30.0% | |
| ATCTAAAAACTCAAGCTTTC+TGG | + | chr6.4:47061520-47061539 | MS.gene062621:intron | 30.0% | |
| ATGAAAGAGAAAAACTCCAA+TGG | + | chr6.4:47059770-47059789 | MS.gene062621:CDS | 30.0% | |
| ATGTCATTGATATTGGGTTT+GGG | + | chr6.4:47058773-47058792 | MS.gene062621:intron | 30.0% | |
| ATTCTCATAATCATTAACCG+AGG | + | chr6.4:47059566-47059585 | MS.gene062621:intron | 30.0% | |
| CAATATTGGAGATTGAAACA+AGG | + | chr6.4:47061177-47061196 | MS.gene062621:CDS | 30.0% | |
| CACCAAGAAAAAAACCAAAT+AGG | - | chr6.4:47057657-47057676 | None:intergenic | 30.0% | |
| CATTCTCTCAACAATCTTAA+AGG | - | chr6.4:47060707-47060726 | None:intergenic | 30.0% | |
| CATTTGAATTAATGGAAGGA+AGG | + | chr6.4:47060614-47060633 | MS.gene062621:intron | 30.0% | |
| CTCCTACAAAAAAATGGTAA+TGG | + | chr6.4:47059034-47059053 | MS.gene062621:intron | 30.0% | |
| CTGTTCATTTCTATAAACGA+AGG | - | chr6.4:47063061-47063080 | None:intergenic | 30.0% | |
| GAGATAACATGTTATAGCTT+TGG | + | chr6.4:47059496-47059515 | MS.gene062621:intron | 30.0% | |
| GATTCAAAGCCGAAAAAAAT+TGG | + | chr6.4:47063653-47063672 | MS.gene062621:CDS | 30.0% | |
| GCCGAAAAAAATTGGAAAAA+GGG | + | chr6.4:47063661-47063680 | MS.gene062621:CDS | 30.0% | |
| GTTACATCATGAACAACTAA+AGG | + | chr6.4:47062260-47062279 | MS.gene062621:intron | 30.0% | |
| GTTTCTTTGTTGATCCTATT+TGG | + | chr6.4:47057640-47057659 | MS.gene062621:CDS | 30.0% | |
| GTTTGGTTATTGCTATCAAT+TGG | - | chr6.4:47063275-47063294 | None:intergenic | 30.0% | |
| TAAAACAGCGTAGTCAAATA+GGG | - | chr6.4:47060926-47060945 | None:intergenic | 30.0% | |
| TAGATCAGATGAAGTATAGT+CGG | + | chr6.4:47058436-47058455 | MS.gene062621:intron | 30.0% | |
| TAGATTCTACTACACAATGA+GGG | - | chr6.4:47057913-47057932 | None:intergenic | 30.0% | |
| TAGTCAATAGTTATGCACAA+AGG | + | chr6.4:47062976-47062995 | MS.gene062621:intron | 30.0% | |
| TCGTTTATAGAAATGAACAG+AGG | + | chr6.4:47063061-47063080 | MS.gene062621:intron | 30.0% | |
| TCTCAACAATCTTAAAGGAA+TGG | - | chr6.4:47060702-47060721 | None:intergenic | 30.0% | |
| TGGTAGAAAAGATTGTAGTA+AGG | + | chr6.4:47058409-47058428 | MS.gene062621:intron | 30.0% | |
| TGTAGGTGAAAACATTTGAA+TGG | + | chr6.4:47062227-47062246 | MS.gene062621:intron | 30.0% | |
| ! | AAATGATTTAGAGTTCACGA+AGG | - | chr6.4:47062135-47062154 | None:intergenic | 30.0% |
| ! | AAGGAAAAAAGAGGTTTTTG+AGG | + | chr6.4:47058888-47058907 | MS.gene062621:CDS | 30.0% |
| ! | AATCACTAGTTTCTTGTTGT+TGG | - | chr6.4:47063499-47063518 | None:intergenic | 30.0% |
| ! | AGGAAGTATGGTAATATCAA+AGG | + | chr6.4:47058922-47058941 | MS.gene062621:CDS | 30.0% |
| ! | ATATTCTGGAAGTGCAATAT+TGG | + | chr6.4:47061163-47061182 | MS.gene062621:CDS | 30.0% |
| ! | CTTAAAGAAGTCTTGTAAAC+GGG | + | chr6.4:47059393-47059412 | MS.gene062621:intron | 30.0% |
| ! | GCATAACTATTGACTACTTA+GGG | - | chr6.4:47062972-47062991 | None:intergenic | 30.0% |
| ! | GTGGTTTTCAACAGTTTTTT+TGG | + | chr6.4:47061787-47061806 | MS.gene062621:intron | 30.0% |
| ! | TAGTACTTAGGCATTCATTT+TGG | + | chr6.4:47060459-47060478 | MS.gene062621:intron | 30.0% |
| ! | TCTTTTATGAAACCAACAGT+AGG | + | chr6.4:47059853-47059872 | MS.gene062621:CDS | 30.0% |
| ! | TGCATAACTATTGACTACTT+AGG | - | chr6.4:47062973-47062992 | None:intergenic | 30.0% |
| ! | TTTCCTCACCTACATTTTAA+CGG | - | chr6.4:47061451-47061470 | None:intergenic | 30.0% |
| ! | TTTTTCTCCCGTTAAAATGT+AGG | + | chr6.4:47061440-47061459 | MS.gene062621:intron | 30.0% |
