Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068009.t1 | XP_003608372.2 | 97.8 | 537 | 12 | 0 | 1 | 537 | 1 | 537 | 4.20E-291 | 1010 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068009.t1 | Q0WM29 | 78.3 | 526 | 111 | 2 | 12 | 536 | 83 | 606 | 2.3e-237 | 822.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068009.t1 | G7JU35 | 97.8 | 537 | 12 | 0 | 1 | 537 | 1 | 537 | 3.0e-291 | 1010.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050800 | MS.gene068009 | 0.830951 | 2.20E-55 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068009.t1 | MTR_4g093170 | 97.765 | 537 | 12 | 0 | 1 | 537 | 1 | 537 | 0.0 | 1088 |
| MS.gene068009.t1 | MTR_2g009750 | 84.436 | 514 | 74 | 1 | 24 | 537 | 3 | 510 | 0.0 | 911 |
| MS.gene068009.t1 | MTR_2g009750 | 84.241 | 514 | 74 | 2 | 24 | 537 | 3 | 509 | 0.0 | 905 |
| MS.gene068009.t1 | MTR_2g009750 | 84.241 | 514 | 73 | 2 | 24 | 537 | 3 | 508 | 0.0 | 903 |
| MS.gene068009.t1 | MTR_2g067660 | 30.608 | 477 | 320 | 7 | 41 | 514 | 46 | 514 | 6.20e-66 | 223 |
| MS.gene068009.t1 | MTR_6g086300 | 31.185 | 481 | 307 | 11 | 45 | 514 | 25 | 492 | 2.28e-59 | 205 |
| MS.gene068009.t1 | MTR_6g086300 | 31.185 | 481 | 307 | 11 | 45 | 514 | 25 | 492 | 2.28e-59 | 205 |
| MS.gene068009.t1 | MTR_8g083530 | 31.352 | 488 | 313 | 12 | 36 | 514 | 19 | 493 | 4.05e-58 | 201 |
| MS.gene068009.t1 | MTR_6g086340 | 31.967 | 488 | 310 | 12 | 36 | 514 | 16 | 490 | 5.46e-58 | 201 |
| MS.gene068009.t1 | MTR_3g078170 | 32.422 | 512 | 316 | 14 | 25 | 520 | 41 | 538 | 1.01e-57 | 201 |
| MS.gene068009.t1 | MTR_8g064170 | 31.214 | 519 | 314 | 14 | 25 | 520 | 39 | 537 | 4.97e-57 | 199 |
| MS.gene068009.t1 | MTR_4g107040 | 32.543 | 464 | 292 | 10 | 24 | 474 | 42 | 497 | 5.20e-56 | 197 |
| MS.gene068009.t1 | MTR_3g078550 | 27.824 | 478 | 319 | 10 | 59 | 518 | 25 | 494 | 1.74e-53 | 189 |
| MS.gene068009.t1 | MTR_3g078170 | 33.568 | 426 | 256 | 12 | 25 | 434 | 41 | 455 | 9.06e-52 | 183 |
| MS.gene068009.t1 | MTR_8g083520 | 29.522 | 481 | 282 | 12 | 45 | 514 | 17 | 451 | 1.12e-50 | 180 |
| MS.gene068009.t1 | MTR_3g078550 | 28.017 | 464 | 308 | 10 | 73 | 518 | 9 | 464 | 9.12e-50 | 178 |
| MS.gene068009.t1 | MTR_3g078490 | 26.994 | 489 | 309 | 10 | 59 | 518 | 55 | 524 | 3.79e-48 | 175 |
| MS.gene068009.t1 | MTR_4g106510 | 28.875 | 471 | 314 | 9 | 59 | 516 | 25 | 487 | 1.76e-47 | 172 |
| MS.gene068009.t1 | MTR_1g014320 | 28.000 | 475 | 320 | 9 | 48 | 513 | 22 | 483 | 5.50e-47 | 171 |
| MS.gene068009.t1 | MTR_4g131180 | 27.459 | 488 | 325 | 11 | 37 | 513 | 14 | 483 | 1.48e-45 | 167 |
| MS.gene068009.t1 | MTR_3g078170 | 33.167 | 401 | 241 | 12 | 25 | 409 | 41 | 430 | 2.94e-45 | 165 |
| MS.gene068009.t1 | MTR_3g078170 | 33.086 | 405 | 244 | 12 | 25 | 413 | 41 | 434 | 3.51e-45 | 165 |
| MS.gene068009.t1 | MTR_4g131180 | 27.394 | 449 | 299 | 10 | 37 | 474 | 14 | 446 | 8.85e-44 | 162 |
| MS.gene068009.t1 | MTR_8g064170 | 28.709 | 519 | 295 | 15 | 25 | 520 | 39 | 505 | 3.62e-43 | 161 |
| MS.gene068009.t1 | MTR_2g042330 | 26.350 | 463 | 323 | 7 | 42 | 495 | 22 | 475 | 1.14e-41 | 157 |
| MS.gene068009.t1 | MTR_8g083520 | 29.496 | 417 | 239 | 11 | 107 | 514 | 1 | 371 | 1.37e-39 | 148 |
| MS.gene068009.t1 | MTR_1690s0010 | 32.164 | 342 | 216 | 8 | 45 | 376 | 12 | 347 | 9.92e-39 | 145 |
| MS.gene068009.t1 | MTR_8g083530 | 31.231 | 333 | 218 | 8 | 36 | 361 | 19 | 347 | 3.65e-35 | 135 |
| MS.gene068009.t1 | MTR_1399s0020 | 26.650 | 394 | 234 | 5 | 125 | 517 | 1 | 340 | 4.95e-29 | 118 |
| MS.gene068009.t1 | MTR_3g078490 | 27.217 | 327 | 204 | 5 | 59 | 363 | 25 | 339 | 1.95e-28 | 117 |
| MS.gene068009.t1 | MTR_2g034160 | 24.884 | 430 | 312 | 7 | 54 | 474 | 61 | 488 | 3.15e-27 | 116 |
| MS.gene068009.t1 | MTR_8g094600 | 27.762 | 353 | 237 | 9 | 174 | 521 | 166 | 505 | 1.06e-22 | 102 |
| MS.gene068009.t1 | MTR_8g076480 | 25.310 | 403 | 282 | 9 | 80 | 474 | 8 | 399 | 1.02e-21 | 98.6 |
| MS.gene068009.t1 | MTR_1g029840 | 26.344 | 372 | 248 | 11 | 174 | 537 | 113 | 466 | 2.63e-20 | 94.4 |
| MS.gene068009.t1 | MTR_1g029840 | 26.344 | 372 | 248 | 11 | 174 | 537 | 113 | 466 | 3.09e-20 | 94.4 |
| MS.gene068009.t1 | MTR_3g088150 | 27.213 | 305 | 207 | 8 | 174 | 474 | 115 | 408 | 1.33e-18 | 89.4 |
| MS.gene068009.t1 | MTR_2g097950 | 27.010 | 311 | 203 | 9 | 174 | 474 | 117 | 413 | 7.10e-17 | 84.0 |
| MS.gene068009.t1 | MTR_1222s0010 | 28.114 | 281 | 186 | 6 | 175 | 453 | 104 | 370 | 1.02e-15 | 80.9 |
| MS.gene068009.t1 | MTR_4g065040 | 26.837 | 313 | 201 | 10 | 174 | 474 | 102 | 398 | 2.09e-15 | 79.3 |
| MS.gene068009.t1 | MTR_1314s0010 | 24.355 | 349 | 240 | 8 | 177 | 514 | 1 | 336 | 3.53e-13 | 71.2 |
| MS.gene068009.t1 | MTR_2g097950 | 25.490 | 306 | 179 | 9 | 174 | 474 | 117 | 378 | 1.87e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068009.t1 | AT2G14170 | 78.707 | 526 | 109 | 2 | 12 | 536 | 83 | 606 | 0.0 | 865 |
| MS.gene068009.t1 | AT2G14170 | 81.452 | 496 | 90 | 1 | 41 | 536 | 4 | 497 | 0.0 | 855 |
| MS.gene068009.t1 | AT2G14170 | 79.472 | 492 | 100 | 1 | 12 | 502 | 83 | 574 | 0.0 | 820 |
| MS.gene068009.t1 | AT1G79440 | 32.636 | 478 | 309 | 8 | 41 | 514 | 52 | 520 | 7.36e-60 | 207 |
| MS.gene068009.t1 | AT1G23800 | 31.481 | 486 | 311 | 13 | 45 | 520 | 57 | 530 | 1.54e-55 | 195 |
| MS.gene068009.t1 | AT3G24503 | 29.339 | 484 | 327 | 9 | 45 | 521 | 23 | 498 | 2.32e-55 | 194 |
| MS.gene068009.t1 | AT3G48170 | 29.339 | 484 | 323 | 9 | 45 | 516 | 11 | 487 | 2.30e-54 | 191 |
| MS.gene068009.t1 | AT3G48000 | 30.495 | 505 | 325 | 11 | 22 | 514 | 38 | 528 | 1.14e-53 | 190 |
| MS.gene068009.t1 | AT1G74920 | 28.926 | 484 | 323 | 11 | 45 | 515 | 11 | 486 | 6.59e-52 | 185 |
| MS.gene068009.t1 | AT1G74920 | 28.719 | 484 | 319 | 12 | 45 | 515 | 11 | 481 | 7.59e-49 | 176 |
| MS.gene068009.t1 | AT2G24270 | 26.415 | 477 | 325 | 10 | 48 | 513 | 22 | 483 | 8.06e-45 | 165 |
| MS.gene068009.t1 | AT2G24270 | 26.415 | 477 | 325 | 10 | 48 | 513 | 22 | 483 | 8.06e-45 | 165 |
| MS.gene068009.t1 | AT2G24270 | 26.415 | 477 | 325 | 10 | 48 | 513 | 22 | 483 | 8.37e-45 | 165 |
| MS.gene068009.t1 | AT2G24270 | 26.255 | 518 | 350 | 12 | 7 | 513 | 27 | 523 | 9.53e-45 | 166 |
| MS.gene068009.t1 | AT1G54100 | 25.893 | 448 | 314 | 7 | 58 | 495 | 35 | 474 | 9.79e-42 | 157 |
| MS.gene068009.t1 | AT1G54100 | 25.893 | 448 | 314 | 7 | 58 | 495 | 35 | 474 | 9.79e-42 | 157 |
| MS.gene068009.t1 | AT1G23800 | 34.076 | 314 | 194 | 9 | 45 | 350 | 57 | 365 | 1.48e-35 | 137 |
| MS.gene068009.t1 | AT3G66658 | 23.721 | 430 | 317 | 6 | 54 | 474 | 61 | 488 | 8.06e-29 | 120 |
