Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56929.t1 | RHN63527.1 | 98.3 | 517 | 9 | 0 | 26 | 542 | 28 | 544 | 1.80E-297 | 1031.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56929.t1 | Q9SU63 | 79.1 | 521 | 103 | 2 | 28 | 542 | 18 | 538 | 7.1e-247 | 854.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56929.t1 | A0A396IKR3 | 98.3 | 517 | 9 | 0 | 26 | 542 | 28 | 544 | 1.3e-297 | 1031.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene56929 | 0.801625 | 8.24E-49 | -1.69E-46 |
| MS.gene049907 | MS.gene56929 | 0.819783 | 9.69E-53 | -1.69E-46 |
| MS.gene051255 | MS.gene56929 | 0.800564 | 1.36E-48 | -1.69E-46 |
| MS.gene051360 | MS.gene56929 | 0.851812 | 6.95E-61 | -1.69E-46 |
| MS.gene053169 | MS.gene56929 | 0.832566 | 8.79E-56 | -1.69E-46 |
| MS.gene054556 | MS.gene56929 | 0.823311 | 1.48E-53 | -1.69E-46 |
| MS.gene05492 | MS.gene56929 | 0.801158 | 1.03E-48 | -1.69E-46 |
| MS.gene056902 | MS.gene56929 | 0.822962 | 1.79E-53 | -1.69E-46 |
| MS.gene058700 | MS.gene56929 | 0.80091 | 1.15E-48 | -1.69E-46 |
| MS.gene058948 | MS.gene56929 | 0.819182 | 1.33E-52 | -1.69E-46 |
| MS.gene059680 | MS.gene56929 | 0.801249 | 9.84E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene56929 | 0.824627 | 7.29E-54 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56929.t1 | MTR_4g107040 | 97.426 | 544 | 12 | 1 | 1 | 542 | 1 | 544 | 0.0 | 1091 |
| MS.gene56929.t1 | MTR_3g078170 | 80.996 | 542 | 103 | 0 | 1 | 542 | 1 | 542 | 0.0 | 931 |
| MS.gene56929.t1 | MTR_8g064170 | 80.119 | 503 | 99 | 1 | 41 | 542 | 39 | 541 | 0.0 | 868 |
| MS.gene56929.t1 | MTR_8g064170 | 74.751 | 503 | 94 | 2 | 41 | 542 | 39 | 509 | 0.0 | 800 |
| MS.gene56929.t1 | MTR_3g078170 | 79.075 | 454 | 95 | 0 | 1 | 454 | 1 | 454 | 0.0 | 762 |
| MS.gene56929.t1 | MTR_3g078170 | 78.654 | 431 | 92 | 0 | 1 | 431 | 1 | 431 | 0.0 | 720 |
| MS.gene56929.t1 | MTR_3g078170 | 78.341 | 434 | 94 | 0 | 1 | 434 | 1 | 434 | 0.0 | 719 |
| MS.gene56929.t1 | MTR_6g086300 | 57.320 | 485 | 207 | 0 | 58 | 542 | 18 | 502 | 0.0 | 579 |
| MS.gene56929.t1 | MTR_6g086300 | 57.320 | 485 | 207 | 0 | 58 | 542 | 18 | 502 | 0.0 | 579 |
| MS.gene56929.t1 | MTR_8g083530 | 54.845 | 485 | 219 | 0 | 58 | 542 | 19 | 503 | 0.0 | 572 |
| MS.gene56929.t1 | MTR_6g086340 | 55.258 | 485 | 217 | 0 | 58 | 542 | 16 | 500 | 0.0 | 557 |
| MS.gene56929.t1 | MTR_8g083520 | 51.340 | 485 | 203 | 1 | 58 | 542 | 10 | 461 | 0.0 | 521 |
| MS.gene56929.t1 | MTR_8g083520 | 50.483 | 414 | 172 | 1 | 129 | 542 | 1 | 381 | 4.72e-150 | 435 |
| MS.gene56929.t1 | MTR_8g083530 | 54.079 | 331 | 152 | 0 | 58 | 388 | 19 | 349 | 5.50e-127 | 376 |
| MS.gene56929.t1 | MTR_4g106510 | 41.212 | 495 | 278 | 6 | 57 | 541 | 3 | 494 | 6.23e-114 | 347 |
| MS.gene56929.t1 | MTR_3g078550 | 39.630 | 487 | 281 | 6 | 65 | 541 | 11 | 494 | 1.22e-110 | 339 |
| MS.gene56929.t1 | MTR_3g078550 | 41.280 | 453 | 253 | 6 | 99 | 541 | 15 | 464 | 5.38e-107 | 328 |
| MS.gene56929.t1 | MTR_2g067660 | 40.254 | 472 | 277 | 4 | 62 | 532 | 47 | 514 | 4.67e-106 | 328 |
| MS.gene56929.t1 | MTR_3g078490 | 37.576 | 495 | 296 | 6 | 57 | 541 | 33 | 524 | 1.02e-102 | 319 |
| MS.gene56929.t1 | MTR_1690s0010 | 42.647 | 340 | 188 | 5 | 65 | 401 | 12 | 347 | 6.93e-75 | 241 |
| MS.gene56929.t1 | MTR_3g078490 | 36.842 | 342 | 205 | 5 | 57 | 390 | 3 | 341 | 3.33e-60 | 203 |
| MS.gene56929.t1 | MTR_2g034160 | 29.854 | 479 | 304 | 11 | 75 | 533 | 62 | 528 | 1.94e-57 | 202 |
| MS.gene56929.t1 | MTR_1g014320 | 29.615 | 493 | 309 | 10 | 67 | 541 | 21 | 493 | 8.10e-55 | 192 |
| MS.gene56929.t1 | MTR_2g042330 | 29.474 | 475 | 313 | 12 | 65 | 528 | 25 | 488 | 6.16e-54 | 190 |
| MS.gene56929.t1 | MTR_4g131180 | 28.571 | 497 | 317 | 10 | 63 | 541 | 17 | 493 | 1.30e-51 | 184 |
| MS.gene56929.t1 | MTR_4g093170 | 31.590 | 478 | 311 | 10 | 64 | 532 | 44 | 514 | 2.56e-48 | 176 |
| MS.gene56929.t1 | MTR_2g009750 | 30.480 | 479 | 315 | 11 | 64 | 532 | 17 | 487 | 6.75e-48 | 174 |
| MS.gene56929.t1 | MTR_2g009750 | 30.544 | 478 | 315 | 11 | 64 | 532 | 16 | 485 | 1.28e-47 | 173 |
| MS.gene56929.t1 | MTR_2g009750 | 30.544 | 478 | 315 | 11 | 64 | 532 | 17 | 486 | 1.80e-47 | 173 |
| MS.gene56929.t1 | MTR_4g131180 | 28.508 | 449 | 286 | 9 | 63 | 495 | 17 | 446 | 3.01e-46 | 169 |
| MS.gene56929.t1 | MTR_8g076480 | 30.769 | 351 | 229 | 8 | 186 | 533 | 100 | 439 | 5.96e-38 | 146 |
| MS.gene56929.t1 | MTR_1399s0020 | 28.926 | 363 | 206 | 4 | 170 | 530 | 23 | 335 | 7.34e-38 | 142 |
| MS.gene56929.t1 | MTR_1g029840 | 29.476 | 458 | 279 | 14 | 97 | 533 | 12 | 446 | 4.16e-37 | 144 |
| MS.gene56929.t1 | MTR_1g029840 | 31.014 | 345 | 224 | 8 | 194 | 533 | 111 | 446 | 1.52e-33 | 133 |
| MS.gene56929.t1 | MTR_8g094600 | 28.696 | 345 | 232 | 8 | 194 | 533 | 164 | 499 | 1.99e-32 | 131 |
| MS.gene56929.t1 | MTR_1222s0010 | 31.421 | 366 | 223 | 10 | 129 | 483 | 31 | 379 | 9.42e-32 | 130 |
| MS.gene56929.t1 | MTR_2g097950 | 27.586 | 464 | 303 | 15 | 87 | 532 | 4 | 452 | 1.70e-30 | 125 |
| MS.gene56929.t1 | MTR_3g088150 | 28.510 | 463 | 277 | 19 | 97 | 533 | 14 | 448 | 1.29e-29 | 122 |
