Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066203.t1 | XP_024632514.1 | 97.2 | 538 | 14 | 1 | 1 | 538 | 1 | 537 | 4.00E-294 | 1020 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066203.t1 | Q9SAK4 | 75.7 | 534 | 123 | 1 | 4 | 537 | 1 | 527 | 8.9e-234 | 810.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066203.t1 | A0A396JH52 | 97.2 | 538 | 14 | 1 | 1 | 538 | 1 | 537 | 2.9e-294 | 1020.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066203.t1 | MTR_2g067660 | 94.932 | 513 | 23 | 1 | 29 | 538 | 10 | 522 | 0.0 | 994 |
MS.gene066203.t1 | MTR_3g078170 | 41.525 | 472 | 271 | 4 | 63 | 530 | 62 | 532 | 4.64e-110 | 338 |
MS.gene066203.t1 | MTR_4g107040 | 40.678 | 472 | 275 | 4 | 63 | 530 | 64 | 534 | 3.18e-107 | 331 |
MS.gene066203.t1 | MTR_3g078550 | 39.368 | 475 | 278 | 3 | 66 | 530 | 11 | 485 | 1.53e-106 | 328 |
MS.gene066203.t1 | MTR_4g106510 | 39.413 | 477 | 279 | 3 | 64 | 530 | 9 | 485 | 2.50e-106 | 328 |
MS.gene066203.t1 | MTR_3g078490 | 39.413 | 477 | 279 | 3 | 64 | 530 | 39 | 515 | 3.81e-106 | 328 |
MS.gene066203.t1 | MTR_8g064170 | 39.112 | 473 | 283 | 4 | 62 | 530 | 60 | 531 | 9.71e-102 | 317 |
MS.gene066203.t1 | MTR_3g078550 | 41.232 | 422 | 243 | 2 | 114 | 530 | 34 | 455 | 2.01e-101 | 314 |
MS.gene066203.t1 | MTR_8g083530 | 36.383 | 470 | 294 | 4 | 66 | 531 | 26 | 494 | 5.35e-99 | 309 |
MS.gene066203.t1 | MTR_6g086300 | 37.632 | 473 | 290 | 4 | 63 | 531 | 22 | 493 | 9.37e-98 | 305 |
MS.gene066203.t1 | MTR_6g086300 | 37.632 | 473 | 290 | 4 | 63 | 531 | 22 | 493 | 9.37e-98 | 305 |
MS.gene066203.t1 | MTR_6g086340 | 36.247 | 469 | 294 | 4 | 66 | 530 | 23 | 490 | 7.92e-93 | 293 |
MS.gene066203.t1 | MTR_3g078170 | 41.985 | 393 | 223 | 4 | 63 | 451 | 62 | 453 | 3.30e-91 | 287 |
MS.gene066203.t1 | MTR_8g083520 | 34.249 | 473 | 271 | 6 | 63 | 530 | 14 | 451 | 2.04e-84 | 270 |
MS.gene066203.t1 | MTR_3g078170 | 41.892 | 370 | 210 | 4 | 63 | 428 | 62 | 430 | 2.76e-82 | 263 |
MS.gene066203.t1 | MTR_3g078170 | 41.892 | 370 | 210 | 4 | 63 | 428 | 62 | 430 | 6.95e-82 | 263 |
MS.gene066203.t1 | MTR_8g064170 | 34.884 | 473 | 271 | 5 | 62 | 530 | 60 | 499 | 1.81e-81 | 263 |
MS.gene066203.t1 | MTR_8g083520 | 33.911 | 404 | 233 | 3 | 128 | 530 | 1 | 371 | 2.02e-73 | 238 |
MS.gene066203.t1 | MTR_1g014320 | 32.484 | 471 | 297 | 7 | 69 | 528 | 22 | 482 | 6.13e-73 | 241 |
MS.gene066203.t1 | MTR_4g131180 | 31.770 | 469 | 303 | 7 | 69 | 528 | 22 | 482 | 2.22e-72 | 239 |
MS.gene066203.t1 | MTR_1690s0010 | 40.483 | 331 | 191 | 4 | 66 | 392 | 12 | 340 | 9.04e-72 | 233 |
MS.gene066203.t1 | MTR_4g131180 | 32.102 | 433 | 278 | 6 | 69 | 493 | 22 | 446 | 5.19e-68 | 227 |