| MS.gene068009.t1 | AT3G66658 | 23.721 | 430 | 317 | 6 | 54 | 474 | 61 | 488 | 1.10e-28 | 120 |
| MS.gene068009.t1 | AT1G44170 | 25.429 | 350 | 241 | 11 | 174 | 517 | 46 | 381 | 1.37e-21 | 97.8 |
| MS.gene068009.t1 | AT1G44170 | 25.429 | 350 | 241 | 11 | 174 | 517 | 109 | 444 | 1.75e-21 | 98.2 |
| MS.gene068009.t1 | AT1G44170 | 25.429 | 350 | 241 | 11 | 174 | 517 | 109 | 444 | 1.75e-21 | 98.2 |
| MS.gene068009.t1 | AT4G36250 | 26.185 | 443 | 296 | 13 | 89 | 516 | 16 | 442 | 7.27e-20 | 93.2 |
| MS.gene068009.t1 | AT4G34240 | 28.105 | 306 | 203 | 9 | 174 | 474 | 30 | 323 | 4.02e-18 | 87.0 |
| MS.gene068009.t1 | AT4G34240 | 25.183 | 409 | 270 | 14 | 79 | 474 | 80 | 465 | 6.65e-18 | 87.4 |
| MS.gene068009.t1 | AT4G34240 | 25.183 | 409 | 270 | 14 | 79 | 474 | 65 | 450 | 7.15e-18 | 87.0 |
Find 124 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGGGTTCCCAATCTTAT+TGG | 0.207386 | 4.3:-21040199 | MS.gene068009:CDS |
| ATTTGGTGTGCAGTCTAATA+TGG | 0.210485 | 4.3:-21038380 | MS.gene068009:intron |
| GCTTTAGTTGCTGCTGGTTT+TGG | 0.210605 | 4.3:-21038301 | MS.gene068009:CDS |
| CTTCCACTGATCGCTATAAA+AGG | 0.210956 | 4.3:-21040216 | MS.gene068009:CDS |
| CTCTATAATGCTTGCAGAAT+TGG | 0.220408 | 4.3:-21039113 | MS.gene068009:CDS |
| GCTTCTATATTTACTACTTC+TGG | 0.230981 | 4.3:-21036625 | MS.gene068009:CDS |
| AAAGGGTTCCCAATCTTATT+GGG | 0.284247 | 4.3:-21040198 | MS.gene068009:CDS |
| GGAGATGTGTTTCGTGGTTT+AGG | 0.290732 | 4.3:-21039686 | MS.gene068009:intron |
| CAAACCTGTTTGCTGATAAC+TGG | 0.309419 | 4.3:+21037760 | None:intergenic |
| GGCAACAAGGCGTCATTTGC+TGG | 0.317826 | 4.3:-21036293 | MS.gene068009:CDS |
| GCTGGCGATCTCAATTTCTA+TGG | 0.319835 | 4.3:-21036275 | MS.gene068009:intron |
| ACACGTTGGCGCGTCGTAAC+TGG | 0.345070 | 4.3:+21039931 | None:intergenic |
| CTTCAGTGTCTTTCCTTGTT+CGG | 0.357016 | 4.3:+21039718 | None:intergenic |
| AGCGTTTACTTTAAGAGCTT+TGG | 0.358538 | 4.3:+21037810 | None:intergenic |
| ATGCCTCAGATCTCTGCTTT+CGG | 0.359917 | 4.3:-21040271 | MS.gene068009:CDS |
| ACCTCCATGAAAAGAAGAAC+TGG | 0.370811 | 4.3:+21036899 | None:intergenic |
| GTGCACAGATTAGTTCAATC+TGG | 0.390956 | 4.3:-21037615 | MS.gene068009:CDS |
| ATTGGAGCCAACAAATGATA+TGG | 0.397690 | 4.3:+21038768 | None:intergenic |
| AATGGCAAAGGAACTGGAAT+AGG | 0.399481 | 4.3:+21036329 | None:intergenic |
| TGTTGAATTGTAGGCAAAGC+AGG | 0.414067 | 4.3:-21035952 | MS.gene068009:intron |
| ATTAAAGCCATATCATTTGT+TGG | 0.414988 | 4.3:-21038775 | MS.gene068009:CDS |
| GTGGAACATGCTTGTGGAAT+GGG | 0.416900 | 4.3:-21039551 | MS.gene068009:CDS |
| ATCCACAATGGAATCATTGC+AGG | 0.418409 | 4.3:+21039422 | None:intergenic |
| TCTTCCATCAAGCAGTAGTC+TGG | 0.420204 | 4.3:+21037578 | None:intergenic |
| AGCTAAAGGGAAGCGTGTTC+AGG | 0.424616 | 4.3:-21038479 | MS.gene068009:intron |
| GCAGAATTGGCACTGGAAGC+TGG | 0.430921 | 4.3:-21039100 | MS.gene068009:CDS |
| TGGTCCAGTTATCAGCAAAC+AGG | 0.440028 | 4.3:-21037764 | MS.gene068009:intron |
| GTAAATGCTTTAGTTGCTGC+TGG | 0.441142 | 4.3:-21038307 | MS.gene068009:CDS |
| TCACCTGGGTCTTTCTCTGA+TGG | 0.443595 | 4.3:+21039356 | None:intergenic |
| AAATTGCCAGATTCATATCC+TGG | 0.446066 | 4.3:+21037102 | None:intergenic |
| TAGGTCCCAGGATATGAATC+TGG | 0.446613 | 4.3:-21037108 | MS.gene068009:CDS |
| GACTGAGATTGAGGCTGGGC+AGG | 0.446706 | 4.3:-21036581 | MS.gene068009:intron |
| TTTACATCATTTAGAGGTGG+TGG | 0.451994 | 4.3:-21039570 | MS.gene068009:intron |
| GGTGTCTTAAATGTTGTTCA+TGG | 0.452942 | 4.3:-21039067 | MS.gene068009:CDS |
| GGTGCCAGACTACTGCTTGA+TGG | 0.455239 | 4.3:-21037582 | MS.gene068009:CDS |
| TTTCAGACTGAGATTGAGGC+TGG | 0.456700 | 4.3:-21036586 | MS.gene068009:CDS |
| GTTGAGCCGCTGTTGAGAAA+TGG | 0.457193 | 4.3:+21040242 | None:intergenic |
| AGCTGCTGGGCAAAGGTGCA+TGG | 0.458588 | 4.3:-21038278 | MS.gene068009:CDS |
| ACGGAACCTGATGCAGATCT+TGG | 0.459081 | 4.3:-21037784 | MS.gene068009:CDS |
| TTTGGTGTGCAGTCTAATAT+GGG | 0.459672 | 4.3:-21038379 | MS.gene068009:intron |
| GGAGCTTATACGCAGAGATA+TGG | 0.460147 | 4.3:-21039893 | MS.gene068009:intron |
| TGCTGTATCTGCAGCTAAGA+AGG | 0.460432 | 4.3:-21039977 | MS.gene068009:CDS |
| TATTCAAGAGCAGCAGCTAA+AGG | 0.462757 | 4.3:-21038493 | MS.gene068009:CDS |
| ATCCCAGCACAAACACCAAT+TGG | 0.470380 | 4.3:+21039461 | None:intergenic |
| ATTCAAGAGCAGCAGCTAAA+GGG | 0.475145 | 4.3:-21038492 | MS.gene068009:CDS |
| AACTCATCATCCGTAGTCAA+TGG | 0.477816 | 4.3:+21040006 | None:intergenic |
| ATTTCCAACAGGTATGGAAA+TGG | 0.478187 | 4.3:-21036649 | MS.gene068009:intron |
| CTACTTCTGGTGTTGCTGCT+AGG | 0.478222 | 4.3:-21036612 | MS.gene068009:CDS |
| GAACCAATTGGTGTTTGTGC+TGG | 0.479759 | 4.3:-21039464 | MS.gene068009:CDS |
| TGGAATGGGAACTCTACAAA+TGG | 0.483756 | 4.3:-21039537 | MS.gene068009:CDS |
| CTGGAAGCTGGTTTGCCTGA+GGG | 0.487867 | 4.3:-21039088 | MS.gene068009:CDS |
| CACTTACAGGGTTTAAAACA+TGG | 0.492044 | 4.3:+21040140 | None:intergenic |
| TGCACAGATTAGTTCAATCT+GGG | 0.495573 | 4.3:-21037614 | MS.gene068009:CDS |
| GAAATTTCAGACTGAGATTG+AGG | 0.497380 | 4.3:-21036590 | MS.gene068009:CDS |
| GGAATGGGAACTCTACAAAT+GGG | 0.498031 | 4.3:-21039536 | MS.gene068009:CDS |
| TATCTCTGCGTATAAGCTCC+TGG | 0.499342 | 4.3:+21039896 | None:intergenic |
| TTATCTTCAGGCTGATAGCT+TGG | 0.499596 | 4.3:-21036774 | MS.gene068009:intron |
| AATATCGTCATCATCACAAA+TGG | 0.501231 | 4.3:+21038795 | None:intergenic |
| TTATAGCGATCAGTGGAAGA+TGG | 0.504808 | 4.3:+21040220 | None:intergenic |
| ACGTGTTATGTTGAAGCTCC+AGG | 0.512753 | 4.3:-21039914 | MS.gene068009:CDS |
| AGTGATATTTGATAAGATAG+TGG | 0.516177 | 4.3:+21037071 | None:intergenic |
| TATAAGACAACTTACAACAT+TGG | 0.520923 | 4.3:+21038750 | None:intergenic |
| TTCCACTGATCGCTATAAAA+GGG | 0.522326 | 4.3:-21040215 | MS.gene068009:CDS |
| TTGAGCCGCTGTTGAGAAAT+GGG | 0.523015 | 4.3:+21040243 | None:intergenic |
| GTGATATTTGATAAGATAGT+GGG | 0.524228 | 4.3:+21037072 | None:intergenic |
| GTAGCATCAATATTTGCGTC+TGG | 0.524576 | 4.3:+21038331 | None:intergenic |
| ACTGGAAGCTGGTTTGCCTG+AGG | 0.526090 | 4.3:-21039089 | MS.gene068009:CDS |
| AACCAATTGGTGTTTGTGCT+GGG | 0.527195 | 4.3:-21039463 | MS.gene068009:CDS |
| TTGTGGGAGGTTCACAAGCA+TGG | 0.531533 | 4.3:-21038237 | MS.gene068009:intron |
| GCTCAAGGAGATGTGTTTCG+TGG | 0.534549 | 4.3:-21039692 | MS.gene068009:CDS |
| GCTTGATGGAAGAAATATAG+TGG | 0.542955 | 4.3:-21037568 | MS.gene068009:intron |
| AATGCTTGCAGAATTGGCAC+TGG | 0.543066 | 4.3:-21039107 | MS.gene068009:CDS |