| ! | TTTTTCTCTTTCATCACATG+AGG | - | chr6.4:47059764-47059783 | None:intergenic | 30.0% |
| !! | AAAAATGGTAATGGTGTTTG+TGG | + | chr6.4:47059043-47059062 | MS.gene062621:intron | 30.0% |
| !! | AAGCTTGAGTTTTTAGATGA+AGG | - | chr6.4:47061518-47061537 | None:intergenic | 30.0% |
| !! | ACCATTTTTCATATAGCTAG+TGG | - | chr6.4:47060067-47060086 | None:intergenic | 30.0% |
| !! | CTCTTCAGTTTTTCTTGTTT+CGG | - | chr6.4:47063347-47063366 | None:intergenic | 30.0% |
| !! | GAAAAGTTTGGTATTGATGA+GGG | + | chr6.4:47060201-47060220 | MS.gene062621:CDS | 30.0% |
| !! | TGAAAAGTTTGGTATTGATG+AGG | + | chr6.4:47060200-47060219 | MS.gene062621:CDS | 30.0% |
| !! | TGTCTTGGTTTTTAAAAGAG+AGG | + | chr6.4:47061613-47061632 | MS.gene062621:intron | 30.0% |
| !!! | CACCATTACCATTTTTTTGT+AGG | - | chr6.4:47059039-47059058 | None:intergenic | 30.0% |
| !!! | CGACTCTTTTTTGATATCAA+AGG | + | chr6.4:47060252-47060271 | MS.gene062621:CDS | 30.0% |
| !!! | GTCTTCTCTATTTTTTACAG+AGG | + | chr6.4:47060994-47061013 | MS.gene062621:intron | 30.0% |
| !!! | TATTTATTTTTTGGGGGGAA+GGG | - | chr6.4:47062193-47062212 | None:intergenic | 30.0% |
| !!! | TGACTACGCTGTTTTATTTA+CGG | + | chr6.4:47060930-47060949 | MS.gene062621:intron | 30.0% |
| !!! | TTATTTATTTTTTGGGGGGA+AGG | - | chr6.4:47062194-47062213 | None:intergenic | 30.0% |
| AAAAACTCAAGCTTTCTGGA+TGG | + | chr6.4:47061524-47061543 | MS.gene062621:intron | 35.0% | |
| AAAAAGATGATTGGGTTCCT+CGG | + | chr6.4:47063192-47063211 | MS.gene062621:CDS | 35.0% | |
| AACTAGTACTACGATCAAGT+TGG | - | chr6.4:47057783-47057802 | None:intergenic | 35.0% | |
| AAGTTTCATTCCCAGATTCT+TGG | - | chr6.4:47063244-47063263 | None:intergenic | 35.0% | |
| AATAGAAAGGGCTACTAAGA+CGG | + | chr6.4:47059891-47059910 | MS.gene062621:CDS | 35.0% | |
| AATGTATTAGTGCTCATGCA+TGG | + | chr6.4:47061559-47061578 | MS.gene062621:intron | 35.0% | |
| ACACTGGAAATGAAATCATG+TGG | + | chr6.4:47061768-47061787 | MS.gene062621:intron | 35.0% | |
| AGAGGTGAAAAGGAAAAAAG+AGG | + | chr6.4:47058879-47058898 | MS.gene062621:CDS | 35.0% | |
| AGTAGGGAGTTATAAAGAGA+TGG | - | chr6.4:47062035-47062054 | None:intergenic | 35.0% | |
| ATAGATTTCCATCTTGATCC+AGG | - | chr6.4:47061978-47061997 | None:intergenic | 35.0% | |
| ATATGGATCAACCAAGAATC+TGG | + | chr6.4:47063230-47063249 | MS.gene062621:CDS | 35.0% | |
| ATATTTAGGGAGCAATGAGT+TGG | + | chr6.4:47058512-47058531 | MS.gene062621:intron | 35.0% | |
| ATGCATGGAAACCATATTTG+TGG | + | chr6.4:47061574-47061593 | MS.gene062621:intron | 35.0% | |
| ATTGAAACAAGGCTAGAAGT+TGG | + | chr6.4:47061188-47061207 | MS.gene062621:CDS | 35.0% | |
| CAACCAATGGGAAAAAAGTA+GGG | - | chr6.4:47062051-47062070 | None:intergenic | 35.0% | |
| CATGTCATTGATATTGGGTT+TGG | + | chr6.4:47058772-47058791 | MS.gene062621:intron | 35.0% | |
| GATAGCAATAACCAAACTTC+TGG | + | chr6.4:47063278-47063297 | MS.gene062621:CDS | 35.0% | |
| GATCATCAAAAGAGGTGAAA+AGG | + | chr6.4:47058869-47058888 | MS.gene062621:CDS | 35.0% | |
| GCCACTAGCTATATGAAAAA+TGG | + | chr6.4:47060063-47060082 | MS.gene062621:CDS | 35.0% | |
| GCTGAAAAAGAGAAACTTGA+CGG | - | chr6.4:47063419-47063438 | None:intergenic | 35.0% | |
| GTCAATAGTTATGCACAAAG+GGG | + | chr6.4:47062978-47062997 | MS.gene062621:intron | 35.0% | |
| GTCTGTACAGATATCAACAT+GGG | + | chr6.4:47061059-47061078 | MS.gene062621:CDS | 35.0% | |
| TATGGATCAACCAAGAATCT+GGG | + | chr6.4:47063231-47063250 | MS.gene062621:CDS | 35.0% | |
| TATTTCAGCGTTGTCAATTG+CGG | + | chr6.4:47060739-47060758 | MS.gene062621:intron | 35.0% | |