MS.gene066203.t1 | MTR_8g083530 | 37.771 | 323 | 196 | 4 | 66 | 384 | 26 | 347 | 2.37e-66 | 219 |
MS.gene066203.t1 | MTR_2g042330 | 29.878 | 492 | 330 | 8 | 44 | 525 | 1 | 487 | 4.62e-66 | 223 |
MS.gene066203.t1 | MTR_4g093170 | 31.237 | 477 | 317 | 7 | 62 | 530 | 41 | 514 | 1.61e-63 | 217 |
MS.gene066203.t1 | MTR_2g034160 | 30.297 | 472 | 304 | 9 | 77 | 530 | 63 | 527 | 1.74e-63 | 218 |
MS.gene066203.t1 | MTR_3g078490 | 35.965 | 342 | 211 | 2 | 64 | 397 | 9 | 350 | 4.15e-62 | 208 |
MS.gene066203.t1 | MTR_2g009750 | 30.833 | 480 | 322 | 7 | 58 | 530 | 10 | 486 | 5.89e-62 | 212 |
MS.gene066203.t1 | MTR_2g009750 | 30.561 | 481 | 323 | 7 | 58 | 530 | 10 | 487 | 2.10e-61 | 210 |
MS.gene066203.t1 | MTR_2g009750 | 30.515 | 485 | 327 | 7 | 53 | 530 | 4 | 485 | 4.46e-61 | 209 |
MS.gene066203.t1 | MTR_1399s0020 | 32.402 | 358 | 186 | 4 | 177 | 530 | 32 | 337 | 1.60e-50 | 177 |
MS.gene066203.t1 | MTR_8g094600 | 29.885 | 348 | 235 | 7 | 194 | 538 | 165 | 506 | 2.12e-41 | 156 |
MS.gene066203.t1 | MTR_2g097950 | 29.446 | 343 | 230 | 9 | 194 | 530 | 116 | 452 | 1.40e-40 | 154 |
MS.gene066203.t1 | MTR_1222s0010 | 33.067 | 375 | 233 | 10 | 104 | 473 | 10 | 371 | 2.09e-38 | 150 |
MS.gene066203.t1 | MTR_1g029840 | 28.744 | 414 | 276 | 11 | 128 | 531 | 42 | 446 | 2.26e-38 | 147 |
MS.gene066203.t1 | MTR_8g076480 | 29.940 | 334 | 225 | 8 | 194 | 524 | 105 | 432 | 1.41e-37 | 145 |
MS.gene066203.t1 | MTR_1g029840 | 28.329 | 413 | 277 | 11 | 128 | 530 | 42 | 445 | 2.29e-36 | 141 |
MS.gene066203.t1 | MTR_3g088150 | 28.824 | 340 | 233 | 8 | 194 | 530 | 114 | 447 | 2.51e-34 | 135 |
MS.gene066203.t1 | MTR_2g097950 | 27.647 | 340 | 207 | 8 | 194 | 531 | 116 | 418 | 2.70e-31 | 127 |
MS.gene066203.t1 | MTR_1314s0010 | 28.363 | 342 | 232 | 5 | 198 | 531 | 1 | 337 | 4.26e-31 | 124 |
MS.gene066203.t1 | MTR_4g065040 | 28.803 | 309 | 208 | 9 | 194 | 497 | 101 | 402 | 6.41e-28 | 117 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066203.t1 | AT1G79440 | 75.843 | 534 | 122 | 2 | 4 | 537 | 1 | 527 | 0.0 | 820 |
MS.gene066203.t1 | AT1G74920 | 40.580 | 483 | 277 | 3 | 64 | 536 | 9 | 491 | 1.26e-115 | 352 |
MS.gene066203.t1 | AT1G74920 | 41.201 | 483 | 269 | 5 | 64 | 536 | 9 | 486 | 7.89e-114 | 347 |
MS.gene066203.t1 | AT3G48170 | 37.996 | 479 | 287 | 3 | 62 | 530 | 7 | 485 | 1.47e-111 | 341 |
MS.gene066203.t1 | AT3G48000 | 39.429 | 525 | 298 | 6 | 25 | 530 | 5 | 528 | 3.08e-111 | 342 |
MS.gene066203.t1 | AT1G23800 | 39.958 | 473 | 279 | 4 | 62 | 530 | 53 | 524 | 2.25e-107 | 331 |
MS.gene066203.t1 | AT3G24503 | 39.286 | 476 | 281 | 5 | 63 | 532 | 20 | 493 | 7.08e-106 | 327 |
