Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04770.t1 | XP_003629648.1 | 96.8 | 503 | 16 | 0 | 1 | 503 | 1 | 503 | 3.40E-279 | 970.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04770.t1 | Q56YU0 | 67.7 | 495 | 159 | 1 | 10 | 503 | 7 | 501 | 1.8e-199 | 696.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04770.t1 | G7L8Y6 | 96.8 | 503 | 16 | 0 | 1 | 503 | 1 | 503 | 2.5e-279 | 970.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04770.t1 | MTR_8g083530 | 96.819 | 503 | 16 | 0 | 1 | 503 | 1 | 503 | 0.0 | 1005 |
MS.gene04770.t1 | MTR_6g086300 | 79.000 | 500 | 105 | 0 | 4 | 503 | 3 | 502 | 0.0 | 815 |
MS.gene04770.t1 | MTR_6g086300 | 79.000 | 500 | 105 | 0 | 4 | 503 | 3 | 502 | 0.0 | 815 |
MS.gene04770.t1 | MTR_8g083520 | 78.189 | 486 | 73 | 1 | 18 | 503 | 9 | 461 | 0.0 | 785 |
MS.gene04770.t1 | MTR_6g086340 | 76.305 | 498 | 116 | 1 | 6 | 503 | 5 | 500 | 0.0 | 776 |
MS.gene04770.t1 | MTR_8g083530 | 96.821 | 346 | 11 | 0 | 1 | 346 | 1 | 346 | 0.0 | 692 |
MS.gene04770.t1 | MTR_8g083520 | 78.261 | 414 | 57 | 1 | 90 | 503 | 1 | 381 | 0.0 | 667 |
MS.gene04770.t1 | MTR_4g107040 | 54.021 | 485 | 223 | 0 | 19 | 503 | 60 | 544 | 0.0 | 563 |
MS.gene04770.t1 | MTR_3g078170 | 54.339 | 484 | 221 | 0 | 20 | 503 | 59 | 542 | 0.0 | 560 |
MS.gene04770.t1 | MTR_8g064170 | 54.132 | 484 | 222 | 0 | 20 | 503 | 58 | 541 | 0.0 | 559 |
MS.gene04770.t1 | MTR_8g064170 | 50.000 | 484 | 210 | 1 | 20 | 503 | 58 | 509 | 1.97e-177 | 508 |
MS.gene04770.t1 | MTR_3g078170 | 53.518 | 398 | 185 | 0 | 20 | 417 | 59 | 456 | 3.41e-156 | 452 |
MS.gene04770.t1 | MTR_3g078170 | 53.351 | 373 | 174 | 0 | 20 | 392 | 59 | 431 | 8.83e-144 | 420 |
MS.gene04770.t1 | MTR_3g078170 | 53.351 | 373 | 174 | 0 | 20 | 392 | 59 | 431 | 1.61e-143 | 420 |
MS.gene04770.t1 | MTR_4g106510 | 39.837 | 492 | 285 | 5 | 20 | 502 | 5 | 494 | 1.74e-111 | 340 |
MS.gene04770.t1 | MTR_3g078550 | 38.337 | 493 | 293 | 5 | 19 | 502 | 4 | 494 | 1.59e-109 | 335 |
MS.gene04770.t1 | MTR_3g078490 | 38.037 | 489 | 292 | 5 | 23 | 502 | 38 | 524 | 5.39e-108 | 332 |
MS.gene04770.t1 | MTR_3g078550 | 39.446 | 469 | 269 | 6 | 43 | 502 | 2 | 464 | 1.92e-105 | 323 |
MS.gene04770.t1 | MTR_2g067660 | 35.484 | 496 | 307 | 6 | 2 | 494 | 30 | 515 | 1.12e-98 | 307 |
MS.gene04770.t1 | MTR_1690s0010 | 40.870 | 345 | 199 | 4 | 23 | 365 | 9 | 350 | 2.58e-80 | 254 |
MS.gene04770.t1 | MTR_3g078490 | 36.283 | 339 | 207 | 4 | 20 | 351 | 5 | 341 | 7.55e-59 | 199 |
MS.gene04770.t1 | MTR_2g034160 | 28.964 | 473 | 316 | 9 | 36 | 494 | 62 | 528 | 1.08e-58 | 204 |
MS.gene04770.t1 | MTR_2g042330 | 29.545 | 484 | 322 | 13 | 26 | 500 | 25 | 498 | 9.03e-57 | 197 |
MS.gene04770.t1 | MTR_4g093170 | 31.393 | 481 | 306 | 11 | 26 | 493 | 45 | 514 | 2.31e-53 | 189 |
MS.gene04770.t1 | MTR_1g014320 | 27.642 | 492 | 322 | 9 | 26 | 499 | 19 | 494 | 3.01e-53 | 187 |
MS.gene04770.t1 | MTR_4g131180 | 27.423 | 485 | 322 | 8 | 24 | 494 | 17 | 485 | 5.75e-53 | 186 |
MS.gene04770.t1 | MTR_2g009750 | 31.185 | 481 | 307 | 11 | 26 | 493 | 18 | 487 | 1.29e-52 | 186 |
MS.gene04770.t1 | MTR_2g009750 | 31.042 | 480 | 308 | 11 | 26 | 493 | 18 | 486 | 5.85e-52 | 184 |
MS.gene04770.t1 | MTR_2g009750 | 31.042 | 480 | 308 | 11 | 26 | 493 | 17 | 485 | 7.27e-52 | 184 |
MS.gene04770.t1 | MTR_4g131180 | 27.293 | 458 | 303 | 8 | 24 | 467 | 17 | 458 | 1.51e-49 | 177 |
MS.gene04770.t1 | MTR_1399s0020 | 29.333 | 375 | 211 | 6 | 122 | 493 | 14 | 337 | 2.73e-38 | 143 |
MS.gene04770.t1 | MTR_1g029840 | 28.199 | 422 | 279 | 14 | 66 | 476 | 20 | 428 | 1.43e-29 | 121 |
MS.gene04770.t1 | MTR_8g076480 | 27.293 | 447 | 297 | 13 | 61 | 494 | 8 | 439 | 2.90e-29 | 120 |
MS.gene04770.t1 | MTR_8g094600 | 26.857 | 350 | 246 | 7 | 154 | 500 | 163 | 505 | 2.24e-28 | 119 |
MS.gene04770.t1 | MTR_1g029840 | 29.107 | 347 | 230 | 10 | 154 | 494 | 110 | 446 | 2.41e-28 | 118 |
MS.gene04770.t1 | MTR_2g097950 | 26.722 | 479 | 295 | 17 | 56 | 502 | 14 | 468 | 8.28e-27 | 114 |
MS.gene04770.t1 | MTR_3g088150 | 26.622 | 447 | 290 | 14 | 66 | 494 | 22 | 448 | 2.33e-26 | 112 |
MS.gene04770.t1 | MTR_1222s0010 | 28.852 | 357 | 226 | 10 | 92 | 437 | 33 | 372 | 5.47e-26 | 112 |
MS.gene04770.t1 | MTR_4g065040 | 29.260 | 311 | 201 | 10 | 154 | 456 | 99 | 398 | 5.33e-24 | 105 |
MS.gene04770.t1 | MTR_1314s0010 | 26.966 | 356 | 218 | 10 | 160 | 493 | 1 | 336 | 1.59e-21 | 96.3 |
MS.gene04770.t1 | MTR_2g097950 | 26.105 | 475 | 268 | 18 | 56 | 502 | 14 | 433 | 2.23e-21 | 97.4 |
MS.gene04770.t1 | MTR_0002s0820 | 43.023 | 86 | 42 | 1 | 222 | 300 | 58 | 143 | 3.86e-12 | 64.7 |
MS.gene04770.t1 | MTR_1g071870 | 65.854 | 41 | 14 | 0 | 445 | 485 | 227 | 267 | 1.90e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04770.t1 | AT3G24503 | 66.866 | 501 | 165 | 1 | 4 | 503 | 1 | 501 | 0.0 | 717 |
MS.gene04770.t1 | AT3G48000 | 54.752 | 484 | 219 | 0 | 20 | 503 | 55 | 538 | 0.0 | 562 |
MS.gene04770.t1 | AT1G23800 | 54.339 | 484 | 221 | 0 | 20 | 503 | 51 | 534 | 0.0 | 557 |
MS.gene04770.t1 | AT3G48170 | 40.162 | 493 | 284 | 5 | 19 | 502 | 4 | 494 | 9.90e-128 | 381 |
MS.gene04770.t1 | AT1G23800 | 52.299 | 348 | 154 | 3 | 20 | 359 | 51 | 394 | 1.20e-121 | 362 |
MS.gene04770.t1 | AT1G74920 | 38.990 | 495 | 288 | 6 | 17 | 502 | 5 | 494 | 2.76e-121 | 365 |
MS.gene04770.t1 | AT1G74920 | 39.394 | 495 | 281 | 7 | 17 | 502 | 5 | 489 | 5.74e-120 | 361 |
MS.gene04770.t1 | AT1G79440 | 37.234 | 470 | 290 | 4 | 26 | 494 | 56 | 521 | 1.22e-97 | 305 |
MS.gene04770.t1 | AT2G14170 | 32.848 | 481 | 299 | 11 | 26 | 493 | 8 | 477 | 4.07e-60 | 206 |
MS.gene04770.t1 | AT2G14170 | 32.604 | 503 | 311 | 13 | 6 | 494 | 99 | 587 | 1.20e-59 | 207 |
MS.gene04770.t1 | AT2G14170 | 33.917 | 457 | 287 | 9 | 6 | 456 | 99 | 546 | 4.22e-59 | 205 |
MS.gene04770.t1 | AT3G66658 | 29.175 | 473 | 315 | 9 | 36 | 494 | 62 | 528 | 5.19e-57 | 199 |
MS.gene04770.t1 | AT3G66658 | 29.175 | 473 | 315 | 9 | 36 | 494 | 62 | 528 | 7.51e-57 | 199 |
MS.gene04770.t1 | AT1G54100 | 29.079 | 478 | 310 | 14 | 36 | 498 | 32 | 495 | 4.51e-55 | 192 |
MS.gene04770.t1 | AT1G54100 | 29.079 | 478 | 310 | 14 | 36 | 498 | 32 | 495 | 4.51e-55 | 192 |