| GGTGGAACATGCTTGTGGAA+TGG | 0.548358 | 4.3:-21039552 | MS.gene068009:CDS |
| TTCGCAAGTTCCATTGACTA+CGG | 0.550198 | 4.3:-21040016 | MS.gene068009:CDS |
| CAGTGTCTTTCCTTGTTCGG+TGG | 0.551950 | 4.3:+21039721 | None:intergenic |
| CTAAGAAGGCATTTCCGTCA+TGG | 0.551971 | 4.3:-21039963 | MS.gene068009:CDS |
| ACTGGACCAAGATCTGCATC+AGG | 0.552636 | 4.3:+21037778 | None:intergenic |
| AACAATAACTCAGCAGTGGA+AGG | 0.553106 | 4.3:-21035905 | MS.gene068009:CDS |
| GTTGAATTGTAGGCAAAGCA+GGG | 0.553526 | 4.3:-21035951 | MS.gene068009:intron |
| CTTAATATAACCACCGAACA+AGG | 0.558754 | 4.3:-21039731 | MS.gene068009:CDS |
| CAATTCTGCAAGCATTATAG+AGG | 0.558839 | 4.3:+21039114 | None:intergenic |
| AAGGGTTCCCAATCTTATTG+GGG | 0.562322 | 4.3:-21040197 | MS.gene068009:CDS |
| TACAGTGTCAGAGAACCAAT+TGG | 0.564839 | 4.3:-21039476 | MS.gene068009:CDS |
| TTTCCCGTGGCTGTTACTTG+TGG | 0.569235 | 4.3:-21039398 | MS.gene068009:CDS |
| ACAACATTTAAGACACCCTC+AGG | 0.576285 | 4.3:+21039073 | None:intergenic |
| TTTCTCATTCACTGGCAACA+AGG | 0.579842 | 4.3:-21036306 | MS.gene068009:CDS |
| ATCATTGCAGGAAAGTTGAA+AGG | 0.582337 | 4.3:+21039434 | None:intergenic |
| TCTTAAAGTAAACGCTGGAA+CGG | 0.592374 | 4.3:-21037803 | MS.gene068009:CDS |
| TTCAGACTGAGATTGAGGCT+GGG | 0.595013 | 4.3:-21036585 | MS.gene068009:CDS |
| TGCCGACATGGAGTGCTACA+AGG | 0.595715 | 4.3:-21037049 | MS.gene068009:intron |
| ATCAAATATCACTGCCGACA+TGG | 0.599985 | 4.3:-21037061 | MS.gene068009:CDS |
| CAGCAGTGGAAGGATTCAGT+TGG | 0.600671 | 4.3:-21035895 | MS.gene068009:CDS |
| TTGCCACAAGTAACAGCCAC+GGG | 0.603658 | 4.3:+21039395 | None:intergenic |
| ACTGGAGTGTTACGCCATGA+CGG | 0.604165 | 4.3:+21039949 | None:intergenic |
| GTGCATGACAAATAGGTCCC+AGG | 0.604335 | 4.3:-21037120 | MS.gene068009:intron |
| TATGTTTCAAATGTTTCACA+TGG | 0.608715 | 4.3:-21039509 | MS.gene068009:CDS |
| CCTCCATGAAAAGAAGAACT+GGG | 0.614002 | 4.3:+21036900 | None:intergenic |
| AATTGCCAGATTCATATCCT+GGG | 0.614209 | 4.3:+21037103 | None:intergenic |
| TTGGTGTGCAGTCTAATATG+GGG | 0.615382 | 4.3:-21038378 | MS.gene068009:intron |
| TCAAAACAATAACTCAGCAG+TGG | 0.623442 | 4.3:-21035909 | MS.gene068009:CDS |
| AAACCATCAGAGAAAGACCC+AGG | 0.627538 | 4.3:-21039359 | MS.gene068009:intron |
| TTCCTGCAATGATTCCATTG+TGG | 0.632608 | 4.3:-21039424 | MS.gene068009:CDS |
| AAGACACTGAAGGATGCTCA+AGG | 0.637657 | 4.3:-21039707 | MS.gene068009:CDS |
| GTTCAATCTGGGGTCGACAG+TGG | 0.639096 | 4.3:-21037603 | MS.gene068009:CDS |
| AAAGCTCTTAAAGTAAACGC+TGG | 0.643147 | 4.3:-21037808 | MS.gene068009:CDS |
| GCCACGGGAAACATCCACAA+TGG | 0.653277 | 4.3:+21039410 | None:intergenic |
| AGGGTTCCCAATCTTATTGG+GGG | 0.654274 | 4.3:-21040196 | MS.gene068009:CDS |
| TCCATTGTGGATGTTTCCCG+TGG | 0.654647 | 4.3:-21039411 | MS.gene068009:CDS |
| GAATGGGAACTCTACAAATG+GGG | 0.655252 | 4.3:-21039535 | MS.gene068009:CDS |
| GTTCCGAAAGCAGAGATCTG+AGG | 0.658576 | 4.3:+21040268 | None:intergenic |
| TGGCAGTAGCAAGATTAACA+TGG | 0.661984 | 4.3:-21035875 | MS.gene068009:CDS |
| TTGAATTGTAGGCAAAGCAG+GGG | 0.663336 | 4.3:-21035950 | MS.gene068009:intron |
| TACCTTGTAGCACTCCATGT+CGG | 0.672475 | 4.3:+21037047 | None:intergenic |
| CGAACAAGGAAAGACACTGA+AGG | 0.677513 | 4.3:-21039717 | MS.gene068009:CDS |
| ATTGCCACAAGTAACAGCCA+CGG | 0.678517 | 4.3:+21039394 | None:intergenic |
| TGATATTTGATAAGATAGTG+GGG | 0.681135 | 4.3:+21037073 | None:intergenic |
| AGCCGCTGTTGAGAAATGGG+AGG | 0.683940 | 4.3:+21040246 | None:intergenic |
| TGGTGTGCAGTCTAATATGG+GGG | 0.686626 | 4.3:-21038377 | MS.gene068009:intron |
| AACCTCCCATTTCTCAACAG+CGG | 0.687198 | 4.3:-21040248 | MS.gene068009:CDS |
| AATGGGAACTCTACAAATGG+GGG | 0.689460 | 4.3:-21039534 | MS.gene068009:CDS |
| GAGGTGGTGGAACATGCTTG+TGG | 0.694713 | 4.3:-21039557 | MS.gene068009:CDS |
| GCACAGATTAGTTCAATCTG+GGG | 0.697298 | 4.3:-21037613 | MS.gene068009:CDS |
| GGAGCTTCAACATAACACGT+TGG | 0.699352 | 4.3:+21039917 | None:intergenic |
| TCGCAGCTTTCTATTCAACG+AGG | 0.767158 | 4.3:-21040410 | MS.gene068009:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATCTATCATTATAT+GGG | + | chr4.3:21039059-21039078 | None:intergenic | 10.0% |
| !! | ATTTATTTGTTTAAATACAT+TGG | - | chr4.3:21040058-21040077 | MS.gene068009:intron | 10.0% |
| !! | TTTATTTGTTTAAATACATT+GGG | - | chr4.3:21040059-21040078 | MS.gene068009:intron | 10.0% |
| !!! | AATCTTTTGTTTTTTTTAAA+CGG | + | chr4.3:21038268-21038287 | None:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr4.3:21040079-21040098 | MS.gene068009:intron | 100.0% |
| !! | AAAACAAAAACTGTAAATTA+AGG | + | chr4.3:21036157-21036176 | None:intergenic | 15.0% |
| !! | ATACTAAAATACAACATAAA+GGG | + | chr4.3:21037705-21037724 | None:intergenic | 15.0% |
| !! | CAAAATAATCTATCATTATA+TGG | + | chr4.3:21039060-21039079 | None:intergenic | 15.0% |
| !! | TAATAAATCTAGATCAATTT+CGG | + | chr4.3:21038152-21038171 | None:intergenic | 15.0% |
| !! | TATACTAAAATACAACATAA+AGG | + | chr4.3:21037706-21037725 | None:intergenic | 15.0% |
| !! | TCATTCAAAAATTATATCTA+CGG | - | chr4.3:21038543-21038562 | MS.gene068009:intron | 15.0% |
| !! | TTATTTGTTTAAATACATTG+GGG | - | chr4.3:21040060-21040079 | MS.gene068009:intron | 15.0% |
| !!! | TTTTAATTTACATCATTTAG+AGG | - | chr4.3:21036686-21036705 | MS.gene068009:intron | 15.0% |
| !!! | TTTTATCATAATTCCATTAT+TGG | - | chr4.3:21038219-21038238 | MS.gene068009:intron | 15.0% |
| !!! | TTTTTCTTATTATATGTTGT+AGG | - | chr4.3:21040267-21040286 | MS.gene068009:CDS | 15.0% |
| !! | ACAAGTATTTATCAAACATA+CGG | - | chr4.3:21039538-21039557 | MS.gene068009:CDS | 20.0% |
| !! | ACAATACATTATTCTATTTG+TGG | + | chr4.3:21039861-21039880 | None:intergenic | 20.0% |
| !! | ATAGAAAGATATATAGAAGA+GGG | - | chr4.3:21037640-21037659 | MS.gene068009:intron | 20.0% |
| !! | ATATATAGCTGTTTAACATA+AGG | + | chr4.3:21039576-21039595 | None:intergenic | 20.0% |
| !! | ATGTTTCTTAAAATTCTTAC+CGG | - | chr4.3:21038604-21038623 | MS.gene068009:intron | 20.0% |
| !! | TACTAAAATACAACATAAAG+GGG | + | chr4.3:21037704-21037723 | None:intergenic | 20.0% |
| !! | TATTTGTTTAAATACATTGG+GGG | - | chr4.3:21040061-21040080 | MS.gene068009:intron | 20.0% |
| !! | TGAAAACAAATAAGATTCTA+AGG | + | chr4.3:21039406-21039425 | None:intergenic | 20.0% |
| !!! | AATGATAATGATACTCATTA+TGG | - | chr4.3:21039883-21039902 | MS.gene068009:intron | 20.0% |
| !!! | ATAGTTATGCTCATAATTTT+GGG | - | chr4.3:21036644-21036663 | MS.gene068009:intron | 20.0% |
| !!! | ATTTTCTGCATAATCATATA+GGG | - | chr4.3:21038190-21038209 | MS.gene068009:intron | 20.0% |