MS.gene066203.t1 | AT1G23800 | 41.896 | 327 | 185 | 4 | 62 | 384 | 53 | 378 | 6.91e-75 | 243 |
MS.gene066203.t1 | AT2G24270 | 32.484 | 471 | 297 | 9 | 69 | 528 | 22 | 482 | 3.66e-71 | 236 |
MS.gene066203.t1 | AT2G24270 | 32.484 | 471 | 297 | 9 | 69 | 528 | 22 | 482 | 3.66e-71 | 236 |
MS.gene066203.t1 | AT2G24270 | 32.484 | 471 | 297 | 9 | 69 | 528 | 22 | 482 | 4.03e-71 | 236 |
MS.gene066203.t1 | AT2G24270 | 32.484 | 471 | 297 | 9 | 69 | 528 | 62 | 522 | 5.88e-71 | 236 |
MS.gene066203.t1 | AT3G66658 | 32.432 | 481 | 292 | 11 | 72 | 530 | 58 | 527 | 2.03e-69 | 233 |
MS.gene066203.t1 | AT3G66658 | 32.903 | 465 | 279 | 11 | 72 | 514 | 58 | 511 | 4.81e-69 | 233 |
MS.gene066203.t1 | AT1G54100 | 30.901 | 466 | 311 | 6 | 67 | 525 | 25 | 486 | 2.50e-67 | 226 |
MS.gene066203.t1 | AT1G54100 | 30.901 | 466 | 311 | 6 | 67 | 525 | 25 | 486 | 2.50e-67 | 226 |
MS.gene066203.t1 | AT2G14170 | 31.237 | 477 | 317 | 7 | 62 | 530 | 4 | 477 | 4.77e-60 | 206 |
MS.gene066203.t1 | AT2G14170 | 31.027 | 477 | 318 | 7 | 62 | 530 | 113 | 586 | 4.27e-59 | 206 |
MS.gene066203.t1 | AT2G14170 | 31.350 | 437 | 292 | 5 | 62 | 493 | 113 | 546 | 4.32e-58 | 203 |
MS.gene066203.t1 | AT4G36250 | 29.345 | 351 | 236 | 9 | 194 | 538 | 104 | 448 | 4.59e-39 | 149 |
MS.gene066203.t1 | AT1G44170 | 29.023 | 348 | 238 | 7 | 194 | 538 | 45 | 386 | 1.10e-37 | 144 |
MS.gene066203.t1 | AT1G44170 | 27.529 | 425 | 289 | 10 | 124 | 538 | 34 | 449 | 2.12e-37 | 144 |
MS.gene066203.t1 | AT1G44170 | 27.529 | 425 | 289 | 10 | 124 | 538 | 34 | 449 | 2.12e-37 | 144 |
MS.gene066203.t1 | AT4G34240 | 29.226 | 349 | 236 | 7 | 194 | 538 | 29 | 370 | 4.27e-36 | 139 |
MS.gene066203.t1 | AT4G34240 | 29.226 | 349 | 236 | 7 | 194 | 538 | 171 | 512 | 1.42e-35 | 140 |
MS.gene066203.t1 | AT4G34240 | 29.226 | 349 | 236 | 7 | 194 | 538 | 156 | 497 | 1.55e-35 | 140 |
MS.gene066203.t1 | AT4G34240 | 30.137 | 219 | 147 | 5 | 194 | 411 | 171 | 384 | 7.00e-20 | 92.4 |
Find 128 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCTCCCAGCTTAACACTTC+TGG | 0.149958 | 2.2:+25481166 | MS.gene066203:CDS |
GCAGCTATGGCATACCTTTA+TGG | 0.187015 | 2.2:-25481248 | None:intergenic |
AGGAATTTGCATGAGAAAAT+TGG | 0.214581 | 2.2:-25479683 | None:intergenic |
ATATGGAATGGATGAATATT+TGG | 0.251337 | 2.2:+25490260 | MS.gene066203:CDS |
GAGGAGGCAAAACGTATATA+TGG | 0.286790 | 2.2:+25483265 | MS.gene066203:CDS |
TGAAACTAAACACACCTTTC+GGG | 0.299873 | 2.2:-25484066 | None:intergenic |
GGAAGAGAAGGTTCTAAATA+TGG | 0.316316 | 2.2:+25490243 | MS.gene066203:CDS |
TTTAAAATTCTAGGTATCTC+TGG | 0.329976 | 2.2:+25485306 | MS.gene066203:intron |
