Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015742.t1 | XP_003629648.1 | 97 | 503 | 15 | 0 | 1 | 503 | 1 | 503 | 1.50E-279 | 971.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015742.t1 | Q56YU0 | 67.9 | 495 | 158 | 1 | 10 | 503 | 7 | 501 | 7.9e-200 | 698.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015742.t1 | G7L8Y6 | 97.0 | 503 | 15 | 0 | 1 | 503 | 1 | 503 | 1.1e-279 | 971.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015742.t1 | MTR_8g083530 | 97.018 | 503 | 15 | 0 | 1 | 503 | 1 | 503 | 0.0 | 1006 |
MS.gene015742.t1 | MTR_6g086300 | 79.200 | 500 | 104 | 0 | 4 | 503 | 3 | 502 | 0.0 | 816 |
MS.gene015742.t1 | MTR_6g086300 | 79.200 | 500 | 104 | 0 | 4 | 503 | 3 | 502 | 0.0 | 816 |
MS.gene015742.t1 | MTR_8g083520 | 78.395 | 486 | 72 | 1 | 18 | 503 | 9 | 461 | 0.0 | 786 |
MS.gene015742.t1 | MTR_6g086340 | 76.506 | 498 | 115 | 1 | 6 | 503 | 5 | 500 | 0.0 | 778 |
MS.gene015742.t1 | MTR_8g083530 | 97.110 | 346 | 10 | 0 | 1 | 346 | 1 | 346 | 0.0 | 693 |
MS.gene015742.t1 | MTR_8g083520 | 78.261 | 414 | 57 | 1 | 90 | 503 | 1 | 381 | 0.0 | 666 |
MS.gene015742.t1 | MTR_4g107040 | 54.021 | 485 | 223 | 0 | 19 | 503 | 60 | 544 | 0.0 | 563 |
MS.gene015742.t1 | MTR_3g078170 | 54.339 | 484 | 221 | 0 | 20 | 503 | 59 | 542 | 0.0 | 561 |
MS.gene015742.t1 | MTR_8g064170 | 54.132 | 484 | 222 | 0 | 20 | 503 | 58 | 541 | 0.0 | 560 |
MS.gene015742.t1 | MTR_8g064170 | 50.000 | 484 | 210 | 1 | 20 | 503 | 58 | 509 | 1.39e-177 | 509 |
MS.gene015742.t1 | MTR_3g078170 | 53.518 | 398 | 185 | 0 | 20 | 417 | 59 | 456 | 1.61e-156 | 453 |
MS.gene015742.t1 | MTR_3g078170 | 53.351 | 373 | 174 | 0 | 20 | 392 | 59 | 431 | 4.96e-144 | 421 |
MS.gene015742.t1 | MTR_3g078170 | 53.351 | 373 | 174 | 0 | 20 | 392 | 59 | 431 | 7.77e-144 | 421 |
MS.gene015742.t1 | MTR_4g106510 | 40.041 | 492 | 284 | 5 | 20 | 502 | 5 | 494 | 5.79e-112 | 341 |
MS.gene015742.t1 | MTR_3g078550 | 38.540 | 493 | 292 | 5 | 19 | 502 | 4 | 494 | 8.15e-110 | 335 |
MS.gene015742.t1 | MTR_3g078490 | 38.241 | 489 | 291 | 5 | 23 | 502 | 38 | 524 | 1.74e-108 | 333 |
MS.gene015742.t1 | MTR_3g078550 | 39.446 | 469 | 269 | 6 | 43 | 502 | 2 | 464 | 2.16e-105 | 323 |
MS.gene015742.t1 | MTR_2g067660 | 35.484 | 496 | 307 | 6 | 2 | 494 | 30 | 515 | 5.12e-99 | 308 |
MS.gene015742.t1 | MTR_1690s0010 | 40.870 | 345 | 199 | 4 | 23 | 365 | 9 | 350 | 1.34e-80 | 255 |
MS.gene015742.t1 | MTR_3g078490 | 36.578 | 339 | 206 | 4 | 20 | 351 | 5 | 341 | 3.12e-59 | 200 |
MS.gene015742.t1 | MTR_2g034160 | 28.964 | 473 | 316 | 9 | 36 | 494 | 62 | 528 | 1.26e-58 | 204 |
MS.gene015742.t1 | MTR_2g042330 | 29.545 | 484 | 322 | 13 | 26 | 500 | 25 | 498 | 4.61e-57 | 198 |
MS.gene015742.t1 | MTR_4g093170 | 31.393 | 481 | 306 | 11 | 26 | 493 | 45 | 514 | 9.58e-54 | 189 |
MS.gene015742.t1 | MTR_1g014320 | 27.642 | 492 | 322 | 9 | 26 | 499 | 19 | 494 | 1.91e-53 | 188 |
MS.gene015742.t1 | MTR_4g131180 | 27.423 | 485 | 322 | 8 | 24 | 494 | 17 | 485 | 3.07e-53 | 187 |
MS.gene015742.t1 | MTR_2g009750 | 31.185 | 481 | 307 | 11 | 26 | 493 | 18 | 487 | 6.10e-53 | 187 |
MS.gene015742.t1 | MTR_2g009750 | 31.042 | 480 | 308 | 11 | 26 | 493 | 18 | 486 | 3.65e-52 | 185 |
MS.gene015742.t1 | MTR_2g009750 | 31.042 | 480 | 308 | 11 | 26 | 493 | 17 | 485 | 3.97e-52 | 184 |
MS.gene015742.t1 | MTR_4g131180 | 27.293 | 458 | 303 | 8 | 24 | 467 | 17 | 458 | 8.96e-50 | 177 |
MS.gene015742.t1 | MTR_1399s0020 | 29.333 | 375 | 211 | 6 | 122 | 493 | 14 | 337 | 2.84e-38 | 143 |
MS.gene015742.t1 | MTR_1g029840 | 28.199 | 422 | 279 | 14 | 66 | 476 | 20 | 428 | 1.45e-29 | 121 |
MS.gene015742.t1 | MTR_8g076480 | 27.293 | 447 | 297 | 13 | 61 | 494 | 8 | 439 | 2.58e-29 | 120 |
MS.gene015742.t1 | MTR_1g029840 | 29.240 | 342 | 226 | 10 | 159 | 494 | 115 | 446 | 2.34e-28 | 118 |
MS.gene015742.t1 | MTR_8g094600 | 26.857 | 350 | 246 | 7 | 154 | 500 | 163 | 505 | 2.41e-28 | 118 |
MS.gene015742.t1 | MTR_2g097950 | 26.722 | 479 | 295 | 17 | 56 | 502 | 14 | 468 | 8.43e-27 | 114 |
MS.gene015742.t1 | MTR_3g088150 | 26.622 | 447 | 290 | 14 | 66 | 494 | 22 | 448 | 2.54e-26 | 112 |
MS.gene015742.t1 | MTR_1222s0010 | 28.852 | 357 | 226 | 10 | 92 | 437 | 33 | 372 | 5.00e-26 | 112 |
MS.gene015742.t1 | MTR_4g065040 | 29.260 | 311 | 201 | 10 | 154 | 456 | 99 | 398 | 6.17e-24 | 105 |
MS.gene015742.t1 | MTR_1314s0010 | 26.966 | 356 | 218 | 10 | 160 | 493 | 1 | 336 | 1.53e-21 | 96.3 |
MS.gene015742.t1 | MTR_2g097950 | 26.105 | 475 | 268 | 18 | 56 | 502 | 14 | 433 | 2.27e-21 | 97.4 |
MS.gene015742.t1 | MTR_0002s0820 | 43.023 | 86 | 42 | 1 | 222 | 300 | 58 | 143 | 3.76e-12 | 64.7 |
MS.gene015742.t1 | MTR_1g071870 | 65.854 | 41 | 14 | 0 | 445 | 485 | 227 | 267 | 1.90e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015742.t1 | AT3G24503 | 67.066 | 501 | 164 | 1 | 4 | 503 | 1 | 501 | 0.0 | 718 |
MS.gene015742.t1 | AT3G48000 | 54.752 | 484 | 219 | 0 | 20 | 503 | 55 | 538 | 0.0 | 563 |
MS.gene015742.t1 | AT1G23800 | 54.339 | 484 | 221 | 0 | 20 | 503 | 51 | 534 | 0.0 | 557 |
MS.gene015742.t1 | AT3G48170 | 40.365 | 493 | 283 | 5 | 19 | 502 | 4 | 494 | 4.44e-128 | 382 |
MS.gene015742.t1 | AT1G23800 | 52.299 | 348 | 154 | 3 | 20 | 359 | 51 | 394 | 5.37e-122 | 363 |
MS.gene015742.t1 | AT1G74920 | 39.192 | 495 | 287 | 6 | 17 | 502 | 5 | 494 | 8.15e-122 | 366 |
MS.gene015742.t1 | AT1G74920 | 39.394 | 495 | 281 | 7 | 17 | 502 | 5 | 489 | 5.87e-120 | 361 |
MS.gene015742.t1 | AT1G79440 | 37.234 | 470 | 290 | 4 | 26 | 494 | 56 | 521 | 5.77e-98 | 306 |
MS.gene015742.t1 | AT2G14170 | 32.848 | 481 | 299 | 11 | 26 | 493 | 8 | 477 | 2.37e-60 | 206 |
MS.gene015742.t1 | AT2G14170 | 32.604 | 503 | 311 | 13 | 6 | 494 | 99 | 587 | 6.83e-60 | 207 |
MS.gene015742.t1 | AT2G14170 | 33.917 | 457 | 287 | 9 | 6 | 456 | 99 | 546 | 1.91e-59 | 206 |
MS.gene015742.t1 | AT3G66658 | 29.175 | 473 | 315 | 9 | 36 | 494 | 62 | 528 | 5.36e-57 | 199 |
MS.gene015742.t1 | AT3G66658 | 29.175 | 473 | 315 | 9 | 36 | 494 | 62 | 528 | 7.82e-57 | 199 |
MS.gene015742.t1 | AT1G54100 | 29.079 | 478 | 310 | 14 | 36 | 498 | 32 | 495 | 2.43e-55 | 193 |