| TCAAAAGGTTCCTATCACTT+TGG | + | chr6.4:47062422-47062441 | MS.gene062621:intron | 35.0% | |
| TCAACACTTAATCCTACTGT+TGG | - | chr6.4:47059868-47059887 | None:intergenic | 35.0% | |
| TCCTATCACTTTGGCAATAA+GGG | + | chr6.4:47062431-47062450 | MS.gene062621:CDS | 35.0% | |
| TCTGTACAGATATCAACATG+GGG | + | chr6.4:47061060-47061079 | MS.gene062621:CDS | 35.0% | |
| TCTTGGTTGATCCATATGAA+AGG | - | chr6.4:47063227-47063246 | None:intergenic | 35.0% | |
| TGAAACTGAGTTCAATTCCT+GGG | + | chr6.4:47059345-47059364 | MS.gene062621:intron | 35.0% | |
| TGGTTATTGCTATCAATTGG+AGG | - | chr6.4:47063272-47063291 | None:intergenic | 35.0% | |
| TGTGGAAAGATCATCAAAAG+AGG | + | chr6.4:47058861-47058880 | MS.gene062621:CDS | 35.0% | |
| TGTGTAGTACATAGTTTCCT+CGG | - | chr6.4:47059586-47059605 | None:intergenic | 35.0% | |
| TTCAACTTGGAATCATCTGT+TGG | + | chr6.4:47062546-47062565 | MS.gene062621:CDS | 35.0% | |
| TTCCTATCACTTTGGCAATA+AGG | + | chr6.4:47062430-47062449 | MS.gene062621:CDS | 35.0% | |
| TTGATGAGGGAACATTATGT+TGG | + | chr6.4:47060214-47060233 | MS.gene062621:CDS | 35.0% | |
| ! | AACAAATGGACTTCATTCTC+AGG | + | chr6.4:47059985-47060004 | MS.gene062621:CDS | 35.0% |
| ! | AACAGTAGGATTAAGTGTTG+AGG | + | chr6.4:47059867-47059886 | MS.gene062621:CDS | 35.0% |
| ! | ATTGATATTGGGTTTGGGTT+TGG | + | chr6.4:47058778-47058797 | MS.gene062621:intron | 35.0% |
| ! | CAATGAGTTGGATCGAAATA+TGG | + | chr6.4:47058524-47058543 | MS.gene062621:intron | 35.0% |
| ! | CAGTTTTCTTTTTGTCTTCG+CGG | - | chr6.4:47060011-47060030 | None:intergenic | 35.0% |
| ! | CATAAAGAGTTTTGCTTCCA+TGG | - | chr6.4:47059687-47059706 | None:intergenic | 35.0% |
| ! | GAAGGTTTCAAAGTACTTTG+TGG | + | chr6.4:47058843-47058862 | MS.gene062621:CDS | 35.0% |
| ! | TCCAAGTTGAAGTCTATATC+AGG | - | chr6.4:47062537-47062556 | None:intergenic | 35.0% |
| ! | TGTTATTGTTGTTGTTGCTG+CGG | + | chr6.4:47057675-47057694 | MS.gene062621:CDS | 35.0% |
| ! | TGTTGGCCACTTTCTAATAA+AGG | - | chr6.4:47063482-47063501 | None:intergenic | 35.0% |
| ! | TTGATATTGGGTTTGGGTTT+GGG | + | chr6.4:47058779-47058798 | MS.gene062621:intron | 35.0% |
| ! | TTTTCCTACGAAGTCGTTTA+AGG | - | chr6.4:47057723-47057742 | None:intergenic | 35.0% |
| !! | AAAAAAGTACCCGATCAAAG+TGG | + | chr6.4:47059639-47059658 | MS.gene062621:CDS | 35.0% |
| !! | AAGTACTTTGAAACCTTCTC+TGG | - | chr6.4:47058841-47058860 | None:intergenic | 35.0% |
| !! | AAGTGTTGAGGCAATAGAAA+GGG | + | chr6.4:47059879-47059898 | MS.gene062621:CDS | 35.0% |
| !! | AGTTTTTCTTGTTTCGGTTC+TGG | - | chr6.4:47063341-47063360 | None:intergenic | 35.0% |
| !! | ATTTGTTATCCAAGCCAACT+CGG | - | chr6.4:47059972-47059991 | None:intergenic | 35.0% |
| !! | TAAGTGTTGAGGCAATAGAA+AGG | + | chr6.4:47059878-47059897 | MS.gene062621:CDS | 35.0% |
| !! | TGTTTTTGAGCACTTTCATG+TGG | + | chr6.4:47062299-47062318 | MS.gene062621:intron | 35.0% |
| !! | TTCCTCACCTACATTTTAAC+GGG | - | chr6.4:47061450-47061469 | None:intergenic | 35.0% |
| !!! | ATTTATTTTTTGGGGGGAAG+GGG | - | chr6.4:47062192-47062211 | None:intergenic | 35.0% |
| !!! | TCTCTTTTTCAGCAGCAATA+AGG | + | chr6.4:47063426-47063445 | MS.gene062621:CDS | 35.0% |
| !!! | TTTTTGAGGTTTCTCCTGTT+AGG | + | chr6.4:47058902-47058921 | MS.gene062621:CDS | 35.0% |
| AACCTGAATTCTCTCTTGCA+CGG | - | chr6.4:47060298-47060317 | None:intergenic | 40.0% | |
| AAGCAATTAGGTCTTGCAGA+AGG | + | chr6.4:47061299-47061318 | MS.gene062621:CDS | 40.0% | |