TACTGTTTGCAGATAGGTTA+TGG | 0.331414 | 2.2:+25483217 | MS.gene066203:intron |
TTGCAGCCTGTAGGGGTTGT+AGG | 0.332875 | 2.2:+25484005 | MS.gene066203:intron |
CACATGTTTGTCCACTATTA+CGG | 0.335591 | 2.2:-25486531 | None:intergenic |
CCTCCCAGCTTAACACTTCT+GGG | 0.348585 | 2.2:+25481167 | MS.gene066203:CDS |
GCTATAGATTCACCAGTTGC+TGG | 0.354096 | 2.2:-25481475 | None:intergenic |
ATGGGAAATGCTCCTGATAT+TGG | 0.359517 | 2.2:+25484933 | MS.gene066203:CDS |
CTTGGTGTTTGCAGCCTGTA+GGG | 0.360573 | 2.2:+25483997 | MS.gene066203:intron |
GTGGCTGAGGCTCTTGAATA+TGG | 0.363964 | 2.2:+25490062 | MS.gene066203:CDS |
GGGTGTTGTGAATGTGGTTA+TGG | 0.372415 | 2.2:+25484914 | MS.gene066203:intron |
AAAGCCTCTTAAAGAGTCTC+TGG | 0.372858 | 2.2:+25483092 | MS.gene066203:CDS |
TTCAAGGTATGATTTGCTAA+TGG | 0.374317 | 2.2:+25483026 | MS.gene066203:intron |
TGAGAACTCAAGGCCTCATT+GGG | 0.374732 | 2.2:+25481194 | MS.gene066203:CDS |
TCAGATCAAGTATGTCTGTC+TGG | 0.379564 | 2.2:+25490396 | MS.gene066203:intron |
ATTAAAGCGTCTCCAATATC+AGG | 0.394379 | 2.2:-25484945 | None:intergenic |
GTTAGCACAACTTATAACTT+TGG | 0.400254 | 2.2:+25483062 | MS.gene066203:CDS |
TACTCTAGACAGGAAGCATT+TGG | 0.403121 | 2.2:+25489772 | MS.gene066203:intron |
CTCTGATGCAAACTCAATAA+AGG | 0.403961 | 2.2:-25483245 | None:intergenic |
TCACCCAGAGACTCTTTAAG+AGG | 0.417656 | 2.2:-25483096 | None:intergenic |
TAGGTTTATAATCCAGCAAC+TGG | 0.428347 | 2.2:+25481463 | MS.gene066203:intron |
TTGAGAACTCAAGGCCTCAT+TGG | 0.437155 | 2.2:+25481193 | MS.gene066203:CDS |
CGCTTTAATCGCAAGTCCAC+AGG | 0.437860 | 2.2:+25484959 | MS.gene066203:CDS |
AGGAGGCAAAACGTATATAT+GGG | 0.459546 | 2.2:+25483266 | MS.gene066203:CDS |
TGATTTAGCATCGTGAATCA+AGG | 0.468574 | 2.2:-25487784 | None:intergenic |
ACGATCGTGGCGTGTGGCTG+AGG | 0.472255 | 2.2:+25490049 | MS.gene066203:CDS |
ATGATGCAGGTGGCTCCATT+TGG | 0.475659 | 2.2:+25490198 | MS.gene066203:intron |
TCTTGGTGTTTGCAGCCTGT+AGG | 0.476077 | 2.2:+25483996 | MS.gene066203:intron |
GCTCTTGAATATGGACTTGT+GGG | 0.482037 | 2.2:+25490071 | MS.gene066203:CDS |
TTTGGTGGAGTTAAACAGTC+TGG | 0.482571 | 2.2:+25490216 | MS.gene066203:CDS |
AACAGCATTACGCAATGCAT+TGG | 0.483260 | 2.2:-25487293 | None:intergenic |
GACTGTTTAACTCCACCAAA+TGG | 0.484011 | 2.2:-25490213 | None:intergenic |
AAATGGAGGGATGCTTATGA+TGG | 0.486463 | 2.2:+25481220 | MS.gene066203:CDS |
AATAGAATTCTTGTGCAAGA+AGG | 0.488408 | 2.2:+25486562 | MS.gene066203:CDS |
GTACATCCACATGCAAGGGC+TGG | 0.490689 | 2.2:-25484191 | None:intergenic |
GGTGTTGTGAATGTGGTTAT+GGG | 0.496796 | 2.2:+25484915 | MS.gene066203:CDS |
ACAGCCCAGAAGTGTTAAGC+TGG | 0.497862 | 2.2:-25481171 | None:intergenic |