| !!! | GTAACATTATAATGGAAAAA+GGG | - | chr4.3:21036981-21037000 | MS.gene068009:intron | 20.0% |
| !!! | TAATCAAAATCAATTTTCCA+AGG | + | chr4.3:21038369-21038388 | None:intergenic | 20.0% |
| !!! | TCTATTTCAACTTTGTTTTT+AGG | - | chr4.3:21036497-21036516 | MS.gene068009:intron | 20.0% |
| !!! | TGTAACATTATAATGGAAAA+AGG | - | chr4.3:21036980-21036999 | MS.gene068009:intron | 20.0% |
| !!! | TTTACTGATTATACCAATAA+TGG | + | chr4.3:21038235-21038254 | None:intergenic | 20.0% |
| !!! | TTTATTTTATCTTATCCTGT+CGG | + | chr4.3:21038950-21038969 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTTTTTAAACGGA+AGG | + | chr4.3:21038264-21038283 | None:intergenic | 20.0% |
| ! | AAATGTGAAAGTTGTTCAAA+GGG | - | chr4.3:21037344-21037363 | MS.gene068009:intron | 25.0% |
| ! | AACATGTAATGATATGAAGT+TGG | - | chr4.3:21037847-21037866 | MS.gene068009:intron | 25.0% |
| ! | AAGGAAAAAAAAACACTTAC+AGG | + | chr4.3:21036138-21036157 | None:intergenic | 25.0% |
| ! | AATATATACTACTTCTTGGA+AGG | - | chr4.3:21039706-21039725 | MS.gene068009:CDS | 25.0% |
| ! | AATCATATTGCATTATTGCA+TGG | - | chr4.3:21039797-21039816 | MS.gene068009:intron | 25.0% |
| ! | ACTAAAATACAACATAAAGG+GGG | + | chr4.3:21037703-21037722 | None:intergenic | 25.0% |
| ! | AGCATAGTGTAACATTATAA+TGG | - | chr4.3:21036973-21036992 | MS.gene068009:intron | 25.0% |
| ! | AGGAAAAAAAAACACTTACA+GGG | + | chr4.3:21036137-21036156 | None:intergenic | 25.0% |
| ! | AGTGATATTTGATAAGATAG+TGG | + | chr4.3:21039194-21039213 | None:intergenic | 25.0% |
| ! | ATACAATAACTCAGTTGAAA+AGG | + | chr4.3:21038742-21038761 | None:intergenic | 25.0% |
| ! | ATCATTATATGGGAAAACAA+AGG | + | chr4.3:21039049-21039068 | None:intergenic | 25.0% |
| ! | ATGCAATAATGCAATATGAT+TGG | + | chr4.3:21039798-21039817 | None:intergenic | 25.0% |
| ! | ATTAAAGCCATATCATTTGT+TGG | - | chr4.3:21037487-21037506 | MS.gene068009:intron | 25.0% |
| ! | ATTTGTTTAAATACATTGGG+GGG | - | chr4.3:21040062-21040081 | MS.gene068009:intron | 25.0% |
| ! | CAATAGTAACTTTATTCTAC+AGG | - | chr4.3:21039002-21039021 | MS.gene068009:intron | 25.0% |
| ! | CAGATTGAGAAAATAATACA+AGG | + | chr4.3:21036952-21036971 | None:intergenic | 25.0% |
| ! | CAGTTGTAAAATGATCATTA+AGG | + | chr4.3:21040126-21040145 | None:intergenic | 25.0% |
| ! | CTATCTAATATTTGTCTGAT+TGG | - | chr4.3:21036196-21036215 | MS.gene068009:intron | 25.0% |
| ! | GATAAGCAATCCTTAAAATT+GGG | + | chr4.3:21039113-21039132 | None:intergenic | 25.0% |
| ! | GATAGAAAGATATATAGAAG+AGG | - | chr4.3:21037639-21037658 | MS.gene068009:intron | 25.0% |
| ! | GATTTGAATTGTTGAATTGT+AGG | - | chr4.3:21040301-21040320 | MS.gene068009:intron | 25.0% |
| ! | GGTAAATATATACTACTTCT+TGG | - | chr4.3:21039702-21039721 | MS.gene068009:CDS | 25.0% |
| ! | GTGATATTTGATAAGATAGT+GGG | + | chr4.3:21039193-21039212 | None:intergenic | 25.0% |
| ! | GTTGGCCAATTAATAAAATT+TGG | - | chr4.3:21037865-21037884 | MS.gene068009:intron | 25.0% |
| ! | TAAAATCAATCATGCTAAAC+AGG | - | chr4.3:21038966-21038985 | MS.gene068009:intron | 25.0% |
| ! | TAAATGTGAAAGTTGTTCAA+AGG | - | chr4.3:21037343-21037362 | MS.gene068009:intron | 25.0% |
| ! | TAATTTACATCATTTAGAGG+TGG | - | chr4.3:21036689-21036708 | MS.gene068009:intron | 25.0% |
| ! | TACAATAACTCAGTTGAAAA+GGG | + | chr4.3:21038741-21038760 | None:intergenic | 25.0% |
| ! | TATAAGACAACTTACAACAT+TGG | + | chr4.3:21037515-21037534 | None:intergenic | 25.0% |
| ! | TATATTAACCAATTTCACTG+AGG | + | chr4.3:21037827-21037846 | None:intergenic | 25.0% |
| ! | TATGTTTCAAATGTTTCACA+TGG | - | chr4.3:21036753-21036772 | MS.gene068009:CDS | 25.0% |
| ! | TGATAAGCAATCCTTAAAAT+TGG | + | chr4.3:21039114-21039133 | None:intergenic | 25.0% |
| ! | TGATATTTGATAAGATAGTG+GGG | + | chr4.3:21039192-21039211 | None:intergenic | 25.0% |
| ! | TGATCTAGATTTATTAAACG+TGG | - | chr4.3:21038156-21038175 | MS.gene068009:intron | 25.0% |
| !! | AATGATCATTTTACAACTGT+TGG | - | chr4.3:21040127-21040146 | MS.gene068009:intron | 25.0% |
| !! | CATAGTTATGCTCATAATTT+TGG | - | chr4.3:21036643-21036662 | MS.gene068009:intron | 25.0% |
| !! | CATTTTCTGCATAATCATAT+AGG | - | chr4.3:21038189-21038208 | MS.gene068009:intron | 25.0% |
| !! | CTTGTATTATTTTCTCAATC+TGG | - | chr4.3:21036950-21036969 | MS.gene068009:intron | 25.0% |
| !! | GAAGTCCTTATTTGTATTAA+AGG | - | chr4.3:21037732-21037751 | MS.gene068009:intron | 25.0% |
| !! | GCACACCAAATTTTATTAAT+TGG | + | chr4.3:21037873-21037892 | None:intergenic | 25.0% |
| !! | TACAGCAAAGTTTGTTTAAA+AGG | + | chr4.3:21037044-21037063 | None:intergenic | 25.0% |
| !!! | CTCTAACATTGTTTTTCATT+CGG | - | chr4.3:21037005-21037024 | MS.gene068009:intron | 25.0% |
| !!! | GGTAATAGTTTGCAAAATTT+TGG | + | chr4.3:21037681-21037700 | None:intergenic | 25.0% |
| !!! | GTTTTTGTTGATAATGCTTA+TGG | + | chr4.3:21039520-21039539 | None:intergenic | 25.0% |
| !!! | TCTGTTTTGTTTTTATCTTC+AGG | - | chr4.3:21039476-21039495 | MS.gene068009:CDS | 25.0% |
| !!! | TTTTTTTTATCTTTTGGCCT+TGG | - | chr4.3:21038349-21038368 | MS.gene068009:CDS | 25.0% |
| AAAAGAGATGATAGCATACA+TGG | + | chr4.3:21037224-21037243 | None:intergenic | 30.0% | |
| AAACCATGTATCTAATGCAT+TGG | + | chr4.3:21038883-21038902 | None:intergenic | 30.0% | |
| AAAGAGATGATAGCATACAT+GGG | + | chr4.3:21037223-21037242 | None:intergenic | 30.0% | |
| AACCATGTATCTAATGCATT+GGG | + | chr4.3:21038882-21038901 | None:intergenic | 30.0% | |
| AATACGATGAAAACACCAAA+TGG | + | chr4.3:21037317-21037336 | None:intergenic | 30.0% | |
| AATATCGTCATCATCACAAA+TGG | + | chr4.3:21037470-21037489 | None:intergenic | 30.0% | |
| ACAACTCCTAATTCAAATAC+TGG | + | chr4.3:21039765-21039784 | None:intergenic | 30.0% | |
| CACTAATTAAATGTGCTCAT+GGG | - | chr4.3:21037283-21037302 | MS.gene068009:intron | 30.0% | |
| CAGTTGAAAAGGGAAATTAA+GGG | + | chr4.3:21038731-21038750 | None:intergenic | 30.0% | |
| CTAAAATACAACATAAAGGG+GGG | + | chr4.3:21037702-21037721 | None:intergenic | 30.0% | |
| GCTTCTATATTTACTACTTC+TGG | - | chr4.3:21039637-21039656 | MS.gene068009:intron | 30.0% | |
| GGATTGATATCCTTGATTAT+TGG | - | chr4.3:21037425-21037444 | MS.gene068009:intron | 30.0% | |
| TAAAATTGGGCAGAAGAAAT+GGG | + | chr4.3:21039100-21039119 | None:intergenic | 30.0% | |
| TAATCAAAGGAGAGAAAACA+AGG | + | chr4.3:21038922-21038941 | None:intergenic | 30.0% | |
| TAGTGAGTATCAAAAGAAAC+AGG | + | chr4.3:21037268-21037287 | None:intergenic | 30.0% | |
| TCACTAATTAAATGTGCTCA+TGG | - | chr4.3:21037282-21037301 | MS.gene068009:intron | 30.0% | |