| AAGTATAGTCGGATCACTAG+AGG | + | chr6.4:47058447-47058466 | MS.gene062621:intron | 40.0% | |
| AATGTTCCACCCTGTATCAT+TGG | + | chr6.4:47061083-47061102 | MS.gene062621:CDS | 40.0% | |
| ACCCTTATTGCCAAAGTGAT+AGG | - | chr6.4:47062435-47062454 | None:intergenic | 40.0% | |
| AGCAATAACCAAACTTCTGG+TGG | + | chr6.4:47063281-47063300 | MS.gene062621:CDS | 40.0% | |
| AGCTTGAACCTGTTGCTAAA+AGG | - | chr6.4:47060509-47060528 | None:intergenic | 40.0% | |
| ATATTCGATGTCAACCTCCA+AGG | - | chr6.4:47061147-47061166 | None:intergenic | 40.0% | |
| ATATTTCTCGTGTGGACAAG+TGG | + | chr6.4:47061843-47061862 | MS.gene062621:intron | 40.0% | |
| ATGCCTACGCTTTCACTATT+TGG | - | chr6.4:47063155-47063174 | None:intergenic | 40.0% | |
| ATGTTCCACCCTGTATCATT+GGG | + | chr6.4:47061084-47061103 | MS.gene062621:CDS | 40.0% | |
| CAAGCGCTCCTACAAAAAAA+TGG | + | chr6.4:47059028-47059047 | MS.gene062621:CDS | 40.0% | |
| CACCTGAACAATTCGTCTTT+CGG | - | chr6.4:47059327-47059346 | None:intergenic | 40.0% | |
| CACTAAACAGCATCGTATAG+TGG | + | chr6.4:47060843-47060862 | MS.gene062621:intron | 40.0% | |
| CATACAACCATTCAGCTCAA+AGG | + | chr6.4:47058979-47058998 | MS.gene062621:CDS | 40.0% | |
| CGGAATTTCTTGGTTTCTTG+TGG | + | chr6.4:47057695-47057714 | MS.gene062621:CDS | 40.0% | |
| CGTCTGTACAGATATCAACA+TGG | + | chr6.4:47061058-47061077 | MS.gene062621:CDS | 40.0% | |
| CTTAAAGGAATGGAGTTTGC+TGG | - | chr6.4:47060692-47060711 | None:intergenic | 40.0% | |
| GAAACCATACCACAGTTGAT+CGG | - | chr6.4:47062505-47062524 | None:intergenic | 40.0% | |
| GAACTATTTGTACCTTGAGC+CGG | - | chr6.4:47062617-47062636 | None:intergenic | 40.0% | |
| GAGGTTGACATCGAATATTC+TGG | + | chr6.4:47061149-47061168 | MS.gene062621:CDS | 40.0% | |
| GATGGATAGGTCAATCAGTT+CGG | + | chr6.4:47063619-47063638 | MS.gene062621:CDS | 40.0% | |
| GCAACCAATGGGAAAAAAGT+AGG | - | chr6.4:47062052-47062071 | None:intergenic | 40.0% | |
| GCCTGATATAGACTTCAACT+TGG | + | chr6.4:47062533-47062552 | MS.gene062621:CDS | 40.0% | |
| GCTAGCGGAAAAAGATGATT+GGG | + | chr6.4:47063184-47063203 | MS.gene062621:CDS | 40.0% | |
| GGAATGTTGCACCTTTCATA+TGG | + | chr6.4:47063213-47063232 | MS.gene062621:CDS | 40.0% | |
| GGGTAGAAAATAGGCTTAGA+TGG | + | chr6.4:47058389-47058408 | MS.gene062621:intron | 40.0% | |
| GTGAAACTGAGTTCAATTCC+TGG | + | chr6.4:47059344-47059363 | MS.gene062621:intron | 40.0% | |
| GTTCAAATTGGCTATGCTAC+AGG | + | chr6.4:47060782-47060801 | MS.gene062621:intron | 40.0% | |
| GTTTCTCCTGTTAGGAAGTA+TGG | + | chr6.4:47058910-47058929 | MS.gene062621:CDS | 40.0% | |
| GTTTCTTCAGGGTGTAGTTT+GGG | + | chr6.4:47058807-47058826 | MS.gene062621:intron | 40.0% | |
| TACTTAGGGCCTGTTTGAAT+TGG | - | chr6.4:47062958-47062977 | None:intergenic | 40.0% | |
| TAGTGGCTAAAACTGCATCT+TGG | - | chr6.4:47060050-47060069 | None:intergenic | 40.0% | |
| TCGTCTGATATGGAACTTCT+CGG | - | chr6.4:47060105-47060124 | None:intergenic | 40.0% | |
| TCTGACACCGATGAAAAGTT+TGG | + | chr6.4:47060189-47060208 | MS.gene062621:CDS | 40.0% | |
| TGCCTACGCTTTCACTATTT+GGG | - | chr6.4:47063154-47063173 | None:intergenic | 40.0% | |
| TGCTAGCGGAAAAAGATGAT+TGG | + | chr6.4:47063183-47063202 | MS.gene062621:CDS | 40.0% | |
| TGCTTGAGAATCTGATTTCC+TGG | - | chr6.4:47063393-47063412 | None:intergenic | 40.0% | |
| TTCCAGTCACCATCTTCTTT+AGG | - | chr6.4:47061344-47061363 | None:intergenic | 40.0% | |
| TTTCATCACATGAGGCCAAA+CGG | - | chr6.4:47059756-47059775 | None:intergenic | 40.0% | |
| ! | AGGGATGATGATGATAGTGA+TGG | - | chr6.4:47060132-47060151 | None:intergenic | 40.0% |