MS.gene04770.t1 | AT2G24270 | 28.827 | 503 | 306 | 12 | 24 | 499 | 17 | 494 | 5.93e-55 | 192 |
MS.gene04770.t1 | AT2G24270 | 28.827 | 503 | 306 | 12 | 24 | 499 | 17 | 494 | 5.93e-55 | 192 |
MS.gene04770.t1 | AT2G24270 | 28.827 | 503 | 306 | 12 | 24 | 499 | 17 | 494 | 6.36e-55 | 192 |
MS.gene04770.t1 | AT2G24270 | 28.827 | 503 | 306 | 12 | 24 | 499 | 57 | 534 | 1.65e-54 | 192 |
MS.gene04770.t1 | AT1G44170 | 27.358 | 424 | 280 | 13 | 66 | 476 | 16 | 424 | 6.30e-29 | 119 |
MS.gene04770.t1 | AT1G44170 | 27.358 | 424 | 280 | 13 | 66 | 476 | 16 | 424 | 6.30e-29 | 119 |
MS.gene04770.t1 | AT1G44170 | 29.814 | 322 | 214 | 9 | 159 | 476 | 48 | 361 | 9.62e-29 | 118 |
MS.gene04770.t1 | AT4G36250 | 25.607 | 453 | 310 | 14 | 56 | 494 | 2 | 441 | 1.28e-25 | 110 |
MS.gene04770.t1 | AT4G34240 | 29.179 | 329 | 217 | 9 | 154 | 476 | 27 | 345 | 3.94e-22 | 99.0 |
MS.gene04770.t1 | AT4G34240 | 29.179 | 329 | 217 | 9 | 154 | 476 | 154 | 472 | 1.07e-21 | 98.6 |
MS.gene04770.t1 | AT4G34240 | 29.518 | 332 | 212 | 11 | 154 | 476 | 169 | 487 | 1.21e-21 | 98.6 |
Find 129 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATCTTCAGGTCAGCTTTAC+AGG | 0.144622 | 4.2:-2079586 | MS.gene04770:intron |
AGCTGTTGACCTTGCTCTTT+TGG | 0.204757 | 4.2:-2079443 | MS.gene04770:CDS |
CCATCCGTGCAGGCGTTATT+TGG | 0.211828 | 4.2:-2078269 | MS.gene04770:CDS |
AAACATGTTTCACTTGAATT+AGG | 0.221275 | 4.2:-2079511 | MS.gene04770:CDS |
GCAATCACATCTCCTGTTCT+TGG | 0.224759 | 4.2:+2081622 | None:intergenic |
GGTATTGTTGGCACTCTTAA+TGG | 0.226974 | 4.2:+2078356 | None:intergenic |
ATAGCACAGGATGAAATATT+TGG | 0.239702 | 4.2:-2078516 | MS.gene04770:CDS |
CAAAATGAACCTTGTTAGTT+AGG | 0.270203 | 4.2:+2079416 | None:intergenic |
GTTTGCAATATCCAAGTTCT+TGG | 0.295408 | 4.2:+2078305 | None:intergenic |
GCACGTGAAGCATTTGATTC+AGG | 0.298318 | 4.2:-2081550 | MS.gene04770:CDS |
GGAGCTGTTGTCCCCATTAC+TGG | 0.309311 | 4.2:+2083227 | None:intergenic |
GGATATAAAATGAGTGGATT+TGG | 0.311802 | 4.2:-2078204 | MS.gene04770:CDS |
TGGGAAAATAATGATGAAAT+TGG | 0.313991 | 4.2:-2081250 | MS.gene04770:CDS |
TCTCTTTCCATGCTCAATAT+AGG | 0.329646 | 4.2:+2078750 | None:intergenic |
GCCTGCTGCTAGGCCATATC+TGG | 0.333975 | 4.2:+2078335 | None:intergenic |
TGGATAAACTCTTATCTTGC+CGG | 0.334055 | 4.2:-2078249 | MS.gene04770:CDS |
GAAAGAGGTGTTTGTTCAGC+AGG | 0.348135 | 4.2:+2080925 | None:intergenic |
CTGATCTTAACTCCAGTAAT+GGG | 0.351808 | 4.2:-2083239 | MS.gene04770:CDS |
ACCAGCAGTTGGACCAAATC+CGG | 0.357395 | 4.2:+2080724 | None:intergenic |
GGTCCATGGCCCCGGATGTC+TGG | 0.361847 | 4.2:-2081529 | MS.gene04770:CDS |
GTCAGCCCTTCCTTAGCTGC+TGG | 0.364268 | 4.2:-2080967 | MS.gene04770:CDS |
TGCATACCAGCTTAGCTAGA+TGG | 0.364778 | 4.2:+2080887 | None:intergenic |
GAGTGGATTTGGAAGAGATC+TGG | 0.366600 | 4.2:-2078193 | MS.gene04770:CDS |
GGTCAGGTATTAAAATCTTC+TGG | 0.368777 | 4.2:-2081081 | MS.gene04770:CDS |
CTGCAGCTTGCATTATTTCA+CGG | 0.378514 | 4.2:+2079548 | None:intergenic |
CAATCACATCTCCTGTTCTT+GGG | 0.382551 | 4.2:+2081623 | None:intergenic |
TTTACATTGGAGAAAATTGT+AGG | 0.393711 | 4.2:+2078667 | None:intergenic |
AAGGCAAAAGCCTGGGTCAT+TGG | 0.394324 | 4.2:-2079226 | MS.gene04770:CDS |
ACTACATTCAGCACTCCATT+TGG | 0.395039 | 4.2:+2080749 | None:intergenic |
CTACATTCAGCACTCCATTT+GGG | 0.409277 | 4.2:+2080750 | None:intergenic |
GAAGAGCTTGTTATACTTGA+TGG | 0.409539 | 4.2:+2083188 | None:intergenic |
AGCCAGGGAGAATTGTAAAT+AGG | 0.410531 | 4.2:+2078123 | None:intergenic |
AGTGGATTTGGAAGAGATCT+GGG | 0.423011 | 4.2:-2078192 | MS.gene04770:CDS |
AGGTAGAAGAGTGGGCAGTC+AGG | 0.426583 | 4.2:-2078704 | MS.gene04770:CDS |
AGTGCCAACAATACCAGATA+TGG | 0.435908 | 4.2:-2078348 | MS.gene04770:CDS |
CCAAATAACGCCTGCACGGA+TGG | 0.438781 | 4.2:+2078269 | None:intergenic |
CTGAATGTAGTACCCGGATT+TGG | 0.439245 | 4.2:-2080737 | MS.gene04770:CDS |
AACATACAACACCAGACATC+CGG | 0.439678 | 4.2:+2081518 | None:intergenic |
TAGGCCATATCTGGTATTGT+TGG | 0.452905 | 4.2:+2078344 | None:intergenic |
TGCTGATAAAATTCATGGTC+AGG | 0.454958 | 4.2:-2081097 | MS.gene04770:CDS |
TATAACAAGCTCTTCATCAA+TGG | 0.465405 | 4.2:-2083180 | MS.gene04770:CDS |
TTATGCCCATCTAGCTAAGC+TGG | 0.465946 | 4.2:-2080893 | MS.gene04770:intron |
CCCGTGTGTTTGTTCAGGAA+GGG | 0.470418 | 4.2:-2079282 | MS.gene04770:CDS |
CATGTTTCACTTGAATTAGG+AGG | 0.477018 | 4.2:-2079508 | MS.gene04770:CDS |
AACTTCATTAGTGCCATCAC+AGG | 0.478671 | 4.2:+2078492 | None:intergenic |
ATCATTTCCTATATTGAGCA+TGG | 0.479023 | 4.2:-2078757 | MS.gene04770:CDS |
GGATAAACTCTTATCTTGCC+GGG | 0.487897 | 4.2:-2078248 | MS.gene04770:CDS |
ACCAGATATGGCCTAGCAGC+AGG | 0.488058 | 4.2:-2078336 | MS.gene04770:CDS |
GAAGGAGCTACACTCTTGAC+TGG | 0.489006 | 4.2:-2078727 | MS.gene04770:CDS |
CCCGGATTTGGTCCAACTGC+TGG | 0.491887 | 4.2:-2080725 | MS.gene04770:CDS |
TTGATTCAGGTCCATGGCCC+CGG | 0.492114 | 4.2:-2081537 | MS.gene04770:CDS |
ATATTGCAAACACTGTTTCA+AGG | 0.493347 | 4.2:-2078293 | MS.gene04770:CDS |
TAAAAGGCTGGAATCCCAAA+TGG | 0.494538 | 4.2:-2080764 | MS.gene04770:intron |
CATGGTGCACCCAGCAGCTA+AGG | 0.495373 | 4.2:+2080957 | None:intergenic |
TTTACAGGTTCAGTTGAAGT+AGG | 0.496624 | 4.2:-2079571 | MS.gene04770:CDS |
TAAAACTCAGCAAGGACCTC+AGG | 0.497381 | 4.2:-2079188 | MS.gene04770:intron |
TCCCGTGTGTTTGTTCAGGA+AGG | 0.497846 | 4.2:-2079283 | MS.gene04770:CDS |
ACTGATCTTAACTCCAGTAA+TGG | 0.498657 | 4.2:-2083240 | MS.gene04770:CDS |
ATGTTCCCGTGTGTTTGTTC+AGG | 0.499306 | 4.2:-2079287 | MS.gene04770:CDS |
TCAGCCCTTCCTTAGCTGCT+GGG | 0.499600 | 4.2:-2080966 | MS.gene04770:CDS |
ATGTGTCCCACAACACCAAT+TGG | 0.499649 | 4.2:+2081030 | None:intergenic |
AGGCATTGTGACCAAGAACT+TGG | 0.500232 | 4.2:-2078316 | MS.gene04770:CDS |
ATAATTGATTACCTTTACAT+TGG | 0.501299 | 4.2:+2078654 | None:intergenic |
TGGTCACAATGCCTGCTGCT+AGG | 0.501477 | 4.2:+2078325 | None:intergenic |
TCAGTGTGTATGCATGGAAT+TGG | 0.503568 | 4.2:+2081058 | None:intergenic |
GGTAGAAGAGTGGGCAGTCA+GGG | 0.509367 | 4.2:-2078703 | MS.gene04770:CDS |
AGCTAAGGAAGGGCTGACTT+TGG | 0.509696 | 4.2:+2080972 | None:intergenic |
GAAACAATAGACCCAAGAAC+AGG | 0.512084 | 4.2:-2081634 | MS.gene04770:CDS |
GGAGGACATGCTTATAGCAC+AGG | 0.517349 | 4.2:-2078529 | MS.gene04770:CDS |