GCTGTTCAAAGTATGAAAGT+TGG | 0.498422 | 2.2:+25487310 | MS.gene066203:CDS |
CTTTATTGAGTTTGCATCAG+AGG | 0.498643 | 2.2:+25483246 | MS.gene066203:CDS |
ATGCAGGTGGCTCCATTTGG+TGG | 0.500625 | 2.2:+25490201 | MS.gene066203:intron |
CAGATCAAGTATGTCTGTCT+GGG | 0.503024 | 2.2:+25490397 | MS.gene066203:intron |
TTCCTTTCACTGCAACATCC+AGG | 0.503148 | 2.2:-25485372 | None:intergenic |
CTCCGATCAGATAGAGGTGC+AGG | 0.506164 | 2.2:-25483298 | None:intergenic |
TTCTAGGTATCTCTGGAACT+TGG | 0.506384 | 2.2:+25485313 | MS.gene066203:intron |
GTGATGGCAGCAATGAAGTT+TGG | 0.507355 | 2.2:+25479586 | None:intergenic |
GGCTGTTGGAAAGAAATTGA+TGG | 0.508579 | 2.2:+25485092 | MS.gene066203:CDS |
ATGTAGCATGCATGGGTGGA+AGG | 0.509393 | 2.2:+25481500 | MS.gene066203:CDS |
TTTGAGATTCAAAACTGAAG+AGG | 0.510569 | 2.2:+25489810 | MS.gene066203:CDS |
TTCACTGGCTCAACGGCTGT+TGG | 0.510811 | 2.2:+25485078 | MS.gene066203:CDS |
AATCTCAAAAGGGGTGCGAC+AGG | 0.514227 | 2.2:-25489796 | None:intergenic |
GATTCACGATGCTAAATCAA+AGG | 0.516164 | 2.2:+25487788 | MS.gene066203:CDS |
GCAGCAAAGTTCCGTAATAG+TGG | 0.517940 | 2.2:+25486520 | MS.gene066203:CDS |
CAAAGTATGAAAGTTGGAGA+TGG | 0.518208 | 2.2:+25487316 | MS.gene066203:CDS |
AATAACCTCCGATCAGATAG+AGG | 0.522208 | 2.2:-25483304 | None:intergenic |
GATGTAGGGTGTTGTGAATG+TGG | 0.522853 | 2.2:+25484908 | MS.gene066203:intron |
AGAAGGTTCTAAATATGGAA+TGG | 0.527661 | 2.2:+25490248 | MS.gene066203:CDS |
GGACTTGTGGGTATTAATGA+AGG | 0.530917 | 2.2:+25490083 | MS.gene066203:CDS |
TATAGCAGATGTAGCATGCA+TGG | 0.532222 | 2.2:+25481492 | MS.gene066203:CDS |
CAGTCTGGCCTCGGAAGAGA+AGG | 0.539061 | 2.2:+25490231 | MS.gene066203:CDS |
GCAGAACTCTCTATTCAAGC+TGG | 0.539189 | 2.2:+25484263 | MS.gene066203:CDS |
GGCTCTTGAATATGGACTTG+TGG | 0.539232 | 2.2:+25490070 | MS.gene066203:CDS |
GTAAGGAAGATTACATTCAC+TGG | 0.539479 | 2.2:+25485063 | MS.gene066203:CDS |
GGAGTTAAACAGTCTGGCCT+CGG | 0.539521 | 2.2:+25490222 | MS.gene066203:CDS |
TACATCCACATGCAAGGGCT+GGG | 0.547179 | 2.2:-25484190 | None:intergenic |
GTCAGAGGCGTAAGTTCAGA+GGG | 0.555661 | 2.2:-25484227 | None:intergenic |
ACAATGAGATGGATATATCA+AGG | 0.560511 | 2.2:+25488444 | MS.gene066203:CDS |
CCTTGCTATGATTACCCGAA+AGG | 0.564376 | 2.2:+25484052 | MS.gene066203:CDS |
GATGGCAGGTTCTGCTGAGA+CGG | 0.565405 | 2.2:+25485110 | MS.gene066203:CDS |
TAGGTATCTCTGGAACTTGG+CGG | 0.565756 | 2.2:+25485316 | MS.gene066203:intron |
CACTGATGTCGACAATGAGA+TGG | 0.565903 | 2.2:+25488433 | MS.gene066203:CDS |
CAACTTATAACTTTGGAGCA+AGG | 0.568697 | 2.2:+25483069 | MS.gene066203:CDS |
ATTGCACCTACAACCCCTAC+AGG | 0.569640 | 2.2:-25484011 | None:intergenic |
TGGAATGGATGAATATTTGG+AGG | 0.569694 | 2.2:+25490263 | MS.gene066203:CDS |