MS.gene015742.t1 | AT1G54100 | 29.079 | 478 | 310 | 14 | 36 | 498 | 32 | 495 | 2.43e-55 | 193 |
MS.gene015742.t1 | AT2G24270 | 28.827 | 503 | 306 | 12 | 24 | 499 | 17 | 494 | 2.82e-55 | 193 |
MS.gene015742.t1 | AT2G24270 | 28.827 | 503 | 306 | 12 | 24 | 499 | 17 | 494 | 2.82e-55 | 193 |
MS.gene015742.t1 | AT2G24270 | 28.827 | 503 | 306 | 12 | 24 | 499 | 17 | 494 | 3.29e-55 | 193 |
MS.gene015742.t1 | AT2G24270 | 28.827 | 503 | 306 | 12 | 24 | 499 | 57 | 534 | 7.95e-55 | 192 |
MS.gene015742.t1 | AT1G44170 | 27.358 | 424 | 280 | 13 | 66 | 476 | 16 | 424 | 6.13e-29 | 119 |
MS.gene015742.t1 | AT1G44170 | 27.358 | 424 | 280 | 13 | 66 | 476 | 16 | 424 | 6.13e-29 | 119 |
MS.gene015742.t1 | AT1G44170 | 29.814 | 322 | 214 | 9 | 159 | 476 | 48 | 361 | 9.43e-29 | 118 |
MS.gene015742.t1 | AT4G36250 | 25.607 | 453 | 310 | 14 | 56 | 494 | 2 | 441 | 1.33e-25 | 110 |
MS.gene015742.t1 | AT4G34240 | 29.179 | 329 | 217 | 9 | 154 | 476 | 27 | 345 | 3.83e-22 | 99.0 |
MS.gene015742.t1 | AT4G34240 | 29.518 | 332 | 212 | 11 | 154 | 476 | 169 | 487 | 1.10e-21 | 98.6 |
MS.gene015742.t1 | AT4G34240 | 29.518 | 332 | 212 | 11 | 154 | 476 | 154 | 472 | 1.12e-21 | 98.6 |
Find 126 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATCTTCAGGTCAGCTTTAC+AGG | 0.144622 | 4.3:-2046388 | MS.gene015742:intron |
AGCTGTTGACCTTGCTCTTT+TGG | 0.204757 | 4.3:-2046245 | MS.gene015742:CDS |
CCATCCGTGCAGGCGTTATT+TGG | 0.211828 | 4.3:-2045071 | MS.gene015742:CDS |
AAACATGTTTCACTTGAATT+AGG | 0.221275 | 4.3:-2046313 | MS.gene015742:CDS |
GCAATCACATCTCCTGTTCT+TGG | 0.224759 | 4.3:+2048193 | None:intergenic |
GGTATTGTTGGCACTCTTAA+TGG | 0.226974 | 4.3:+2045158 | None:intergenic |
ATAGCACAGGATGAAATATT+TGG | 0.239702 | 4.3:-2045318 | MS.gene015742:CDS |
CAAAATGAACCTTGTTAGTT+AGG | 0.270203 | 4.3:+2046218 | None:intergenic |
GTTTGCAATATCCAAGTTCT+TGG | 0.295408 | 4.3:+2045107 | None:intergenic |
GCACGTGAAGCATTTGATTC+AGG | 0.298318 | 4.3:-2048121 | MS.gene015742:CDS |
GGAGCTGTTGTCCCCATTAC+TGG | 0.309311 | 4.3:+2050318 | None:intergenic |
GGATATAAAATGAGTGGATT+TGG | 0.311802 | 4.3:-2045006 | MS.gene015742:CDS |
TGGGAAAATAATGATGAAAT+TGG | 0.313991 | 4.3:-2047977 | MS.gene015742:CDS |
TCTCTTTCCATGCTCAATAT+AGG | 0.329646 | 4.3:+2045552 | None:intergenic |
GCCTGCTGCTAGGCCATATC+TGG | 0.333975 | 4.3:+2045137 | None:intergenic |
TGGATAAACTCTTATCTTGC+CGG | 0.334055 | 4.3:-2045051 | MS.gene015742:CDS |
GAAAGAGGTGTTTGTTCAGC+AGG | 0.348135 | 4.3:+2047652 | None:intergenic |
CTGATCTTAACTCCAGTAAT+GGG | 0.351808 | 4.3:-2050330 | MS.gene015742:CDS |
ACCAGCAGTTGGACCAAATC+CGG | 0.357395 | 4.3:+2047496 | None:intergenic |
GGTCCATGGCCCCGGATGTC+TGG | 0.361847 | 4.3:-2048100 | MS.gene015742:CDS |
TGCATACCAGCTTAGCTAGA+TGG | 0.364778 | 4.3:+2047614 | None:intergenic |
GAGTGGATTTGGAAGAGATC+TGG | 0.366600 | 4.3:-2044995 | MS.gene015742:CDS |
GGTCAGGTATTAAAATCTTC+TGG | 0.368777 | 4.3:-2047808 | MS.gene015742:CDS |
CTGCAGCTTGCATTATTTCA+CGG | 0.378514 | 4.3:+2046350 | None:intergenic |
CAATCACATCTCCTGTTCTT+GGG | 0.382551 | 4.3:+2048194 | None:intergenic |
TTTACATTGGAGAAAATTGT+AGG | 0.393711 | 4.3:+2045469 | None:intergenic |
AAGGCAAAAGCCTGGGTCAT+TGG | 0.394324 | 4.3:-2046028 | MS.gene015742:CDS |
ACTACATTCAGCACTCCATT+TGG | 0.395039 | 4.3:+2047521 | None:intergenic |
CTACATTCAGCACTCCATTT+GGG | 0.409277 | 4.3:+2047522 | None:intergenic |
GAAGAGCTTGTTATACTTGA+TGG | 0.409539 | 4.3:+2050279 | None:intergenic |
AGCCAGGGAGAATTGTAAAT+AGG | 0.410531 | 4.3:+2044925 | None:intergenic |
AGTGGATTTGGAAGAGATCT+GGG | 0.423011 | 4.3:-2044994 | MS.gene015742:CDS |
AGGTAGAAGAGTGGGCAGTC+AGG | 0.426583 | 4.3:-2045506 | MS.gene015742:CDS |
GTCAGCCCTTCCTTAGCTGC+TGG | 0.426729 | 4.3:-2047694 | MS.gene015742:CDS |
AGTGCCAACAATACCAGATA+TGG | 0.435908 | 4.3:-2045150 | MS.gene015742:CDS |
CCAAATAACGCCTGCACGGA+TGG | 0.438781 | 4.3:+2045071 | None:intergenic |
CTGAATGTAGTACCCGGATT+TGG | 0.439245 | 4.3:-2047509 | MS.gene015742:CDS |
AACATACAACACCAGACATC+CGG | 0.439678 | 4.3:+2048089 | None:intergenic |
TAGGCCATATCTGGTATTGT+TGG | 0.452905 | 4.3:+2045146 | None:intergenic |
TGCTGATAAAATTCATGGTC+AGG | 0.454958 | 4.3:-2047824 | MS.gene015742:CDS |
TATAACAAGCTCTTCATCAA+TGG | 0.465405 | 4.3:-2050271 | MS.gene015742:CDS |
TTATGCCCATCTAGCTAAGC+TGG | 0.465946 | 4.3:-2047620 | MS.gene015742:intron |
CCCGTGTGTTTGTTCAGGAA+GGG | 0.470418 | 4.3:-2046084 | MS.gene015742:CDS |
CATGTTTCACTTGAATTAGG+AGG | 0.477018 | 4.3:-2046310 | MS.gene015742:CDS |
AACTTCATTAGTGCCATCAC+AGG | 0.478671 | 4.3:+2045294 | None:intergenic |
ATCATTTCCTATATTGAGCA+TGG | 0.479023 | 4.3:-2045559 | MS.gene015742:CDS |
GGATAAACTCTTATCTTGCC+GGG | 0.487897 | 4.3:-2045050 | MS.gene015742:CDS |
ACCAGATATGGCCTAGCAGC+AGG | 0.488058 | 4.3:-2045138 | MS.gene015742:CDS |
GAAGGAGCTACACTCTTGAC+TGG | 0.489006 | 4.3:-2045529 | MS.gene015742:CDS |
CCCGGATTTGGTCCAACTGC+TGG | 0.491887 | 4.3:-2047497 | MS.gene015742:CDS |
TTGATTCAGGTCCATGGCCC+CGG | 0.492114 | 4.3:-2048108 | MS.gene015742:CDS |
ATATTGCAAACACTGTTTCA+AGG | 0.493347 | 4.3:-2045095 | MS.gene015742:CDS |
CATGGTGCACCCAGCAGCTA+AGG | 0.495373 | 4.3:+2047684 | None:intergenic |
TTTACAGGTTCAGTTGAAGT+AGG | 0.496624 | 4.3:-2046373 | MS.gene015742:CDS |
CTAAAGGCTGGAATCCCAAA+TGG | 0.497301 | 4.3:-2047536 | MS.gene015742:intron |
TAAAACTCAGCAAGGACCTC+AGG | 0.497381 | 4.3:-2045990 | MS.gene015742:intron |
TCCCGTGTGTTTGTTCAGGA+AGG | 0.497846 | 4.3:-2046085 | MS.gene015742:CDS |
ACTGATCTTAACTCCAGTAA+TGG | 0.498657 | 4.3:-2050331 | MS.gene015742:CDS |
ATGTTCCCGTGTGTTTGTTC+AGG | 0.499306 | 4.3:-2046089 | MS.gene015742:CDS |
TCAGCCCTTCCTTAGCTGCT+GGG | 0.499600 | 4.3:-2047693 | MS.gene015742:CDS |
ATGTGTCCCACAACACCAAT+TGG | 0.499649 | 4.3:+2047757 | None:intergenic |
AGGCATTGTGACCAAGAACT+TGG | 0.500232 | 4.3:-2045118 | MS.gene015742:CDS |
ATAATTGATTACCTTTACAT+TGG | 0.501299 | 4.3:+2045456 | None:intergenic |
TGGTCACAATGCCTGCTGCT+AGG | 0.501477 | 4.3:+2045127 | None:intergenic |
TCAGTGTGTATGCATGGAAT+TGG | 0.503568 | 4.3:+2047785 | None:intergenic |
GGTAGAAGAGTGGGCAGTCA+GGG | 0.509367 | 4.3:-2045505 | MS.gene015742:CDS |
GAAACAATAGACCCAAGAAC+AGG | 0.512084 | 4.3:-2048205 | MS.gene015742:CDS |