| ! | GCTCTCATAAAGCATTCAGA+TGG | + | chr6.4:47061887-47061906 | MS.gene062621:intron | 40.0% |
| ! | GTCCTGTTTTCCACTTTGAT+CGG | - | chr6.4:47059652-47059671 | None:intergenic | 40.0% |
| ! | GTTCGAGAAGGAATTTTGGA+AGG | - | chr6.4:47061697-47061716 | None:intergenic | 40.0% |
| ! | TCCTGTTTTCCACTTTGATC+GGG | - | chr6.4:47059651-47059670 | None:intergenic | 40.0% |
| ! | TCGTGGTCACTTTCTAATGA+AGG | - | chr6.4:47063539-47063558 | None:intergenic | 40.0% |
| ! | TGATATTGGGTTTGGGTTTG+GGG | + | chr6.4:47058780-47058799 | MS.gene062621:intron | 40.0% |
| ! | TTGCTTTGTTCCTGATCAAC+CGG | + | chr6.4:47062595-47062614 | MS.gene062621:CDS | 40.0% |
| ! | TTTGTTATCCAAGCCAACTC+GGG | - | chr6.4:47059971-47059990 | None:intergenic | 40.0% |
| !! | GAGTTGGCTTGGATAACAAA+TGG | + | chr6.4:47059971-47059990 | MS.gene062621:CDS | 40.0% |
| !! | TAGCACTTTTGGTGATAGCA+GGG | + | chr6.4:47061670-47061689 | MS.gene062621:intron | 40.0% |
| !!! | ACTCCCTACTTTTTTCCCAT+TGG | + | chr6.4:47062045-47062064 | MS.gene062621:intron | 40.0% |
| !!! | TTGGGTTTTAGAACCAGAGA+AGG | + | chr6.4:47058825-47058844 | MS.gene062621:CDS | 40.0% |
| !!! | TTTTTTTGTAGGAGCGCTTG+TGG | - | chr6.4:47059028-47059047 | None:intergenic | 40.0% |
| AAAAACGCAGTGTCCCTCTT+AGG | - | chr6.4:47062464-47062483 | None:intergenic | 45.0% | |
| AAAACGCAGTGTCCCTCTTA+GGG | - | chr6.4:47062463-47062482 | None:intergenic | 45.0% | |
| AAAGCTAGTGCAAAGACCTC+AGG | + | chr6.4:47063308-47063327 | MS.gene062621:CDS | 45.0% | |
| AACCCTCATCCCAATGATAC+AGG | - | chr6.4:47061096-47061115 | None:intergenic | 45.0% | |
| AACTGAGTTCAATTCCTGGG+TGG | + | chr6.4:47059348-47059367 | MS.gene062621:intron | 45.0% | |
| AATCCCGTGTCGAACAATGT+TGG | + | chr6.4:47061233-47061252 | MS.gene062621:CDS | 45.0% | |
| ACCAAGTAATTGGGCTCAAG+TGG | + | chr6.4:47059288-47059307 | MS.gene062621:intron | 45.0% | |
| ACCACTTGAGCCCAATTACT+TGG | - | chr6.4:47059292-47059311 | None:intergenic | 45.0% | |
| ACCCGATCAAAGTGGAAAAC+AGG | + | chr6.4:47059647-47059666 | MS.gene062621:CDS | 45.0% | |
| ACCCTCATCCCAATGATACA+GGG | - | chr6.4:47061095-47061114 | None:intergenic | 45.0% | |
| ACCCTGTATCATTGGGATGA+GGG | + | chr6.4:47061091-47061110 | MS.gene062621:CDS | 45.0% | |
| ACGGGGAAAAAAGCAACCAA+TGG | - | chr6.4:47062064-47062083 | None:intergenic | 45.0% | |
| AGACCCAACATTGTTCGACA+CGG | - | chr6.4:47061240-47061259 | None:intergenic | 45.0% | |
| AGCCTAAAGAAGATGGTGAC+TGG | + | chr6.4:47061339-47061358 | MS.gene062621:CDS | 45.0% | |
| AGGACCTCTGTGATATACCA+TGG | + | chr6.4:47059667-47059686 | MS.gene062621:CDS | 45.0% | |
| AGGATGCAAGCACGTCATAA+AGG | - | chr6.4:47059469-47059488 | None:intergenic | 45.0% | |
| ATAAGGGTAGCATCCCTAAG+AGG | + | chr6.4:47062447-47062466 | MS.gene062621:CDS | 45.0% | |
| ATATGCGGGAGTTCTCATGT+TGG | - | chr6.4:47061027-47061046 | None:intergenic | 45.0% | |
| ATCCCGTGTCGAACAATGTT+GGG | + | chr6.4:47061234-47061253 | MS.gene062621:CDS | 45.0% | |
| ATCCGTGCAAGAGAGAATTC+AGG | + | chr6.4:47060293-47060312 | MS.gene062621:CDS | 45.0% | |
| ATGAGAACTCCCGCATATGT+CGG | + | chr6.4:47061029-47061048 | MS.gene062621:CDS | 45.0% | |
| ATGCTATAGGTGGTTCGAGA+AGG | - | chr6.4:47061709-47061728 | None:intergenic | 45.0% | |
| ATGGTTGTATGCGATCCATC+AGG | - | chr6.4:47058970-47058989 | None:intergenic | 45.0% | |
| CATACCTCGCTCATTTCCAT+CGG | - | chr6.4:47061122-47061141 | None:intergenic | 45.0% | |
| CGGGGAAAAAAGCAACCAAT+GGG | - | chr6.4:47062063-47062082 | None:intergenic | 45.0% | |
