Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04769.t1 | RHN43692.1 | 99 | 494 | 5 | 0 | 1 | 494 | 1 | 494 | 8.50E-283 | 982.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04769.t1 | Q56YU0 | 70.5 | 499 | 141 | 2 | 2 | 494 | 3 | 501 | 2.0e-208 | 726.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04769.t1 | A0A396GRB8 | 99.0 | 494 | 5 | 0 | 1 | 494 | 1 | 494 | 6.2e-283 | 982.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04769.t1 | MTR_8g083520 | 92.510 | 494 | 4 | 1 | 1 | 494 | 1 | 461 | 0.0 | 923 |
MS.gene04769.t1 | MTR_8g083530 | 85.802 | 486 | 69 | 0 | 9 | 494 | 18 | 503 | 0.0 | 873 |
MS.gene04769.t1 | MTR_6g086300 | 85.597 | 486 | 70 | 0 | 9 | 494 | 17 | 502 | 0.0 | 859 |
MS.gene04769.t1 | MTR_6g086300 | 85.597 | 486 | 70 | 0 | 9 | 494 | 17 | 502 | 0.0 | 859 |
MS.gene04769.t1 | MTR_6g086340 | 79.518 | 498 | 97 | 1 | 2 | 494 | 3 | 500 | 0.0 | 823 |
MS.gene04769.t1 | MTR_8g083520 | 91.787 | 414 | 1 | 1 | 81 | 494 | 1 | 381 | 0.0 | 768 |
MS.gene04769.t1 | MTR_4g107040 | 55.876 | 485 | 214 | 0 | 10 | 494 | 60 | 544 | 0.0 | 583 |
MS.gene04769.t1 | MTR_8g083530 | 85.152 | 330 | 49 | 0 | 9 | 338 | 18 | 347 | 0.0 | 583 |
MS.gene04769.t1 | MTR_3g078170 | 57.025 | 484 | 208 | 0 | 11 | 494 | 59 | 542 | 0.0 | 582 |
MS.gene04769.t1 | MTR_8g064170 | 55.601 | 491 | 218 | 0 | 4 | 494 | 51 | 541 | 0.0 | 579 |
MS.gene04769.t1 | MTR_8g064170 | 51.731 | 491 | 205 | 1 | 4 | 494 | 51 | 509 | 0.0 | 530 |
MS.gene04769.t1 | MTR_3g078170 | 55.276 | 398 | 178 | 0 | 11 | 408 | 59 | 456 | 7.96e-160 | 461 |
MS.gene04769.t1 | MTR_3g078170 | 54.960 | 373 | 168 | 0 | 11 | 383 | 59 | 431 | 2.57e-147 | 428 |
MS.gene04769.t1 | MTR_3g078170 | 54.960 | 373 | 168 | 0 | 11 | 383 | 59 | 431 | 4.08e-147 | 429 |
MS.gene04769.t1 | MTR_3g078550 | 41.176 | 493 | 279 | 5 | 10 | 493 | 4 | 494 | 1.10e-118 | 358 |
MS.gene04769.t1 | MTR_4g106510 | 41.463 | 492 | 277 | 5 | 11 | 493 | 5 | 494 | 6.46e-117 | 353 |
MS.gene04769.t1 | MTR_3g078490 | 40.491 | 489 | 278 | 6 | 15 | 493 | 39 | 524 | 1.51e-115 | 351 |
MS.gene04769.t1 | MTR_3g078550 | 41.578 | 469 | 259 | 6 | 34 | 493 | 2 | 464 | 2.05e-112 | 341 |
MS.gene04769.t1 | MTR_2g067660 | 37.342 | 474 | 288 | 6 | 14 | 484 | 47 | 514 | 2.70e-101 | 314 |
MS.gene04769.t1 | MTR_1690s0010 | 41.860 | 344 | 195 | 4 | 15 | 356 | 10 | 350 | 6.06e-83 | 261 |