GGAGGACATGCTTATAGCAC+AGG | 0.517349 | 4.3:-2045331 | MS.gene015742:CDS |
GCATACCAGCTTAGCTAGAT+GGG | 0.518386 | 4.3:+2047615 | None:intergenic |
CGTAGGAGACATTCAAAGCC+AGG | 0.518540 | 4.3:+2044909 | None:intergenic |
ATTGTAAATAGGTGTTACAA+TGG | 0.527726 | 4.3:+2044936 | None:intergenic |
ATGGAACCAATTGGTGTTGT+GGG | 0.528798 | 4.3:-2047763 | MS.gene015742:CDS |
ACATACAACACCAGACATCC+GGG | 0.529052 | 4.3:+2048090 | None:intergenic |
AAAAGGAATGTCACTTCCCC+CGG | 0.532323 | 4.3:+2045032 | None:intergenic |
GTTTCAAGGTCCATCCGTGC+AGG | 0.533004 | 4.3:-2045081 | MS.gene015742:CDS |
CACCTATTTACAATTCTCCC+TGG | 0.535841 | 4.3:-2044927 | MS.gene015742:CDS |
ACACCAGACATCCGGGGCCA+TGG | 0.536998 | 4.3:+2048097 | None:intergenic |
ATTGAAGTGGGAGCATTCCA+TGG | 0.540068 | 4.3:+2047730 | None:intergenic |
ACATTAGATGCAATTGATGC+TGG | 0.541154 | 4.3:-2047919 | MS.gene015742:CDS |
GTGCACCCAGCAGCTAAGGA+AGG | 0.541901 | 4.3:+2047688 | None:intergenic |
TTTGGAGGATATAAAATGAG+TGG | 0.544876 | 4.3:-2045012 | MS.gene015742:CDS |
CTTAGCTGCTGGGTGCACCA+TGG | 0.547442 | 4.3:-2047683 | MS.gene015742:CDS |
GGTGCTGCTGATAAAATTCA+TGG | 0.547810 | 4.3:-2047829 | MS.gene015742:CDS |
TGCTGCAATCAGCTCACACA+TGG | 0.551069 | 4.3:-2047474 | MS.gene015742:CDS |
AATACACTACGTTACTATGC+AGG | 0.552179 | 4.3:-2047850 | MS.gene015742:CDS |
AAGCATTTGATTCAGGTCCA+TGG | 0.553105 | 4.3:-2048114 | MS.gene015742:CDS |
TGGTGGAGAAGGCAAAAGCC+TGG | 0.554570 | 4.3:-2046036 | MS.gene015742:CDS |
TTTGTGAAGAAAATTGAAGT+GGG | 0.565585 | 4.3:+2047718 | None:intergenic |
CGTAGTGTATTTGCTGCTGA+AGG | 0.570626 | 4.3:+2047862 | None:intergenic |
ATTCCATGCATACACACTGA+TGG | 0.571107 | 4.3:-2047782 | MS.gene015742:CDS |
TGAAATATTTGGCCCTGTGA+TGG | 0.571430 | 4.3:-2045307 | MS.gene015742:CDS |
CCAGCAGTTGGACCAAATCC+GGG | 0.571816 | 4.3:+2047497 | None:intergenic |
CTGATTGCAGCACCAGCAGT+TGG | 0.572903 | 4.3:+2047485 | None:intergenic |
TACACACTGATGGAACCAAT+TGG | 0.580643 | 4.3:-2047772 | MS.gene015742:CDS |
AGCTTGTTATACTTGATGGT+CGG | 0.581979 | 4.3:+2050283 | None:intergenic |
TTCAGCAGGTTTGAGAACCA+TGG | 0.586358 | 4.3:+2047666 | None:intergenic |
TTGTGGGACACATCATTCCA+TGG | 0.586369 | 4.3:-2047747 | MS.gene015742:CDS |
GATGGAACCAATTGGTGTTG+TGG | 0.586951 | 4.3:-2047764 | MS.gene015742:CDS |
GCATAAAACAAAGCAGAAAG+AGG | 0.589025 | 4.3:+2047637 | None:intergenic |
ATTGAGCATGGAAAGAGAGA+AGG | 0.590273 | 4.3:-2045547 | MS.gene015742:CDS |
TGCACCCAGCAGCTAAGGAA+GGG | 0.590276 | 4.3:+2047689 | None:intergenic |
TTGACTGGAGGTAGAAGAGT+GGG | 0.591266 | 4.3:-2045514 | MS.gene015742:CDS |
GGTGGAGAAGGCAAAAGCCT+GGG | 0.597440 | 4.3:-2046035 | MS.gene015742:CDS |
TTTGGGTATCCTAACTAACA+AGG | 0.599837 | 4.3:-2046227 | MS.gene015742:intron |
GTTCCATCAGTGTGTATGCA+TGG | 0.603984 | 4.3:+2047779 | None:intergenic |
ATATTAAATATCAGGAACGT+GGG | 0.604582 | 4.3:-2047996 | MS.gene015742:intron |
GATAAACTCTTATCTTGCCG+GGG | 0.605189 | 4.3:-2045049 | MS.gene015742:CDS |
AAAAGGATCTCCAATGACCC+AGG | 0.631836 | 4.3:+2046018 | None:intergenic |
GTGATTGCAAGAATAAGTGA+AGG | 0.636689 | 4.3:-2048178 | MS.gene015742:CDS |
TTTGATCCTAAAACTCAGCA+AGG | 0.637108 | 4.3:-2045998 | MS.gene015742:CDS |
TTATCCAAATAACGCCTGCA+CGG | 0.637223 | 4.3:+2045067 | None:intergenic |
ACTTCATTAGTGCCATCACA+GGG | 0.638597 | 4.3:+2045295 | None:intergenic |
TCCCTTCCTGAACAAACACA+CGG | 0.639935 | 4.3:+2046083 | None:intergenic |
AGATGCAATTGATGCTGGCA+AGG | 0.641641 | 4.3:-2047914 | MS.gene015742:CDS |
TTAGGATACCCAAAAGAGCA+AGG | 0.644369 | 4.3:+2046236 | None:intergenic |
GATATTAAATATCAGGAACG+TGG | 0.658049 | 4.3:-2047997 | MS.gene015742:intron |
CTTGACTGGAGGTAGAAGAG+TGG | 0.659877 | 4.3:-2045515 | MS.gene015742:CDS |
ATAAACTCTTATCTTGCCGG+GGG | 0.661062 | 4.3:-2045048 | MS.gene015742:CDS |
GTAGGAGACATTCAAAGCCA+GGG | 0.664341 | 4.3:+2044910 | None:intergenic |
TGATCTTAACTCCAGTAATG+GGG | 0.665539 | 4.3:-2050329 | MS.gene015742:CDS |
CCCTTCCTGAACAAACACAC+GGG | 0.676755 | 4.3:+2046084 | None:intergenic |
GGAGTGCTGAATGTAGTACC+CGG | 0.683406 | 4.3:-2047515 | MS.gene015742:CDS |
GCATCATCGAAAATTATGAG+AGG | 0.689690 | 4.3:+2046280 | None:intergenic |
CTCACACATGGACATAGATG+TGG | 0.692327 | 4.3:-2047462 | MS.gene015742:intron |
GGAGCTACACTCTTGACTGG+AGG | 0.701852 | 4.3:-2045526 | MS.gene015742:CDS |
CATACAACACCAGACATCCG+GGG | 0.727771 | 4.3:+2048091 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACAAAATTAACTTAAAAATA+GGG | + | chr4.3:2048209-2048228 | None:intergenic | 10.0% |
!! | TACAAAATTAACTTAAAAAT+AGG | + | chr4.3:2048210-2048229 | None:intergenic | 10.0% |
!!! | AAAAATGTTAAATATGTTTT+TGG | + | chr4.3:2048493-2048512 | None:intergenic | 10.0% |
!!! | AATAATAAGAATAATTTTTC+GGG | - | chr4.3:2045695-2045714 | MS.gene015742:intron | 10.0% |
!!! | AATTATATTTGTATCAATTT+TGG | - | chr4.3:2049816-2049835 | MS.gene015742:intron | 10.0% |
!!! | ACAATATAGTTTTTTTTTTT+TGG | - | chr4.3:2048582-2048601 | MS.gene015742:intron | 10.0% |
!!! | AGCTATTTTTAAATTATATT+TGG | - | chr4.3:2048781-2048800 | MS.gene015742:intron | 10.0% |
!!! | ATTATATTTGTATCAATTTT+GGG | - | chr4.3:2049817-2049836 | MS.gene015742:intron | 10.0% |
!!! | TATTAATTTATGATTTTCTT+GGG | + | chr4.3:2045743-2045762 | None:intergenic | 10.0% |
!!! | TTATTAATTTATGATTTTCT+TGG | + | chr4.3:2045744-2045763 | None:intergenic | 10.0% |
!!! | TTTTTTTTAATGAAGAAAAA+GGG | + | chr4.3:2046936-2046955 | None:intergenic | 10.0% |
!!! | TTTTTTTTTAATGAAGAAAA+AGG | + | chr4.3:2046937-2046956 | None:intergenic | 10.0% |
!! | AAGGATAAGAATAAAAAATA+CGG | + | chr4.3:2045501-2045520 | None:intergenic | 15.0% |
!! | AATCTGAAAAATAATTACTA+AGG | - | chr4.3:2048652-2048671 | MS.gene015742:intron | 15.0% |
!! | CATTAATTTAGATTATTAGA+AGG | + | chr4.3:2047231-2047250 | None:intergenic | 15.0% |
!! | TCAAATCTAATATTTAATCA+CGG | - | chr4.3:2045276-2045295 | MS.gene015742:intron | 15.0% |
!! | TCTAAATTAATAAATTTCTC+CGG | - | chr4.3:2046061-2046080 | MS.gene015742:CDS | 15.0% |
!!! | AAAAAATTGGTCTTTTTATA+AGG | + | chr4.3:2048116-2048135 | None:intergenic | 15.0% |
!!! | AAATGATTTTTGTTTTTCAA+CGG | + | chr4.3:2047865-2047884 | None:intergenic | 15.0% |