| MS.gene56929.t1 | MTR_2g097950 | 25.870 | 460 | 281 | 14 | 87 | 532 | 4 | 417 | 5.02e-25 | 108 |
| MS.gene56929.t1 | MTR_1314s0010 | 26.744 | 344 | 238 | 6 | 199 | 534 | 1 | 338 | 1.96e-22 | 99.4 |
| MS.gene56929.t1 | MTR_0002s0820 | 49.167 | 120 | 44 | 2 | 242 | 344 | 29 | 148 | 1.02e-21 | 92.4 |
| MS.gene56929.t1 | MTR_4g065040 | 27.626 | 438 | 292 | 15 | 109 | 533 | 13 | 438 | 1.06e-21 | 98.6 |
| MS.gene56929.t1 | MTR_4g107940 | 25.951 | 447 | 274 | 18 | 64 | 476 | 53 | 476 | 8.27e-14 | 74.3 |
| MS.gene56929.t1 | MTR_4g107940 | 25.951 | 447 | 274 | 18 | 64 | 476 | 53 | 476 | 9.65e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56929.t1 | AT3G48000 | 77.901 | 543 | 114 | 2 | 1 | 542 | 1 | 538 | 0.0 | 887 |
| MS.gene56929.t1 | AT1G23800 | 78.330 | 503 | 108 | 1 | 41 | 542 | 32 | 534 | 0.0 | 855 |
| MS.gene56929.t1 | AT1G23800 | 78.386 | 347 | 74 | 1 | 41 | 386 | 32 | 378 | 0.0 | 593 |
| MS.gene56929.t1 | AT3G24503 | 54.639 | 485 | 219 | 1 | 59 | 542 | 17 | 501 | 0.0 | 561 |
| MS.gene56929.t1 | AT3G48170 | 42.222 | 495 | 273 | 7 | 57 | 541 | 3 | 494 | 5.81e-128 | 384 |
| MS.gene56929.t1 | AT1G74920 | 40.286 | 489 | 279 | 6 | 63 | 541 | 9 | 494 | 1.19e-117 | 357 |
| MS.gene56929.t1 | AT1G74920 | 40.491 | 489 | 273 | 7 | 63 | 541 | 9 | 489 | 9.08e-116 | 352 |
| MS.gene56929.t1 | AT1G79440 | 41.102 | 472 | 273 | 4 | 62 | 532 | 53 | 520 | 7.25e-109 | 335 |
| MS.gene56929.t1 | AT3G66658 | 28.782 | 476 | 313 | 10 | 75 | 533 | 62 | 528 | 1.83e-54 | 193 |
| MS.gene56929.t1 | AT3G66658 | 28.782 | 476 | 313 | 10 | 75 | 533 | 62 | 528 | 4.68e-54 | 192 |
| MS.gene56929.t1 | AT2G14170 | 31.591 | 440 | 284 | 10 | 64 | 495 | 7 | 437 | 1.06e-53 | 189 |
| MS.gene56929.t1 | AT1G54100 | 29.735 | 491 | 307 | 16 | 59 | 528 | 14 | 487 | 1.21e-53 | 190 |
| MS.gene56929.t1 | AT1G54100 | 29.735 | 491 | 307 | 16 | 59 | 528 | 14 | 487 | 1.21e-53 | 190 |
| MS.gene56929.t1 | AT2G14170 | 31.591 | 440 | 284 | 10 | 64 | 495 | 116 | 546 | 4.93e-53 | 190 |
| MS.gene56929.t1 | AT2G14170 | 31.591 | 440 | 284 | 10 | 64 | 495 | 116 | 546 | 6.08e-53 | 190 |
| MS.gene56929.t1 | AT2G24270 | 28.831 | 496 | 317 | 10 | 63 | 541 | 17 | 493 | 1.06e-50 | 181 |
| MS.gene56929.t1 | AT2G24270 | 28.831 | 496 | 317 | 10 | 63 | 541 | 17 | 493 | 1.06e-50 | 181 |
| MS.gene56929.t1 | AT2G24270 | 28.831 | 496 | 317 | 10 | 63 | 541 | 17 | 493 | 1.45e-50 | 181 |
| MS.gene56929.t1 | AT2G24270 | 28.831 | 496 | 317 | 10 | 63 | 541 | 57 | 533 | 3.98e-50 | 181 |
| MS.gene56929.t1 | AT1G44170 | 28.444 | 450 | 295 | 12 | 96 | 533 | 8 | 442 | 5.65e-36 | 140 |
| MS.gene56929.t1 | AT1G44170 | 28.444 | 450 | 295 | 12 | 96 | 533 | 8 | 442 | 5.65e-36 | 140 |
| MS.gene56929.t1 | AT1G44170 | 29.462 | 353 | 235 | 8 | 184 | 533 | 38 | 379 | 7.43e-34 | 133 |
| MS.gene56929.t1 | AT4G36250 | 27.313 | 454 | 301 | 14 | 95 | 533 | 2 | 441 | 7.94e-32 | 129 |
| MS.gene56929.t1 | AT4G34240 | 29.565 | 345 | 229 | 8 | 194 | 533 | 28 | 363 | 1.89e-29 | 120 |
| MS.gene56929.t1 | AT4G34240 | 29.565 | 345 | 229 | 8 | 194 | 533 | 155 | 490 | 5.32e-29 | 121 |
| MS.gene56929.t1 | AT4G34240 | 29.565 | 345 | 229 | 8 | 194 | 533 | 170 | 505 | 7.28e-29 | 120 |
| MS.gene56929.t1 | AT4G34240 | 37.908 | 153 | 86 | 5 | 194 | 343 | 170 | 316 | 5.19e-14 | 74.3 |
| MS.gene56929.t1 | AT5G62530 | 24.655 | 507 | 306 | 20 | 9 | 476 | 10 | 479 | 3.50e-12 | 69.3 |
Find 118 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTCTACACCCTTCTTAAA+TGG | 0.197274 | 8.1:+18677628 | None:intergenic |
| GGTGTTCTGAATATAGTTTC+TGG | 0.259968 | 8.1:-18678433 | MS.gene56929:CDS |
| TCCCTATCTTCTTCTTCTTC+TGG | 0.264024 | 8.1:-18679861 | MS.gene56929:CDS |
| TATACACAGCATCTTATAAA+TGG | 0.265985 | 8.1:-18679621 | MS.gene56929:CDS |
| ATAGCTAAAGATGAAATATT+TGG | 0.274465 | 8.1:-18677139 | MS.gene56929:CDS |
| AACTTCAAGATTGTTTGAAC+TGG | 0.321595 | 8.1:+18677115 | None:intergenic |
| TTTGATGCTGCAATTCCTTT+TGG | 0.337580 | 8.1:-18676563 | MS.gene56929:CDS |
| CAGGGGCAATGTTGCTGTGC+TGG | 0.338597 | 8.1:-18677736 | MS.gene56929:CDS |
| CGGGCAAATGCGACACGTTA+TGG | 0.342683 | 8.1:-18676683 | MS.gene56929:CDS |
| CTTATGTTTGCTTGGAAAGT+TGG | 0.345455 | 8.1:-18678785 | MS.gene56929:CDS |
| GCTCGCGAGGCCTTTGATAA+TGG | 0.361374 | 8.1:-18679303 | MS.gene56929:CDS |
| CAATGATGAGATTGCAGCTC+TGG | 0.388029 | 8.1:-18679111 | MS.gene56929:CDS |
| CTGAATATAGTTTCTGGCTA+TGG | 0.400820 | 8.1:-18678427 | MS.gene56929:CDS |
| ATTTGTCCTGCTACACCAAT+TGG | 0.404459 | 8.1:+18678830 | None:intergenic |
| AAACATAGGCACTTCAGCTT+TGG | 0.416059 | 8.1:+18679052 | None:intergenic |
| TTCCTCTACTTATGTTTGCT+TGG | 0.416543 | 8.1:-18678793 | MS.gene56929:CDS |
| GTACTTAGGTATATAAAGTC+TGG | 0.417316 | 8.1:-18677363 | MS.gene56929:CDS |
| GGGTGTAGAGCAAGGTCCTC+AGG | 0.420237 | 8.1:-18677617 | MS.gene56929:intron |
| GCGTATCTATGATGAGTTCT+TGG | 0.421951 | 8.1:-18677692 | MS.gene56929:CDS |
| CGAAATAAACGCACAAACAT+AGG | 0.435189 | 8.1:+18679038 | None:intergenic |
| CCTCCAAGTTCTAATGTCAC+TGG | 0.435566 | 8.1:+18677924 | None:intergenic |
| ACAAGATGAGTGGGATTGGC+AGG | 0.439485 | 8.1:-18676535 | MS.gene56929:CDS |
| CATATAATCACAGATTGATT+CGG | 0.441736 | 8.1:-18677400 | MS.gene56929:intron |