GCATACCAGCTTAGCTAGAT+GGG | 0.518386 | 4.2:+2080888 | None:intergenic |
CGTAGGAGACATTCAAAGCC+AGG | 0.518540 | 4.2:+2078107 | None:intergenic |
ATTGTAAATAGGTGTTACAA+TGG | 0.527726 | 4.2:+2078134 | None:intergenic |
ATGGAACCAATTGGTGTTGT+GGG | 0.528798 | 4.2:-2081036 | MS.gene04770:CDS |
ACATACAACACCAGACATCC+GGG | 0.529052 | 4.2:+2081519 | None:intergenic |
TGTGAATAACAGGACTATAG+AGG | 0.530058 | 4.2:-2078382 | MS.gene04770:intron |
AAAAGGAATGTCACTTCCCC+CGG | 0.532323 | 4.2:+2078230 | None:intergenic |
GTTTCAAGGTCCATCCGTGC+AGG | 0.533004 | 4.2:-2078279 | MS.gene04770:CDS |
CACCTATTTACAATTCTCCC+TGG | 0.535841 | 4.2:-2078125 | MS.gene04770:CDS |
ACACCAGACATCCGGGGCCA+TGG | 0.536998 | 4.2:+2081526 | None:intergenic |
ATTGAAGTGGGAGCATTCCA+TGG | 0.540068 | 4.2:+2081003 | None:intergenic |
ACATTAGATGCAATTGATGC+TGG | 0.541154 | 4.2:-2081192 | MS.gene04770:CDS |
GTGCACCCAGCAGCTAAGGA+AGG | 0.541901 | 4.2:+2080961 | None:intergenic |
TTTGGAGGATATAAAATGAG+TGG | 0.544876 | 4.2:-2078210 | MS.gene04770:CDS |
CTTAGCTGCTGGGTGCACCA+TGG | 0.547442 | 4.2:-2080956 | MS.gene04770:CDS |
GGTGCTGCTGATAAAATTCA+TGG | 0.547810 | 4.2:-2081102 | MS.gene04770:CDS |
TGCTGCAATCAGCTCACACA+TGG | 0.551069 | 4.2:-2080702 | MS.gene04770:CDS |
AATACACTACGTTACTATGC+AGG | 0.552179 | 4.2:-2081123 | MS.gene04770:CDS |
AAGCATTTGATTCAGGTCCA+TGG | 0.553105 | 4.2:-2081543 | MS.gene04770:CDS |
TGGTGGAGAAGGCAAAAGCC+TGG | 0.554570 | 4.2:-2079234 | MS.gene04770:CDS |
CGTAGTGTATTTGCTGCTGA+AGG | 0.570626 | 4.2:+2081135 | None:intergenic |
ATTCCATGCATACACACTGA+TGG | 0.571107 | 4.2:-2081055 | MS.gene04770:CDS |
TGAAATATTTGGCCCTGTGA+TGG | 0.571430 | 4.2:-2078505 | MS.gene04770:CDS |
CCAGCAGTTGGACCAAATCC+GGG | 0.571816 | 4.2:+2080725 | None:intergenic |
CTGATTGCAGCACCAGCAGT+TGG | 0.572903 | 4.2:+2080713 | None:intergenic |
TACACACTGATGGAACCAAT+TGG | 0.580643 | 4.2:-2081045 | MS.gene04770:CDS |
AGCTTGTTATACTTGATGGT+CGG | 0.581979 | 4.2:+2083192 | None:intergenic |
TTCAGCAGGTTTGAGAACCA+TGG | 0.586358 | 4.2:+2080939 | None:intergenic |
TTGTGGGACACATCATTCCA+TGG | 0.586369 | 4.2:-2081020 | MS.gene04770:CDS |
GATGGAACCAATTGGTGTTG+TGG | 0.586951 | 4.2:-2081037 | MS.gene04770:CDS |
GCATAAAACAAAGCAGAAAG+AGG | 0.589025 | 4.2:+2080910 | None:intergenic |
ATTGAGCATGGAAAGAGAGA+AGG | 0.590273 | 4.2:-2078745 | MS.gene04770:CDS |
TGCACCCAGCAGCTAAGGAA+GGG | 0.590276 | 4.2:+2080962 | None:intergenic |
TTGACTGGAGGTAGAAGAGT+GGG | 0.591266 | 4.2:-2078712 | MS.gene04770:CDS |
GGTGGAGAAGGCAAAAGCCT+GGG | 0.597440 | 4.2:-2079233 | MS.gene04770:CDS |
TTTGGGTATCCTAACTAACA+AGG | 0.599837 | 4.2:-2079425 | MS.gene04770:intron |
GTTCCATCAGTGTGTATGCA+TGG | 0.603984 | 4.2:+2081052 | None:intergenic |
ATATTAAATATCAGGAACGT+GGG | 0.604582 | 4.2:-2081269 | MS.gene04770:intron |
GATAAACTCTTATCTTGCCG+GGG | 0.605189 | 4.2:-2078247 | MS.gene04770:CDS |
TTTGGTGAAGAAAATTGAAG+TGG | 0.614847 | 4.2:+2080990 | None:intergenic |
AAAAGGATCTCCAATGACCC+AGG | 0.631836 | 4.2:+2079216 | None:intergenic |
TTTGATCCTAAAACTCAGCA+AGG | 0.637108 | 4.2:-2079196 | MS.gene04770:CDS |
TTATCCAAATAACGCCTGCA+CGG | 0.637223 | 4.2:+2078265 | None:intergenic |
ACTTCATTAGTGCCATCACA+GGG | 0.638597 | 4.2:+2078493 | None:intergenic |
TCCCTTCCTGAACAAACACA+CGG | 0.639935 | 4.2:+2079281 | None:intergenic |
AGATGCAATTGATGCTGGCA+AGG | 0.641641 | 4.2:-2081187 | MS.gene04770:CDS |
TTAGGATACCCAAAAGAGCA+AGG | 0.644369 | 4.2:+2079434 | None:intergenic |
TTGGTGAAGAAAATTGAAGT+GGG | 0.651936 | 4.2:+2080991 | None:intergenic |
GATATTAAATATCAGGAACG+TGG | 0.658049 | 4.2:-2081270 | MS.gene04770:intron |
CTTGACTGGAGGTAGAAGAG+TGG | 0.659877 | 4.2:-2078713 | MS.gene04770:CDS |
ATAAACTCTTATCTTGCCGG+GGG | 0.661062 | 4.2:-2078246 | MS.gene04770:CDS |
GTAGGAGACATTCAAAGCCA+GGG | 0.664341 | 4.2:+2078108 | None:intergenic |
TGATCTTAACTCCAGTAATG+GGG | 0.665539 | 4.2:-2083238 | MS.gene04770:CDS |
CCCTTCCTGAACAAACACAC+GGG | 0.676755 | 4.2:+2079282 | None:intergenic |
GGAGTGCTGAATGTAGTACC+CGG | 0.683406 | 4.2:-2080743 | MS.gene04770:CDS |
GCATCATCGAAAATTATGAG+AGG | 0.689690 | 4.2:+2079478 | None:intergenic |
CTCACACATGGACATAGATG+TGG | 0.692327 | 4.2:-2080690 | MS.gene04770:intron |
GTGATTGCAAGAATGAGTGA+AGG | 0.695167 | 4.2:-2081607 | MS.gene04770:CDS |
GGAGCTACACTCTTGACTGG+AGG | 0.701852 | 4.2:-2078724 | MS.gene04770:CDS |
CATACAACACCAGACATCCG+GGG | 0.727771 | 4.2:+2081520 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACAAAATTAACTTAAAAATA+GGG | + | chr4.2:2081117-2081136 | None:intergenic | 10.0% |
!! | TACAAAATTAACTTAAAAAT+AGG | + | chr4.2:2081118-2081137 | None:intergenic | 10.0% |
!!! | AAAATATTGGTATTTTTATA+AGG | + | chr4.2:2081024-2081043 | None:intergenic | 10.0% |
!!! | AACAATATAGTTTTTTTTTT+TGG | - | chr4.2:2081484-2081503 | MS.gene04770:intron | 10.0% |
!!! | AATTATATTTGTATCAATTT+TGG | - | chr4.2:2082725-2082744 | MS.gene04770:intron | 10.0% |
!!! | AGCTATTTTTAAATTATATT+TGG | - | chr4.2:2081683-2081702 | MS.gene04770:intron | 10.0% |
!!! | ATTATATTTGTATCAATTTT+GGG | - | chr4.2:2082726-2082745 | MS.gene04770:intron | 10.0% |
!!! | TTTTTTTTAATGAAGAAAAA+GGG | + | chr4.2:2079615-2079634 | None:intergenic | 10.0% |
!!! | TTTTTTTTTAATGAAGAAAA+AGG | + | chr4.2:2079616-2079635 | None:intergenic | 10.0% |
!! | AAAAAACATTAAAATCTATC+TGG | + | chr4.2:2080531-2080550 | None:intergenic | 15.0% |
!! | AATCTGAAAAATAATTACTA+AGG | - | chr4.2:2081554-2081573 | MS.gene04770:CDS | 15.0% |
!! | CATTAATTTAGATTATTAGA+AGG | + | chr4.2:2080065-2080084 | None:intergenic | 15.0% |
!! | TCAAATCTAATATTTAATCA+CGG | - | chr4.2:2078475-2078494 | MS.gene04770:intron | 15.0% |
!!! | AAAAAGGTTAAATATGTTTT+TGG | + | chr4.2:2081396-2081415 | None:intergenic | 15.0% |
!!! | CACGAATTTAATATTTTTTA+CGG | + | chr4.2:2081171-2081190 | None:intergenic | 15.0% |
!!! | TAACATTGATAATTATTATG+TGG | - | chr4.2:2079676-2079695 | MS.gene04770:intron | 15.0% |
!!! | TAGATTTTAATGTTTTTTTC+TGG | - | chr4.2:2080533-2080552 | MS.gene04770:intron | 15.0% |
!!! | TATATCGACTTTTTATAAAA+AGG | + | chr4.2:2081412-2081431 | None:intergenic | 15.0% |
!!! | TTAATAATTGATTTTAGTGT+GGG | - | chr4.2:2080895-2080914 | MS.gene04770:CDS | 15.0% |