!!! | CACGAATTTAATATTTTTTA+CGG | + | chr4.3:2048290-2048309 | None:intergenic | 15.0% |
!!! | TAACATTGATAATTATTATG+TGG | - | chr4.3:2046998-2047017 | MS.gene015742:intron | 15.0% |
!!! | TCTAAAATAATAAATTTGTC+CGG | - | chr4.3:2045631-2045650 | MS.gene015742:intron | 15.0% |
!! | AAACATAAAAACAAAGAACT+TGG | + | chr4.3:2046892-2046911 | None:intergenic | 20.0% |
!! | AAATATTACATGACAGTTAT+GGG | + | chr4.3:2045151-2045170 | None:intergenic | 20.0% |
!! | AACATAAAAACAAAGAACTT+GGG | + | chr4.3:2046891-2046910 | None:intergenic | 20.0% |
!! | AATCTCCAAAAAATTATGTA+AGG | + | chr4.3:2045371-2045390 | None:intergenic | 20.0% |
!! | ACAATAATTATGTTTGGATT+TGG | + | chr4.3:2046181-2046200 | None:intergenic | 20.0% |
!! | ATAATTGATTACCTTTACAT+TGG | + | chr4.3:2049802-2049821 | None:intergenic | 20.0% |
!! | ATGAAGTTATTCATAATTCT+TGG | - | chr4.3:2048619-2048638 | MS.gene015742:intron | 20.0% |
!! | CTCTATAAATTAATAATGTC+AGG | + | chr4.3:2046088-2046107 | None:intergenic | 20.0% |
!! | TAAATATTACATGACAGTTA+TGG | + | chr4.3:2045152-2045171 | None:intergenic | 20.0% |
!! | TTGAATTGAATAACCTATTT+AGG | - | chr4.3:2049903-2049922 | MS.gene015742:intron | 20.0% |
!! | TTTAATTGACATACCATTTA+GGG | - | chr4.3:2050011-2050030 | MS.gene015742:intron | 20.0% |
!!! | AAACGCTTTAAATTAATACT+CGG | - | chr4.3:2045593-2045612 | MS.gene015742:intron | 20.0% |
!!! | AAGTTGAAAGAAAATTTTAG+AGG | + | chr4.3:2048148-2048167 | None:intergenic | 20.0% |
!!! | AATTATTATGTGGCTTTTTA+TGG | - | chr4.3:2047008-2047027 | MS.gene015742:intron | 20.0% |
!!! | AGTTGAAAGAAAATTTTAGA+GGG | + | chr4.3:2048147-2048166 | None:intergenic | 20.0% |
!!! | ATGAGTTGATATTAAATATC+AGG | - | chr4.3:2047251-2047270 | MS.gene015742:intron | 20.0% |
!!! | CATCTCAAATGATTTTATAA+TGG | - | chr4.3:2048056-2048075 | MS.gene015742:intron | 20.0% |
!!! | GATAATAGTTAACTTTGTTT+CGG | - | chr4.3:2045547-2045566 | MS.gene015742:CDS | 20.0% |
!!! | TAATGGCTTGATTTTATAAT+AGG | - | chr4.3:2048073-2048092 | MS.gene015742:intron | 20.0% |
!!! | TTAATTGAGAATTCTAGTTT+TGG | - | chr4.3:2046630-2046649 | MS.gene015742:intron | 20.0% |
!!! | TTTTAATGTTTGTGTTCTAA+AGG | - | chr4.3:2047703-2047722 | MS.gene015742:CDS | 20.0% |
!!! | TTTTAATTGACATACCATTT+AGG | - | chr4.3:2050010-2050029 | MS.gene015742:intron | 20.0% |
!!! | TTTTCAATCACTACTTTTTT+TGG | - | chr4.3:2048182-2048201 | MS.gene015742:CDS | 20.0% |
! | AAACATGTTTCACTTGAATT+AGG | - | chr4.3:2048942-2048961 | MS.gene015742:intron | 25.0% |
! | AACAAAAATCATTTGACCAA+CGG | - | chr4.3:2047871-2047890 | MS.gene015742:CDS | 25.0% |
! | AAGTGTCTTAAGTCAATAAA+AGG | + | chr4.3:2046124-2046143 | None:intergenic | 25.0% |
! | AATAATTACTAAGGAACAAG+AGG | - | chr4.3:2048661-2048680 | MS.gene015742:intron | 25.0% |
! | AATGTATTCTTAAGCAAGTT+TGG | + | chr4.3:2045814-2045833 | None:intergenic | 25.0% |
! | AATTGAATAACCTATTTAGG+AGG | - | chr4.3:2049906-2049925 | MS.gene015742:intron | 25.0% |
! | ACATAAAAACAAAGAACTTG+GGG | + | chr4.3:2046890-2046909 | None:intergenic | 25.0% |
! | ACTGTACATACAAAACAAAA+AGG | + | chr4.3:2045981-2046000 | None:intergenic | 25.0% |
! | AGAGTACGTAGAAATAAAAA+AGG | + | chr4.3:2045054-2045073 | None:intergenic | 25.0% |
! | ATATTAAATATCAGGAACGT+GGG | - | chr4.3:2047259-2047278 | MS.gene015742:intron | 25.0% |
! | ATCTGGTCTATGAAAATTAA+AGG | + | chr4.3:2047680-2047699 | None:intergenic | 25.0% |
! | CAAGCTTAGAAATCAAATAT+TGG | + | chr4.3:2049117-2049136 | None:intergenic | 25.0% |
! | CACAAACATTAAAATCTATC+TGG | + | chr4.3:2047697-2047716 | None:intergenic | 25.0% |
! | CCAAAAAATTATGTAAGGTA+AGG | + | chr4.3:2045366-2045385 | None:intergenic | 25.0% |
! | GAGGGATTAAAACAAAAAAT+TGG | + | chr4.3:2048129-2048148 | None:intergenic | 25.0% |
! | GTAGTGATTGAAAATTCTAT+AGG | + | chr4.3:2048176-2048195 | None:intergenic | 25.0% |
! | TAAAAGGAAAGAAAACATGA+TGG | + | chr4.3:2049869-2049888 | None:intergenic | 25.0% |
! | TAAATTAATAATGTCAGGAC+CGG | + | chr4.3:2046083-2046102 | None:intergenic | 25.0% |
! | TATGAATTTAGCATGTGTAT+TGG | + | chr4.3:2045100-2045119 | None:intergenic | 25.0% |
! | TCATTAGTTGATTACAAACT+TGG | + | chr4.3:2048818-2048837 | None:intergenic | 25.0% |
! | TGAAGATGGAAAATATTTGA+AGG | - | chr4.3:2048428-2048447 | MS.gene015742:intron | 25.0% |
! | TGGGAAAATAATGATGAAAT+TGG | - | chr4.3:2047278-2047297 | MS.gene015742:intron | 25.0% |
! | TTAATTGACATACCATTTAG+GGG | - | chr4.3:2050012-2050031 | MS.gene015742:intron | 25.0% |
! | TTAGTAACTACTATGTTCAT+AGG | + | chr4.3:2045900-2045919 | None:intergenic | 25.0% |
! | TTGTCTATAACGACTTATTA+AGG | - | chr4.3:2046687-2046706 | MS.gene015742:intron | 25.0% |
! | TTTACATTGGAGAAAATTGT+AGG | + | chr4.3:2049789-2049808 | None:intergenic | 25.0% |
! | TTTGTGAAGAAAATTGAAGT+GGG | + | chr4.3:2047540-2047559 | None:intergenic | 25.0% |
!! | AACGTTTTTGATGAGATAAA+AGG | + | chr4.3:2049885-2049904 | None:intergenic | 25.0% |
!! | ATTGTAAATAGGTGTTACAA+TGG | + | chr4.3:2050322-2050341 | None:intergenic | 25.0% |
!! | CAAATTTGTTTGGTTATATG+AGG | - | chr4.3:2046206-2046225 | MS.gene015742:intron | 25.0% |
!! | CTTTGTAAGGAAAAGATTTT+CGG | + | chr4.3:2049067-2049086 | None:intergenic | 25.0% |
!! | TACAATTTTCTCCAATGTAA+AGG | - | chr4.3:2049788-2049807 | MS.gene015742:intron | 25.0% |
!! | TTTATGTTTTCCTCTATGTT+AGG | - | chr4.3:2046903-2046922 | MS.gene015742:intron | 25.0% |
!! | TTTTGTGAAGAAAATTGAAG+TGG | + | chr4.3:2047541-2047560 | None:intergenic | 25.0% |
!!! | AAATTAAAGGTACTGATCTA+AGG | + | chr4.3:2047667-2047686 | None:intergenic | 25.0% |
!!! | AGGAAATGATTTTTTCGAAT+TGG | + | chr4.3:2049686-2049705 | None:intergenic | 25.0% |
!!! | ATGGTGGATTAATTTAAGTA+TGG | - | chr4.3:2050046-2050065 | MS.gene015742:intron | 25.0% |
!!! | ATTTTGGGTATCTTTATCAT+AGG | - | chr4.3:2049832-2049851 | MS.gene015742:intron | 25.0% |
!!! | CCTTACCTTACATAATTTTT+TGG | - | chr4.3:2045363-2045382 | MS.gene015742:intron | 25.0% |
!!! | TAAAAGAGTTACTTGCTTTT+CGG | + | chr4.3:2046528-2046547 | None:intergenic | 25.0% |
!!! | TGGTGGATTAATTTAAGTAT+GGG | - | chr4.3:2050047-2050066 | MS.gene015742:intron | 25.0% |