| CGTTTATTTCGCTACTATGC+TGG | 0.448875 | 8.1:-18679026 | MS.gene56929:intron |
| AGTGGGATTGGCAGGGAGAA+AGG | 0.449690 | 8.1:-18676527 | MS.gene56929:CDS |
| GGGCTGACAGTCCCGGCTGA+TGG | 0.456913 | 8.1:-18678881 | MS.gene56929:CDS |
| TGCACCTCTTGCAAGTCATA+TGG | 0.459614 | 8.1:-18678392 | MS.gene56929:CDS |
| TCTGGCTATGGTCCAACTGC+TGG | 0.461907 | 8.1:-18678415 | MS.gene56929:CDS |
| GTTGGACCAGCTCTAGCAAC+TGG | 0.462042 | 8.1:-18678767 | MS.gene56929:CDS |
| GGTTGGGCAGATAAAATTCA+TGG | 0.462723 | 8.1:-18678902 | MS.gene56929:CDS |
| CAATGGAAAGCTTTATGAAC+AGG | 0.463242 | 8.1:-18679078 | MS.gene56929:CDS |
| CAATTGGTTCATGCAATGTC+TGG | 0.464296 | 8.1:+18678846 | None:intergenic |
| CATTTGAAAATACAGTTGGC+TGG | 0.474193 | 8.1:+18677277 | None:intergenic |
| TCTTATAAATGGAAAGTTTG+TGG | 0.475036 | 8.1:-18679610 | MS.gene56929:CDS |
| CGAGCTTTGAGACGTGTTGT+TGG | 0.485526 | 8.1:-18677655 | MS.gene56929:CDS |
| CATGAACCAATTGGTGTAGC+AGG | 0.486086 | 8.1:-18678836 | MS.gene56929:CDS |
| ACCACGCAGGATTGTTTAGT+GGG | 0.487590 | 8.1:+18676459 | None:intergenic |
| ACACGTTATGGTTTAGCAGC+AGG | 0.491235 | 8.1:-18676671 | MS.gene56929:CDS |
| AACCACGCAGGATTGTTTAG+TGG | 0.492355 | 8.1:+18676458 | None:intergenic |
| TTGATGCGAGCACTGAGAGC+TGG | 0.499461 | 8.1:-18676614 | MS.gene56929:CDS |
| GGTGGGAGATTGGGTTCAAA+AGG | 0.508117 | 8.1:-18677309 | MS.gene56929:CDS |
| TGTTGGTGATCCATTTAAGA+AGG | 0.513847 | 8.1:-18677638 | MS.gene56929:CDS |
| GTGTTTGTTCAGCAGTCTTG+AGG | 0.515992 | 8.1:+18678732 | None:intergenic |
| CTCATCTTGTAACCACCAAA+AGG | 0.518735 | 8.1:+18676548 | None:intergenic |
| CAGTGCTCGCATCAAAGTGT+TGG | 0.519721 | 8.1:+18676622 | None:intergenic |
| AAGTTTGTGGATGCTGCATC+AGG | 0.521889 | 8.1:-18679597 | MS.gene56929:intron |
| GCAAGAGGTGCACCAGCAGT+TGG | 0.526586 | 8.1:+18678403 | None:intergenic |
| GCCACAACTAGAGCCGTTAG+CGG | 0.530174 | 8.1:+18678710 | None:intergenic |
| AATTCATGGGCTGACAGTCC+CGG | 0.531987 | 8.1:-18678888 | MS.gene56929:CDS |
| TACGCTCATGTACGAAGGTA+CGG | 0.532200 | 8.1:+18677710 | None:intergenic |
| TGAACATTTGAAAATACAGT+TGG | 0.537593 | 8.1:+18677273 | None:intergenic |
| AGATTGCAGCTCTGGAGGCA+TGG | 0.541033 | 8.1:-18679103 | MS.gene56929:CDS |
| ACATGATAATCTCCATCAGC+CGG | 0.543115 | 8.1:+18678869 | None:intergenic |
| AGGCCAAGGTCCATTATCAA+AGG | 0.545871 | 8.1:+18679293 | None:intergenic |
| TCTCTGCTTCGCTCACCACT+AGG | 0.546648 | 8.1:-18679828 | MS.gene56929:intron |
| GTATTACCAGTTGCTAGAGC+TGG | 0.547936 | 8.1:+18678761 | None:intergenic |
| AACAATTTGAGAAAGTACTT+AGG | 0.548163 | 8.1:-18677377 | MS.gene56929:CDS |
| TCCTCAGGAAGAAAATCTGA+AGG | 0.549242 | 8.1:-18679717 | MS.gene56929:intron |
| TAGCACGGCTGCAGCTGTTG+AGG | 0.549679 | 8.1:-18679673 | MS.gene56929:CDS |
| CAGACATTGCATGAACCAAT+TGG | 0.550440 | 8.1:-18678845 | MS.gene56929:CDS |
| TTGGTGGTTACAAGATGAGT+GGG | 0.550811 | 8.1:-18676544 | MS.gene56929:CDS |
| GCATCCTCACAAACGATGAA+AGG | 0.551646 | 8.1:+18677894 | None:intergenic |
| CCAACACTTGATCCACGCAC+AGG | 0.554257 | 8.1:-18679387 | MS.gene56929:CDS |
| GTATAGTTTATTGAAACTTG+TGG | 0.555590 | 8.1:+18679639 | None:intergenic |
| CAGTCTTCACAACTATCTGC+AGG | 0.559138 | 8.1:-18676498 | MS.gene56929:CDS |
| GCAACGCTACACTTGAATGT+GGG | 0.562365 | 8.1:-18677332 | MS.gene56929:CDS |
| ATCGCCTTTCATCGTTTGTG+AGG | 0.563181 | 8.1:-18677898 | MS.gene56929:CDS |
| CGCGAGCTGCTGATACTGCA+CGG | 0.563681 | 8.1:+18679319 | None:intergenic |
| GAAACTATATTCAGAACACC+TGG | 0.565262 | 8.1:+18678436 | None:intergenic |
| ACCGCTAACGGCTCTAGTTG+TGG | 0.565705 | 8.1:-18678711 | MS.gene56929:CDS |
| ACTTCAAGATTGTTTGAACT+GGG | 0.567832 | 8.1:+18677116 | None:intergenic |
| AAGTCATATGGATGTGGACA+AGG | 0.571259 | 8.1:-18678380 | MS.gene56929:intron |
| TGCAGTATCAGCAGCTCGCG+AGG | 0.571861 | 8.1:-18679316 | MS.gene56929:CDS |
| AGGCCTTTGATAATGGACCT+TGG | 0.572993 | 8.1:-18679296 | MS.gene56929:CDS |
| AAGCCAGTGACATTAGAACT+TGG | 0.577070 | 8.1:-18677927 | MS.gene56929:CDS |
| TGATGAGATTGCAGCTCTGG+AGG | 0.579914 | 8.1:-18679108 | MS.gene56929:CDS |
| CAACACTTGATCCACGCACA+GGG | 0.583173 | 8.1:-18679386 | MS.gene56929:CDS |
| ACGCTCATGTACGAAGGTAC+GGG | 0.584337 | 8.1:+18677711 | None:intergenic |
| TCTTGCAAGTCATATGGATG+TGG | 0.585216 | 8.1:-18678386 | MS.gene56929:CDS |
| GGTTACAAGATGAGTGGGAT+TGG | 0.587246 | 8.1:-18676539 | MS.gene56929:CDS |
| TTTGGTGGTTACAAGATGAG+TGG | 0.587661 | 8.1:-18676545 | MS.gene56929:CDS |
| GCTCTGGAGGCATGGAACAA+TGG | 0.593860 | 8.1:-18679095 | MS.gene56929:CDS |
| TGCTGAACAAACACCGCTAA+CGG | 0.594512 | 8.1:-18678723 | MS.gene56929:CDS |
| CATGATAATCTCCATCAGCC+GGG | 0.597998 | 8.1:+18678870 | None:intergenic |
| TAGCAGGACAAATTATACCT+TGG | 0.599069 | 8.1:-18678820 | MS.gene56929:CDS |
| TTCACTGGATCGACAGACAC+CGG | 0.599102 | 8.1:-18677987 | MS.gene56929:CDS |
| TGAGTTCTTGGAGAAATCAA+AGG | 0.600349 | 8.1:-18677680 | MS.gene56929:CDS |
| AGCAACGCTACACTTGAATG+TGG | 0.602612 | 8.1:-18677333 | MS.gene56929:CDS |
| TTTAAGAAGGGTGTAGAGCA+AGG | 0.602977 | 8.1:-18677625 | MS.gene56929:CDS |
| CAACGCTACACTTGAATGTG+GGG | 0.606542 | 8.1:-18677331 | MS.gene56929:CDS |