!!! | TTTAATAATTGATTTTAGTG+TGG | - | chr4.2:2080894-2080913 | MS.gene04770:CDS | 15.0% |
!! | AAACATAAAAACAAAGAACT+TGG | + | chr4.2:2079571-2079590 | None:intergenic | 20.0% |
!! | AAATATTACATGACAGTTAT+GGG | + | chr4.2:2078350-2078369 | None:intergenic | 20.0% |
!! | AACATAAAAACAAAGAACTT+GGG | + | chr4.2:2079570-2079589 | None:intergenic | 20.0% |
!! | AATCTCCAAAAAATTATGTA+AGG | + | chr4.2:2078570-2078589 | None:intergenic | 20.0% |
!! | ACAATAATTATGTTTGGATT+TGG | + | chr4.2:2078856-2078875 | None:intergenic | 20.0% |
!! | ATAATTGATTACCTTTACAT+TGG | + | chr4.2:2082711-2082730 | None:intergenic | 20.0% |
!! | ATGAAGTTATTCATAATTCT+TGG | - | chr4.2:2081521-2081540 | MS.gene04770:intron | 20.0% |
!! | TAAATATTACATGACAGTTA+TGG | + | chr4.2:2078351-2078370 | None:intergenic | 20.0% |
!! | TTGAATTGAATAACCTATTT+AGG | - | chr4.2:2082812-2082831 | MS.gene04770:intron | 20.0% |
!! | TTTAATTGACATACCATTTA+GGG | - | chr4.2:2082920-2082939 | MS.gene04770:intron | 20.0% |
!!! | AAATGATTTTTGTTTTGCAA+CGG | + | chr4.2:2080745-2080764 | None:intergenic | 20.0% |
!!! | AAGTTGAAAGAAAATTTTAG+AGG | + | chr4.2:2081056-2081075 | None:intergenic | 20.0% |
!!! | AAGTTGAAGAAATTTTTTAG+AGG | - | chr4.2:2081337-2081356 | MS.gene04770:intron | 20.0% |
!!! | AATTATTATGTGGCTTTTTA+TGG | - | chr4.2:2079686-2079705 | MS.gene04770:intron | 20.0% |
!!! | AGTTGAAAGAAAATTTTAGA+GGG | + | chr4.2:2081055-2081074 | None:intergenic | 20.0% |
!!! | AGTTGAAGAAATTTTTTAGA+GGG | - | chr4.2:2081338-2081357 | MS.gene04770:intron | 20.0% |
!!! | ATAATGGCTTGATTTTATAA+TGG | - | chr4.2:2080980-2080999 | MS.gene04770:CDS | 20.0% |
!!! | ATGAGTTGATATTAAATATC+AGG | - | chr4.2:2080085-2080104 | MS.gene04770:intron | 20.0% |
!!! | ATTTTAATGTTTTTTTCTGG+AGG | - | chr4.2:2080536-2080555 | MS.gene04770:intron | 20.0% |
!!! | ATTTTTGTTTGTGTTCTAAA+AGG | - | chr4.2:2080582-2080601 | MS.gene04770:intron | 20.0% |
!!! | CATCTCAAATGATTTTATAA+TGG | - | chr4.2:2080964-2080983 | MS.gene04770:CDS | 20.0% |
!!! | GATAATAGTTAACTTTGTTT+CGG | - | chr4.2:2078750-2078769 | MS.gene04770:CDS | 20.0% |
!!! | TAATGGCTTGATTTTATAAT+GGG | - | chr4.2:2080981-2081000 | MS.gene04770:CDS | 20.0% |
!!! | TTAATTGAGAATTCTAGTTT+TGG | - | chr4.2:2079308-2079327 | MS.gene04770:intron | 20.0% |
!!! | TTTTAATTGACATACCATTT+AGG | - | chr4.2:2082919-2082938 | MS.gene04770:intron | 20.0% |
!!! | TTTTCAATCACTACTTTTTT+TGG | - | chr4.2:2081090-2081109 | MS.gene04770:CDS | 20.0% |
! | AAACATGTTTCACTTGAATT+AGG | - | chr4.2:2081851-2081870 | MS.gene04770:intron | 25.0% |
! | AACAAAAATCATTTGACCAA+CGG | - | chr4.2:2080751-2080770 | MS.gene04770:CDS | 25.0% |
! | AATAATTACTAAGGAACAAG+AGG | - | chr4.2:2081563-2081582 | MS.gene04770:CDS | 25.0% |
! | AATTGAATAACCTATTTAGG+AGG | - | chr4.2:2082815-2082834 | MS.gene04770:intron | 25.0% |
! | ACATAAAAACAAAGAACTTG+GGG | + | chr4.2:2079569-2079588 | None:intergenic | 25.0% |
! | AGAGTACGTAGAAATAAAAA+AGG | + | chr4.2:2078252-2078271 | None:intergenic | 25.0% |
! | ATATTAAATATCAGGAACGT+GGG | - | chr4.2:2080093-2080112 | MS.gene04770:intron | 25.0% |
! | ATCTGGTCTATGAAAATTAA+AGG | + | chr4.2:2080514-2080533 | None:intergenic | 25.0% |
! | ATTGACATTAATCTTAAGTC+AGG | - | chr4.2:2079966-2079985 | MS.gene04770:intron | 25.0% |
! | CCAAAAAATTATGTAAGGTA+AGG | + | chr4.2:2078565-2078584 | None:intergenic | 25.0% |
! | GAAGCTTAGAAATCAAATAT+TGG | + | chr4.2:2082026-2082045 | None:intergenic | 25.0% |
! | GAGGGATTAAAACAAAATAT+TGG | + | chr4.2:2081037-2081056 | None:intergenic | 25.0% |
! | GTAGTGATTGAAAATTCTAT+AGG | + | chr4.2:2081084-2081103 | None:intergenic | 25.0% |
! | TAAAAGGAAAGAAAACATGA+TGG | + | chr4.2:2082778-2082797 | None:intergenic | 25.0% |
! | TATGAATTTAGCATGTGTAT+TGG | + | chr4.2:2078298-2078317 | None:intergenic | 25.0% |
! | TCATTAGTTGATTACAAACT+TGG | + | chr4.2:2081720-2081739 | None:intergenic | 25.0% |
! | TGAAGATGGAAAATATTTGA+AGG | - | chr4.2:2081309-2081328 | MS.gene04770:intron | 25.0% |
! | TGGGAAAATAATGATGAAAT+TGG | - | chr4.2:2080112-2080131 | MS.gene04770:intron | 25.0% |
! | TTAATTGACATACCATTTAG+GGG | - | chr4.2:2082921-2082940 | MS.gene04770:intron | 25.0% |
! | TTATATGAAAATTGCTCTTC+AGG | - | chr4.2:2080703-2080722 | MS.gene04770:CDS | 25.0% |
! | TTGACATTAATCTTAAGTCA+GGG | - | chr4.2:2079967-2079986 | MS.gene04770:intron | 25.0% |
! | TTGTCTATAACGACTTATTT+AGG | - | chr4.2:2079366-2079385 | MS.gene04770:intron | 25.0% |
! | TTTACATTGGAGAAAATTGT+AGG | + | chr4.2:2082698-2082717 | None:intergenic | 25.0% |
!! | AAAGTGTCTTAAGTCAATAA+AGG | + | chr4.2:2078800-2078819 | None:intergenic | 25.0% |
!! | AACGTTTTTGATGAGATAAA+AGG | + | chr4.2:2082794-2082813 | None:intergenic | 25.0% |
!! | ATTGTAAATAGGTGTTACAA+TGG | + | chr4.2:2083231-2083250 | None:intergenic | 25.0% |
!! | CAAATTTGTTTGGTTATATG+AGG | - | chr4.2:2078881-2078900 | MS.gene04770:intron | 25.0% |
!! | CTTTGTAAGGAAAAGATTTT+CGG | + | chr4.2:2081976-2081995 | None:intergenic | 25.0% |
!! | TACAATTTTCTCCAATGTAA+AGG | - | chr4.2:2082697-2082716 | MS.gene04770:intron | 25.0% |
!! | TTTATGTTTTCCTCTATGTT+AGG | - | chr4.2:2079582-2079601 | MS.gene04770:intron | 25.0% |
!!! | AAAATACATTTTAAGACCCA+AGG | - | chr4.2:2079391-2079410 | MS.gene04770:intron | 25.0% |
!!! | AAATTAAAGGTACTGATCTA+AGG | + | chr4.2:2080501-2080520 | None:intergenic | 25.0% |
!!! | AGGAAATGATTTTTTCGAAT+TGG | + | chr4.2:2082595-2082614 | None:intergenic | 25.0% |
!!! | ATGGTGGATTAATTTAAGTA+TGG | - | chr4.2:2082955-2082974 | MS.gene04770:intron | 25.0% |
!!! | ATTTTGGGTATCTTTATCAT+AGG | - | chr4.2:2082741-2082760 | MS.gene04770:intron | 25.0% |
!!! | CCTTACCTTACATAATTTTT+TGG | - | chr4.2:2078562-2078581 | MS.gene04770:intron | 25.0% |
!!! | CTCTAAGAATTTTTGTTAAG+AGG | - | chr4.2:2078268-2078287 | MS.gene04770:CDS | 25.0% |
!!! | TAAAAGAGTTACTTGCTTTT+CGG | + | chr4.2:2079206-2079225 | None:intergenic | 25.0% |
!!! | TGGTGGATTAATTTAAGTAT+GGG | - | chr4.2:2082956-2082975 | MS.gene04770:intron | 25.0% |
AACCAATGTTCAATACAAGA+AGG | + | chr4.2:2078723-2078742 | None:intergenic | 30.0% | |
ACATGAGTTTACTTCAAAAG+AGG | - | chr4.2:2081277-2081296 | MS.gene04770:intron | 30.0% | |