AACCAATGTTCAATACAAGA+AGG | + | chr4.3:2045520-2045539 | None:intergenic | 30.0% | |
ACATGAGTTTACTTCAAAAG+AGG | - | chr4.3:2048396-2048415 | MS.gene015742:intron | 30.0% | |
ACCTGAAGATACAAAATCAA+AGG | + | chr4.3:2048858-2048877 | None:intergenic | 30.0% | |
AGAAGTTCACAATTAGACTT+CGG | - | chr4.3:2048727-2048746 | MS.gene015742:intron | 30.0% | |
AGGAAAAAGAAAAGAAAAGC+AGG | - | chr4.3:2046226-2046245 | MS.gene015742:intron | 30.0% | |
ATAGCACAGGATGAAATATT+TGG | - | chr4.3:2049937-2049956 | MS.gene015742:intron | 30.0% | |
ATATTGCAAACACTGTTTCA+AGG | - | chr4.3:2050160-2050179 | MS.gene015742:intron | 30.0% | |
ATCATTTCCTATATTGAGCA+TGG | - | chr4.3:2049696-2049715 | MS.gene015742:intron | 30.0% | |
ATCCTTCTTGTATTGAACAT+TGG | - | chr4.3:2045515-2045534 | MS.gene015742:CDS | 30.0% | |
ATGCAAGACATTCACAAAAA+TGG | - | chr4.3:2049419-2049438 | MS.gene015742:intron | 30.0% | |
ATTTGTGAACTAAGAAAGTG+AGG | + | chr4.3:2049541-2049560 | None:intergenic | 30.0% | |
CAAAATGAACCTTGTTAGTT+AGG | + | chr4.3:2049040-2049059 | None:intergenic | 30.0% | |
CAGGTAAGGTCAATATATAA+TGG | - | chr4.3:2049284-2049303 | MS.gene015742:intron | 30.0% | |
CATGAGTTTACTTCAAAAGA+GGG | - | chr4.3:2048397-2048416 | MS.gene015742:intron | 30.0% | |
CCTGAAGATACAAAATCAAA+GGG | + | chr4.3:2048857-2048876 | None:intergenic | 30.0% | |
GATATTAAATATCAGGAACG+TGG | - | chr4.3:2047258-2047277 | MS.gene015742:intron | 30.0% | |
GCGACAACAATAATTATGTT+TGG | + | chr4.3:2046187-2046206 | None:intergenic | 30.0% | |
GTACAGTAAATGTAAACAAG+AGG | + | chr4.3:2045850-2045869 | None:intergenic | 30.0% | |
TACGTCCTTAATCCTTATAA+AGG | - | chr4.3:2046259-2046278 | MS.gene015742:CDS | 30.0% | |
TATAACAAGCTCTTCATCAA+TGG | - | chr4.3:2044984-2045003 | MS.gene015742:CDS | 30.0% | |
TGTGTCCTTTATAAGGATTA+AGG | + | chr4.3:2046267-2046286 | None:intergenic | 30.0% | |
TTATATATTGACCTTACCTG+AGG | + | chr4.3:2049284-2049303 | None:intergenic | 30.0% | |
TTGGGACCGAAAATTATAAA+GGG | + | chr4.3:2045725-2045744 | None:intergenic | 30.0% | |
TTTGGAGGATATAAAATGAG+TGG | - | chr4.3:2050243-2050262 | MS.gene015742:intron | 30.0% | |
! | ATTGTTGTCGCAAATTTGTT+TGG | - | chr4.3:2046196-2046215 | MS.gene015742:intron | 30.0% |
! | CCTTTCTAGAGAATATGATA+GGG | - | chr4.3:2046401-2046420 | MS.gene015742:intron | 30.0% |
! | CTCATTTTATATCCTCCAAA+AGG | + | chr4.3:2050243-2050262 | None:intergenic | 30.0% |
! | CTCTAAGAATTTGTGTTAAG+AGG | - | chr4.3:2045070-2045089 | MS.gene015742:CDS | 30.0% |
! | GGAGATCCCTTTATAATTTT+CGG | - | chr4.3:2045716-2045735 | MS.gene015742:intron | 30.0% |
! | GGATATAAAATGAGTGGATT+TGG | - | chr4.3:2050249-2050268 | MS.gene015742:CDS | 30.0% |
! | GTGGCTTTTTATGGAAAATT+AGG | - | chr4.3:2047017-2047036 | MS.gene015742:intron | 30.0% |
! | TCCTTTCTAGAGAATATGAT+AGG | - | chr4.3:2046400-2046419 | MS.gene015742:intron | 30.0% |
! | TGGTAACAGTTTTCTATTGT+AGG | - | chr4.3:2049650-2049669 | MS.gene015742:intron | 30.0% |
!!! | ACATTTTAAGACCCAATGAA+TGG | - | chr4.3:2046717-2046736 | MS.gene015742:intron | 30.0% |
!!! | CTAAGCTTGTTGTTTTTGTA+GGG | - | chr4.3:2049128-2049147 | MS.gene015742:intron | 30.0% |
!!! | TCTAAGCTTGTTGTTTTTGT+AGG | - | chr4.3:2049127-2049146 | MS.gene015742:intron | 30.0% |
!!! | TGATTTTTGTTTTTCAACGG+CGG | + | chr4.3:2047862-2047881 | None:intergenic | 30.0% |
!!! | TTTTTTACATTGACCCAAGT+CGG | + | chr4.3:2045659-2045678 | None:intergenic | 30.0% |
AAGTATGGGATGTGAATAAC+AGG | - | chr4.3:2050061-2050080 | MS.gene015742:intron | 35.0% | |
AATACACTACGTTACTATGC+AGG | - | chr4.3:2047405-2047424 | MS.gene015742:intron | 35.0% | |
ACAGAGACTAATCCATTCAT+TGG | + | chr4.3:2046732-2046751 | None:intergenic | 35.0% | |
ACATTAGATGCAATTGATGC+TGG | - | chr4.3:2047336-2047355 | MS.gene015742:intron | 35.0% | |
ACTACTATGTTCATAGGCAT+TGG | + | chr4.3:2045894-2045913 | None:intergenic | 35.0% | |
ACTGATCTTAACTCCAGTAA+TGG | - | chr4.3:2044924-2044943 | MS.gene015742:CDS | 35.0% | |
AGCAGATGATGTTCTTTGTA+AGG | + | chr4.3:2049080-2049099 | None:intergenic | 35.0% | |
ATAAGCATGTCCTCCTAAAT+AGG | + | chr4.3:2049919-2049938 | None:intergenic | 35.0% | |
ATACCATCACTCTCTGTATT+AGG | - | chr4.3:2047910-2047929 | MS.gene015742:CDS | 35.0% | |
ATATGTACCGTACTATGCTT+GGG | + | chr4.3:2046158-2046177 | None:intergenic | 35.0% | |
ATGTTCGCTTGTTTAGAAAG+CGG | + | chr4.3:2045433-2045452 | None:intergenic | 35.0% | |
CAGAGACTAATCCATTCATT+GGG | + | chr4.3:2046731-2046750 | None:intergenic | 35.0% | |
CATGTTTCACTTGAATTAGG+AGG | - | chr4.3:2048945-2048964 | MS.gene015742:intron | 35.0% | |
CTGATCTTAACTCCAGTAAT+GGG | - | chr4.3:2044925-2044944 | MS.gene015742:CDS | 35.0% | |
CTTGGGACCGAAAATTATAA+AGG | + | chr4.3:2045726-2045745 | None:intergenic | 35.0% | |
GCATAAAACAAAGCAGAAAG+AGG | + | chr4.3:2047621-2047640 | None:intergenic | 35.0% | |
GCATCATCGAAAATTATGAG+AGG | + | chr4.3:2048978-2048997 | None:intergenic | 35.0% | |
GGTCAGGTATTAAAATCTTC+TGG | - | chr4.3:2047447-2047466 | MS.gene015742:intron | 35.0% | |
GTGATTGCAAGAATAAGTGA+AGG | - | chr4.3:2047077-2047096 | MS.gene015742:intron | 35.0% | |
GTTTGCAATATCCAAGTTCT+TGG | + | chr4.3:2050151-2050170 | None:intergenic | 35.0% | |
TATCCTAATACAGAGAGTGA+TGG | + | chr4.3:2047916-2047935 | None:intergenic | 35.0% | |
TCTCTTTCCATGCTCAATAT+AGG | + | chr4.3:2049706-2049725 | None:intergenic | 35.0% | |
TGATCTTAACTCCAGTAATG+GGG | - | chr4.3:2044926-2044945 | MS.gene015742:CDS | 35.0% | |
TGCTGATAAAATTCATGGTC+AGG | - | chr4.3:2047431-2047450 | MS.gene015742:intron | 35.0% | |
TGGATAAACTCTTATCTTGC+CGG | - | chr4.3:2050204-2050223 | MS.gene015742:intron | 35.0% | |
TGTAATCTCTAGTATGTTCG+AGG | - | chr4.3:2046452-2046471 | MS.gene015742:intron | 35.0% | |
TGTATGATGGCCATAATCAT+GGG | + | chr4.3:2048691-2048710 | None:intergenic | 35.0% | |
TTGTATGATGGCCATAATCA+TGG | + | chr4.3:2048692-2048711 | None:intergenic | 35.0% | |
TTTACAGGTTCAGTTGAAGT+AGG | - | chr4.3:2048882-2048901 | MS.gene015742:intron | 35.0% | |
TTTGATCCTAAAACTCAGCA+AGG | - | chr4.3:2049257-2049276 | MS.gene015742:intron | 35.0% | |
TTTGGGTATCCTAACTAACA+AGG | - | chr4.3:2049028-2049047 | MS.gene015742:intron | 35.0% | |