MS.gene04769.t1 | MTR_3g078490 | 39.286 | 336 | 193 | 5 | 15 | 342 | 9 | 341 | 6.00e-66 | 217 |
MS.gene04769.t1 | MTR_2g009750 | 31.818 | 484 | 300 | 14 | 17 | 484 | 18 | 487 | 9.03e-57 | 197 |
MS.gene04769.t1 | MTR_2g009750 | 31.677 | 483 | 301 | 14 | 17 | 484 | 18 | 486 | 3.47e-56 | 195 |
MS.gene04769.t1 | MTR_2g009750 | 31.677 | 483 | 301 | 14 | 17 | 484 | 17 | 485 | 4.01e-56 | 195 |
MS.gene04769.t1 | MTR_4g093170 | 32.231 | 484 | 298 | 14 | 17 | 484 | 45 | 514 | 4.66e-56 | 196 |
MS.gene04769.t1 | MTR_1g014320 | 28.807 | 486 | 322 | 10 | 17 | 489 | 19 | 493 | 7.80e-56 | 194 |
MS.gene04769.t1 | MTR_2g034160 | 29.132 | 484 | 301 | 15 | 27 | 485 | 62 | 528 | 3.43e-55 | 194 |
MS.gene04769.t1 | MTR_4g131180 | 28.750 | 480 | 322 | 9 | 15 | 485 | 17 | 485 | 2.23e-54 | 190 |
MS.gene04769.t1 | MTR_4g131180 | 28.918 | 453 | 302 | 9 | 15 | 458 | 17 | 458 | 7.92e-51 | 180 |
MS.gene04769.t1 | MTR_2g042330 | 27.629 | 485 | 330 | 14 | 17 | 491 | 25 | 498 | 7.93e-51 | 181 |
MS.gene04769.t1 | MTR_1399s0020 | 28.226 | 372 | 215 | 4 | 113 | 482 | 14 | 335 | 9.13e-36 | 136 |
MS.gene04769.t1 | MTR_8g076480 | 29.155 | 343 | 229 | 9 | 148 | 485 | 106 | 439 | 5.62e-30 | 122 |
MS.gene04769.t1 | MTR_1g029840 | 27.778 | 396 | 254 | 15 | 100 | 485 | 73 | 446 | 5.38e-28 | 117 |
MS.gene04769.t1 | MTR_1g029840 | 27.665 | 394 | 253 | 15 | 102 | 485 | 75 | 446 | 2.71e-27 | 115 |
MS.gene04769.t1 | MTR_8g094600 | 26.571 | 350 | 247 | 7 | 145 | 491 | 163 | 505 | 2.89e-27 | 115 |
MS.gene04769.t1 | MTR_2g097950 | 27.293 | 447 | 275 | 17 | 77 | 493 | 42 | 468 | 3.82e-27 | 114 |
MS.gene04769.t1 | MTR_3g088150 | 27.566 | 341 | 233 | 8 | 150 | 485 | 117 | 448 | 2.44e-25 | 109 |
MS.gene04769.t1 | MTR_1222s0010 | 32.959 | 267 | 156 | 11 | 150 | 410 | 105 | 354 | 1.19e-23 | 105 |
MS.gene04769.t1 | MTR_1314s0010 | 26.608 | 342 | 237 | 6 | 151 | 484 | 1 | 336 | 1.75e-23 | 102 |
MS.gene04769.t1 | MTR_4g065040 | 28.526 | 312 | 202 | 9 | 145 | 447 | 99 | 398 | 4.34e-22 | 99.4 |
MS.gene04769.t1 | MTR_2g097950 | 25.935 | 428 | 255 | 15 | 77 | 489 | 42 | 422 | 9.43e-22 | 98.2 |
MS.gene04769.t1 | MTR_1g071870 | 78.571 | 42 | 9 | 0 | 436 | 477 | 227 | 268 | 1.24e-16 | 82.4 |