ACCTGAAGATACAAAATCAA+AGG | + | chr4.2:2081767-2081786 | None:intergenic | 30.0% | |
AGAAGTAACCAATTAGACTT+CGG | - | chr4.2:2081629-2081648 | MS.gene04770:CDS | 30.0% | |
AGGAAAAAGAAAAGAAAAGC+AGG | - | chr4.2:2078901-2078920 | MS.gene04770:intron | 30.0% | |
ATAGCACAGGATGAAATATT+TGG | - | chr4.2:2082846-2082865 | MS.gene04770:intron | 30.0% | |
ATATGTACCGTACTATTCTT+GGG | + | chr4.2:2078833-2078852 | None:intergenic | 30.0% | |
ATATTGCAAACACTGTTTCA+AGG | - | chr4.2:2083069-2083088 | MS.gene04770:intron | 30.0% | |
ATCATTTCCTATATTGAGCA+TGG | - | chr4.2:2082605-2082624 | MS.gene04770:intron | 30.0% | |
ATCCTTCTTGTATTGAACAT+TGG | - | chr4.2:2078718-2078737 | MS.gene04770:CDS | 30.0% | |
ATGCAAGACATTCACAAAAA+TGG | - | chr4.2:2082328-2082347 | MS.gene04770:intron | 30.0% | |
ATTTGTGAACTAAGAAAGTG+AGG | + | chr4.2:2082450-2082469 | None:intergenic | 30.0% | |
CAAAATGAACCTTGTTAGTT+AGG | + | chr4.2:2081949-2081968 | None:intergenic | 30.0% | |
CAGGTAAGGTCAATATATAA+TGG | - | chr4.2:2082193-2082212 | MS.gene04770:intron | 30.0% | |
CATGAGTTTACTTCAAAAGA+GGG | - | chr4.2:2081278-2081297 | MS.gene04770:intron | 30.0% | |
CCTGAAGATACAAAATCAAA+GGG | + | chr4.2:2081766-2081785 | None:intergenic | 30.0% | |
GATATTAAATATCAGGAACG+TGG | - | chr4.2:2080092-2080111 | MS.gene04770:intron | 30.0% | |
GCGACAACAATAATTATGTT+TGG | + | chr4.2:2078862-2078881 | None:intergenic | 30.0% | |
TACGTCCTTAATCCTTATAA+AGG | - | chr4.2:2078934-2078953 | MS.gene04770:intron | 30.0% | |
TATAACAAGCTCTTCATCAA+TGG | - | chr4.2:2078182-2078201 | MS.gene04770:CDS | 30.0% | |
TGTGTCCTTTATAAGGATTA+AGG | + | chr4.2:2078942-2078961 | None:intergenic | 30.0% | |
TTATATATTGACCTTACCTG+AGG | + | chr4.2:2082193-2082212 | None:intergenic | 30.0% | |
TTGGTGAAGAAAATTGAAGT+GGG | + | chr4.2:2080374-2080393 | None:intergenic | 30.0% | |
TTTGGAGGATATAAAATGAG+TGG | - | chr4.2:2083152-2083171 | MS.gene04770:intron | 30.0% | |
TTTGGTGAAGAAAATTGAAG+TGG | + | chr4.2:2080375-2080394 | None:intergenic | 30.0% | |
! | ATTGTTGTCGCAAATTTGTT+TGG | - | chr4.2:2078871-2078890 | MS.gene04770:intron | 30.0% |
! | CCTTTCTAGAGAATATGATA+GGG | - | chr4.2:2079079-2079098 | MS.gene04770:intron | 30.0% |
! | CTCATTTTATATCCTCCAAA+AGG | + | chr4.2:2083152-2083171 | None:intergenic | 30.0% |
! | GGATATAAAATGAGTGGATT+TGG | - | chr4.2:2083158-2083177 | MS.gene04770:CDS | 30.0% |
! | GTGGCTTTTTATGGAAAATT+AGG | - | chr4.2:2079695-2079714 | MS.gene04770:intron | 30.0% |
! | TCCTTTCTAGAGAATATGAT+AGG | - | chr4.2:2079078-2079097 | MS.gene04770:intron | 30.0% |
! | TGGTAACAGTTTTCTATTGT+AGG | - | chr4.2:2082559-2082578 | MS.gene04770:intron | 30.0% |
!!! | CTAAGCTTCTTGTTTTTGTA+GGG | - | chr4.2:2082037-2082056 | MS.gene04770:intron | 30.0% |
!!! | TCTAAGCTTCTTGTTTTTGT+AGG | - | chr4.2:2082036-2082055 | MS.gene04770:intron | 30.0% |
AAGTATGGGATGTGAATAAC+AGG | - | chr4.2:2082970-2082989 | MS.gene04770:intron | 35.0% | |
AATACACTACGTTACTATGC+AGG | - | chr4.2:2080239-2080258 | MS.gene04770:intron | 35.0% | |
ACATTAGATGCAATTGATGC+TGG | - | chr4.2:2080170-2080189 | MS.gene04770:intron | 35.0% | |
ACTGATCTTAACTCCAGTAA+TGG | - | chr4.2:2078122-2078141 | MS.gene04770:CDS | 35.0% | |
ATAAGCATGTCCTCCTAAAT+AGG | + | chr4.2:2082828-2082847 | None:intergenic | 35.0% | |
ATACCATCACTCTCTGTATT+CGG | - | chr4.2:2080790-2080809 | MS.gene04770:intron | 35.0% | |
ATGTTCGCTTGTTTAGAAAG+CGG | + | chr4.2:2078632-2078651 | None:intergenic | 35.0% | |
CATGTTTCACTTGAATTAGG+AGG | - | chr4.2:2081854-2081873 | MS.gene04770:intron | 35.0% | |
CTGATCTTAACTCCAGTAAT+GGG | - | chr4.2:2078123-2078142 | MS.gene04770:CDS | 35.0% | |
GAAAACTGAAACTATGCATG+TGG | + | chr4.2:2080926-2080945 | None:intergenic | 35.0% | |
GATATGTACCGTACTATTCT+TGG | + | chr4.2:2078834-2078853 | None:intergenic | 35.0% | |
GCATAAAACAAAGCAGAAAG+AGG | + | chr4.2:2080455-2080474 | None:intergenic | 35.0% | |
GCATCATCGAAAATTATGAG+AGG | + | chr4.2:2081887-2081906 | None:intergenic | 35.0% | |
GGTCAGGTATTAAAATCTTC+TGG | - | chr4.2:2080281-2080300 | MS.gene04770:intron | 35.0% | |
GTTTGCAATATCCAAGTTCT+TGG | + | chr4.2:2083060-2083079 | None:intergenic | 35.0% | |
TATGTACCGTACTATTCTTG+GGG | + | chr4.2:2078832-2078851 | None:intergenic | 35.0% | |
TCTCTTTCCATGCTCAATAT+AGG | + | chr4.2:2082615-2082634 | None:intergenic | 35.0% | |
TGATCTTAACTCCAGTAATG+GGG | - | chr4.2:2078124-2078143 | MS.gene04770:CDS | 35.0% | |
TGCTGATAAAATTCATGGTC+AGG | - | chr4.2:2080265-2080284 | MS.gene04770:intron | 35.0% | |
TGGATAAACTCTTATCTTGC+CGG | - | chr4.2:2083113-2083132 | MS.gene04770:intron | 35.0% | |
TGTAATCTCTAGTATGTTCG+AGG | - | chr4.2:2079130-2079149 | MS.gene04770:intron | 35.0% | |
TGTATGATGGCCATAATCAT+GGG | + | chr4.2:2081593-2081612 | None:intergenic | 35.0% | |
TGTGAATAACAGGACTATAG+AGG | - | chr4.2:2082980-2082999 | MS.gene04770:intron | 35.0% | |
TTGTATGATGGCCATAATCA+TGG | + | chr4.2:2081594-2081613 | None:intergenic | 35.0% | |
TTTACAGGTTCAGTTGAAGT+AGG | - | chr4.2:2081791-2081810 | MS.gene04770:intron | 35.0% | |
TTTGATCCTAAAACTCAGCA+AGG | - | chr4.2:2082166-2082185 | MS.gene04770:intron | 35.0% | |
TTTGGGTATCCTAACTAACA+AGG | - | chr4.2:2081937-2081956 | MS.gene04770:intron | 35.0% | |
! | CAAGTTGAATACTTTCTGAC+AGG | + | chr4.2:2082306-2082325 | None:intergenic | 35.0% |
! | CCCTATCATATTCTCTAGAA+AGG | + | chr4.2:2079082-2079101 | None:intergenic | 35.0% |
! | GTAAGGAAAAGATTTTCGGA+AGG | + | chr4.2:2081972-2081991 | None:intergenic | 35.0% |
! | GTTTTCTATTGTAGGCTGAT+AGG | - | chr4.2:2082567-2082586 | MS.gene04770:intron | 35.0% |
!! | AGCCATGTTGGCTTATTTAA+CGG | - | chr4.2:2079535-2079554 | MS.gene04770:CDS | 35.0% |
!! | AGCTTGTTATACTTGATGGT+CGG | + | chr4.2:2078173-2078192 | None:intergenic | 35.0% |
!! | CCCTTTGATTTTGTATCTTC+AGG | - | chr4.2:2081763-2081782 | MS.gene04770:intron | 35.0% |
!! | CGATCAAGTTGAGAAAAAGT+TGG | - | chr4.2:2082108-2082127 | MS.gene04770:intron | 35.0% |
!! | CTGTCAGAAAGTATTCAACT+TGG | - | chr4.2:2082304-2082323 | MS.gene04770:intron | 35.0% |
!! | GAAGAGCTTGTTATACTTGA+TGG | + | chr4.2:2078177-2078196 | None:intergenic | 35.0% |
!! | TCAAGTTGAGAAAAAGTTGG+TGG | - | chr4.2:2082111-2082130 | MS.gene04770:intron | 35.0% |