! | CAAGTTGAATACTTTCTGAC+AGG | + | chr4.3:2049397-2049416 | None:intergenic | 35.0% |
! | CCCTATCATATTCTCTAGAA+AGG | + | chr4.3:2046404-2046423 | None:intergenic | 35.0% |
! | GTAAGGAAAAGATTTTCGGA+AGG | + | chr4.3:2049063-2049082 | None:intergenic | 35.0% |
! | GTTTTCTATTGTAGGCTGAT+AGG | - | chr4.3:2049658-2049677 | MS.gene015742:intron | 35.0% |
! | TTTTTACATTGACCCAAGTC+GGG | + | chr4.3:2045658-2045677 | None:intergenic | 35.0% |
!! | AATGTTTGTGTTCTAAAGGC+TGG | - | chr4.3:2047707-2047726 | MS.gene015742:CDS | 35.0% |
!! | AGCCATGTTGGCTTATTTAA+CGG | - | chr4.3:2046856-2046875 | MS.gene015742:intron | 35.0% |
!! | AGCTTGTTATACTTGATGGT+CGG | + | chr4.3:2044975-2044994 | None:intergenic | 35.0% |
!! | CCCTTTGATTTTGTATCTTC+AGG | - | chr4.3:2048854-2048873 | MS.gene015742:intron | 35.0% |
!! | CTGTCAGAAAGTATTCAACT+TGG | - | chr4.3:2049395-2049414 | MS.gene015742:intron | 35.0% |
!! | GAAGAGCTTGTTATACTTGA+TGG | + | chr4.3:2044979-2044998 | None:intergenic | 35.0% |
!!! | GATTTTGTCGATTCTGTATC+AGG | - | chr4.3:2045008-2045027 | MS.gene015742:CDS | 35.0% |
!!! | GGTGGTGGGTTTTTATATTT+TGG | + | chr4.3:2045412-2045431 | None:intergenic | 35.0% |
!!! | TGCTGAGTTTTAGGATCAAA+AGG | + | chr4.3:2049257-2049276 | None:intergenic | 35.0% |
AAATAAGGACCCTACTAGGT+TGG | - | chr4.3:2049625-2049644 | MS.gene015742:intron | 40.0% | |
AACATACAACACCAGACATC+CGG | + | chr4.3:2047169-2047188 | None:intergenic | 40.0% | |
AACTTCATTAGTGCCATCAC+AGG | + | chr4.3:2049964-2049983 | None:intergenic | 40.0% | |
AAGAGATGAGATGCTCACTA+AGG | - | chr4.3:2045246-2045265 | MS.gene015742:intron | 40.0% | |
AAGCATTTGATTCAGGTCCA+TGG | - | chr4.3:2047141-2047160 | MS.gene015742:intron | 40.0% | |
AATTAGACAAGTGTGTCTGC+AGG | + | chr4.3:2048005-2048024 | None:intergenic | 40.0% | |
ACTACATTCAGCACTCCATT+TGG | + | chr4.3:2047737-2047756 | None:intergenic | 40.0% | |
ACTTCATTAGTGCCATCACA+GGG | + | chr4.3:2049963-2049982 | None:intergenic | 40.0% | |
AGCCAGGGAGAATTGTAAAT+AGG | + | chr4.3:2050333-2050352 | None:intergenic | 40.0% | |
AGTGCCAACAATACCAGATA+TGG | - | chr4.3:2050105-2050124 | MS.gene015742:intron | 40.0% | |
ATAAACTCTTATCTTGCCGG+GGG | - | chr4.3:2050207-2050226 | MS.gene015742:intron | 40.0% | |
ATAGGCTCATAGCATTAGCA+TGG | + | chr4.3:2049517-2049536 | None:intergenic | 40.0% | |
ATTCCATGCATACACACTGA+TGG | - | chr4.3:2047473-2047492 | MS.gene015742:CDS | 40.0% | |
ATTGAGCATGGAAAGAGAGA+AGG | - | chr4.3:2049708-2049727 | MS.gene015742:intron | 40.0% | |
CAACATGGCTTGAGTATACT+TGG | + | chr4.3:2046846-2046865 | None:intergenic | 40.0% | |
CAAGTATACTCAAGCCATGT+TGG | - | chr4.3:2046844-2046863 | MS.gene015742:intron | 40.0% | |
CAATCACATCTCCTGTTCTT+GGG | + | chr4.3:2047064-2047083 | None:intergenic | 40.0% | |
CACCTATTTACAATTCTCCC+TGG | - | chr4.3:2050328-2050347 | MS.gene015742:CDS | 40.0% | |
CCTTATAAAGGACACACCAT+GGG | - | chr4.3:2046271-2046290 | MS.gene015742:CDS | 40.0% | |
CGCTGCAACGTAATTCTAAA+AGG | - | chr4.3:2045941-2045960 | MS.gene015742:intron | 40.0% | |
CTAATTTACGTTGAGTCCCA+AGG | - | chr4.3:2045916-2045935 | MS.gene015742:intron | 40.0% | |
CTACATTCAGCACTCCATTT+GGG | + | chr4.3:2047736-2047755 | None:intergenic | 40.0% | |
CTGCAGCTTGCATTATTTCA+CGG | + | chr4.3:2048908-2048927 | None:intergenic | 40.0% | |
CTTGAAGAAGCCGTCAAATA+AGG | - | chr4.3:2049610-2049629 | MS.gene015742:intron | 40.0% | |
GAAACAATAGACCCAAGAAC+AGG | - | chr4.3:2047050-2047069 | MS.gene015742:intron | 40.0% | |
GAACTAAGAAAGTGAGGCAT+AGG | + | chr4.3:2049535-2049554 | None:intergenic | 40.0% | |
GATAAACTCTTATCTTGCCG+GGG | - | chr4.3:2050206-2050225 | MS.gene015742:intron | 40.0% | |
GATATGTACCGTACTATGCT+TGG | + | chr4.3:2046159-2046178 | None:intergenic | 40.0% | |
GCTTTCTAAACAAGCGAACA+TGG | - | chr4.3:2045432-2045451 | MS.gene015742:intron | 40.0% | |
GGATAAACTCTTATCTTGCC+GGG | - | chr4.3:2050205-2050224 | MS.gene015742:intron | 40.0% | |
GGTATTGTTGGCACTCTTAA+TGG | + | chr4.3:2050100-2050119 | None:intergenic | 40.0% | |
GGTTGCTCATAGTTTAGCTA+GGG | - | chr4.3:2045453-2045472 | MS.gene015742:intron | 40.0% | |
TACACACTGATGGAACCAAT+TGG | - | chr4.3:2047483-2047502 | MS.gene015742:CDS | 40.0% | |
TAGGCCATATCTGGTATTGT+TGG | + | chr4.3:2050112-2050131 | None:intergenic | 40.0% | |
TATCTTCAGGTCAGCTTTAC+AGG | - | chr4.3:2048867-2048886 | MS.gene015742:intron | 40.0% | |
TATGTACCGTACTATGCTTG+GGG | + | chr4.3:2046157-2046176 | None:intergenic | 40.0% | |
TCAAGAGTTATTGGATCTGG+TGG | + | chr4.3:2045302-2045321 | None:intergenic | 40.0% | |
TCAGTGTGTATGCATGGAAT+TGG | + | chr4.3:2047473-2047492 | None:intergenic | 40.0% | |
TCCTTATAAAGGACACACCA+TGG | - | chr4.3:2046270-2046289 | MS.gene015742:CDS | 40.0% | |
TGAAATATTTGGCCCTGTGA+TGG | - | chr4.3:2049948-2049967 | MS.gene015742:intron | 40.0% | |
TGCTCAAGAGTTATTGGATC+TGG | + | chr4.3:2045305-2045324 | None:intergenic | 40.0% | |
TGGTTGCTCATAGTTTAGCT+AGG | - | chr4.3:2045452-2045471 | MS.gene015742:intron | 40.0% | |
TTAGGATACCCAAAAGAGCA+AGG | + | chr4.3:2049022-2049041 | None:intergenic | 40.0% | |
TTATCCAAATAACGCCTGCA+CGG | + | chr4.3:2050191-2050210 | None:intergenic | 40.0% | |
TTCTCGTGCTCAAGAGTTAT+TGG | + | chr4.3:2045311-2045330 | None:intergenic | 40.0% | |
! | AATTAGACTTCGGAGTGTCT+TGG | - | chr4.3:2048737-2048756 | MS.gene015742:intron | 40.0% |
! | AGTGGATTTGGAAGAGATCT+GGG | - | chr4.3:2050261-2050280 | MS.gene015742:CDS | 40.0% |
! | CTAGTAGGGTCCTTATTTGA+CGG | + | chr4.3:2049623-2049642 | None:intergenic | 40.0% |
!! | ATGGAACCAATTGGTGTTGT+GGG | - | chr4.3:2047492-2047511 | MS.gene015742:CDS | 40.0% |
!! | CCATGTTGGCTTATTTAACG+GGG | - | chr4.3:2046858-2046877 | MS.gene015742:intron | 40.0% |
!! | GCCATGTTGGCTTATTTAAC+GGG | - | chr4.3:2046857-2046876 | MS.gene015742:intron | 40.0% |
!! | GGTGCTGCTGATAAAATTCA+TGG | - | chr4.3:2047426-2047445 | MS.gene015742:intron | 40.0% |
!! | TTCATGCGTCTCTGAAATCA+TGG | - | chr4.3:2047971-2047990 | MS.gene015742:CDS | 40.0% |
AAAAGCGAGCCTATGTTCAC+AGG | - | chr4.3:2049364-2049383 | MS.gene015742:intron | 45.0% | |
AAAAGGATCTCCAATGACCC+AGG | + | chr4.3:2049240-2049259 | None:intergenic | 45.0% | |