MS.gene04769.t1 | MTR_0002s0820 | 43.023 | 86 | 42 | 1 | 213 | 291 | 58 | 143 | 4.67e-12 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04769.t1 | AT3G24503 | 70.541 | 499 | 141 | 2 | 2 | 494 | 3 | 501 | 0.0 | 742 |
MS.gene04769.t1 | AT3G48000 | 56.327 | 490 | 214 | 0 | 5 | 494 | 49 | 538 | 0.0 | 585 |
MS.gene04769.t1 | AT1G23800 | 55.992 | 484 | 213 | 0 | 11 | 494 | 51 | 534 | 0.0 | 576 |
MS.gene04769.t1 | AT3G48170 | 42.799 | 493 | 271 | 6 | 10 | 493 | 4 | 494 | 9.39e-133 | 394 |
MS.gene04769.t1 | AT1G74920 | 42.008 | 488 | 272 | 5 | 15 | 493 | 9 | 494 | 9.55e-130 | 386 |
MS.gene04769.t1 | AT1G74920 | 42.008 | 488 | 267 | 6 | 15 | 493 | 9 | 489 | 2.97e-128 | 382 |
MS.gene04769.t1 | AT1G23800 | 54.878 | 328 | 148 | 0 | 11 | 338 | 51 | 378 | 4.82e-127 | 376 |
MS.gene04769.t1 | AT1G79440 | 38.397 | 474 | 283 | 7 | 14 | 484 | 53 | 520 | 1.76e-98 | 306 |
MS.gene04769.t1 | AT2G14170 | 32.917 | 480 | 300 | 12 | 17 | 484 | 8 | 477 | 1.42e-63 | 215 |
MS.gene04769.t1 | AT2G14170 | 32.848 | 481 | 301 | 12 | 17 | 485 | 117 | 587 | 1.60e-62 | 214 |
MS.gene04769.t1 | AT2G14170 | 33.551 | 459 | 282 | 11 | 17 | 460 | 117 | 567 | 3.74e-62 | 213 |
MS.gene04769.t1 | AT2G24270 | 29.412 | 493 | 316 | 11 | 15 | 490 | 17 | 494 | 2.58e-57 | 198 |
MS.gene04769.t1 | AT2G24270 | 29.412 | 493 | 316 | 11 | 15 | 490 | 17 | 494 | 2.58e-57 | 198 |
MS.gene04769.t1 | AT2G24270 | 29.412 | 493 | 316 | 11 | 15 | 490 | 17 | 494 | 3.72e-57 | 198 |
MS.gene04769.t1 | AT2G24270 | 29.412 | 493 | 316 | 11 | 15 | 490 | 57 | 534 | 9.28e-57 | 197 |
MS.gene04769.t1 | AT3G66658 | 28.958 | 480 | 307 | 10 | 27 | 485 | 62 | 528 | 2.00e-55 | 194 |
MS.gene04769.t1 | AT3G66658 | 28.958 | 480 | 307 | 10 | 27 | 485 | 62 | 528 | 5.07e-55 | 194 |
MS.gene04769.t1 | AT1G54100 | 28.274 | 481 | 310 | 15 | 27 | 489 | 32 | 495 | 7.62e-52 | 184 |
MS.gene04769.t1 | AT1G54100 | 28.274 | 481 | 310 | 15 | 27 | 489 | 32 | 495 | 7.62e-52 | 184 |
MS.gene04769.t1 | AT1G44170 | 29.360 | 344 | 223 | 11 | 150 | 485 | 48 | 379 | 8.02e-29 | 118 |
MS.gene04769.t1 | AT1G44170 | 29.226 | 349 | 227 | 11 | 145 | 485 | 106 | 442 | 1.33e-28 | 119 |
MS.gene04769.t1 | AT1G44170 | 29.226 | 349 | 227 | 11 | 145 | 485 | 106 | 442 | 1.33e-28 | 119 |
MS.gene04769.t1 | AT4G36250 | 28.280 | 343 | 231 | 9 | 150 | 485 | 107 | 441 | 4.04e-26 | 111 |
MS.gene04769.t1 | AT4G34240 | 28.814 | 354 | 222 | 13 | 145 | 485 | 27 | 363 | 1.10e-21 | 97.4 |