!! | TTGTTTGTGTTCTAAAAGGC+TGG | - | chr4.2:2080586-2080605 | MS.gene04770:intron | 35.0% |
!!! | ACATTTTAAGACCCAAGGAA+TGG | - | chr4.2:2079396-2079415 | MS.gene04770:intron | 35.0% |
!!! | GATTTTGTCGATTCTGTATC+AGG | - | chr4.2:2078206-2078225 | MS.gene04770:CDS | 35.0% |
!!! | GGTGGTGGGTTTTTATATTT+TGG | + | chr4.2:2078611-2078630 | None:intergenic | 35.0% |
!!! | TGCTGAGTTTTAGGATCAAA+AGG | + | chr4.2:2082166-2082185 | None:intergenic | 35.0% |
AAATAAGGACCCTACTAGGT+TGG | - | chr4.2:2082534-2082553 | MS.gene04770:intron | 40.0% | |
AACAAGCCCCAAGAATAGTA+CGG | - | chr4.2:2078823-2078842 | MS.gene04770:intron | 40.0% | |
AACATACAACACCAGACATC+CGG | + | chr4.2:2079847-2079866 | None:intergenic | 40.0% | |
AACTTCATTAGTGCCATCAC+AGG | + | chr4.2:2082873-2082892 | None:intergenic | 40.0% | |
AAGACACTCCGAAGTCTAAT+TGG | + | chr4.2:2081640-2081659 | None:intergenic | 40.0% | |
AAGAGATGAGATGCTCACTA+AGG | - | chr4.2:2078445-2078464 | MS.gene04770:intron | 40.0% | |
AAGCATTTGATTCAGGTCCA+TGG | - | chr4.2:2079819-2079838 | MS.gene04770:intron | 40.0% | |
AATTAGACAAGTGTGTCTGC+AGG | + | chr4.2:2080874-2080893 | None:intergenic | 40.0% | |
ACAGTGACTAATCCATTCCT+TGG | + | chr4.2:2079411-2079430 | None:intergenic | 40.0% | |
ACTACATTCAGCACTCCATT+TGG | + | chr4.2:2080616-2080635 | None:intergenic | 40.0% | |
ACTTCATTAGTGCCATCACA+GGG | + | chr4.2:2082872-2082891 | None:intergenic | 40.0% | |
AGCCAGGGAGAATTGTAAAT+AGG | + | chr4.2:2083242-2083261 | None:intergenic | 40.0% | |
AGTGCCAACAATACCAGATA+TGG | - | chr4.2:2083014-2083033 | MS.gene04770:intron | 40.0% | |
ATAAACTCTTATCTTGCCGG+GGG | - | chr4.2:2083116-2083135 | MS.gene04770:intron | 40.0% | |
ATAGGCTCATAGCATTAGCA+TGG | + | chr4.2:2082426-2082445 | None:intergenic | 40.0% | |
ATTCCATGCATACACACTGA+TGG | - | chr4.2:2080307-2080326 | MS.gene04770:intron | 40.0% | |
ATTGAGCATGGAAAGAGAGA+AGG | - | chr4.2:2082617-2082636 | MS.gene04770:intron | 40.0% | |
CAACATGGCTTGAGTATACT+TGG | + | chr4.2:2079525-2079544 | None:intergenic | 40.0% | |
CAAGTATACTCAAGCCATGT+TGG | - | chr4.2:2079523-2079542 | MS.gene04770:CDS | 40.0% | |
CAATCACATCTCCTGTTCTT+GGG | + | chr4.2:2079742-2079761 | None:intergenic | 40.0% | |
CACCTATTTACAATTCTCCC+TGG | - | chr4.2:2083237-2083256 | MS.gene04770:CDS | 40.0% | |
CAGTGACTAATCCATTCCTT+GGG | + | chr4.2:2079410-2079429 | None:intergenic | 40.0% | |
CCTTATAAAGGACACACCAT+GGG | - | chr4.2:2078946-2078965 | MS.gene04770:intron | 40.0% | |
CTACATTCAGCACTCCATTT+GGG | + | chr4.2:2080615-2080634 | None:intergenic | 40.0% | |
CTGCAGCTTGCATTATTTCA+CGG | + | chr4.2:2081817-2081836 | None:intergenic | 40.0% | |
CTTGAAGAAGCCGTCAAATA+AGG | - | chr4.2:2082519-2082538 | MS.gene04770:intron | 40.0% | |
GAAACAATAGACCCAAGAAC+AGG | - | chr4.2:2079728-2079747 | MS.gene04770:intron | 40.0% | |
GAACTAAGAAAGTGAGGCAT+AGG | + | chr4.2:2082444-2082463 | None:intergenic | 40.0% | |
GATAAACTCTTATCTTGCCG+GGG | - | chr4.2:2083115-2083134 | MS.gene04770:intron | 40.0% | |
GCTACACAACAATATAGCAG+AGG | + | chr4.2:2082004-2082023 | None:intergenic | 40.0% | |
GCTTTCTAAACAAGCGAACA+TGG | - | chr4.2:2078631-2078650 | MS.gene04770:intron | 40.0% | |
GGATAAACTCTTATCTTGCC+GGG | - | chr4.2:2083114-2083133 | MS.gene04770:intron | 40.0% | |
GGTATTGTTGGCACTCTTAA+TGG | + | chr4.2:2083009-2083028 | None:intergenic | 40.0% | |
GTGATTGCAAGAATGAGTGA+AGG | - | chr4.2:2079755-2079774 | MS.gene04770:intron | 40.0% | |
TAAAAGGCTGGAATCCCAAA+TGG | - | chr4.2:2080598-2080617 | MS.gene04770:intron | 40.0% | |
TACACACTGATGGAACCAAT+TGG | - | chr4.2:2080317-2080336 | MS.gene04770:intron | 40.0% | |
TAGGCCATATCTGGTATTGT+TGG | + | chr4.2:2083021-2083040 | None:intergenic | 40.0% | |
TATCCGAATACAGAGAGTGA+TGG | + | chr4.2:2080796-2080815 | None:intergenic | 40.0% | |
TATCTTCAGGTCAGCTTTAC+AGG | - | chr4.2:2081776-2081795 | MS.gene04770:intron | 40.0% | |
TCAAGAGTTATTGGATCTGG+TGG | + | chr4.2:2078501-2078520 | None:intergenic | 40.0% | |
TCAGTGTGTATGCATGGAAT+TGG | + | chr4.2:2080307-2080326 | None:intergenic | 40.0% | |
TCCTTATAAAGGACACACCA+TGG | - | chr4.2:2078945-2078964 | MS.gene04770:intron | 40.0% | |
TGAAATATTTGGCCCTGTGA+TGG | - | chr4.2:2082857-2082876 | MS.gene04770:intron | 40.0% | |
TGCTCAAGAGTTATTGGATC+TGG | + | chr4.2:2078504-2078523 | None:intergenic | 40.0% | |
TGGTTGCTCATAGTTTAGCT+AGG | - | chr4.2:2078651-2078670 | MS.gene04770:intron | 40.0% | |
TTAGGATACCCAAAAGAGCA+AGG | + | chr4.2:2081931-2081950 | None:intergenic | 40.0% | |
TTATCCAAATAACGCCTGCA+CGG | + | chr4.2:2083100-2083119 | None:intergenic | 40.0% | |
TTCTCGTGCTCAAGAGTTAT+TGG | + | chr4.2:2078510-2078529 | None:intergenic | 40.0% | |
! | AATTAGACTTCGGAGTGTCT+TGG | - | chr4.2:2081639-2081658 | MS.gene04770:CDS | 40.0% |
! | AGTGGATTTGGAAGAGATCT+GGG | - | chr4.2:2083170-2083189 | MS.gene04770:CDS | 40.0% |
! | CAAATAGTCACTTTAGTCCC+TGG | - | chr4.2:2079898-2079917 | MS.gene04770:intron | 40.0% |
! | CTAGTAGGGTCCTTATTTGA+CGG | + | chr4.2:2082532-2082551 | None:intergenic | 40.0% |
! | GAACAATACTTAAGTGCCGT+TGG | + | chr4.2:2080770-2080789 | None:intergenic | 40.0% |
!! | ATGGAACCAATTGGTGTTGT+GGG | - | chr4.2:2080326-2080345 | MS.gene04770:intron | 40.0% |
!! | CCATGTTGGCTTATTTAACG+GGG | - | chr4.2:2079537-2079556 | MS.gene04770:CDS | 40.0% |
!! | GCCATGTTGGCTTATTTAAC+GGG | - | chr4.2:2079536-2079555 | MS.gene04770:CDS | 40.0% |
!! | GGTGCTGCTGATAAAATTCA+TGG | - | chr4.2:2080260-2080279 | MS.gene04770:intron | 40.0% |
!! | TGAGAAAAAGTTGGTGGAGA+AGG | - | chr4.2:2082117-2082136 | MS.gene04770:intron | 40.0% |
AAAAGAGCTGAGGATGAGCT+AGG | - | chr4.2:2078977-2078996 | MS.gene04770:intron | 45.0% | |
AAAAGCGAGCCTATGTTCAC+AGG | - | chr4.2:2082273-2082292 | MS.gene04770:intron | 45.0% | |
AAAAGGATCTCCAATGACCC+AGG | + | chr4.2:2082149-2082168 | None:intergenic | 45.0% | |
AAGAGGTCCACCCATGATTA+TGG | - | chr4.2:2081580-2081599 | MS.gene04770:CDS | 45.0% | |
ACATACAACACCAGACATCC+GGG | + | chr4.2:2079846-2079865 | None:intergenic | 45.0% | |
AGAGGGAGCAAAAGTGAAGA+TGG | - | chr4.2:2081295-2081314 | MS.gene04770:intron | 45.0% | |
AGATGCAATTGATGCTGGCA+AGG | - | chr4.2:2080175-2080194 | MS.gene04770:intron | 45.0% | |