| TCAGTTGAAAAGGGAAATTA+AGG | + | chr4.3:21038732-21038751 | None:intergenic | 30.0% | |
| TCCAGCCTTTAATACAAATA+AGG | + | chr4.3:21037740-21037759 | None:intergenic | 30.0% | |
| TCTATCTAAGCACATTCAAA+CGG | + | chr4.3:21037625-21037644 | None:intergenic | 30.0% | |
| TTAAAATTGGGCAGAAGAAA+TGG | + | chr4.3:21039101-21039120 | None:intergenic | 30.0% | |
| TTCCAACCAGTATTTGAATT+AGG | - | chr4.3:21039756-21039775 | MS.gene068009:intron | 30.0% | |
| TTTATGCTAAACCATCTAGT+GGG | - | chr4.3:21037079-21037098 | MS.gene068009:CDS | 30.0% | |
| TTTGTTTAAATACATTGGGG+GGG | - | chr4.3:21040063-21040082 | MS.gene068009:intron | 30.0% | |
| ! | AAACAAACTTTGCTGTAGTT+GGG | - | chr4.3:21037047-21037066 | MS.gene068009:intron | 30.0% |
| ! | ACTTTTCACAATAAGCATGA+CGG | + | chr4.3:21036464-21036483 | None:intergenic | 30.0% |
| ! | ATTTCTTCTGCCCAATTTTA+AGG | - | chr4.3:21039100-21039119 | MS.gene068009:CDS | 30.0% |
| ! | TAAACAAACTTTGCTGTAGT+TGG | - | chr4.3:21037046-21037065 | MS.gene068009:intron | 30.0% |
| ! | TATGAATCTGGCAATTTTGT+TGG | - | chr4.3:21039166-21039185 | MS.gene068009:intron | 30.0% |
| ! | TCCTTATTTGTATTAAAGGC+TGG | - | chr4.3:21037736-21037755 | MS.gene068009:intron | 30.0% |
| ! | TGCGTATAAATTGATTCACT+AGG | - | chr4.3:21038812-21038831 | MS.gene068009:intron | 30.0% |
| ! | TTTTATGCTAAACCATCTAG+TGG | - | chr4.3:21037078-21037097 | MS.gene068009:CDS | 30.0% |
| !! | ATTTTACAACTGTTGGTGAA+AGG | - | chr4.3:21040134-21040153 | MS.gene068009:intron | 30.0% |
| !! | GAGTTTGACTTGTAACTTTA+AGG | + | chr4.3:21040174-21040193 | None:intergenic | 30.0% |
| !! | TCATTTTTCCTCAGTGAAAT+TGG | - | chr4.3:21037816-21037835 | MS.gene068009:CDS | 30.0% |
| !! | TGATATTTGTTGTTTGTTCC+AGG | - | chr4.3:21037123-21037142 | MS.gene068009:intron | 30.0% |
| !! | TTCTGACAAGATTGCTTTTA+AGG | + | chr4.3:21037586-21037605 | None:intergenic | 30.0% |
| !!! | ATTGTGCTTTGTTTTTCTCA+CGG | - | chr4.3:21037404-21037423 | MS.gene068009:intron | 30.0% |
| AAAAGGGTTCCCAATCTTAT+TGG | - | chr4.3:21036063-21036082 | MS.gene068009:intron | 35.0% | |
| AAAATTGGGCAGAAGAAATG+GGG | + | chr4.3:21039099-21039118 | None:intergenic | 35.0% | |
| AAAGCTCTTAAAGTAAACGC+TGG | - | chr4.3:21038454-21038473 | MS.gene068009:intron | 35.0% | |
| AAAGGGTTCCCAATCTTATT+GGG | - | chr4.3:21036064-21036083 | MS.gene068009:intron | 35.0% | |
| AAATTGCCAGATTCATATCC+TGG | + | chr4.3:21039163-21039182 | None:intergenic | 35.0% | |
| AACACAGAAATCGTGGTAAA+CGG | + | chr4.3:21038081-21038100 | None:intergenic | 35.0% | |
| AATTGCCAGATTCATATCCT+GGG | + | chr4.3:21039162-21039181 | None:intergenic | 35.0% | |
| ACATCAACTCTCTATTCTGA+AGG | + | chr4.3:21039285-21039304 | None:intergenic | 35.0% | |
| ACCATGTATCTAATGCATTG+GGG | + | chr4.3:21038881-21038900 | None:intergenic | 35.0% | |
| ATCATTGCAGGAAAGTTGAA+AGG | + | chr4.3:21036831-21036850 | None:intergenic | 35.0% | |
| ATGATACTCATTATGGATCC+TGG | - | chr4.3:21039890-21039909 | MS.gene068009:intron | 35.0% | |
| ATTGGAGCCAACAAATGATA+TGG | + | chr4.3:21037497-21037516 | None:intergenic | 35.0% | |
| ATTTCCAACAGGTATGGAAA+TGG | - | chr4.3:21039613-21039632 | MS.gene068009:intron | 35.0% | |
| CAAGTCAAACTCTTACTACT+AGG | - | chr4.3:21040182-21040201 | MS.gene068009:CDS | 35.0% | |
| CAATTCTGCAAGCATTATAG+AGG | + | chr4.3:21037151-21037170 | None:intergenic | 35.0% | |
| CTAGAGAAAATACCTTGTGA+CGG | - | chr4.3:21038290-21038309 | MS.gene068009:CDS | 35.0% | |
| CTCCTAATTCAAATACTGGT+TGG | + | chr4.3:21039761-21039780 | None:intergenic | 35.0% | |
| CTCTATAATGCTTGCAGAAT+TGG | - | chr4.3:21037149-21037168 | MS.gene068009:intron | 35.0% | |
| CTTAATATAACCACCGAACA+AGG | - | chr4.3:21036531-21036550 | MS.gene068009:intron | 35.0% | |
| CTTACCAATCTCAAATCTCA+AGG | - | chr4.3:21039242-21039261 | MS.gene068009:intron | 35.0% | |
| CTTACTCTATCATTTCCAAC+AGG | - | chr4.3:21039602-21039621 | MS.gene068009:intron | 35.0% | |
| GAAATTTCAGACTGAGATTG+AGG | - | chr4.3:21039672-21039691 | MS.gene068009:intron | 35.0% | |
| GCTTGATGGAAGAAATATAG+TGG | - | chr4.3:21038694-21038713 | MS.gene068009:intron | 35.0% | |
| GGTGTCTTAAATGTTGTTCA+TGG | - | chr4.3:21037195-21037214 | MS.gene068009:intron | 35.0% | |
| GTCTTTAACATTACACACAC+AGG | - | chr4.3:21039326-21039345 | MS.gene068009:intron | 35.0% | |
| GTGAATGAGAAAAATGGCAA+AGG | + | chr4.3:21039948-21039967 | None:intergenic | 35.0% | |
| TCAAAACAATAACTCAGCAG+TGG | - | chr4.3:21040353-21040372 | MS.gene068009:intron | 35.0% | |
| TCTATCATTTCCAACAGGTA+TGG | - | chr4.3:21039607-21039626 | MS.gene068009:intron | 35.0% | |
| TCTTAAAGTAAACGCTGGAA+CGG | - | chr4.3:21038459-21038478 | MS.gene068009:intron | 35.0% | |
| TTCATACGTGCATGACAAAT+AGG | - | chr4.3:21039135-21039154 | MS.gene068009:intron | 35.0% | |
| TTCCACTGATCGCTATAAAA+GGG | - | chr4.3:21036047-21036066 | MS.gene068009:intron | 35.0% | |
| TTCTGCATAATCATATAGGG+TGG | - | chr4.3:21038193-21038212 | MS.gene068009:intron | 35.0% | |
| TTGCCAGTGAATGAGAAAAA+TGG | + | chr4.3:21039954-21039973 | None:intergenic | 35.0% | |
| TTGTTTAAATACATTGGGGG+GGG | - | chr4.3:21040064-21040083 | MS.gene068009:intron | 35.0% | |
| TTTAACATTACACACACAGG+AGG | - | chr4.3:21039329-21039348 | MS.gene068009:intron | 35.0% | |
| TTTACATCATTTAGAGGTGG+TGG | - | chr4.3:21036692-21036711 | MS.gene068009:intron | 35.0% | |
| ! | AGCGTTTACTTTAAGAGCTT+TGG | + | chr4.3:21038455-21038474 | None:intergenic | 35.0% |
| ! | ATTGCAGACAAGCTAGATTT+TGG | + | chr4.3:21040026-21040045 | None:intergenic | 35.0% |
| ! | CACTTACAGGGTTTAAAACA+TGG | + | chr4.3:21036125-21036144 | None:intergenic | 35.0% |
| ! | CATGACGATTGCATGATTTT+TGG | + | chr4.3:21037911-21037930 | None:intergenic | 35.0% |
| ! | GAAACCTTGAGATTTGAGAT+TGG | + | chr4.3:21039249-21039268 | None:intergenic | 35.0% |
| ! | TATCCTTGATTATTGGTGAC+AGG | - | chr4.3:21037432-21037451 | MS.gene068009:intron | 35.0% |
| ! | TGCACAGATTAGTTCAATCT+GGG | - | chr4.3:21038648-21038667 | MS.gene068009:intron | 35.0% |
| ! | TTTGGTGTGCAGTCTAATAT+GGG | - | chr4.3:21037883-21037902 | MS.gene068009:intron | 35.0% |
| !! | ATTTGGTGTGCAGTCTAATA+TGG | - | chr4.3:21037882-21037901 | MS.gene068009:intron | 35.0% |
| !!! | CTGTGTTGGCTTTTTTTACT+TGG | - | chr4.3:21038094-21038113 | MS.gene068009:intron | 35.0% |
| !!! | TTGCCATTTTTCTCATTCAC+TGG | - | chr4.3:21039948-21039967 | MS.gene068009:CDS | 35.0% |
| AAAAGCCAACACAGAAATCG+TGG | + | chr4.3:21038088-21038107 | None:intergenic | 40.0% | |
| AAACCTTCCCCCAATAAGAT+TGG | + | chr4.3:21036076-21036095 | None:intergenic | 40.0% | |