MS.gene04769.t1 | AT4G34240 | 28.895 | 353 | 223 | 13 | 145 | 485 | 169 | 505 | 3.24e-21 | 97.4 |
MS.gene04769.t1 | AT4G34240 | 28.895 | 353 | 223 | 13 | 145 | 485 | 154 | 490 | 3.25e-21 | 97.1 |
Find 114 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGTTTAGGTTAGCTTTAC+TGG | 0.158296 | 4.2:-2089862 | MS.gene04769:intron |
TTATGCTCATCTAGCTAAAT+TGG | 0.180635 | 4.2:-2090449 | MS.gene04769:intron |
ATGGTGGGTTCGCCATTAAC+TGG | 0.183711 | 4.2:+2095755 | None:intergenic |
GCTATAACCTCTCCTGTTCT+TGG | 0.187395 | 4.2:+2094957 | None:intergenic |
AGTGGATTTGGAAGAGATTA+TGG | 0.207893 | 4.2:-2088274 | MS.gene04769:CDS |
TTTGGAGATGATATTCCTTT+TGG | 0.217459 | 4.2:-2088310 | MS.gene04769:CDS |
AAACATGTTTCACTTGAATT+AGG | 0.225411 | 4.2:-2089787 | MS.gene04769:CDS |
TTATATATTCACCTTTATAT+TGG | 0.237820 | 4.2:+2089013 | None:intergenic |
GAAATATAACCTTGTTAAAT+AGG | 0.238871 | 4.2:+2089692 | None:intergenic |
TGAGGTCCTTGCTGAACTTT+AGG | 0.248573 | 4.2:+2089480 | None:intergenic |
CCATTCGTGCAGGCACAATT+TGG | 0.267251 | 4.2:-2088351 | MS.gene04769:CDS |
ACTACTTGTTTAGGATGATA+TGG | 0.268353 | 4.2:-2088919 | MS.gene04769:intron |
ATAGCACAGGATGAAATATT+TGG | 0.269039 | 4.2:-2088894 | MS.gene04769:CDS |
AGCAACATCAATGTCTTCTT+TGG | 0.289041 | 4.2:+2094917 | None:intergenic |
AGTGCTAACAATACAAGATA+TGG | 0.290148 | 4.2:-2088430 | MS.gene04769:CDS |
TGGTATTGTGACAAAGAATT+TGG | 0.301529 | 4.2:-2088398 | MS.gene04769:CDS |
GGATATAAAATGAGTGGATT+TGG | 0.311802 | 4.2:-2088286 | MS.gene04769:CDS |
GCTACTGAACTTGCTCTATT+AGG | 0.315875 | 4.2:-2089718 | MS.gene04769:CDS |
GAGCCAGGGAGAATTATAAA+TGG | 0.317372 | 4.2:+2088204 | None:intergenic |
AAGATGAATGGCCCAGTTAA+TGG | 0.318772 | 4.2:-2095767 | MS.gene04769:CDS |
GAGAGAGGTGTTTGCTCAGC+AGG | 0.319632 | 4.2:+2090481 | None:intergenic |
TTTACTGGTTCAACACAAAC+TGG | 0.322272 | 4.2:-2089847 | MS.gene04769:CDS |
ACCAGCAGTTGCTCCGAATC+CGG | 0.339951 | 4.2:+2090153 | None:intergenic |
TGCTGAACTTTAGGATCAAA+TGG | 0.343132 | 4.2:+2089489 | None:intergenic |
GTTAGCCCTTGCTTAGCTGC+TGG | 0.345001 | 4.2:-2090523 | MS.gene04769:CDS |
TTTATATTGGAGAAAATTGT+TGG | 0.380723 | 4.2:+2089026 | None:intergenic |
GGTCCTTGGCCCCGCCTGCC+CGG | 0.394609 | 4.2:-2094864 | MS.gene04769:CDS |
TTAGCCCTTGCTTAGCTGCT+GGG | 0.398006 | 4.2:-2090522 | MS.gene04769:CDS |