| CATTGATGAAGTGATACGAC+GGG | 0.606740 | 8.1:-18676702 | MS.gene56929:CDS |
| GCAATCACTTCCCCTGTGCG+TGG | 0.607313 | 8.1:+18679375 | None:intergenic |
| TTCCAAGCAAACATAAGTAG+AGG | 0.607329 | 8.1:+18678791 | None:intergenic |
| ATAAGTAGAGGAAAATTCCA+AGG | 0.608554 | 8.1:+18678803 | None:intergenic |
| GTTGGTGATCCATTTAAGAA+GGG | 0.612396 | 8.1:-18677637 | MS.gene56929:CDS |
| CAGTGACATTAGAACTTGGA+GGG | 0.613710 | 8.1:-18677923 | MS.gene56929:CDS |
| CCTGTGCGTGGATCAAGTGT+TGG | 0.614841 | 8.1:+18679387 | None:intergenic |
| CCAGTGACATTAGAACTTGG+AGG | 0.615553 | 8.1:-18677924 | MS.gene56929:CDS |
| AACTATATTCAGAACACCTG+GGG | 0.624850 | 8.1:+18678438 | None:intergenic |
| TTCAGCAGTCTTGAGGACAA+TGG | 0.626841 | 8.1:+18678739 | None:intergenic |
| CCTCAGGAAGAAAATCTGAA+GGG | 0.629478 | 8.1:-18679716 | MS.gene56929:intron |
| GTTGGGCAGATAAAATTCAT+GGG | 0.630864 | 8.1:-18678901 | MS.gene56929:CDS |
| TGTGGCAAAACTACTTCATG+AGG | 0.633494 | 8.1:-18678693 | MS.gene56929:intron |
| AAACACAAACAGATTTAGCA+CGG | 0.643860 | 8.1:-18679688 | MS.gene56929:CDS |
| CAAGATGAGTGGGATTGGCA+GGG | 0.649063 | 8.1:-18676534 | MS.gene56929:CDS |
| CTATCTGCAGGTAAAAGCTG+TGG | 0.651181 | 8.1:-18676486 | MS.gene56929:CDS |
| ACATCCATATGACTTGCAAG+AGG | 0.657822 | 8.1:+18678388 | None:intergenic |
| AAACTATATTCAGAACACCT+GGG | 0.660081 | 8.1:+18678437 | None:intergenic |
| GTGATTGCTAATGTTGCTGA+AGG | 0.664610 | 8.1:-18679360 | MS.gene56929:CDS |
| TACAATAGTTACAACCACGC+AGG | 0.667386 | 8.1:+18676446 | None:intergenic |
| AACGCTACACTTGAATGTGG+GGG | 0.677284 | 8.1:-18677330 | MS.gene56929:CDS |
| CACTGAGAGCTGGAACAGTG+TGG | 0.679723 | 8.1:-18676604 | MS.gene56929:CDS |
| ACATTGATGAAGTGATACGA+CGG | 0.686641 | 8.1:-18676703 | MS.gene56929:CDS |
| ATAGATACGCTCATGTACGA+AGG | 0.703638 | 8.1:+18677705 | None:intergenic |
| AACACTTGATCCACGCACAG+GGG | 0.713063 | 8.1:-18679385 | MS.gene56929:CDS |
| CCCCACTAAACAATCCTGCG+TGG | 0.713685 | 8.1:-18676460 | MS.gene56929:CDS |
| CCACGCAGGATTGTTTAGTG+GGG | 0.720413 | 8.1:+18676460 | None:intergenic |
| ACTATATTCAGAACACCTGG+GGG | 0.743292 | 8.1:+18678439 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATATTTTATATTTAT+AGG | - | chr8.1:18679624-18679643 | MS.gene56929:CDS | 0.0% |
| !!! | TTTTATATTTTATATTTATA+GGG | - | chr8.1:18679625-18679644 | MS.gene56929:CDS | 0.0% |
| !! | AATAAAGAATTTAATAACTA+AGG | + | chr8.1:18679537-18679556 | None:intergenic | 10.0% |
| !!! | GATAAAATTGATTCATTATT+TGG | - | chr8.1:18678299-18678318 | MS.gene56929:intron | 15.0% |
| !! | ATAAGAGAGGTTATAAAAAT+TGG | - | chr8.1:18678226-18678245 | MS.gene56929:intron | 20.0% |
| !! | ATAGCTAAAGATGAAATATT+TGG | - | chr8.1:18679212-18679231 | MS.gene56929:intron | 20.0% |
| !! | TAGCTTGAAATTTATGATTA+TGG | - | chr8.1:18677144-18677163 | MS.gene56929:CDS | 20.0% |
| !! | TATTCAATCATATTTCAGTA+TGG | - | chr8.1:18679419-18679438 | MS.gene56929:intron | 20.0% |
| !!! | ACTACTTTCTAAAACAAATA+CGG | - | chr8.1:18678551-18678570 | MS.gene56929:intron | 20.0% |
| !!! | ATATGTTTTTTTCTTATGCA+TGG | - | chr8.1:18676584-18676603 | MS.gene56929:CDS | 20.0% |
| !!! | TGTTTTCTTTGTTAAAATTC+AGG | - | chr8.1:18679289-18679308 | MS.gene56929:CDS | 20.0% |
| ! | AAAAACAATAATGGTTAGAC+TGG | + | chr8.1:18677426-18677445 | None:intergenic | 25.0% |
| ! | AAAACAATAATGGTTAGACT+GGG | + | chr8.1:18677425-18677444 | None:intergenic | 25.0% |
| ! | AAAATTGAGGTTAACTTATG+AGG | + | chr8.1:18677786-18677805 | None:intergenic | 25.0% |
| ! | AGAAAAAGAAAAATGAGACA+AGG | + | chr8.1:18678819-18678838 | None:intergenic | 25.0% |
| ! | CATATAATCACAGATTGATT+CGG | - | chr8.1:18678951-18678970 | MS.gene56929:intron | 25.0% |
| ! | CATTAACATGTGTTAGAAAA+TGG | + | chr8.1:18679168-18679187 | None:intergenic | 25.0% |
| ! | CTCAAAATAATAGTCGTTTA+AGG | - | chr8.1:18676813-18676832 | MS.gene56929:intron | 25.0% |
| ! | CTTGAATATAAAAATACCTG+AGG | + | chr8.1:18678753-18678772 | None:intergenic | 25.0% |
| ! | GAAATTTATGATTATGGTGA+TGG | - | chr8.1:18677150-18677169 | MS.gene56929:CDS | 25.0% |
| ! | GTATAGTTTATTGAAACTTG+TGG | + | chr8.1:18676715-18676734 | None:intergenic | 25.0% |
| ! | TATACACAGCATCTTATAAA+TGG | - | chr8.1:18676730-18676749 | MS.gene56929:intron | 25.0% |
| ! | TCTTATAAATGGAAAGTTTG+TGG | - | chr8.1:18676741-18676760 | MS.gene56929:intron | 25.0% |
| ! | TGAACATTTGAAAATACAGT+TGG | + | chr8.1:18679081-18679100 | None:intergenic | 25.0% |
| ! | TTAGGCTCTTATATTAAACA+TGG | - | chr8.1:18676912-18676931 | MS.gene56929:intron | 25.0% |
| ! | TTCAATGATAAACTATTGAG+TGG | - | chr8.1:18676876-18676895 | MS.gene56929:intron | 25.0% |
| !! | AACTGTATTTTCAAATGTTC+AGG | - | chr8.1:18679080-18679099 | MS.gene56929:CDS | 25.0% |
| !! | CATTTTCTAACACATGTTAA+TGG | - | chr8.1:18679166-18679185 | MS.gene56929:intron | 25.0% |
| !! | CTGTCTAAAATGTTTGTATA+CGG | - | chr8.1:18679506-18679525 | MS.gene56929:intron | 25.0% |
| !! | TATTTGACTATCCTTTTCAT+GGG | - | chr8.1:18678850-18678869 | MS.gene56929:CDS | 25.0% |
| !! | TCATAAGTTAACCTCAATTT+TGG | - | chr8.1:18677785-18677804 | MS.gene56929:intron | 25.0% |