AGCAGAGGATGCTCTTTGTA+AGG | + | chr4.2:2081989-2082008 | None:intergenic | 45.0% | |
ATGATGGCCATAATCATGGG+TGG | + | chr4.2:2081590-2081609 | None:intergenic | 45.0% | |
ATGGCCATCATACAAGAGAC+TGG | - | chr4.2:2081599-2081618 | MS.gene04770:CDS | 45.0% | |
ATGTGTCCCACAACACCAAT+TGG | + | chr4.2:2080335-2080354 | None:intergenic | 45.0% | |
ATGTTCCCGTGTGTTTGTTC+AGG | - | chr4.2:2082075-2082094 | MS.gene04770:intron | 45.0% | |
CCCATGGTGTGTCCTTTATA+AGG | + | chr4.2:2078949-2078968 | None:intergenic | 45.0% | |
CCCCGTTAAATAAGCCAACA+TGG | + | chr4.2:2079540-2079559 | None:intergenic | 45.0% | |
CGCATGAAGAGAGTGAAACT+TGG | + | chr4.2:2080839-2080858 | None:intergenic | 45.0% | |
CGTCAAATAAGGACCCTACT+AGG | - | chr4.2:2082530-2082549 | MS.gene04770:intron | 45.0% | |
CTAATGACTGATGACTGCTG+AGG | - | chr4.2:2081733-2081752 | MS.gene04770:intron | 45.0% | |
CTCACACATGGACATAGATG+TGG | - | chr4.2:2080672-2080691 | MS.gene04770:intron | 45.0% | |
CTGAATGTAGTACCCGGATT+TGG | - | chr4.2:2080625-2080644 | MS.gene04770:intron | 45.0% | |
CTTGTTTAGAAAGCGGTGGT+GGG | + | chr4.2:2078625-2078644 | None:intergenic | 45.0% | |
GACGGCTTCTTCAAGCATTT+AGG | + | chr4.2:2082514-2082533 | None:intergenic | 45.0% | |
GCAATCACATCTCCTGTTCT+TGG | + | chr4.2:2079743-2079762 | None:intergenic | 45.0% | |
GCATACCAGCTTAGCTAGAT+GGG | + | chr4.2:2080477-2080496 | None:intergenic | 45.0% | |
GGCATAAGTCAAAAGAGCTG+AGG | - | chr4.2:2078967-2078986 | MS.gene04770:intron | 45.0% | |
GTTACCAAGCCAACCTAGTA+GGG | + | chr4.2:2082546-2082565 | None:intergenic | 45.0% | |
GTTCCATCAGTGTGTATGCA+TGG | + | chr4.2:2080313-2080332 | None:intergenic | 45.0% | |
TAAAACTCAGCAAGGACCTC+AGG | - | chr4.2:2082174-2082193 | MS.gene04770:intron | 45.0% | |
TATGTTCGAGGCTCAGTCTA+AGG | - | chr4.2:2079142-2079161 | MS.gene04770:intron | 45.0% | |
TCCCTTCCTGAACAAACACA+CGG | + | chr4.2:2082084-2082103 | None:intergenic | 45.0% | |
TCTCACAATCATCGAACCAC+AGG | - | chr4.2:2082236-2082255 | MS.gene04770:intron | 45.0% | |
TGCACCAGTCTCTTGTATGA+TGG | + | chr4.2:2081606-2081625 | None:intergenic | 45.0% | |
TGCATACCAGCTTAGCTAGA+TGG | + | chr4.2:2080478-2080497 | None:intergenic | 45.0% | |
TGTCAATGTCGCTGTCACAT+AGG | + | chr4.2:2079953-2079972 | None:intergenic | 45.0% | |
TGTTACCAAGCCAACCTAGT+AGG | + | chr4.2:2082547-2082566 | None:intergenic | 45.0% | |
TTATGCCCATCTAGCTAAGC+TGG | - | chr4.2:2080469-2080488 | MS.gene04770:intron | 45.0% | |
TTCAGCAGGTTTGAGAACCA+TGG | + | chr4.2:2080426-2080445 | None:intergenic | 45.0% | |
TTCATCAACCTGCCCCTAAA+TGG | + | chr4.2:2082936-2082955 | None:intergenic | 45.0% | |
TTCGCTTGTTTAGAAAGCGG+TGG | + | chr4.2:2078629-2078648 | None:intergenic | 45.0% | |
TTGACATACCATTTAGGGGC+AGG | - | chr4.2:2082925-2082944 | MS.gene04770:intron | 45.0% | |
TTGACTGGAGGTAGAAGAGT+GGG | - | chr4.2:2082650-2082669 | MS.gene04770:intron | 45.0% | |
TTGTGGGACACATCATTCCA+TGG | - | chr4.2:2080342-2080361 | MS.gene04770:intron | 45.0% | |
TTTAGCAGGAATTCCACCTG+TGG | + | chr4.2:2082255-2082274 | None:intergenic | 45.0% | |
! | AAAAGGAATGTCACTTCCCC+CGG | + | chr4.2:2083135-2083154 | None:intergenic | 45.0% |
! | AGCTGTTGACCTTGCTCTTT+TGG | - | chr4.2:2081919-2081938 | MS.gene04770:intron | 45.0% |
! | AGGCATTGTGACCAAGAACT+TGG | - | chr4.2:2083046-2083065 | MS.gene04770:intron | 45.0% |
! | CGTAGTGTATTTGCTGCTGA+AGG | + | chr4.2:2080230-2080249 | None:intergenic | 45.0% |
! | GAGTGGATTTGGAAGAGATC+TGG | - | chr4.2:2083169-2083188 | MS.gene04770:CDS | 45.0% |
! | GATGGTCGGCATTTTGAACA+AGG | + | chr4.2:2078159-2078178 | None:intergenic | 45.0% |
! | GCACGTGAAGCATTTGATTC+AGG | - | chr4.2:2079812-2079831 | MS.gene04770:intron | 45.0% |
! | GCTGTTGACCTTGCTCTTTT+GGG | - | chr4.2:2081920-2081939 | MS.gene04770:intron | 45.0% |
! | GGAAGTGACATTCCTTTTGG+AGG | - | chr4.2:2083137-2083156 | MS.gene04770:intron | 45.0% |
! | GTTGGCTTATTTAACGGGGT+AGG | - | chr4.2:2079541-2079560 | MS.gene04770:CDS | 45.0% |
! | TGAGGTCCTTGCTGAGTTTT+AGG | + | chr4.2:2082175-2082194 | None:intergenic | 45.0% |
!! | ATTGAAGTGGGAGCATTCCA+TGG | + | chr4.2:2080362-2080381 | None:intergenic | 45.0% |
!! | GAAAGAGGTGTTTGTTCAGC+AGG | + | chr4.2:2080440-2080459 | None:intergenic | 45.0% |
!! | GATGGAACCAATTGGTGTTG+TGG | - | chr4.2:2080325-2080344 | MS.gene04770:intron | 45.0% |
!! | GGAGTGTCTTGGAGCAATTT+TGG | - | chr4.2:2081650-2081669 | MS.gene04770:intron | 45.0% |
!! | TTTAGGGGCAGGTTGATGAA+TGG | - | chr4.2:2082936-2082955 | MS.gene04770:intron | 45.0% |
!!! | ACATAGGCTCGCTTTTTAGC+AGG | + | chr4.2:2082269-2082288 | None:intergenic | 45.0% |
!!! | GCTCTTTTGACTTATGCCCA+TGG | + | chr4.2:2078965-2078984 | None:intergenic | 45.0% |
!! | ATAAGAATAAAAAAAAAATA+CGG | + | chr4.2:2078700-2078719 | None:intergenic | 5.0% |
AAGGCAAAAGCCTGGGTCAT+TGG | - | chr4.2:2082136-2082155 | MS.gene04770:intron | 50.0% | |
AAGTGTGTCTGCAGGACACT+GGG | + | chr4.2:2080866-2080885 | None:intergenic | 50.0% | |
ACCAGCAGTTGGACCAAATC+CGG | + | chr4.2:2080641-2080660 | None:intergenic | 50.0% | |
AGCTAGGACGTCCTGTTCTT+GGG | - | chr4.2:2078667-2078686 | MS.gene04770:CDS | 50.0% | |
CACAATCATCGAACCACAGG+TGG | - | chr4.2:2082239-2082258 | MS.gene04770:intron | 50.0% | |
CATACAACACCAGACATCCG+GGG | + | chr4.2:2079845-2079864 | None:intergenic | 50.0% | |
CCCGTGTGTTTGTTCAGGAA+GGG | - | chr4.2:2082080-2082099 | MS.gene04770:intron | 50.0% | |
CCCTTCCTGAACAAACACAC+GGG | + | chr4.2:2082083-2082102 | None:intergenic | 50.0% | |
CTAAGGTGGGAGAGCTTGAT+AGG | - | chr4.2:2079159-2079178 | MS.gene04770:intron | 50.0% | |
CTTGACTGGAGGTAGAAGAG+TGG | - | chr4.2:2082649-2082668 | MS.gene04770:intron | 50.0% | |
GAAGGAGCTACACTCTTGAC+TGG | - | chr4.2:2082635-2082654 | MS.gene04770:intron | 50.0% | |
GCTTGATAGGTCTCTCACTG+AGG | - | chr4.2:2079172-2079191 | MS.gene04770:intron | 50.0% | |
GCTTGTTTAGAAAGCGGTGG+TGG | + | chr4.2:2078626-2078645 | None:intergenic | 50.0% | |
GGAGGACATGCTTATAGCAC+AGG | - | chr4.2:2082833-2082852 | MS.gene04770:intron | 50.0% | |
GGGCTTAGAGCCTAACATAG+AGG | + | chr4.2:2079595-2079614 | None:intergenic | 50.0% | |