| AAATTGGGCAGAAGAAATGG+GGG | + | chr4.3:21039098-21039117 | None:intergenic | 40.0% | |
| AACAATAACTCAGCAGTGGA+AGG | - | chr4.3:21040357-21040376 | MS.gene068009:intron | 40.0% | |
| AACCTTCCCCCAATAAGATT+GGG | + | chr4.3:21036075-21036094 | None:intergenic | 40.0% | |
| AACTCATCATCCGTAGTCAA+TGG | + | chr4.3:21036259-21036278 | None:intergenic | 40.0% | |
| AAGGGTTCCCAATCTTATTG+GGG | - | chr4.3:21036065-21036084 | MS.gene068009:intron | 40.0% | |
| AATGGCAAAGGAACTGGAAT+AGG | + | chr4.3:21039936-21039955 | None:intergenic | 40.0% | |
| AATGGGAACTCTACAAATGG+GGG | - | chr4.3:21036728-21036747 | MS.gene068009:intron | 40.0% | |
| ACACAAATGTCTGTCTCATC+TGG | + | chr4.3:21039436-21039455 | None:intergenic | 40.0% | |
| ACCTCCATGAAAAGAAGAAC+TGG | + | chr4.3:21039366-21039385 | None:intergenic | 40.0% | |
| ACGGAGATGTATGGATTCAT+TGG | - | chr4.3:21038309-21038328 | MS.gene068009:CDS | 40.0% | |
| ACTAGATTCTCTGTACCACA+TGG | - | chr4.3:21039820-21039839 | MS.gene068009:intron | 40.0% | |
| ATAGAAAGCCAACATCACCT+GGG | + | chr4.3:21036923-21036942 | None:intergenic | 40.0% | |
| ATCAAATATCACTGCCGACA+TGG | - | chr4.3:21039201-21039220 | MS.gene068009:intron | 40.0% | |
| ATCCACAATGGAATCATTGC+AGG | + | chr4.3:21036843-21036862 | None:intergenic | 40.0% | |
| ATCCTCCACAATATTTGTGC+AGG | - | chr4.3:21038407-21038426 | MS.gene068009:intron | 40.0% | |
| ATGTGTTTCGTGGTTTAGGT+TGG | - | chr4.3:21036580-21036599 | MS.gene068009:intron | 40.0% | |
| ATTCAAGAGCAGCAGCTAAA+GGG | - | chr4.3:21037770-21037789 | MS.gene068009:CDS | 40.0% | |
| CATCCTGTCACCAATAATCA+AGG | + | chr4.3:21037438-21037457 | None:intergenic | 40.0% | |
| CCTCCATGAAAAGAAGAACT+GGG | + | chr4.3:21039365-21039384 | None:intergenic | 40.0% | |
| CTTCAGTGTCTTTCCTTGTT+CGG | + | chr4.3:21036547-21036566 | None:intergenic | 40.0% | |
| CTTCCACTGATCGCTATAAA+AGG | - | chr4.3:21036046-21036065 | MS.gene068009:intron | 40.0% | |
| GAATGGGAACTCTACAAATG+GGG | - | chr4.3:21036727-21036746 | MS.gene068009:intron | 40.0% | |
| GAGAAAAATGGCAAAGGAAC+TGG | + | chr4.3:21039942-21039961 | None:intergenic | 40.0% | |
| GATGAGACAGACATTTGTGT+TGG | - | chr4.3:21039436-21039455 | MS.gene068009:CDS | 40.0% | |
| GGAATGGGAACTCTACAAAT+GGG | - | chr4.3:21036726-21036745 | MS.gene068009:intron | 40.0% | |
| GTAAATGCTTTAGTTGCTGC+TGG | - | chr4.3:21037955-21037974 | MS.gene068009:intron | 40.0% | |
| GTAGCATCAATATTTGCGTC+TGG | + | chr4.3:21037934-21037953 | None:intergenic | 40.0% | |
| GTTGAATTGTAGGCAAAGCA+GGG | - | chr4.3:21040311-21040330 | MS.gene068009:intron | 40.0% | |
| GTTTACCACGATTTCTGTGT+TGG | - | chr4.3:21038080-21038099 | MS.gene068009:intron | 40.0% | |
| TACAGTGTCAGAGAACCAAT+TGG | - | chr4.3:21036786-21036805 | MS.gene068009:intron | 40.0% | |
| TATTCAAGAGCAGCAGCTAA+AGG | - | chr4.3:21037769-21037788 | MS.gene068009:CDS | 40.0% | |
| TCCCCAATGCATTAGATACA+TGG | - | chr4.3:21038877-21038896 | MS.gene068009:intron | 40.0% | |
| TCCTCCACAATATTTGTGCA+GGG | - | chr4.3:21038408-21038427 | MS.gene068009:intron | 40.0% | |
| TCTTACTACTAGGCTGATCA+TGG | - | chr4.3:21040192-21040211 | MS.gene068009:CDS | 40.0% | |
| TGATCGATGATCGTGTATCT+GGG | + | chr4.3:21035923-21035942 | None:intergenic | 40.0% | |
| TGGAATGGGAACTCTACAAA+TGG | - | chr4.3:21036725-21036744 | MS.gene068009:intron | 40.0% | |
| TGGCAGTAGCAAGATTAACA+TGG | - | chr4.3:21040387-21040406 | MS.gene068009:intron | 40.0% | |
| TGTTGAATTGTAGGCAAAGC+AGG | - | chr4.3:21040310-21040329 | MS.gene068009:intron | 40.0% | |
| TGTTTAAATACATTGGGGGG+GGG | - | chr4.3:21040065-21040084 | MS.gene068009:intron | 40.0% | |
| TTATAGCGATCAGTGGAAGA+TGG | + | chr4.3:21036045-21036064 | None:intergenic | 40.0% | |
| TTATCTTCAGGCTGATAGCT+TGG | - | chr4.3:21039488-21039507 | MS.gene068009:CDS | 40.0% | |
| TTCCTGCAATGATTCCATTG+TGG | - | chr4.3:21036838-21036857 | MS.gene068009:intron | 40.0% | |
| TTGAATTGTAGGCAAAGCAG+GGG | - | chr4.3:21040312-21040331 | MS.gene068009:intron | 40.0% | |
| TTGGTGTGCAGTCTAATATG+GGG | - | chr4.3:21037884-21037903 | MS.gene068009:intron | 40.0% | |
| TTTCTCATTCACTGGCAACA+AGG | - | chr4.3:21039956-21039975 | MS.gene068009:CDS | 40.0% | |
| ! | AACCAATTGGTGTTTGTGCT+GGG | - | chr4.3:21036799-21036818 | MS.gene068009:intron | 40.0% |
| ! | AACCCTTTTATAGCGATCAG+TGG | + | chr4.3:21036052-21036071 | None:intergenic | 40.0% |
| ! | ACAACATTTAAGACACCCTC+AGG | + | chr4.3:21037192-21037211 | None:intergenic | 40.0% |
| ! | ACAGGTTTGTTTACTCTCTC+TGG | - | chr4.3:21038516-21038535 | MS.gene068009:intron | 40.0% |
| ! | CAAACCTGTTTGCTGATAAC+TGG | + | chr4.3:21038505-21038524 | None:intergenic | 40.0% |
| ! | CACACACAGGAGGAAATTTT+TGG | - | chr4.3:21039339-21039358 | MS.gene068009:intron | 40.0% |
| ! | GCACAGATTAGTTCAATCTG+GGG | - | chr4.3:21038649-21038668 | MS.gene068009:intron | 40.0% |
| ! | GTGCACAGATTAGTTCAATC+TGG | - | chr4.3:21038647-21038666 | MS.gene068009:intron | 40.0% |
| ! | TCATGGGCTCTTTTTCCATT+TGG | - | chr4.3:21037299-21037318 | MS.gene068009:intron | 40.0% |
| ! | TTCGCAAGTTCCATTGACTA+CGG | - | chr4.3:21036246-21036265 | MS.gene068009:intron | 40.0% |
| ! | TTGTCTGATTGGCTGATCAT+AGG | - | chr4.3:21036207-21036226 | MS.gene068009:intron | 40.0% |
| !! | AAAATTCTTACCGGCTTCAC+AGG | - | chr4.3:21038613-21038632 | MS.gene068009:intron | 40.0% |
| !!! | CTCAGCACAGTTGTTTTTGT+GGG | - | chr4.3:21038009-21038028 | MS.gene068009:intron | 40.0% |
| !!! | TCTCAGCACAGTTGTTTTTG+TGG | - | chr4.3:21038008-21038027 | MS.gene068009:intron | 40.0% |
| !!! | TGCTTTTAAGGTCACAGAAG+AGG | + | chr4.3:21037574-21037593 | None:intergenic | 40.0% |
| AAAAGCCTCATCCCACTAGA+TGG | + | chr4.3:21037093-21037112 | None:intergenic | 45.0% | |
| AAACCATCAGAGAAAGACCC+AGG | - | chr4.3:21036903-21036922 | MS.gene068009:CDS | 45.0% | |
| AACCTCCCATTTCTCAACAG+CGG | - | chr4.3:21036014-21036033 | MS.gene068009:intron | 45.0% | |
| AAGACACTGAAGGATGCTCA+AGG | - | chr4.3:21036555-21036574 | MS.gene068009:intron | 45.0% | |
| AATGCTTGCAGAATTGGCAC+TGG | - | chr4.3:21037155-21037174 | MS.gene068009:intron | 45.0% | |
| AATTGGGCAGAAGAAATGGG+GGG | + | chr4.3:21039097-21039116 | None:intergenic | 45.0% | |
| ACGTGTTATGTTGAAGCTCC+AGG | - | chr4.3:21036348-21036367 | MS.gene068009:intron | 45.0% | |
| AGCACCATTTCCATACCTGT+TGG | + | chr4.3:21039620-21039639 | None:intergenic | 45.0% | |
| AGGGTTCCCAATCTTATTGG+GGG | - | chr4.3:21036066-21036085 | MS.gene068009:intron | 45.0% | |
| ATCCATACATCTCCGTCACA+AGG | + | chr4.3:21038305-21038324 | None:intergenic | 45.0% | |