| !! | TTATTTGACTATCCTTTTCA+TGG | - | chr8.1:18678849-18678868 | MS.gene56929:CDS | 25.0% |
| !!! | AACAATTTGAGAAAGTACTT+AGG | - | chr8.1:18678974-18678993 | MS.gene56929:intron | 25.0% |
| !!! | ATTAAAAAAGCATTGACACA+AGG | + | chr8.1:18677372-18677391 | None:intergenic | 25.0% |
| !!! | CATTATTGTTTTTACAGGTT+GGG | - | chr8.1:18677433-18677452 | MS.gene56929:intron | 25.0% |
| !!! | CTAACCATTATTGTTTTTAC+AGG | - | chr8.1:18677428-18677447 | MS.gene56929:intron | 25.0% |
| !!! | GTATTTGTTTTAGAAAGTAG+TGG | + | chr8.1:18678552-18678571 | None:intergenic | 25.0% |
| AAACAATAATGGTTAGACTG+GGG | + | chr8.1:18677424-18677443 | None:intergenic | 30.0% | |
| AAACACAAACAGATTTAGCA+CGG | - | chr8.1:18676663-18676682 | MS.gene56929:CDS | 30.0% | |
| AAACTATATTCAGAACACCT+GGG | + | chr8.1:18677917-18677936 | None:intergenic | 30.0% | |
| AACAAAGAAAACAAGCAAGT+AGG | + | chr8.1:18679282-18679301 | None:intergenic | 30.0% | |
| AACTTCAAGATTGTTTGAAC+TGG | + | chr8.1:18679239-18679258 | None:intergenic | 30.0% | |
| AAGGGTAATTGTTTCACAAT+TGG | + | chr8.1:18677748-18677767 | None:intergenic | 30.0% | |
| ACTTCAAGATTGTTTGAACT+GGG | + | chr8.1:18679238-18679257 | None:intergenic | 30.0% | |
| ATAACCTCTCTTATACAGTA+AGG | + | chr8.1:18678220-18678239 | None:intergenic | 30.0% | |
| ATAAGGAATTGAATACCTAG+TGG | + | chr8.1:18676541-18676560 | None:intergenic | 30.0% | |
| ATAAGTAGAGGAAAATTCCA+AGG | + | chr8.1:18677551-18677570 | None:intergenic | 30.0% | |
| CATGTTAATGGCTATTACAT+AGG | - | chr8.1:18679178-18679197 | MS.gene56929:intron | 30.0% | |
| CCAACCTGTAAAAACAATAA+TGG | + | chr8.1:18677435-18677454 | None:intergenic | 30.0% | |
| CTAAAACAAATACGGAAATG+TGG | - | chr8.1:18678559-18678578 | MS.gene56929:intron | 30.0% | |
| CTAAAATGTTTGTATACGGT+TGG | - | chr8.1:18679510-18679529 | MS.gene56929:intron | 30.0% | |
| CTATTGTAACATTACCCTAT+AGG | - | chr8.1:18678785-18678804 | MS.gene56929:CDS | 30.0% | |
| CTTATGAGGTCAAAAACTAA+AGG | + | chr8.1:18677772-18677791 | None:intergenic | 30.0% | |
| GAAGATTACAGCTTAACATT+TGG | + | chr8.1:18677869-18677888 | None:intergenic | 30.0% | |
| GTACTTAGGTATATAAAGTC+TGG | - | chr8.1:18678988-18679007 | MS.gene56929:intron | 30.0% | |
| TAACATCAAGCTAAGTTCAT+CGG | + | chr8.1:18678069-18678088 | None:intergenic | 30.0% | |
| TATACCTTACTGTATAAGAG+AGG | - | chr8.1:18678213-18678232 | MS.gene56929:intron | 30.0% | |
| TATAGAAGTTCATGCAAGAA+AGG | + | chr8.1:18677121-18677140 | None:intergenic | 30.0% | |
| TATGCATGGAATAAGATTTC+TGG | - | chr8.1:18676598-18676617 | MS.gene56929:CDS | 30.0% | |
| TATTTAACAGCAACGCATAA+TGG | + | chr8.1:18678110-18678129 | None:intergenic | 30.0% | |
| ! | AACAACATAACACTGTTTTG+TGG | - | chr8.1:18678922-18678941 | MS.gene56929:intron | 30.0% |
| ! | CGTATACAAACATTTTAGAC+AGG | + | chr8.1:18679508-18679527 | None:intergenic | 30.0% |
| ! | CGTTGCTGTTAAATATGTTT+AGG | - | chr8.1:18678115-18678134 | MS.gene56929:intron | 30.0% |
| ! | CTTACATAAGCACTCATTTT+AGG | + | chr8.1:18677081-18677100 | None:intergenic | 30.0% |
| ! | CTTTGCTCTTTTCTTTAATC+AGG | - | chr8.1:18678510-18678529 | MS.gene56929:intron | 30.0% |
| ! | GGTTTATTGATAACTCTTTC+AGG | - | chr8.1:18677171-18677190 | MS.gene56929:intron | 30.0% |
| ! | TTTCTTTTGACATCAAAGCA+TGG | + | chr8.1:18677703-18677722 | None:intergenic | 30.0% |
| !!! | ATGGAGTTTCTTTTGATTTC+AGG | - | chr8.1:18676931-18676950 | MS.gene56929:intron | 30.0% |
| !!! | CCATTATTGTTTTTACAGGT+TGG | - | chr8.1:18677432-18677451 | MS.gene56929:intron | 30.0% |
| !!! | TGGAGTTTCTTTTGATTTCA+GGG | - | chr8.1:18676932-18676951 | MS.gene56929:intron | 30.0% |
| AACTATATTCAGAACACCTG+GGG | + | chr8.1:18677916-18677935 | None:intergenic | 35.0% | |
| AACTTCAAAGCTATTCTGCA+TGG | - | chr8.1:18679331-18679350 | MS.gene56929:CDS | 35.0% | |
| ACAAGGAACATAGACCTATA+GGG | + | chr8.1:18678802-18678821 | None:intergenic | 35.0% | |
| ACAGTTACAGTTACAGGATA+AGG | + | chr8.1:18676558-18676577 | None:intergenic | 35.0% | |
| ACATTGATGAAGTGATACGA+CGG | - | chr8.1:18679648-18679667 | MS.gene56929:CDS | 35.0% | |
| ACCTTGGAATATTTGTAGTG+TGG | - | chr8.1:18679577-18679596 | MS.gene56929:intron | 35.0% | |
| ACTTCAAAGCTATTCTGCAT+GGG | - | chr8.1:18679332-18679351 | MS.gene56929:CDS | 35.0% | |
| AGGTCAAAAACTAAAGGCAA+GGG | + | chr8.1:18677766-18677785 | None:intergenic | 35.0% | |
| AGTGGAAGTGAAAACAAGTT+AGG | - | chr8.1:18676894-18676913 | MS.gene56929:intron | 35.0% | |
| ATCTTGAAGTTAGCATTCAC+TGG | - | chr8.1:18678277-18678296 | MS.gene56929:intron | 35.0% | |
| CATTTGAAAATACAGTTGGC+TGG | + | chr8.1:18679077-18679096 | None:intergenic | 35.0% | |
| CGAAATAAACGCACAAACAT+AGG | + | chr8.1:18677316-18677335 | None:intergenic | 35.0% | |
| CTGCATCAGGTAATGTTTAA+AGG | - | chr8.1:18676767-18676786 | MS.gene56929:intron | 35.0% | |
| CTTATGTTTGCTTGGAAAGT+TGG | - | chr8.1:18677566-18677585 | MS.gene56929:intron | 35.0% | |
| GAAACTATATTCAGAACACC+TGG | + | chr8.1:18677918-18677937 | None:intergenic | 35.0% | |
| GAAGTTCAAGTGAGTGAAAT+TGG | - | chr8.1:18679253-18679272 | MS.gene56929:intron | 35.0% | |
| GTATGGCATCATGCATAATA+TGG | - | chr8.1:18679436-18679455 | MS.gene56929:intron | 35.0% | |