| CTCCCGTTAAAATGTAGGTG+AGG | + | chr6.4:47061445-47061464 | MS.gene062621:intron | 45.0% | |
| CTTATCCCACTAAGTGGAGT+CGG | - | chr6.4:47058589-47058608 | None:intergenic | 45.0% | |
| CTTGCAACTGCGAATACCAT+TGG | - | chr6.4:47059789-47059808 | None:intergenic | 45.0% | |
| CTTTCACTCCACCAGAAGTT+TGG | - | chr6.4:47063292-47063311 | None:intergenic | 45.0% | |
| GAACAAAGCAATGCGCGTAT+TGG | - | chr6.4:47062586-47062605 | None:intergenic | 45.0% | |
| GAAGATGGTGACTGGAACAA+TGG | + | chr6.4:47061347-47061366 | MS.gene062621:CDS | 45.0% | |
| GACTCCACTTAGTGGGATAA+GGG | + | chr6.4:47058588-47058607 | MS.gene062621:intron | 45.0% | |
| GATGCATCCTTTGAGCTGAA+TGG | - | chr6.4:47058989-47059008 | None:intergenic | 45.0% | |
| GCTTCCATGGTATATCACAG+AGG | - | chr6.4:47059674-47059693 | None:intergenic | 45.0% | |
| GGATCCTTAAACGACTTCGT+AGG | + | chr6.4:47057716-47057735 | MS.gene062621:CDS | 45.0% | |
| GGTTTCTTCAGGGTGTAGTT+TGG | + | chr6.4:47058806-47058825 | MS.gene062621:intron | 45.0% | |
| GTTGTTGCTGCGGAATTTCT+TGG | + | chr6.4:47057685-47057704 | MS.gene062621:CDS | 45.0% | |
| TAAGGGTAGCATCCCTAAGA+GGG | + | chr6.4:47062448-47062467 | MS.gene062621:CDS | 45.0% | |
| TCCATCACTGCACTATTCGA+AGG | - | chr6.4:47063605-47063624 | None:intergenic | 45.0% | |
| TCGCAAGAGCCTAAAGAAGA+TGG | + | chr6.4:47061332-47061351 | MS.gene062621:CDS | 45.0% | |
| TGAGAATCTGATTTCCTGGC+TGG | - | chr6.4:47063389-47063408 | None:intergenic | 45.0% | |
| TGAGACTTCGTCTGAGAAAG+AGG | + | chr6.4:47059714-47059733 | MS.gene062621:CDS | 45.0% | |
| TGGTACCTGTGAAACATGCT+TGG | - | chr6.4:47062015-47062034 | None:intergenic | 45.0% | |
| TGTTGCCAAGCATGTTTCAC+AGG | + | chr6.4:47062007-47062026 | MS.gene062621:CDS | 45.0% | |
| ! | ATGAAAGGTGCAACATTCCG+AGG | - | chr6.4:47063212-47063231 | None:intergenic | 45.0% |
| ! | CAAAAACTGACGGACCTTTG+AGG | - | chr6.4:47059926-47059945 | None:intergenic | 45.0% |
| ! | CTCCCAAATAGTGAAAGCGT+AGG | + | chr6.4:47063149-47063168 | MS.gene062621:CDS | 45.0% |
| ! | GGTGGTTCGAGAAGGAATTT+TGG | - | chr6.4:47061701-47061720 | None:intergenic | 45.0% |
| ! | GTTGGTGAGCTAGAGAAAGA+GGG | + | chr6.4:47061206-47061225 | MS.gene062621:CDS | 45.0% |
| ! | TGAGAAAGAGGCATGGTGTA+AGG | + | chr6.4:47059726-47059745 | MS.gene062621:CDS | 45.0% |
| ! | TTTGGGGTTGGGTTTCTTCA+GGG | + | chr6.4:47058796-47058815 | MS.gene062621:intron | 45.0% |
| !! | AGCACTTTTGGTGATAGCAG+GGG | + | chr6.4:47061671-47061690 | MS.gene062621:intron | 45.0% |
| !! | AGTTGGTGAGCTAGAGAAAG+AGG | + | chr6.4:47061205-47061224 | MS.gene062621:CDS | 45.0% |
| !! | CGAATAGTGCAGTGATGGAT+AGG | + | chr6.4:47063606-47063625 | MS.gene062621:CDS | 45.0% |
| !! | CTAGCACTTTTGGTGATAGC+AGG | + | chr6.4:47061669-47061688 | MS.gene062621:intron | 45.0% |
| !! | GAGTTTGCTGGACCAAAATG+GGG | - | chr6.4:47060680-47060699 | None:intergenic | 45.0% |
| !! | GGAGTTTGCTGGACCAAAAT+GGG | - | chr6.4:47060681-47060700 | None:intergenic | 45.0% |
| !! | TGATGGAGCATCGTCTGATA+TGG | - | chr6.4:47060115-47060134 | None:intergenic | 45.0% |
| !! | TGGAGTTTGCTGGACCAAAA+TGG | - | chr6.4:47060682-47060701 | None:intergenic | 45.0% |
| !! | TAAAAATTAATAAATACTAA+TGG | - | chr6.4:47057943-47057962 | None:intergenic | 5.0% |
| !!! | TGTTTATTTATTTATTTTTT+GGG | - | chr6.4:47062201-47062220 | None:intergenic | 5.0% |
| !!! | TTTTTTACTATTTTATAATT+TGG | + | chr6.4:47058082-47058101 | MS.gene062621:intron | 5.0% |