| ATCCCAGCACAAACACCAAT+TGG | + | chr4.3:21036804-21036823 | None:intergenic | 45.0% | |
| ATGCCTCAGATCTCTGCTTT+CGG | - | chr4.3:21035991-21036010 | MS.gene068009:intron | 45.0% | |
| ATTGCCACAAGTAACAGCCA+CGG | + | chr4.3:21036871-21036890 | None:intergenic | 45.0% | |
| CCTGTCGGACACATAATCAA+AGG | + | chr4.3:21038935-21038954 | None:intergenic | 45.0% | |
| CCTTTGATTATGTGTCCGAC+AGG | - | chr4.3:21038932-21038951 | MS.gene068009:intron | 45.0% | |
| CGAACAAGGAAAGACACTGA+AGG | - | chr4.3:21036545-21036564 | MS.gene068009:intron | 45.0% | |
| CTAAACCATCTAGTGGGATG+AGG | - | chr4.3:21037085-21037104 | MS.gene068009:CDS | 45.0% | |
| GATAGAAAGCCAACATCACC+TGG | + | chr4.3:21036924-21036943 | None:intergenic | 45.0% | |
| GCTGGCGATCTCAATTTCTA+TGG | - | chr4.3:21039987-21040006 | MS.gene068009:CDS | 45.0% | |
| GGAAAACAAAGGCCTACTCA+AGG | + | chr4.3:21039038-21039057 | None:intergenic | 45.0% | |
| GGAAATCAGTCGAAGCAGAA+TGG | + | chr4.3:21038060-21038079 | None:intergenic | 45.0% | |
| GGAGATGTGTTTCGTGGTTT+AGG | - | chr4.3:21036576-21036595 | MS.gene068009:intron | 45.0% | |
| GGAGCTTATACGCAGAGATA+TGG | - | chr4.3:21036369-21036388 | MS.gene068009:intron | 45.0% | |
| GGAGCTTCAACATAACACGT+TGG | + | chr4.3:21036348-21036367 | None:intergenic | 45.0% | |
| GTGATCGATGATCGTGTATC+TGG | + | chr4.3:21035924-21035943 | None:intergenic | 45.0% | |
| GTGGAACATGCTTGTGGAAT+GGG | - | chr4.3:21036711-21036730 | MS.gene068009:intron | 45.0% | |
| GTTGCCCTGCACAAATATTG+TGG | + | chr4.3:21038415-21038434 | None:intergenic | 45.0% | |
| GTTTAAATACATTGGGGGGG+GGG | - | chr4.3:21040066-21040085 | MS.gene068009:intron | 45.0% | |
| TACCTTGTAGCACTCCATGT+CGG | + | chr4.3:21039218-21039237 | None:intergenic | 45.0% | |
| TAGGTCCCAGGATATGAATC+TGG | - | chr4.3:21039154-21039173 | MS.gene068009:intron | 45.0% | |
| TATCTCTGCGTATAAGCTCC+TGG | + | chr4.3:21036369-21036388 | None:intergenic | 45.0% | |
| TCGCAGCTTTCTATTCAACG+AGG | - | chr4.3:21035852-21035871 | MS.gene068009:CDS | 45.0% | |
| TCTTCCATCAAGCAGTAGTC+TGG | + | chr4.3:21038687-21038706 | None:intergenic | 45.0% | |
| TGCTGTATCTGCAGCTAAGA+AGG | - | chr4.3:21036285-21036304 | MS.gene068009:CDS | 45.0% | |
| TGGTCCAGTTATCAGCAAAC+AGG | - | chr4.3:21038498-21038517 | MS.gene068009:CDS | 45.0% | |
| TGGTGTGCAGTCTAATATGG+GGG | - | chr4.3:21037885-21037904 | MS.gene068009:intron | 45.0% | |
| TTCAGACTGAGATTGAGGCT+GGG | - | chr4.3:21039677-21039696 | MS.gene068009:intron | 45.0% | |
| TTCCCAATCTTATTGGGGGA+AGG | - | chr4.3:21036070-21036089 | MS.gene068009:intron | 45.0% | |
| TTGAGCCGCTGTTGAGAAAT+GGG | + | chr4.3:21036022-21036041 | None:intergenic | 45.0% | |
| TTTAAATACATTGGGGGGGG+GGG | - | chr4.3:21040067-21040086 | MS.gene068009:intron | 45.0% | |
| TTTCAGACTGAGATTGAGGC+TGG | - | chr4.3:21039676-21039695 | MS.gene068009:intron | 45.0% | |
| ! | ATCTAGTGGGATGAGGCTTT+TGG | - | chr4.3:21037092-21037111 | MS.gene068009:CDS | 45.0% |
| ! | CCCAGTTCTTCTTTTCATGG+AGG | - | chr4.3:21039362-21039381 | MS.gene068009:CDS | 45.0% |
| ! | GAACCAATTGGTGTTTGTGC+TGG | - | chr4.3:21036798-21036817 | MS.gene068009:intron | 45.0% |
| ! | TACCTTGTGACGGAGATGTA+TGG | - | chr4.3:21038300-21038319 | MS.gene068009:CDS | 45.0% |
| ! | TGGCCCAGTTCTTCTTTTCA+TGG | - | chr4.3:21039359-21039378 | MS.gene068009:intron | 45.0% |
| !! | CTAAGAAGGCATTTCCGTCA+TGG | - | chr4.3:21036299-21036318 | MS.gene068009:CDS | 45.0% |
| !!! | AGCACAGTTGTTTTTGTGGG+AGG | - | chr4.3:21038012-21038031 | MS.gene068009:intron | 45.0% |
| !!! | GCTTTAGTTGCTGCTGGTTT+TGG | - | chr4.3:21037961-21037980 | MS.gene068009:intron | 45.0% |
| !!! | TTTTTTTTTTTTTTATCTTT+TGG | - | chr4.3:21038343-21038362 | MS.gene068009:CDS | 5.0% |
| ACGGAACCTGATGCAGATCT+TGG | - | chr4.3:21038478-21038497 | MS.gene068009:intron | 50.0% | |
| ACTGGACCAAGATCTGCATC+AGG | + | chr4.3:21038487-21038506 | None:intergenic | 50.0% | |
| CAGCAGTGGAAGGATTCAGT+TGG | - | chr4.3:21040367-21040386 | MS.gene068009:intron | 50.0% | |
| CAGTGTCTTTCCTTGTTCGG+TGG | + | chr4.3:21036544-21036563 | None:intergenic | 50.0% | |
| CTCATTATGGATCCTGGACC+AGG | - | chr4.3:21039896-21039915 | MS.gene068009:CDS | 50.0% | |
| GAGAAAGACCCAGGTGATGT+TGG | - | chr4.3:21036912-21036931 | MS.gene068009:CDS | 50.0% | |
| GATGATCGTGTATCTGGGCT+GGG | + | chr4.3:21035918-21035937 | None:intergenic | 50.0% | |
| GCCCTGCACAAATATTGTGG+AGG | + | chr4.3:21038412-21038431 | None:intergenic | 50.0% | |
| GCTCAAGGAGATGTGTTTCG+TGG | - | chr4.3:21036570-21036589 | MS.gene068009:intron | 50.0% | |
| GGCTAGAACAGTCCTTGAGT+AGG | - | chr4.3:21039023-21039042 | MS.gene068009:intron | 50.0% | |
| GGTGGAACATGCTTGTGGAA+TGG | - | chr4.3:21036710-21036729 | MS.gene068009:intron | 50.0% | |
| GTGCATGACAAATAGGTCCC+AGG | - | chr4.3:21039142-21039161 | MS.gene068009:intron | 50.0% | |
| GTTCCGAAAGCAGAGATCTG+AGG | + | chr4.3:21035997-21036016 | None:intergenic | 50.0% | |
| GTTGAGCCGCTGTTGAGAAA+TGG | + | chr4.3:21036023-21036042 | None:intergenic | 50.0% | |
| TAGGAACGTTGATGCCAACC+TGG | + | chr4.3:21039917-21039936 | None:intergenic | 50.0% | |
| TCACCTGGGTCTTTCTCTGA+TGG | + | chr4.3:21036909-21036928 | None:intergenic | 50.0% | |
| TCCATTGTGGATGTTTCCCG+TGG | - | chr4.3:21036851-21036870 | MS.gene068009:intron | 50.0% | |
| TTAAATACATTGGGGGGGGG+GGG | - | chr4.3:21040068-21040087 | MS.gene068009:intron | 50.0% | |
| TTATGGATCCTGGACCAGGT+TGG | - | chr4.3:21039900-21039919 | MS.gene068009:CDS | 50.0% | |
| TTGCCACAAGTAACAGCCAC+GGG | + | chr4.3:21036870-21036889 | None:intergenic | 50.0% | |
| TTGTGGGAGGTTCACAAGCA+TGG | - | chr4.3:21038025-21038044 | MS.gene068009:intron | 50.0% | |
| ! | AAAGGGAAGCGTGTTCAGGT+AGG | - | chr4.3:21037787-21037806 | MS.gene068009:CDS | 50.0% |
| ! | ACTGGAGTGTTACGCCATGA+CGG | + | chr4.3:21036316-21036335 | None:intergenic | 50.0% |
| ! | AGCTAAAGGGAAGCGTGTTC+AGG | - | chr4.3:21037783-21037802 | MS.gene068009:CDS | 50.0% |
| ! | TTTCCCGTGGCTGTTACTTG+TGG | - | chr4.3:21036864-21036883 | MS.gene068009:intron | 50.0% |
| !! | CTACTTCTGGTGTTGCTGCT+AGG | - | chr4.3:21039650-21039669 | MS.gene068009:intron | 50.0% |
| !! | GCAAGCATTATAGAGGCACC+TGG | + | chr4.3:21037144-21037163 | None:intergenic | 50.0% |
| AGCCGCTGTTGAGAAATGGG+AGG | + | chr4.3:21036019-21036038 | None:intergenic | 55.0% | |
| CGATGATCGTGTATCTGGGC+TGG | + | chr4.3:21035919-21035938 | None:intergenic | 55.0% | |
| GCCACGGGAAACATCCACAA+TGG | + | chr4.3:21036855-21036874 | None:intergenic | 55.0% | |