CAGCATCATCAAATATTATG+AGG | 0.415077 | 4.2:+2089752 | None:intergenic |
CACTTCCCTCTTCTTTGTCA+AGG | 0.428397 | 4.2:-2090545 | MS.gene04769:CDS |
ATGCATTTGACTTTGGTCCT+TGG | 0.433170 | 4.2:-2094878 | MS.gene04769:CDS |
ATGGAACCAATTGGTGTTGT+TGG | 0.438876 | 4.2:-2090592 | MS.gene04769:CDS |
AAAACTTATGATGAAATTTG+CGG | 0.440545 | 4.2:-2090803 | MS.gene04769:CDS |
CCAAATTGTGCCTGCACGAA+TGG | 0.447563 | 4.2:+2088351 | None:intergenic |
ACTACATTGATCACTCCATC+TGG | 0.447836 | 4.2:+2090178 | None:intergenic |
AAGTTCACGTGTGTTTGTTC+AGG | 0.454578 | 4.2:-2089577 | MS.gene04769:CDS |
GTACAACTTTCCTGCATCAA+TGG | 0.455022 | 4.2:+2090738 | None:intergenic |
ATCAATGTAGTACCCGGATT+CGG | 0.456367 | 4.2:-2090166 | MS.gene04769:CDS |
TGTCAAGAGCCTTACACATA+TGG | 0.456712 | 4.2:+2090716 | None:intergenic |
GCACCGGGCAGGCGGGGCCA+AGG | 0.457014 | 4.2:+2094861 | None:intergenic |
AGACATTGATGTTGCTGTAA+AGG | 0.460480 | 4.2:-2094910 | MS.gene04769:CDS |
GCACGTAATGCATTTGACTT+TGG | 0.466490 | 4.2:-2094885 | MS.gene04769:CDS |
GGAGCAGCTGATAAAATTCA+TGG | 0.471857 | 4.2:-2090658 | MS.gene04769:CDS |
CCCGGATTCGGAGCAACTGC+TGG | 0.474810 | 4.2:-2090154 | MS.gene04769:CDS |
CCAGCAGTTGCTCCGAATCC+GGG | 0.478102 | 4.2:+2090154 | None:intergenic |
CATGTTTCACTTGAATTAGG+AGG | 0.483839 | 4.2:-2089784 | MS.gene04769:CDS |
GTGCTAACAATACAAGATAT+GGG | 0.488510 | 4.2:-2088429 | MS.gene04769:CDS |
ACATACAGCACCGGGCAGGC+GGG | 0.489116 | 4.2:+2094854 | None:intergenic |
GTTCTTTCATATATAGAGCA+TGG | 0.490459 | 4.2:-2089116 | MS.gene04769:CDS |
GAAACAATAGATCCAAGAAC+AGG | 0.490822 | 4.2:-2094969 | MS.gene04769:CDS |
CTCCCATTTATAATTCTCCC+TGG | 0.490969 | 4.2:-2088207 | MS.gene04769:CDS |
ATGTGTCCAACAACACCAAT+TGG | 0.491867 | 4.2:+2090586 | None:intergenic |
AGAGTTAAATACTTAGAGCC+AGG | 0.492430 | 4.2:+2088189 | None:intergenic |
GCACTTGATGCCATTGATGC+AGG | 0.494942 | 4.2:-2090748 | MS.gene04769:CDS |
GGATGATATGGTTATAGCAC+AGG | 0.498812 | 4.2:-2088907 | MS.gene04769:CDS |
CACGTGTGTTTGTTCAGGAA+GGG | 0.500190 | 4.2:-2089572 | MS.gene04769:CDS |
TTGTTGGACACATTATTCCT+TGG | 0.504795 | 4.2:-2090576 | MS.gene04769:CDS |
AACATACAGCACCGGGCAGG+CGG | 0.509641 | 4.2:+2094853 | None:intergenic |
ATCTCCATCGATGAAAAGCT+TGG | 0.513198 | 4.2:+2095724 | None:intergenic |
AGCCAGGGAGAATTATAAAT+GGG | 0.513280 | 4.2:+2088205 | None:intergenic |