| AATCGAGACAAGATCCAGCC+AGG | + | chr6.4:47063372-47063391 | MS.gene062621:CDS | 50.0% | |
| AATGAGCGAGGTATGTGCCT+TGG | + | chr6.4:47061127-47061146 | MS.gene062621:CDS | 50.0% | |
| ACCATACCACAGTTGATCGG+CGG | - | chr6.4:47062502-47062521 | None:intergenic | 50.0% | |
| ACGACATCACCGACATATGC+GGG | - | chr6.4:47061041-47061060 | None:intergenic | 50.0% | |
| ACGAGAAGATCTTCCCGAGT+TGG | + | chr6.4:47059955-47059974 | MS.gene062621:CDS | 50.0% | |
| ACGATGTGATTGTTCCACCC+AGG | - | chr6.4:47059365-47059384 | None:intergenic | 50.0% | |
| ACTAAGTGGAGTCGGCTACA+TGG | - | chr6.4:47058581-47058600 | None:intergenic | 50.0% | |
| AGGCATTCGATGGATGCTAG+CGG | + | chr6.4:47063169-47063188 | MS.gene062621:CDS | 50.0% | |
| AGTCGGATCACTAGAGGTAG+AGG | + | chr6.4:47058453-47058472 | MS.gene062621:intron | 50.0% | |
| ATCACATGAGGCCAAACGGA+GGG | - | chr6.4:47059752-47059771 | None:intergenic | 50.0% | |
| CACCCTGTATCATTGGGATG+AGG | + | chr6.4:47061090-47061109 | MS.gene062621:CDS | 50.0% | |
| CCAACCCTTATCCCACTAAG+TGG | - | chr6.4:47058595-47058614 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGGT+TGG | + | chr6.4:47058592-47058611 | MS.gene062621:intron | 50.0% | |
| CGAAGCTAGCGAAGAGAAGA+CGG | + | chr6.4:47063556-47063575 | MS.gene062621:CDS | 50.0% | |
| CGACTCCACTTAGTGGGATA+AGG | + | chr6.4:47058587-47058606 | MS.gene062621:intron | 50.0% | |
| CGCCGAAAGACGAATTGTTC+AGG | + | chr6.4:47059322-47059341 | MS.gene062621:intron | 50.0% | |
| CTCATCCCAATGATACAGGG+TGG | - | chr6.4:47061092-47061111 | None:intergenic | 50.0% | |
| CTCTTCTGCAGGCAGCAATT+CGG | + | chr6.4:47063114-47063133 | MS.gene062621:intron | 50.0% | |
| CTTCGTCTGAGAAAGAGGCA+TGG | + | chr6.4:47059719-47059738 | MS.gene062621:CDS | 50.0% | |
| CTTGTTCTCACTGAGCCTGA+TGG | + | chr6.4:47058952-47058971 | MS.gene062621:CDS | 50.0% | |
| GAAAGGGCTACTAAGACGGA+TGG | + | chr6.4:47059895-47059914 | MS.gene062621:CDS | 50.0% | |
| GACCCAACATTGTTCGACAC+GGG | - | chr6.4:47061239-47061258 | None:intergenic | 50.0% | |
| GACGACATCACCGACATATG+CGG | - | chr6.4:47061042-47061061 | None:intergenic | 50.0% | |
| GACGGATGGATCTTCCTCAA+AGG | + | chr6.4:47059909-47059928 | MS.gene062621:CDS | 50.0% | |
| GCCTTCGAATAGTGCAGTGA+TGG | + | chr6.4:47063601-47063620 | MS.gene062621:CDS | 50.0% | |
| GCGTTGTCAATTGCGGATCA+CGG | + | chr6.4:47060746-47060765 | MS.gene062621:intron | 50.0% | |
| GTCAATCAGTTCGGCTCAAC+AGG | + | chr6.4:47063628-47063647 | MS.gene062621:CDS | 50.0% | |
| TCATCATCCCTGTCTCGTTC+AGG | + | chr6.4:47060141-47060160 | MS.gene062621:CDS | 50.0% | |
| TCTTCCGATGGAAATGAGCG+AGG | + | chr6.4:47061115-47061134 | MS.gene062621:CDS | 50.0% | |
| TCTTCTGCAGGCAGCAATTC+GGG | + | chr6.4:47063115-47063134 | MS.gene062621:intron | 50.0% | |
| TTGGCTTCCTGAACGAGACA+GGG | - | chr6.4:47060151-47060170 | None:intergenic | 50.0% | |
| ! | AAGATCTTCCCGAGTTGGCT+TGG | + | chr6.4:47059960-47059979 | MS.gene062621:CDS | 50.0% |
| ! | ATGTAGCCGACTCCACTTAG+TGG | + | chr6.4:47058580-47058599 | MS.gene062621:intron | 50.0% |
| ! | ATTGGGTTTGGGTTTGGGGT+TGG | + | chr6.4:47058784-47058803 | MS.gene062621:intron | 50.0% |
| ! | GTGAAAGCGTAGGCATTCGA+TGG | + | chr6.4:47063159-47063178 | MS.gene062621:CDS | 50.0% |
| ! | GTTTGGGGTTGGGTTTCTTC+AGG | + | chr6.4:47058795-47058814 | MS.gene062621:intron | 50.0% |
| ! | TCTTCTCTTCGCTAGCTTCG+TGG | - | chr6.4:47063556-47063575 | None:intergenic | 50.0% |
| ! | TGTAGCCGACTCCACTTAGT+GGG | + | chr6.4:47058581-47058600 | MS.gene062621:intron | 50.0% |