| GTTGGGCAGATAAAATTCAT+GGG | - | chr8.1:18677450-18677469 | MS.gene56929:intron | 35.0% | |
| TAGAATTCAAGACAGTACCT+TGG | - | chr8.1:18679561-18679580 | MS.gene56929:intron | 35.0% | |
| TAGCAGGACAAATTATACCT+TGG | - | chr8.1:18677531-18677550 | MS.gene56929:intron | 35.0% | |
| TCCAGAAGAAGAAGAAGATA+GGG | + | chr8.1:18676494-18676513 | None:intergenic | 35.0% | |
| TGAGTTCTTGGAGAAATCAA+AGG | - | chr8.1:18678671-18678690 | MS.gene56929:intron | 35.0% | |
| TTCCAAGCAAACATAAGTAG+AGG | + | chr8.1:18677563-18677582 | None:intergenic | 35.0% | |
| TTCCTCTACTTATGTTTGCT+TGG | - | chr8.1:18677558-18677577 | MS.gene56929:intron | 35.0% | |
| TTTCTGTAAACAGTCACTTG+CGG | + | chr8.1:18679119-18679138 | None:intergenic | 35.0% | |
| ! | AGCTGTAATCTTCACACTTT+TGG | - | chr8.1:18677876-18677895 | MS.gene56929:CDS | 35.0% |
| ! | CAATGGAAAGCTTTATGAAC+AGG | - | chr8.1:18677273-18677292 | MS.gene56929:CDS | 35.0% |
| ! | GCTGTAATCTTCACACTTTT+GGG | - | chr8.1:18677877-18677896 | MS.gene56929:CDS | 35.0% |
| ! | GGTGTTCTGAATATAGTTTC+TGG | - | chr8.1:18677918-18677937 | MS.gene56929:CDS | 35.0% |
| ! | TTTGATGCTGCAATTCCTTT+TGG | - | chr8.1:18679788-18679807 | MS.gene56929:intron | 35.0% |
| !! | ATGCAGAATAGCTTTGAAGT+TGG | + | chr8.1:18679332-18679351 | None:intergenic | 35.0% |
| !! | CTGAATATAGTTTCTGGCTA+TGG | - | chr8.1:18677924-18677943 | MS.gene56929:CDS | 35.0% |
| !! | GCTTTGAAGTTGGAACATAA+TGG | + | chr8.1:18679322-18679341 | None:intergenic | 35.0% |
| !! | GTTGGTGATCCATTTAAGAA+GGG | - | chr8.1:18678714-18678733 | MS.gene56929:CDS | 35.0% |
| !! | TGTTGGTGATCCATTTAAGA+AGG | - | chr8.1:18678713-18678732 | MS.gene56929:CDS | 35.0% |
| !!! | CATTAGCTTTTCCCATGAAA+AGG | + | chr8.1:18678864-18678883 | None:intergenic | 35.0% |
| !!! | GGTTTATGTTTTGTTTCCTC+AGG | - | chr8.1:18676619-18676638 | MS.gene56929:CDS | 35.0% |
| AAACATAGGCACTTCAGCTT+TGG | + | chr8.1:18677302-18677321 | None:intergenic | 40.0% | |
| AAGCCAGTGACATTAGAACT+TGG | - | chr8.1:18678424-18678443 | MS.gene56929:CDS | 40.0% | |
| AAGTCATATGGATGTGGACA+AGG | - | chr8.1:18677971-18677990 | MS.gene56929:CDS | 40.0% | |
| ACATGATAATCTCCATCAGC+CGG | + | chr8.1:18677485-18677504 | None:intergenic | 40.0% | |
| ACTATATTCAGAACACCTGG+GGG | + | chr8.1:18677915-18677934 | None:intergenic | 40.0% | |
| ATAGATACGCTCATGTACGA+AGG | + | chr8.1:18678649-18678668 | None:intergenic | 40.0% | |
| ATTTGTCCTGCTACACCAAT+TGG | + | chr8.1:18677524-18677543 | None:intergenic | 40.0% | |
| CAGACATTGCATGAACCAAT+TGG | - | chr8.1:18677506-18677525 | MS.gene56929:intron | 40.0% | |
| CAGTGACATTAGAACTTGGA+GGG | - | chr8.1:18678428-18678447 | MS.gene56929:CDS | 40.0% | |
| CATTGATGAAGTGATACGAC+GGG | - | chr8.1:18679649-18679668 | MS.gene56929:CDS | 40.0% | |
| CCTCAGGAAGAAAATCTGAA+GGG | - | chr8.1:18676635-18676654 | MS.gene56929:CDS | 40.0% | |
| CGTTTATTTCGCTACTATGC+TGG | - | chr8.1:18677325-18677344 | MS.gene56929:CDS | 40.0% | |
| CTCATCTTGTAACCACCAAA+AGG | + | chr8.1:18679806-18679825 | None:intergenic | 40.0% | |
| CTCCAGAAGAAGAAGAAGAT+AGG | + | chr8.1:18676495-18676514 | None:intergenic | 40.0% | |
| GACAAGGAACATAGACCTAT+AGG | + | chr8.1:18678803-18678822 | None:intergenic | 40.0% | |
| GAGGTCAAAAACTAAAGGCA+AGG | + | chr8.1:18677767-18677786 | None:intergenic | 40.0% | |
| GCCACACTACAAATATTCCA+AGG | + | chr8.1:18679581-18679600 | None:intergenic | 40.0% | |
| GCGTATCTATGATGAGTTCT+TGG | - | chr8.1:18678659-18678678 | MS.gene56929:intron | 40.0% | |
| GGTTGGGCAGATAAAATTCA+TGG | - | chr8.1:18677449-18677468 | MS.gene56929:intron | 40.0% | |
| GTCCACAATACACGATCTTA+CGG | + | chr8.1:18679146-18679165 | None:intergenic | 40.0% | |
| GTGATTGCTAATGTTGCTGA+AGG | - | chr8.1:18676991-18677010 | MS.gene56929:intron | 40.0% | |
| TAGAAGCTTATGCCTTATGC+TGG | - | chr8.1:18678584-18678603 | MS.gene56929:intron | 40.0% | |
| TATTTCGCTACTATGCTGGT+AGG | - | chr8.1:18677329-18677348 | MS.gene56929:CDS | 40.0% | |
| TCCCTATCTTCTTCTTCTTC+TGG | - | chr8.1:18676490-18676509 | MS.gene56929:CDS | 40.0% | |
| TCCTCAGGAAGAAAATCTGA+AGG | - | chr8.1:18676634-18676653 | MS.gene56929:CDS | 40.0% | |
| TCTTGCAAGTCATATGGATG+TGG | - | chr8.1:18677965-18677984 | MS.gene56929:CDS | 40.0% | |
| TGCTCTACACCCTTCTTAAA+TGG | + | chr8.1:18678726-18678745 | None:intergenic | 40.0% | |
| TGTGGCAAAACTACTTCATG+AGG | - | chr8.1:18677658-18677677 | MS.gene56929:CDS | 40.0% | |
| ! | ACATCCATATGACTTGCAAG+AGG | + | chr8.1:18677966-18677985 | None:intergenic | 40.0% |
| ! | ATTTTGCAGTTAGCGTTCAC+TGG | - | chr8.1:18678349-18678368 | MS.gene56929:intron | 40.0% |
| ! | CAATTGGTTCATGCAATGTC+TGG | + | chr8.1:18677508-18677527 | None:intergenic | 40.0% |
| ! | CAGCTCAAGTACAGTTTTTC+CGG | + | chr8.1:18678386-18678405 | None:intergenic | 40.0% |
| ! | CTTATGCTGGATGCTTTTCA+GGG | - | chr8.1:18678597-18678616 | MS.gene56929:intron | 40.0% |
| ! | TAAGCACTCATTTTAGGCCA+AGG | + | chr8.1:18677075-18677094 | None:intergenic | 40.0% |
| ! | TAATCTTCACACTTTTGGGC+AGG | - | chr8.1:18677881-18677900 | MS.gene56929:CDS | 40.0% |
| ! | TTATGCTGGATGCTTTTCAG+GGG | - | chr8.1:18678598-18678617 | MS.gene56929:intron | 40.0% |