GAAAAGCTTGGTGAACTTGA+TGG | 0.514257 | 4.2:+2095736 | None:intergenic |
AAAGTTGTACCATATGTGTA+AGG | 0.520757 | 4.2:-2090725 | MS.gene04769:CDS |
AGCATCATCAAATATTATGA+GGG | 0.523550 | 4.2:+2089753 | None:intergenic |
CATACAGCACCGGGCAGGCG+GGG | 0.524560 | 4.2:+2094855 | None:intergenic |
ACAAGATATGGGCTAGCAGC+TGG | 0.529722 | 4.2:-2088418 | MS.gene04769:CDS |
CTCAGCAGGTTTGACGACCA+TGG | 0.533354 | 4.2:+2090495 | None:intergenic |
GCTGAACTTTAGGATCAAAT+GGG | 0.536539 | 4.2:+2089490 | None:intergenic |
TGGTGGGTTCGCCATTAACT+GGG | 0.536645 | 4.2:+2095756 | None:intergenic |
TTCTTTCATATATAGAGCAT+GGG | 0.537273 | 4.2:-2089115 | MS.gene04769:CDS |
AACTTCTTCAGTGCCATCAC+AGG | 0.541934 | 4.2:+2088870 | None:intergenic |
GTGCACCCAGCAGCTAAGCA+AGG | 0.542739 | 4.2:+2090517 | None:intergenic |
TTTGGAGGATATAAAATGAG+TGG | 0.544876 | 4.2:-2088292 | MS.gene04769:CDS |
TGTGAATAACAGGACTATTG+AGG | 0.547363 | 4.2:-2088464 | MS.gene04769:intron |
TAACTTGTAGATACTTGTGA+AGG | 0.547643 | 4.2:+2088242 | None:intergenic |
AATACACTACGTTACTATGC+AGG | 0.548118 | 4.2:-2090679 | MS.gene04769:CDS |
GAGTTAAATACTTAGAGCCA+GGG | 0.548477 | 4.2:+2088190 | None:intergenic |
TCACGTGTGTTTGTTCAGGA+AGG | 0.548974 | 4.2:-2089573 | MS.gene04769:CDS |
CTTGACAAAGAAGAGGGAAG+TGG | 0.553005 | 4.2:+2090546 | None:intergenic |
GTTCCATGCTTATACACTGA+TGG | 0.554675 | 4.2:-2090611 | MS.gene04769:CDS |
CTACCAAACACAAAGATGAA+TGG | 0.556268 | 4.2:-2095779 | None:intergenic |
GATAAAATAACATACAGCAC+CGG | 0.561462 | 4.2:+2094845 | None:intergenic |
GTGTCAAGATCCATTCGTGC+AGG | 0.571141 | 4.2:-2088361 | MS.gene04769:CDS |
TTGTAGGCTGGAATCCCAGA+TGG | 0.571524 | 4.2:-2090193 | MS.gene04769:intron |
ACGTAGTGTATTTGCTGCTG+AGG | 0.575685 | 4.2:+2090690 | None:intergenic |
GGTAAAACAGTGGGAAACAA+AGG | 0.577494 | 4.2:-2089062 | MS.gene04769:CDS |
AACTTGTAGATACTTGTGAA+GGG | 0.578412 | 4.2:+2088243 | None:intergenic |
TATACACTGATGGAACCAAT+TGG | 0.584584 | 4.2:-2090601 | MS.gene04769:CDS |
TTGACAAAGAAGAGGGAAGT+GGG | 0.590350 | 4.2:+2090547 | None:intergenic |
TGAAATATTTGGTCCTGTGA+TGG | 0.591352 | 4.2:-2088883 | MS.gene04769:CDS |
GTTCCATCAGTGTATAAGCA+TGG | 0.592583 | 4.2:+2090608 | None:intergenic |
ATAGAGCATGGGAAGAGAGA+AGG | 0.592698 | 4.2:-2089104 | MS.gene04769:CDS |
ATAAAATAACATACAGCACC+GGG | 0.596215 | 4.2:+2094846 | None:intergenic |