| ! | TTGGGTTTGGGTTTGGGGTT+GGG | + | chr6.4:47058785-47058804 | MS.gene062621:intron | 50.0% |
| ! | TTTGGCTTCCTGAACGAGAC+AGG | - | chr6.4:47060152-47060171 | None:intergenic | 50.0% |
| !!! | ACTACTGGCTTGCCCCATTT+TGG | + | chr6.4:47060665-47060684 | MS.gene062621:intron | 50.0% |
| !!! | TATTTTTTGGGGGGAAGGGG+TGG | - | chr6.4:47062189-47062208 | None:intergenic | 50.0% |
| AATGCACCTTCCTCGACTCC+TGG | + | chr6.4:47061957-47061976 | MS.gene062621:CDS | 55.0% | |
| ATGGTGTAAGGCCCTCCGTT+TGG | + | chr6.4:47059738-47059757 | MS.gene062621:CDS | 55.0% | |
| CATCACATGAGGCCAAACGG+AGG | - | chr6.4:47059753-47059772 | None:intergenic | 55.0% | |
| CCATACCACAGTTGATCGGC+GGG | - | chr6.4:47062501-47062520 | None:intergenic | 55.0% | |
| CCATCTTGATCCAGGAGTCG+AGG | - | chr6.4:47061970-47061989 | None:intergenic | 55.0% | |
| CCTCGACTCCTGGATCAAGA+TGG | + | chr6.4:47061967-47061986 | MS.gene062621:CDS | 55.0% | |
| CTTGATCCAGGAGTCGAGGA+AGG | - | chr6.4:47061966-47061985 | None:intergenic | 55.0% | |
| GTACCTTGAGCCGGTTGATC+AGG | - | chr6.4:47062608-47062627 | None:intergenic | 55.0% | |
| TGGGATGAGGGTTCTTCCGA+TGG | + | chr6.4:47061103-47061122 | MS.gene062621:CDS | 55.0% | |
| ! | GTTCCTGATCAACCGGCTCA+AGG | + | chr6.4:47062602-47062621 | MS.gene062621:CDS | 55.0% |
| !! | CGGTTCTGGACTATCACCTG+AGG | - | chr6.4:47063327-47063346 | None:intergenic | 55.0% |
| CCCGCCGATCAACTGTGGTA+TGG | + | chr6.4:47062498-47062517 | MS.gene062621:CDS | 60.0% | |
| GAGCGAGGTATGTGCCTTGG+AGG | + | chr6.4:47061130-47061149 | MS.gene062621:CDS | 60.0% | |
| TACCACAGTTGATCGGCGGG+TGG | - | chr6.4:47062498-47062517 | None:intergenic | 60.0% | |
| CACAGTTGATCGGCGGGTGG+CGG | - | chr6.4:47062495-47062514 | None:intergenic | 65.0% | |
| CGCCACCCGCCGATCAACTG+TGG | + | chr6.4:47062493-47062512 | MS.gene062621:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 47057637 | 47063766 | 47057637 | ID=MS.gene062621 |
| chr6.4 | mRNA | 47057637 | 47063766 | 47057637 | ID=MS.gene062621.t1;Parent=MS.gene062621 |
| chr6.4 | exon | 47057637 | 47057843 | 47057637 | ID=MS.gene062621.t1.exon1;Parent=MS.gene062621.t1 |
| chr6.4 | CDS | 47057637 | 47057843 | 47057637 | ID=cds.MS.gene062621.t1;Parent=MS.gene062621.t1 |
| chr6.4 | exon | 47058817 | 47059049 | 47058817 | ID=MS.gene062621.t1.exon2;Parent=MS.gene062621.t1 |
| chr6.4 | CDS | 47058817 | 47059049 | 47058817 | ID=cds.MS.gene062621.t1;Parent=MS.gene062621.t1 |
| chr6.4 | exon | 47059636 | 47060314 | 47059636 | ID=MS.gene062621.t1.exon3;Parent=MS.gene062621.t1 |
| chr6.4 | CDS | 47059636 | 47060314 | 47059636 | ID=cds.MS.gene062621.t1;Parent=MS.gene062621.t1 |
| chr6.4 | exon | 47061014 | 47061368 | 47061014 | ID=MS.gene062621.t1.exon4;Parent=MS.gene062621.t1 |
| chr6.4 | CDS | 47061014 | 47061368 | 47061014 | ID=cds.MS.gene062621.t1;Parent=MS.gene062621.t1 |
| chr6.4 | exon | 47061934 | 47062028 | 47061934 | ID=MS.gene062621.t1.exon5;Parent=MS.gene062621.t1 |
| chr6.4 | CDS | 47061934 | 47062028 | 47061934 | ID=cds.MS.gene062621.t1;Parent=MS.gene062621.t1 |
| chr6.4 | exon | 47062429 | 47062623 | 47062429 | ID=MS.gene062621.t1.exon6;Parent=MS.gene062621.t1 |
| chr6.4 | CDS | 47062429 | 47062623 | 47062429 | ID=cds.MS.gene062621.t1;Parent=MS.gene062621.t1 |
| chr6.4 | exon | 47063125 | 47063766 | 47063125 | ID=MS.gene062621.t1.exon7;Parent=MS.gene062621.t1 |
| chr6.4 | CDS | 47063125 | 47063766 | 47063125 | ID=cds.MS.gene062621.t1;Parent=MS.gene062621.t1 |
| Gene Sequence |
| Protein sequence |