| ! | TTGGTGGTTACAAGATGAGT+GGG | - | chr8.1:18679807-18679826 | MS.gene56929:intron | 40.0% |
| ! | TTTAAGAAGGGTGTAGAGCA+AGG | - | chr8.1:18678726-18678745 | MS.gene56929:CDS | 40.0% |
| ! | TTTGGTGGTTACAAGATGAG+TGG | - | chr8.1:18679806-18679825 | MS.gene56929:intron | 40.0% |
| !! | AACAGCAACGCATAATGGAT+TGG | + | chr8.1:18678105-18678124 | None:intergenic | 40.0% |
| !! | ATTGCTGCGTTTTGCTGATT+TGG | - | chr8.1:18677207-18677226 | MS.gene56929:intron | 40.0% |
| AACCACGCAGGATTGTTTAG+TGG | + | chr8.1:18679896-18679915 | None:intergenic | 45.0% | |
| AACGCTACACTTGAATGTGG+GGG | - | chr8.1:18679021-18679040 | MS.gene56929:intron | 45.0% | |
| AAGTTTGTGGATGCTGCATC+AGG | - | chr8.1:18676754-18676773 | MS.gene56929:intron | 45.0% | |
| ACACGTTATGGTTTAGCAGC+AGG | - | chr8.1:18679680-18679699 | MS.gene56929:CDS | 45.0% | |
| ACCACGCAGGATTGTTTAGT+GGG | + | chr8.1:18679895-18679914 | None:intergenic | 45.0% | |
| AGCAACGCTACACTTGAATG+TGG | - | chr8.1:18679018-18679037 | MS.gene56929:intron | 45.0% | |
| AGGCCAAGGTCCATTATCAA+AGG | + | chr8.1:18677061-18677080 | None:intergenic | 45.0% | |
| ATCGCCTTTCATCGTTTGTG+AGG | - | chr8.1:18678453-18678472 | MS.gene56929:intron | 45.0% | |
| CAACGCTACACTTGAATGTG+GGG | - | chr8.1:18679020-18679039 | MS.gene56929:intron | 45.0% | |
| CAATGATGAGATTGCAGCTC+TGG | - | chr8.1:18677240-18677259 | MS.gene56929:intron | 45.0% | |
| CACCGTAAGATCGTGTATTG+TGG | - | chr8.1:18679141-18679160 | MS.gene56929:CDS | 45.0% | |
| CAGCATGCTAGCCAAAATTG+AGG | + | chr8.1:18677799-18677818 | None:intergenic | 45.0% | |
| CAGTCTTCACAACTATCTGC+AGG | - | chr8.1:18679853-18679872 | MS.gene56929:CDS | 45.0% | |
| CATGAACCAATTGGTGTAGC+AGG | - | chr8.1:18677515-18677534 | MS.gene56929:intron | 45.0% | |
| CATGATAATCTCCATCAGCC+GGG | + | chr8.1:18677484-18677503 | None:intergenic | 45.0% | |
| CCACACACAGTTACAGTTAC+AGG | + | chr8.1:18676564-18676583 | None:intergenic | 45.0% | |
| CCAGTGACATTAGAACTTGG+AGG | - | chr8.1:18678427-18678446 | MS.gene56929:CDS | 45.0% | |
| CCTGTAACTGTAACTGTGTG+TGG | - | chr8.1:18676561-18676580 | MS.gene56929:CDS | 45.0% | |
| CGGAAAAACTGTACTTGAGC+TGG | - | chr8.1:18678384-18678403 | MS.gene56929:CDS | 45.0% | |
| CTATCTGCAGGTAAAAGCTG+TGG | - | chr8.1:18679865-18679884 | MS.gene56929:CDS | 45.0% | |
| GCAACGCTACACTTGAATGT+GGG | - | chr8.1:18679019-18679038 | MS.gene56929:intron | 45.0% | |
| GCATCCTCACAAACGATGAA+AGG | + | chr8.1:18678460-18678479 | None:intergenic | 45.0% | |
| GGTTACAAGATGAGTGGGAT+TGG | - | chr8.1:18679812-18679831 | MS.gene56929:intron | 45.0% | |
| GTATTACCAGTTGCTAGAGC+TGG | + | chr8.1:18677593-18677612 | None:intergenic | 45.0% | |
| GTGTTTGTTCAGCAGTCTTG+AGG | + | chr8.1:18677622-18677641 | None:intergenic | 45.0% | |
| TACGCTCATGTACGAAGGTA+CGG | + | chr8.1:18678644-18678663 | None:intergenic | 45.0% | |
| TGCACCTCTTGCAAGTCATA+TGG | - | chr8.1:18677959-18677978 | MS.gene56929:CDS | 45.0% | |
| TGCTGAACAAACACCGCTAA+CGG | - | chr8.1:18677628-18677647 | MS.gene56929:CDS | 45.0% | |
| TTCAGCAGTCTTGAGGACAA+TGG | + | chr8.1:18677615-18677634 | None:intergenic | 45.0% | |
| ! | CCCTTCAGATTTTCTTCCTG+AGG | + | chr8.1:18676638-18676657 | None:intergenic | 45.0% |
| ! | CCTCCAAGTTCTAATGTCAC+TGG | + | chr8.1:18678430-18678449 | None:intergenic | 45.0% |
| ! | CCTTATGCTGGATGCTTTTC+AGG | - | chr8.1:18678596-18678615 | MS.gene56929:intron | 45.0% |
| ! | GATGCTGCAATTCCTTTTGG+TGG | - | chr8.1:18679791-18679810 | MS.gene56929:intron | 45.0% |
| !! | AGGCCTTTGATAATGGACCT+TGG | - | chr8.1:18677055-18677074 | MS.gene56929:intron | 45.0% |
| !! | CCTGAAAAGCATCCAGCATA+AGG | + | chr8.1:18678599-18678618 | None:intergenic | 45.0% |
| AACACTTGATCCACGCACAG+GGG | - | chr8.1:18676966-18676985 | MS.gene56929:intron | 50.0% | |
| CAACACTTGATCCACGCACA+GGG | - | chr8.1:18676965-18676984 | MS.gene56929:intron | 50.0% | |
| CAGTGCTCGCATCAAAGTGT+TGG | + | chr8.1:18679732-18679751 | None:intergenic | 50.0% | |
| CCACGCAGGATTGTTTAGTG+GGG | + | chr8.1:18679894-18679913 | None:intergenic | 50.0% | |
| CTACACTTGAATGTGGGGGT+GGG | - | chr8.1:18679025-18679044 | MS.gene56929:intron | 50.0% | |
| GGTGGGAGATTGGGTTCAAA+AGG | - | chr8.1:18679042-18679061 | MS.gene56929:CDS | 50.0% | |
| TGCAAGAAAGGACACTTCGC+AGG | + | chr8.1:18677109-18677128 | None:intergenic | 50.0% | |
| TTCACTGGATCGACAGACAC+CGG | - | chr8.1:18678364-18678383 | MS.gene56929:intron | 50.0% | |
| TTGTAGTGTGGCACGCAATG+TGG | - | chr8.1:18679589-18679608 | MS.gene56929:intron | 50.0% | |
| ! | AATTCATGGGCTGACAGTCC+CGG | - | chr8.1:18677463-18677482 | MS.gene56929:intron | 50.0% |
| ! | ACAAGATGAGTGGGATTGGC+AGG | - | chr8.1:18679816-18679835 | MS.gene56929:intron | 50.0% |
| ! | ACGCTCATGTACGAAGGTAC+GGG | + | chr8.1:18678643-18678662 | None:intergenic | 50.0% |
| ! | CAAGATGAGTGGGATTGGCA+GGG | - | chr8.1:18679817-18679836 | MS.gene56929:intron | 50.0% |
| ! | TGATGAGATTGCAGCTCTGG+AGG | - | chr8.1:18677243-18677262 | MS.gene56929:intron | 50.0% |
| !! | CGAGCTTTGAGACGTGTTGT+TGG | - | chr8.1:18678696-18678715 | MS.gene56929:CDS | 50.0% |