| GGTGCCAGACTACTGCTTGA+TGG | - | chr4.3:21038680-21038699 | MS.gene068009:intron | 55.0% | |
| TAAATACATTGGGGGGGGGG+GGG | - | chr4.3:21040069-21040088 | MS.gene068009:intron | 55.0% | |
| ! | GCAGAATTGGCACTGGAAGC+TGG | - | chr4.3:21037162-21037181 | MS.gene068009:intron | 55.0% |
| ! | GGCAACAAGGCGTCATTTGC+TGG | - | chr4.3:21039969-21039988 | MS.gene068009:CDS | 55.0% |
| ! | GTTCAATCTGGGGTCGACAG+TGG | - | chr4.3:21038659-21038678 | MS.gene068009:intron | 55.0% |
| ! | TGCCGACATGGAGTGCTACA+AGG | - | chr4.3:21039213-21039232 | MS.gene068009:intron | 55.0% |
| !! | ACTGGAAGCTGGTTTGCCTG+AGG | - | chr4.3:21037173-21037192 | MS.gene068009:intron | 55.0% |
| !! | CTGGAAGCTGGTTTGCCTGA+GGG | - | chr4.3:21037174-21037193 | MS.gene068009:intron | 55.0% |
| !! | CTTACCGGCTTCACAGGCAA+AGG | - | chr4.3:21038619-21038638 | MS.gene068009:intron | 55.0% |
| !! | GAGGTGGTGGAACATGCTTG+TGG | - | chr4.3:21036705-21036724 | MS.gene068009:intron | 55.0% |
| !!! | CTGCTGGTTTTGGAGCTGCT+GGG | - | chr4.3:21037971-21037990 | MS.gene068009:intron | 55.0% |
| !!! | GTTTTGGAGCTGCTGGGCAA+AGG | - | chr4.3:21037977-21037996 | MS.gene068009:intron | 55.0% |
| AAATACATTGGGGGGGGGGG+GGG | - | chr4.3:21040070-21040089 | MS.gene068009:intron | 60.0% | |
| ACACGTTGGCGCGTCGTAAC+TGG | + | chr4.3:21036334-21036353 | None:intergenic | 60.0% | |
| CGCTCCTTTGCCTGTGAAGC+CGG | + | chr4.3:21038626-21038645 | None:intergenic | 60.0% | |
| CGTTGATGCCAACCTGGTCC+AGG | + | chr4.3:21039911-21039930 | None:intergenic | 60.0% | |
| GACTGAGATTGAGGCTGGGC+AGG | - | chr4.3:21039681-21039700 | MS.gene068009:intron | 60.0% | |
| ! | AGCTGCTGGGCAAAGGTGCA+TGG | - | chr4.3:21037984-21038003 | MS.gene068009:intron | 60.0% |
| !!! | GCTGCTGGTTTTGGAGCTGC+TGG | - | chr4.3:21037970-21037989 | MS.gene068009:intron | 60.0% |
| AATACATTGGGGGGGGGGGG+GGG | - | chr4.3:21040071-21040090 | MS.gene068009:intron | 65.0% | |
| ATACATTGGGGGGGGGGGGG+GGG | - | chr4.3:21040072-21040091 | MS.gene068009:intron | 70.0% | |
| TACATTGGGGGGGGGGGGGG+GGG | - | chr4.3:21040073-21040092 | MS.gene068009:intron | 75.0% | |
| ! | ACATTGGGGGGGGGGGGGGG+GGG | - | chr4.3:21040074-21040093 | MS.gene068009:intron | 80.0% |
| ! | ATTGGGGGGGGGGGGGGGGG+GGG | - | chr4.3:21040076-21040095 | MS.gene068009:intron | 85.0% |
| ! | CATTGGGGGGGGGGGGGGGG+GGG | - | chr4.3:21040075-21040094 | MS.gene068009:intron | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | - | chr4.3:21040077-21040096 | MS.gene068009:intron | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr4.3:21040078-21040097 | MS.gene068009:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 21035849 | 21040435 | 21035849 | ID=MS.gene068009 |
| chr4.3 | mRNA | 21035849 | 21040435 | 21035849 | ID=MS.gene068009.t1;Parent=MS.gene068009 |
| chr4.3 | exon | 21040411 | 21040435 | 21040411 | ID=MS.gene068009.t1.exon1;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21040411 | 21040435 | 21040411 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| chr4.3 | exon | 21040147 | 21040313 | 21040147 | ID=MS.gene068009.t1.exon2;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21040147 | 21040313 | 21040147 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| chr4.3 | exon | 21039894 | 21040055 | 21039894 | ID=MS.gene068009.t1.exon3;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21039894 | 21040055 | 21039894 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| chr4.3 | exon | 21039687 | 21039765 | 21039687 | ID=MS.gene068009.t1.exon4;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21039687 | 21039765 | 21039687 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| chr4.3 | exon | 21039360 | 21039578 | 21039360 | ID=MS.gene068009.t1.exon5;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21039360 | 21039578 | 21039360 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| chr4.3 | exon | 21039060 | 21039139 | 21039060 | ID=MS.gene068009.t1.exon6;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21039060 | 21039139 | 21039060 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| chr4.3 | exon | 21038765 | 21038830 | 21038765 | ID=MS.gene068009.t1.exon7;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21038765 | 21038830 | 21038765 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| chr4.3 | exon | 21038480 | 21038530 | 21038480 | ID=MS.gene068009.t1.exon8;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21038480 | 21038530 | 21038480 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| chr4.3 | exon | 21038238 | 21038389 | 21038238 | ID=MS.gene068009.t1.exon9;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21038238 | 21038389 | 21038238 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| chr4.3 | exon | 21037765 | 21037855 | 21037765 | ID=MS.gene068009.t1.exon10;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21037765 | 21037855 | 21037765 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| chr4.3 | exon | 21037569 | 21037649 | 21037569 | ID=MS.gene068009.t1.exon11;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21037569 | 21037649 | 21037569 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| chr4.3 | exon | 21037050 | 21037127 | 21037050 | ID=MS.gene068009.t1.exon12;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21037050 | 21037127 | 21037050 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| chr4.3 | exon | 21036901 | 21036936 | 21036901 | ID=MS.gene068009.t1.exon13;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21036901 | 21036936 | 21036901 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| chr4.3 | exon | 21036743 | 21036786 | 21036743 | ID=MS.gene068009.t1.exon14;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21036743 | 21036786 | 21036743 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| chr4.3 | exon | 21036582 | 21036660 | 21036582 | ID=MS.gene068009.t1.exon15;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21036582 | 21036660 | 21036582 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| chr4.3 | exon | 21036276 | 21036366 | 21036276 | ID=MS.gene068009.t1.exon16;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21036276 | 21036366 | 21036276 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| chr4.3 | exon | 21035849 | 21035961 | 21035849 | ID=MS.gene068009.t1.exon17;Parent=MS.gene068009.t1 |
| chr4.3 | CDS | 21035849 | 21035961 | 21035849 | ID=cds.MS.gene068009.t1;Parent=MS.gene068009.t1 |
| Gene Sequence |
| Protein sequence |