AACAAGCCCCAAGCATAGTA+CGG | - | chr4.3:2046148-2046167 | MS.gene015742:intron | 45.0% | |
AAGAGGTCCACCCATGATTA+TGG | - | chr4.3:2048678-2048697 | MS.gene015742:intron | 45.0% | |
AATTACGTTGCAGCGAACCT+TGG | + | chr4.3:2045936-2045955 | None:intergenic | 45.0% | |
ACATACAACACCAGACATCC+GGG | + | chr4.3:2047168-2047187 | None:intergenic | 45.0% | |
AGAGGGAGCAAAAGTGAAGA+TGG | - | chr4.3:2048414-2048433 | MS.gene015742:intron | 45.0% | |
AGATGCAATTGATGCTGGCA+AGG | - | chr4.3:2047341-2047360 | MS.gene015742:intron | 45.0% | |
ATGATGGCCATAATCATGGG+TGG | + | chr4.3:2048688-2048707 | None:intergenic | 45.0% | |
ATGGCCATCATACAAGAGAC+TGG | - | chr4.3:2048697-2048716 | MS.gene015742:intron | 45.0% | |
ATGTGTCCCACAACACCAAT+TGG | + | chr4.3:2047501-2047520 | None:intergenic | 45.0% | |
ATGTTCCCGTGTGTTTGTTC+AGG | - | chr4.3:2049166-2049185 | MS.gene015742:intron | 45.0% | |
ATTACGTTGCAGCGAACCTT+GGG | + | chr4.3:2045935-2045954 | None:intergenic | 45.0% | |
CCCATGGTGTGTCCTTTATA+AGG | + | chr4.3:2046274-2046293 | None:intergenic | 45.0% | |
CCCCGTTAAATAAGCCAACA+TGG | + | chr4.3:2046861-2046880 | None:intergenic | 45.0% | |
CGCATGAAGAGAGTGAAACT+TGG | + | chr4.3:2047959-2047978 | None:intergenic | 45.0% | |
CGTCAAATAAGGACCCTACT+AGG | - | chr4.3:2049621-2049640 | MS.gene015742:intron | 45.0% | |
CTAAAGGCTGGAATCCCAAA+TGG | - | chr4.3:2047719-2047738 | MS.gene015742:CDS | 45.0% | |
CTCACACATGGACATAGATG+TGG | - | chr4.3:2047793-2047812 | MS.gene015742:CDS | 45.0% | |
CTGAATGTAGTACCCGGATT+TGG | - | chr4.3:2047746-2047765 | MS.gene015742:CDS | 45.0% | |
CTTGTTTAGAAAGCGGTGGT+GGG | + | chr4.3:2045426-2045445 | None:intergenic | 45.0% | |
GACGGCTTCTTCAAGCATTT+AGG | + | chr4.3:2049605-2049624 | None:intergenic | 45.0% | |
GCAATCACATCTCCTGTTCT+TGG | + | chr4.3:2047065-2047084 | None:intergenic | 45.0% | |
GCATACCAGCTTAGCTAGAT+GGG | + | chr4.3:2047643-2047662 | None:intergenic | 45.0% | |
GTTACCAAGCCAACCTAGTA+GGG | + | chr4.3:2049637-2049656 | None:intergenic | 45.0% | |
GTTCCATCAGTGTGTATGCA+TGG | + | chr4.3:2047479-2047498 | None:intergenic | 45.0% | |
TAAAACTCAGCAAGGACCTC+AGG | - | chr4.3:2049265-2049284 | MS.gene015742:intron | 45.0% | |
TATGTTCGAGGCTCAGTCTA+AGG | - | chr4.3:2046464-2046483 | MS.gene015742:intron | 45.0% | |
TCCCTTCCTGAACAAACACA+CGG | + | chr4.3:2049175-2049194 | None:intergenic | 45.0% | |
TCTCACAATCATCGAACCAC+AGG | - | chr4.3:2049327-2049346 | MS.gene015742:intron | 45.0% | |
TGCACCAGTCTCTTGTATGA+TGG | + | chr4.3:2048704-2048723 | None:intergenic | 45.0% | |
TGCATACCAGCTTAGCTAGA+TGG | + | chr4.3:2047644-2047663 | None:intergenic | 45.0% | |
TGTTACCAAGCCAACCTAGT+AGG | + | chr4.3:2049638-2049657 | None:intergenic | 45.0% | |
TTATGCCCATCTAGCTAAGC+TGG | - | chr4.3:2047635-2047654 | MS.gene015742:CDS | 45.0% | |
TTCAGCAGGTTTGAGAACCA+TGG | + | chr4.3:2047592-2047611 | None:intergenic | 45.0% | |
TTCATCAACCTGCCCCTAAA+TGG | + | chr4.3:2050027-2050046 | None:intergenic | 45.0% | |
TTCGCTTGTTTAGAAAGCGG+TGG | + | chr4.3:2045430-2045449 | None:intergenic | 45.0% | |
TTGACATACCATTTAGGGGC+AGG | - | chr4.3:2050016-2050035 | MS.gene015742:intron | 45.0% | |
TTGACTGGAGGTAGAAGAGT+GGG | - | chr4.3:2049741-2049760 | MS.gene015742:intron | 45.0% | |
TTGTGGGACACATCATTCCA+TGG | - | chr4.3:2047508-2047527 | MS.gene015742:CDS | 45.0% | |
TTTAGCAGGAATTCCACCTG+TGG | + | chr4.3:2049346-2049365 | None:intergenic | 45.0% | |
! | AAAAGGAATGTCACTTCCCC+CGG | + | chr4.3:2050226-2050245 | None:intergenic | 45.0% |
! | AGCTGTTGACCTTGCTCTTT+TGG | - | chr4.3:2049010-2049029 | MS.gene015742:intron | 45.0% |
! | AGGCATTGTGACCAAGAACT+TGG | - | chr4.3:2050137-2050156 | MS.gene015742:intron | 45.0% |
! | CGTAGTGTATTTGCTGCTGA+AGG | + | chr4.3:2047396-2047415 | None:intergenic | 45.0% |
! | GAACGATACTTAAGTGCCGT+TGG | + | chr4.3:2047890-2047909 | None:intergenic | 45.0% |
! | GAGTGGATTTGGAAGAGATC+TGG | - | chr4.3:2050260-2050279 | MS.gene015742:CDS | 45.0% |
! | GATGGTCGGCATTTTGAACA+AGG | + | chr4.3:2044961-2044980 | None:intergenic | 45.0% |
! | GCACGTGAAGCATTTGATTC+AGG | - | chr4.3:2047134-2047153 | MS.gene015742:intron | 45.0% |
! | GCTGTTGACCTTGCTCTTTT+GGG | - | chr4.3:2049011-2049030 | MS.gene015742:intron | 45.0% |
! | GGAAGTGACATTCCTTTTGG+AGG | - | chr4.3:2050228-2050247 | MS.gene015742:intron | 45.0% |
! | GTTGGCTTATTTAACGGGGT+AGG | - | chr4.3:2046862-2046881 | MS.gene015742:intron | 45.0% |
! | TGAGGTCCTTGCTGAGTTTT+AGG | + | chr4.3:2049266-2049285 | None:intergenic | 45.0% |
!! | ATTGAAGTGGGAGCATTCCA+TGG | + | chr4.3:2047528-2047547 | None:intergenic | 45.0% |
!! | GAAAGAGGTGTTTGTTCAGC+AGG | + | chr4.3:2047606-2047625 | None:intergenic | 45.0% |
!! | GATGGAACCAATTGGTGTTG+TGG | - | chr4.3:2047491-2047510 | MS.gene015742:CDS | 45.0% |
!! | GGAGTGTCTTGGAGCAATTT+TGG | - | chr4.3:2048748-2048767 | MS.gene015742:intron | 45.0% |
!! | TTTAGGGGCAGGTTGATGAA+TGG | - | chr4.3:2050027-2050046 | MS.gene015742:intron | 45.0% |
!!! | ACATAGGCTCGCTTTTTAGC+AGG | + | chr4.3:2049360-2049379 | None:intergenic | 45.0% |
!!! | GCTCTTTTGACTTATGCCCA+TGG | + | chr4.3:2046290-2046309 | None:intergenic | 45.0% |
!!! | AAATAATAAGAATAATTTTT+CGG | - | chr4.3:2045694-2045713 | MS.gene015742:intron | 5.0% |
AAAAGAGCCGAGGATGAGCT+AGG | - | chr4.3:2046302-2046321 | MS.gene015742:CDS | 50.0% | |
AAATTTGTCCGGTCCCGACT+TGG | - | chr4.3:2045642-2045661 | MS.gene015742:intron | 50.0% | |
AAGGCAAAAGCCTGGGTCAT+TGG | - | chr4.3:2049227-2049246 | MS.gene015742:intron | 50.0% | |
AAGTGTGTCTGCAGGACACT+GGG | + | chr4.3:2047997-2048016 | None:intergenic | 50.0% | |
AATTTGTCCGGTCCCGACTT+GGG | - | chr4.3:2045643-2045662 | MS.gene015742:intron | 50.0% | |
ACCAGCAGTTGGACCAAATC+CGG | + | chr4.3:2047762-2047781 | None:intergenic | 50.0% | |
CACAATCATCGAACCACAGG+TGG | - | chr4.3:2049330-2049349 | MS.gene015742:intron | 50.0% | |
CATACAACACCAGACATCCG+GGG | + | chr4.3:2047167-2047186 | None:intergenic | 50.0% | |
CCCGTGTGTTTGTTCAGGAA+GGG | - | chr4.3:2049171-2049190 | MS.gene015742:intron | 50.0% | |
CCCTTCCTGAACAAACACAC+GGG | + | chr4.3:2049174-2049193 | None:intergenic | 50.0% | |