TCTGGGCTGTTGAGAACTCA+AGG | 0.570477 | 2.2:+25481184 | MS.gene066203:CDS |
TGTAGCATGCATGGGTGGAA+GGG | 0.572076 | 2.2:+25481501 | MS.gene066203:CDS |
GAAGCGCCTTTGATGATGAT+CGG | 0.573760 | 2.2:-25479630 | None:intergenic |
AGTCAGAGGCGTAAGTTCAG+AGG | 0.574214 | 2.2:-25484228 | None:intergenic |
GTTGGCCCAGCCCTTGCATG+TGG | 0.577913 | 2.2:+25484185 | MS.gene066203:CDS |
GTTGGAAAGAAATTGATGGC+AGG | 0.579906 | 2.2:+25485096 | MS.gene066203:CDS |
TTGGTGTTTGCAGCCTGTAG+GGG | 0.580450 | 2.2:+25483998 | MS.gene066203:intron |
TCAGCCACACGCCACGATCG+TGG | 0.581123 | 2.2:-25490047 | None:intergenic |
CCACTGTACATCCACATGCA+AGG | 0.581961 | 2.2:-25484196 | None:intergenic |
CGCACTCCGATCATCATCAA+AGG | 0.583187 | 2.2:+25479624 | MS.gene066203:CDS |
ATTTAGAACCTTCTCTTCCG+AGG | 0.584358 | 2.2:-25490239 | None:intergenic |
ATTGCTAACGACACTAATGC+AGG | 0.584914 | 2.2:+25489844 | MS.gene066203:CDS |
TGAAGTTTGGTGGCAGCATG+AGG | 0.586648 | 2.2:+25479599 | MS.gene066203:CDS |
TTTACTCCGCTCAGAAGCAG+TGG | 0.587384 | 2.2:-25482310 | None:intergenic |
TCTTAAAGAGTCTCTGGGTG+AGG | 0.589178 | 2.2:+25483098 | MS.gene066203:CDS |
CTTTCGGGTAATCATAGCAA+GGG | 0.589186 | 2.2:-25484051 | None:intergenic |
CACTGTACATCCACATGCAA+GGG | 0.589620 | 2.2:-25484195 | None:intergenic |
GATCGTACCTTGCGAGTGAG+AGG | 0.593957 | 2.2:-25479703 | None:intergenic |
TATTGAGTTTGCATCAGAGG+AGG | 0.606237 | 2.2:+25483249 | MS.gene066203:CDS |
GATTACATTCACTGGCTCAA+CGG | 0.607378 | 2.2:+25485071 | MS.gene066203:CDS |
CAAACAGTATTCCACGATCG+TGG | 0.609981 | 2.2:+25490036 | MS.gene066203:CDS |
TTCCTGCACCTCTATCTGAT+CGG | 0.612764 | 2.2:+25483296 | MS.gene066203:CDS |
GCAGATGTAGCATGCATGGG+TGG | 0.613906 | 2.2:+25481496 | MS.gene066203:CDS |
CAGCCCAGAAGTGTTAAGCT+GGG | 0.614718 | 2.2:-25481170 | None:intergenic |
ACAGCAGCTTCATTGATCAG+AGG | 0.616503 | 2.2:-25487638 | None:intergenic |
GACCTGGATGTTGCAGTGAA+AGG | 0.620334 | 2.2:+25485370 | MS.gene066203:CDS |
GCAAATTCCTCTCACTCGCA+AGG | 0.622276 | 2.2:+25479696 | MS.gene066203:CDS |
AAGCCTCTTAAAGAGTCTCT+GGG | 0.626966 | 2.2:+25483093 | MS.gene066203:CDS |
GAACTCAAGGCCTCATTGGG+GGG | 0.631763 | 2.2:+25481197 | MS.gene066203:CDS |
TGAAGGAGTAATTTCAACAG+AGG | 0.634628 | 2.2:+25490100 | MS.gene066203:CDS |
CCTTTCGGGTAATCATAGCA+AGG | 0.637401 | 2.2:-25484052 | None:intergenic |
ATAGCAGATGTAGCATGCAT+GGG | 0.638114 | 2.2:+25481493 | MS.gene066203:CDS |
TCTATATGCATCAAAAGCAG+AGG | 0.639219 | 2.2:-25481542 | None:intergenic |
ATAGCAAGGGGAAAGTTCCA+AGG | 0.639924 | 2.2:-25484038 | None:intergenic |
GGAGGCAAAACGTATATATG+GGG | 0.645606 | 2.2:+25483267 | MS.gene066203:CDS |