TAGCTAGGACGTCCTGTTCT+TGG | - | chr4.2:2078666-2078685 | MS.gene04770:CDS | 50.0% | |
TCCCGTGTGTTTGTTCAGGA+AGG | - | chr4.2:2082079-2082098 | MS.gene04770:intron | 50.0% | |
TGCTGCAATCAGCTCACACA+TGG | - | chr4.2:2080660-2080679 | MS.gene04770:intron | 50.0% | |
TTTGCACCTCGCTGTCACAT+AGG | + | chr4.2:2079994-2080013 | None:intergenic | 50.0% | |
! | AGCTAAGGAAGGGCTGACTT+TGG | + | chr4.2:2080393-2080412 | None:intergenic | 50.0% |
! | GGGGGAAGTGACATTCCTTT+TGG | - | chr4.2:2083134-2083153 | MS.gene04770:intron | 50.0% |
! | TTCGAGGCTCAGTCTAAGGT+GGG | - | chr4.2:2079146-2079165 | MS.gene04770:intron | 50.0% |
!! | GGAGTGCTGAATGTAGTACC+CGG | - | chr4.2:2080619-2080638 | MS.gene04770:intron | 50.0% |
ACCAGATATGGCCTAGCAGC+AGG | - | chr4.2:2083026-2083045 | MS.gene04770:intron | 55.0% | |
AGGTAGAAGAGTGGGCAGTC+AGG | - | chr4.2:2082658-2082677 | MS.gene04770:intron | 55.0% | |
CAAGTGTGTCTGCAGGACAC+TGG | + | chr4.2:2080867-2080886 | None:intergenic | 55.0% | |
CACAGCGAGGTGCAAAGTCA+GGG | - | chr4.2:2079926-2079945 | MS.gene04770:intron | 55.0% | |
CCAAATAACGCCTGCACGGA+TGG | + | chr4.2:2083096-2083115 | None:intergenic | 55.0% | |
CCAGCAGTTGGACCAAATCC+GGG | + | chr4.2:2080640-2080659 | None:intergenic | 55.0% | |
CCATCCGTGCAGGCGTTATT+TGG | - | chr4.2:2083093-2083112 | MS.gene04770:intron | 55.0% | |
CTCAGCAAGGACCTCAGGTA+AGG | - | chr4.2:2082179-2082198 | MS.gene04770:intron | 55.0% | |
CTGATTGCAGCACCAGCAGT+TGG | + | chr4.2:2080652-2080671 | None:intergenic | 55.0% | |
GACAGCGAGGTGCAAAGTCA+GGG | - | chr4.2:2079998-2080017 | MS.gene04770:intron | 55.0% | |
GCTGAGGATGAGCTAGGTAG+TGG | - | chr4.2:2078983-2079002 | MS.gene04770:intron | 55.0% | |
GGAGCTACACTCTTGACTGG+AGG | - | chr4.2:2082638-2082657 | MS.gene04770:intron | 55.0% | |
GGAGCTGTTGTCCCCATTAC+TGG | + | chr4.2:2078138-2078157 | None:intergenic | 55.0% | |
GGCTGACAGCCTGTGAACAT+AGG | + | chr4.2:2082285-2082304 | None:intergenic | 55.0% | |
GGTAGAAGAGTGGGCAGTCA+GGG | - | chr4.2:2082659-2082678 | MS.gene04770:intron | 55.0% | |
GGTGGAGAAGGCAAAAGCCT+GGG | - | chr4.2:2082129-2082148 | MS.gene04770:intron | 55.0% | |
GTTCGAGGCTCAGTCTAAGG+TGG | - | chr4.2:2079145-2079164 | MS.gene04770:intron | 55.0% | |
GTTTCAAGGTCCATCCGTGC+AGG | - | chr4.2:2083083-2083102 | MS.gene04770:intron | 55.0% | |
TCAGCCCTTCCTTAGCTGCT+GGG | - | chr4.2:2080396-2080415 | MS.gene04770:intron | 55.0% | |
TGACAGCGAGGTGCAAAGTC+AGG | - | chr4.2:2079997-2080016 | MS.gene04770:intron | 55.0% | |
TGCACCCAGCAGCTAAGGAA+GGG | + | chr4.2:2080403-2080422 | None:intergenic | 55.0% | |
TGGTCACAATGCCTGCTGCT+AGG | + | chr4.2:2083040-2083059 | None:intergenic | 55.0% | |
TGGTGGAGAAGGCAAAAGCC+TGG | - | chr4.2:2082128-2082147 | MS.gene04770:intron | 55.0% | |
TTGATTCAGGTCCATGGCCC+CGG | - | chr4.2:2079825-2079844 | MS.gene04770:intron | 55.0% | |
! | ACGGTGACTAGCCCAAGAAC+AGG | + | chr4.2:2078681-2078700 | None:intergenic | 55.0% |
! | AGGACCCTACTAGGTTGGCT+TGG | - | chr4.2:2082539-2082558 | MS.gene04770:intron | 55.0% |
!! | AGGGGCAGGTTGATGAATGG+TGG | - | chr4.2:2082939-2082958 | MS.gene04770:intron | 55.0% |
CAGGGACCTATGTGACAGCG+AGG | - | chr4.2:2079944-2079963 | MS.gene04770:intron | 60.0% | |
CATGGTGCACCCAGCAGCTA+AGG | + | chr4.2:2080408-2080427 | None:intergenic | 60.0% | |
CTTAGCTGCTGGGTGCACCA+TGG | - | chr4.2:2080406-2080425 | MS.gene04770:intron | 60.0% | |
GCACAGCGAGGTGCAAAGTC+AGG | - | chr4.2:2079925-2079944 | MS.gene04770:intron | 60.0% | |
GCCTGCTGCTAGGCCATATC+TGG | + | chr4.2:2083030-2083049 | None:intergenic | 60.0% | |
GTCAGCCCTTCCTTAGCTGC+TGG | - | chr4.2:2080395-2080414 | MS.gene04770:intron | 60.0% | |
GTGCACCCAGCAGCTAAGGA+AGG | + | chr4.2:2080404-2080423 | None:intergenic | 60.0% | |
! | CCCGGATTTGGTCCAACTGC+TGG | - | chr4.2:2080637-2080656 | MS.gene04770:intron | 60.0% |
ACACCAGACATCCGGGGCCA+TGG | + | chr4.2:2079839-2079858 | None:intergenic | 65.0% | |
CACCTCGCTGTGCAGAGCCA+GGG | + | chr4.2:2079918-2079937 | None:intergenic | 65.0% | |
GCACCTCGCTGTGCAGAGCC+AGG | + | chr4.2:2079919-2079938 | None:intergenic | 70.0% | |
GGTCCATGGCCCCGGATGTC+TGG | - | chr4.2:2079833-2079852 | MS.gene04770:intron | 70.0% | |
!! | GTCCCTGGCTCTGCACAGCG+AGG | - | chr4.2:2079913-2079932 | MS.gene04770:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 2078119 | 2083265 | 2078119 | ID=MS.gene04770 |
chr4.2 | mRNA | 2078119 | 2083265 | 2078119 | ID=MS.gene04770.t1;Parent=MS.gene04770 |
chr4.2 | exon | 2083157 | 2083265 | 2083157 | ID=MS.gene04770.t1.exon1;Parent=MS.gene04770.t1 |
chr4.2 | CDS | 2083157 | 2083265 | 2083157 | ID=cds.MS.gene04770.t1;Parent=MS.gene04770.t1 |
chr4.2 | exon | 2081525 | 2081667 | 2081525 | ID=MS.gene04770.t1.exon2;Parent=MS.gene04770.t1 |
chr4.2 | CDS | 2081525 | 2081667 | 2081525 | ID=cds.MS.gene04770.t1;Parent=MS.gene04770.t1 |
chr4.2 | exon | 2080894 | 2081277 | 2080894 | ID=MS.gene04770.t1.exon3;Parent=MS.gene04770.t1 |
chr4.2 | CDS | 2080894 | 2081277 | 2080894 | ID=cds.MS.gene04770.t1;Parent=MS.gene04770.t1 |
chr4.2 | exon | 2080691 | 2080780 | 2080691 | ID=MS.gene04770.t1.exon4;Parent=MS.gene04770.t1 |
chr4.2 | CDS | 2080691 | 2080780 | 2080691 | ID=cds.MS.gene04770.t1;Parent=MS.gene04770.t1 |
chr4.2 | exon | 2079426 | 2079599 | 2079426 | ID=MS.gene04770.t1.exon5;Parent=MS.gene04770.t1 |
chr4.2 | CDS | 2079426 | 2079599 | 2079426 | ID=cds.MS.gene04770.t1;Parent=MS.gene04770.t1 |
chr4.2 | exon | 2079189 | 2079326 | 2079189 | ID=MS.gene04770.t1.exon6;Parent=MS.gene04770.t1 |
chr4.2 | CDS | 2079189 | 2079326 | 2079189 | ID=cds.MS.gene04770.t1;Parent=MS.gene04770.t1 |
chr4.2 | exon | 2078666 | 2078803 | 2078666 | ID=MS.gene04770.t1.exon7;Parent=MS.gene04770.t1 |
chr4.2 | CDS | 2078666 | 2078803 | 2078666 | ID=cds.MS.gene04770.t1;Parent=MS.gene04770.t1 |
chr4.2 | exon | 2078489 | 2078550 | 2078489 | ID=MS.gene04770.t1.exon8;Parent=MS.gene04770.t1 |
chr4.2 | CDS | 2078489 | 2078550 | 2078489 | ID=cds.MS.gene04770.t1;Parent=MS.gene04770.t1 |
chr4.2 | exon | 2078119 | 2078392 | 2078119 | ID=MS.gene04770.t1.exon9;Parent=MS.gene04770.t1 |
chr4.2 | CDS | 2078119 | 2078392 | 2078119 | ID=cds.MS.gene04770.t1;Parent=MS.gene04770.t1 |
Gene Sequence |
Protein sequence |