CTAAGGTGGGAGAGCTTGAT+AGG | - | chr4.3:2046481-2046500 | MS.gene015742:intron | 50.0% | |
CTTGACTGGAGGTAGAAGAG+TGG | - | chr4.3:2049740-2049759 | MS.gene015742:intron | 50.0% | |
GAAGGAGCTACACTCTTGAC+TGG | - | chr4.3:2049726-2049745 | MS.gene015742:intron | 50.0% | |
GCTTGATAGGTCTCTCACTG+AGG | - | chr4.3:2046494-2046513 | MS.gene015742:intron | 50.0% | |
GCTTGTTTAGAAAGCGGTGG+TGG | + | chr4.3:2045427-2045446 | None:intergenic | 50.0% | |
GGAGGACATGCTTATAGCAC+AGG | - | chr4.3:2049924-2049943 | MS.gene015742:intron | 50.0% | |
GGCATAAGTCAAAAGAGCCG+AGG | - | chr4.3:2046292-2046311 | MS.gene015742:CDS | 50.0% | |
GGGCTTAGAGCCTAACATAG+AGG | + | chr4.3:2046916-2046935 | None:intergenic | 50.0% | |
TCCCGTGTGTTTGTTCAGGA+AGG | - | chr4.3:2049170-2049189 | MS.gene015742:intron | 50.0% | |
TGCTGCAATCAGCTCACACA+TGG | - | chr4.3:2047781-2047800 | MS.gene015742:CDS | 50.0% | |
! | GGGGGAAGTGACATTCCTTT+TGG | - | chr4.3:2050225-2050244 | MS.gene015742:intron | 50.0% |
! | TTCGAGGCTCAGTCTAAGGT+GGG | - | chr4.3:2046468-2046487 | MS.gene015742:intron | 50.0% |
!! | GGAGTGCTGAATGTAGTACC+CGG | - | chr4.3:2047740-2047759 | MS.gene015742:CDS | 50.0% |
ACATTGACCCAAGTCGGGAC+CGG | + | chr4.3:2045653-2045672 | None:intergenic | 55.0% | |
ACCAGATATGGCCTAGCAGC+AGG | - | chr4.3:2050117-2050136 | MS.gene015742:intron | 55.0% | |
AGGTAGAAGAGTGGGCAGTC+AGG | - | chr4.3:2049749-2049768 | MS.gene015742:intron | 55.0% | |
CAAGTGTGTCTGCAGGACAC+TGG | + | chr4.3:2047998-2048017 | None:intergenic | 55.0% | |
CCAAATAACGCCTGCACGGA+TGG | + | chr4.3:2050187-2050206 | None:intergenic | 55.0% | |
CCAGCAGTTGGACCAAATCC+GGG | + | chr4.3:2047761-2047780 | None:intergenic | 55.0% | |
CCATCCGTGCAGGCGTTATT+TGG | - | chr4.3:2050184-2050203 | MS.gene015742:intron | 55.0% | |
CTCAGCAAGGACCTCAGGTA+AGG | - | chr4.3:2049270-2049289 | MS.gene015742:intron | 55.0% | |
CTGATTGCAGCACCAGCAGT+TGG | + | chr4.3:2047773-2047792 | None:intergenic | 55.0% | |
GCCACTACCTAGCTCATCCT+CGG | + | chr4.3:2046312-2046331 | None:intergenic | 55.0% | |
GGAGCTACACTCTTGACTGG+AGG | - | chr4.3:2049729-2049748 | MS.gene015742:intron | 55.0% | |
GGAGCTGTTGTCCCCATTAC+TGG | + | chr4.3:2044940-2044959 | None:intergenic | 55.0% | |
GGCTGACAGCCTGTGAACAT+AGG | + | chr4.3:2049376-2049395 | None:intergenic | 55.0% | |
GGTAGAAGAGTGGGCAGTCA+GGG | - | chr4.3:2049750-2049769 | MS.gene015742:intron | 55.0% | |
GTTCGAGGCTCAGTCTAAGG+TGG | - | chr4.3:2046467-2046486 | MS.gene015742:intron | 55.0% | |
GTTTCAAGGTCCATCCGTGC+AGG | - | chr4.3:2050174-2050193 | MS.gene015742:intron | 55.0% | |
TCAGCCCTTCCTTAGCTGCT+GGG | - | chr4.3:2047562-2047581 | MS.gene015742:intron | 55.0% | |
TGCACCCAGCAGCTAAGGAA+GGG | + | chr4.3:2047569-2047588 | None:intergenic | 55.0% | |
TGGTCACAATGCCTGCTGCT+AGG | + | chr4.3:2050131-2050150 | None:intergenic | 55.0% | |
TTGATTCAGGTCCATGGCCC+CGG | - | chr4.3:2047147-2047166 | MS.gene015742:intron | 55.0% | |
! | ACGGTGACTAGCCCAAGAAC+AGG | + | chr4.3:2045482-2045501 | None:intergenic | 55.0% |
! | AGCTAGGGCGTCCTGTTCTT+GGG | - | chr4.3:2045468-2045487 | MS.gene015742:CDS | 55.0% |
! | AGGACCCTACTAGGTTGGCT+TGG | - | chr4.3:2049630-2049649 | MS.gene015742:intron | 55.0% |
! | TAGCTAGGGCGTCCTGTTCT+TGG | - | chr4.3:2045467-2045486 | MS.gene015742:intron | 55.0% |
!! | AGGGGCAGGTTGATGAATGG+TGG | - | chr4.3:2050030-2050049 | MS.gene015742:intron | 55.0% |
CATGGTGCACCCAGCAGCTA+AGG | + | chr4.3:2047574-2047593 | None:intergenic | 60.0% | |
CTTAGCTGCTGGGTGCACCA+TGG | - | chr4.3:2047572-2047591 | MS.gene015742:intron | 60.0% | |
GCCGAGGATGAGCTAGGTAG+TGG | - | chr4.3:2046308-2046327 | MS.gene015742:CDS | 60.0% | |
GCCTGCTGCTAGGCCATATC+TGG | + | chr4.3:2050121-2050140 | None:intergenic | 60.0% | |
GTCAGCCCTTCCTTAGCTGC+TGG | - | chr4.3:2047561-2047580 | MS.gene015742:intron | 60.0% | |
GTGCACCCAGCAGCTAAGGA+AGG | + | chr4.3:2047570-2047589 | None:intergenic | 60.0% | |
! | CCCGGATTTGGTCCAACTGC+TGG | - | chr4.3:2047758-2047777 | MS.gene015742:CDS | 60.0% |
ACACCAGACATCCGGGGCCA+TGG | + | chr4.3:2047161-2047180 | None:intergenic | 65.0% | |
GGTCCATGGCCCCGGATGTC+TGG | - | chr4.3:2047155-2047174 | MS.gene015742:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 2044921 | 2050356 | 2044921 | ID=MS.gene015742 |
chr4.3 | mRNA | 2044921 | 2050356 | 2044921 | ID=MS.gene015742.t1;Parent=MS.gene015742 |
chr4.3 | exon | 2050248 | 2050356 | 2050248 | ID=MS.gene015742.t1.exon1;Parent=MS.gene015742.t1 |
chr4.3 | CDS | 2050248 | 2050356 | 2050248 | ID=cds.MS.gene015742.t1;Parent=MS.gene015742.t1 |
chr4.3 | exon | 2048096 | 2048238 | 2048096 | ID=MS.gene015742.t1.exon2;Parent=MS.gene015742.t1 |
chr4.3 | CDS | 2048096 | 2048238 | 2048096 | ID=cds.MS.gene015742.t1;Parent=MS.gene015742.t1 |
chr4.3 | exon | 2047621 | 2048004 | 2047621 | ID=MS.gene015742.t1.exon3;Parent=MS.gene015742.t1 |
chr4.3 | CDS | 2047621 | 2048004 | 2047621 | ID=cds.MS.gene015742.t1;Parent=MS.gene015742.t1 |
chr4.3 | exon | 2047463 | 2047552 | 2047463 | ID=MS.gene015742.t1.exon4;Parent=MS.gene015742.t1 |
chr4.3 | CDS | 2047463 | 2047552 | 2047463 | ID=cds.MS.gene015742.t1;Parent=MS.gene015742.t1 |
chr4.3 | exon | 2046228 | 2046401 | 2046228 | ID=MS.gene015742.t1.exon5;Parent=MS.gene015742.t1 |
chr4.3 | CDS | 2046228 | 2046401 | 2046228 | ID=cds.MS.gene015742.t1;Parent=MS.gene015742.t1 |
chr4.3 | exon | 2045991 | 2046128 | 2045991 | ID=MS.gene015742.t1.exon6;Parent=MS.gene015742.t1 |
chr4.3 | CDS | 2045991 | 2046128 | 2045991 | ID=cds.MS.gene015742.t1;Parent=MS.gene015742.t1 |
chr4.3 | exon | 2045468 | 2045605 | 2045468 | ID=MS.gene015742.t1.exon7;Parent=MS.gene015742.t1 |
chr4.3 | CDS | 2045468 | 2045605 | 2045468 | ID=cds.MS.gene015742.t1;Parent=MS.gene015742.t1 |
chr4.3 | exon | 2045291 | 2045352 | 2045291 | ID=MS.gene015742.t1.exon8;Parent=MS.gene015742.t1 |
chr4.3 | CDS | 2045291 | 2045352 | 2045291 | ID=cds.MS.gene015742.t1;Parent=MS.gene015742.t1 |
chr4.3 | exon | 2044921 | 2045194 | 2044921 | ID=MS.gene015742.t1.exon9;Parent=MS.gene015742.t1 |
chr4.3 | CDS | 2044921 | 2045194 | 2044921 | ID=cds.MS.gene015742.t1;Parent=MS.gene015742.t1 |
Gene Sequence |
Protein sequence |