ATGGCAGCAATGAAGTTTGG+TGG | 0.647612 | 2.2:+25479589 | MS.gene066203:CDS |
TCGACATCAGTGATGACTGT+TGG | 0.647888 | 2.2:-25488422 | None:intergenic |
TATTCCACGATCGTGGCGTG+TGG | 0.650377 | 2.2:+25490043 | MS.gene066203:CDS |
AGAACTCAAGGCCTCATTGG+GGG | 0.652654 | 2.2:+25481196 | MS.gene066203:CDS |
CTGCACCTCTATCTGATCGG+AGG | 0.653878 | 2.2:+25483299 | MS.gene066203:CDS |
TTGTAGGTGCAATTACACCT+TGG | 0.661704 | 2.2:+25484021 | MS.gene066203:CDS |
CCCAGAAGTGTTAAGCTGGG+AGG | 0.664415 | 2.2:-25481167 | None:intergenic |
TATTCAAGCTGGAATACCTG+AGG | 0.671846 | 2.2:+25484274 | MS.gene066203:CDS |
GCTGCAGCTAAAGCAGTCAG+AGG | 0.682197 | 2.2:-25484242 | None:intergenic |
GCAAAACCACTGCTTCTGAG+CGG | 0.689500 | 2.2:+25482304 | MS.gene066203:CDS |
TTTCGGGTAATCATAGCAAG+GGG | 0.694343 | 2.2:-25484050 | None:intergenic |
GAGAACTCAAGGCCTCATTG+GGG | 0.696722 | 2.2:+25481195 | MS.gene066203:CDS |
GGGGCAAAAGTTATTCTTGG+GGG | 0.708930 | 2.2:+25488365 | MS.gene066203:CDS |
CCTTGCATGTGGATGTACAG+TGG | 0.720118 | 2.2:+25484196 | MS.gene066203:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 25479589 | 25490438 | 25479589 | ID=MS.gene066203 |
chr2.2 | mRNA | 25479589 | 25490438 | 25479589 | ID=MS.gene066203.t1;Parent=MS.gene066203 |
chr2.2 | exon | 25479589 | 25479717 | 25479589 | ID=MS.gene066203.t1.exon1;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25479589 | 25479717 | 25479589 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25481142 | 25481255 | 25481142 | ID=MS.gene066203.t1.exon2;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25481142 | 25481255 | 25481142 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25481466 | 25481565 | 25481466 | ID=MS.gene066203.t1.exon3;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25481466 | 25481565 | 25481466 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25482298 | 25482346 | 25482298 | ID=MS.gene066203.t1.exon4;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25482298 | 25482346 | 25482298 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25483032 | 25483119 | 25483032 | ID=MS.gene066203.t1.exon5;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25483032 | 25483119 | 25483032 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25483229 | 25483339 | 25483229 | ID=MS.gene066203.t1.exon6;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25483229 | 25483339 | 25483229 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25484011 | 25484073 | 25484011 | ID=MS.gene066203.t1.exon7;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25484011 | 25484073 | 25484011 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25484185 | 25484295 | 25484185 | ID=MS.gene066203.t1.exon8;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25484185 | 25484295 | 25484185 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25484915 | 25484980 | 25484915 | ID=MS.gene066203.t1.exon9;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25484915 | 25484980 | 25484915 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25485063 | 25485140 | 25485063 | ID=MS.gene066203.t1.exon10;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25485063 | 25485140 | 25485063 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25485319 | 25485396 | 25485319 | ID=MS.gene066203.t1.exon11;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25485319 | 25485396 | 25485319 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25486517 | 25486583 | 25486517 | ID=MS.gene066203.t1.exon12;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25486517 | 25486583 | 25486517 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25487275 | 25487360 | 25487275 | ID=MS.gene066203.t1.exon13;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25487275 | 25487360 | 25487275 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25487635 | 25487667 | 25487635 | ID=MS.gene066203.t1.exon14;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25487635 | 25487667 | 25487635 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25487777 | 25487809 | 25487777 | ID=MS.gene066203.t1.exon15;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25487777 | 25487809 | 25487777 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25488365 | 25488465 | 25488365 | ID=MS.gene066203.t1.exon16;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25488365 | 25488465 | 25488365 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25489780 | 25489865 | 25489780 | ID=MS.gene066203.t1.exon17;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25489780 | 25489865 | 25489780 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25490015 | 25490121 | 25490015 | ID=MS.gene066203.t1.exon18;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25490015 | 25490121 | 25490015 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25490207 | 25490284 | 25490207 | ID=MS.gene066203.t1.exon19;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25490207 | 25490284 | 25490207 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
chr2.2 | exon | 25490400 | 25490438 | 25490400 | ID=MS.gene066203.t1.exon20;Parent=MS.gene066203.t1 |
chr2.2 | CDS | 25490400 | 25490438 | 25490400 | ID=cds.MS.gene066203.t1;Parent=MS.gene066203.t1 |
Gene Sequence |
Protein sequence |