| CACTGAGAGCTGGAACAGTG+TGG | - | chr8.1:18679747-18679766 | MS.gene56929:intron | 55.0% | |
| CCAACACTTGATCCACGCAC+AGG | - | chr8.1:18676964-18676983 | MS.gene56929:intron | 55.0% | |
| CCCCACTAAACAATCCTGCG+TGG | - | chr8.1:18679891-18679910 | MS.gene56929:CDS | 55.0% | |
| CCTGTGCGTGGATCAAGTGT+TGG | + | chr8.1:18676967-18676986 | None:intergenic | 55.0% | |
| CGGGCAAATGCGACACGTTA+TGG | - | chr8.1:18679668-18679687 | MS.gene56929:CDS | 55.0% | |
| GAATGTGGGGGTGGGAGATT+GGG | - | chr8.1:18679033-18679052 | MS.gene56929:CDS | 55.0% | |
| GCCACAACTAGAGCCGTTAG+CGG | + | chr8.1:18677644-18677663 | None:intergenic | 55.0% | |
| GCTACACTTGAATGTGGGGG+TGG | - | chr8.1:18679024-18679043 | MS.gene56929:intron | 55.0% | |
| GCTCGCGAGGCCTTTGATAA+TGG | - | chr8.1:18677048-18677067 | MS.gene56929:intron | 55.0% | |
| TCTCTGCTTCGCTCACCACT+AGG | - | chr8.1:18676523-18676542 | MS.gene56929:CDS | 55.0% | |
| TCTGGCTATGGTCCAACTGC+TGG | - | chr8.1:18677936-18677955 | MS.gene56929:CDS | 55.0% | |
| TGAATGTGGGGGTGGGAGAT+TGG | - | chr8.1:18679032-18679051 | MS.gene56929:CDS | 55.0% | |
| ! | ACCGCTAACGGCTCTAGTTG+TGG | - | chr8.1:18677640-18677659 | MS.gene56929:CDS | 55.0% |
| ! | AGTGGGATTGGCAGGGAGAA+AGG | - | chr8.1:18679824-18679843 | MS.gene56929:intron | 55.0% |
| ! | CTTCACACTTTTGGGCAGGC+CGG | - | chr8.1:18677885-18677904 | MS.gene56929:CDS | 55.0% |
| ! | GTTGGACCAGCTCTAGCAAC+TGG | - | chr8.1:18677584-18677603 | MS.gene56929:intron | 55.0% |
| !! | AGATTGCAGCTCTGGAGGCA+TGG | - | chr8.1:18677248-18677267 | MS.gene56929:intron | 55.0% |
| !! | GCTCTGGAGGCATGGAACAA+TGG | - | chr8.1:18677256-18677275 | MS.gene56929:intron | 55.0% |
| !! | TTGATGCGAGCACTGAGAGC+TGG | - | chr8.1:18679737-18679756 | MS.gene56929:intron | 55.0% |
| CAGAACACCTGGGGGTAGAC+CGG | + | chr8.1:18677907-18677926 | None:intergenic | 60.0% | |
| CAGGGGCAATGTTGCTGTGC+TGG | - | chr8.1:18678615-18678634 | MS.gene56929:intron | 60.0% | |
| CGCGAGCTGCTGATACTGCA+CGG | + | chr8.1:18677035-18677054 | None:intergenic | 60.0% | |
| GCAATCACTTCCCCTGTGCG+TGG | + | chr8.1:18676979-18676998 | None:intergenic | 60.0% | |
| GGGTGTAGAGCAAGGTCCTC+AGG | - | chr8.1:18678734-18678753 | MS.gene56929:CDS | 60.0% | |
| TAGCACGGCTGCAGCTGTTG+AGG | - | chr8.1:18676678-18676697 | MS.gene56929:CDS | 60.0% | |
| TGCAGTATCAGCAGCTCGCG+AGG | - | chr8.1:18677035-18677054 | MS.gene56929:intron | 60.0% | |
| ! | GCAAGAGGTGCACCAGCAGT+TGG | + | chr8.1:18677951-18677970 | None:intergenic | 60.0% |
| GGGCTGACAGTCCCGGCTGA+TGG | - | chr8.1:18677470-18677489 | MS.gene56929:intron | 70.0% | |
| ! | GGGCAGGCCGGTCTACCCCC+AGG | - | chr8.1:18677897-18677916 | MS.gene56929:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 18676454 | 18679919 | 18676454 | ID=MS.gene56929 |
| chr8.1 | mRNA | 18676454 | 18679919 | 18676454 | ID=MS.gene56929.t1;Parent=MS.gene56929 |
| chr8.1 | exon | 18679829 | 18679919 | 18679829 | ID=MS.gene56929.t1.exon1;Parent=MS.gene56929.t1 |
| chr8.1 | CDS | 18679829 | 18679919 | 18679829 | ID=cds.MS.gene56929.t1;Parent=MS.gene56929.t1 |
| chr8.1 | exon | 18679598 | 18679732 | 18679598 | ID=MS.gene56929.t1.exon2;Parent=MS.gene56929.t1 |
| chr8.1 | CDS | 18679598 | 18679732 | 18679598 | ID=cds.MS.gene56929.t1;Parent=MS.gene56929.t1 |
| chr8.1 | exon | 18679278 | 18679420 | 18679278 | ID=MS.gene56929.t1.exon3;Parent=MS.gene56929.t1 |
| chr8.1 | CDS | 18679278 | 18679420 | 18679278 | ID=cds.MS.gene56929.t1;Parent=MS.gene56929.t1 |
| chr8.1 | exon | 18679027 | 18679180 | 18679027 | ID=MS.gene56929.t1.exon4;Parent=MS.gene56929.t1 |
| chr8.1 | CDS | 18679027 | 18679180 | 18679027 | ID=cds.MS.gene56929.t1;Parent=MS.gene56929.t1 |
| chr8.1 | exon | 18678694 | 18678923 | 18678694 | ID=MS.gene56929.t1.exon5;Parent=MS.gene56929.t1 |
| chr8.1 | CDS | 18678694 | 18678923 | 18678694 | ID=cds.MS.gene56929.t1;Parent=MS.gene56929.t1 |
| chr8.1 | exon | 18678381 | 18678470 | 18678381 | ID=MS.gene56929.t1.exon6;Parent=MS.gene56929.t1 |
| chr8.1 | CDS | 18678381 | 18678470 | 18678381 | ID=cds.MS.gene56929.t1;Parent=MS.gene56929.t1 |
| chr8.1 | exon | 18677842 | 18678015 | 18677842 | ID=MS.gene56929.t1.exon7;Parent=MS.gene56929.t1 |
| chr8.1 | CDS | 18677842 | 18678015 | 18677842 | ID=cds.MS.gene56929.t1;Parent=MS.gene56929.t1 |
| chr8.1 | exon | 18677618 | 18677755 | 18677618 | ID=MS.gene56929.t1.exon8;Parent=MS.gene56929.t1 |
| chr8.1 | CDS | 18677618 | 18677755 | 18677618 | ID=cds.MS.gene56929.t1;Parent=MS.gene56929.t1 |
| chr8.1 | exon | 18677272 | 18677409 | 18677272 | ID=MS.gene56929.t1.exon9;Parent=MS.gene56929.t1 |
| chr8.1 | CDS | 18677272 | 18677409 | 18677272 | ID=cds.MS.gene56929.t1;Parent=MS.gene56929.t1 |
| chr8.1 | exon | 18677112 | 18677173 | 18677112 | ID=MS.gene56929.t1.exon10;Parent=MS.gene56929.t1 |
| chr8.1 | CDS | 18677112 | 18677173 | 18677112 | ID=cds.MS.gene56929.t1;Parent=MS.gene56929.t1 |
| chr8.1 | exon | 18676454 | 18676727 | 18676454 | ID=MS.gene56929.t1.exon11;Parent=MS.gene56929.t1 |
| chr8.1 | CDS | 18676454 | 18676727 | 18676454 | ID=cds.MS.gene56929.t1;Parent=MS.gene56929.t1 |
| Gene Sequence |
| Protein sequence |