AATAACATACAGCACCGGGC+AGG | 0.601462 | 4.2:+2094850 | None:intergenic |
ATTAGGCATCCTATTTAACA+AGG | 0.602001 | 4.2:-2089701 | MS.gene04769:intron |
TGCTGCAGTGAGCTCACACA+TGG | 0.602550 | 4.2:-2090131 | MS.gene04769:CDS |
TGCACCCAGCAGCTAAGCAA+GGG | 0.604779 | 4.2:+2090518 | None:intergenic |
TTACTGGTTCAACACAAACT+GGG | 0.605518 | 4.2:-2089846 | MS.gene04769:CDS |
GTTATAGCAAGGATTAGCGA+AGG | 0.605769 | 4.2:-2094942 | MS.gene04769:CDS |
CTACATTGATCACTCCATCT+GGG | 0.608178 | 4.2:+2090179 | None:intergenic |
AGCTGATAAAATTCATGGAG+AGG | 0.609468 | 4.2:-2090653 | MS.gene04769:CDS |
CTTAGCTGCTGGGTGCACCA+TGG | 0.612100 | 4.2:-2090512 | MS.gene04769:CDS |
AGCTTGGTGAACTTGATGGT+GGG | 0.613775 | 4.2:+2095740 | None:intergenic |
GGCTAACCTTGACAAAGAAG+AGG | 0.614370 | 4.2:+2090539 | None:intergenic |
GCTAACCTTGACAAAGAAGA+GGG | 0.616886 | 4.2:+2090540 | None:intergenic |
GCATAAAACAAAGCAGAGAG+AGG | 0.624540 | 4.2:+2090466 | None:intergenic |
CGTAGTGTATTTGCTGCTGA+GGG | 0.627566 | 4.2:+2090691 | None:intergenic |
AGGGAAGTGGGAAAATTCCA+AGG | 0.632041 | 4.2:+2090559 | None:intergenic |
AAGCTTGGTGAACTTGATGG+TGG | 0.643041 | 4.2:+2095739 | None:intergenic |
GAACAGGAGAGGTTATAGCA+AGG | 0.648276 | 4.2:-2094953 | MS.gene04769:CDS |
AATAGATCCAAGAACAGGAG+AGG | 0.651958 | 4.2:-2094964 | MS.gene04769:CDS |
GGAGTGATCAATGTAGTACC+CGG | 0.657166 | 4.2:-2090172 | MS.gene04769:CDS |
TTTGATCCTAAAGTTCAGCA+AGG | 0.663779 | 4.2:-2089486 | MS.gene04769:CDS |
GCATCATCAAATATTATGAG+GGG | 0.673792 | 4.2:+2089754 | None:intergenic |
CTCACACATGGACATTGATG+CGG | 0.684513 | 4.2:-2090119 | MS.gene04769:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 2088201 | 2095786 | 2088201 | ID=MS.gene04769 |
chr4.2 | mRNA | 2088201 | 2095786 | 2088201 | ID=MS.gene04769.t1;Parent=MS.gene04769 |
chr4.2 | exon | 2095705 | 2095786 | 2095705 | ID=MS.gene04769.t1.exon1;Parent=MS.gene04769.t1 |
chr4.2 | CDS | 2095705 | 2095786 | 2095705 | ID=cds.MS.gene04769.t1;Parent=MS.gene04769.t1 |
chr4.2 | exon | 2094860 | 2095002 | 2094860 | ID=MS.gene04769.t1.exon2;Parent=MS.gene04769.t1 |
chr4.2 | CDS | 2094860 | 2095002 | 2094860 | ID=cds.MS.gene04769.t1;Parent=MS.gene04769.t1 |
chr4.2 | exon | 2090450 | 2090833 | 2090450 | ID=MS.gene04769.t1.exon3;Parent=MS.gene04769.t1 |
chr4.2 | CDS | 2090450 | 2090833 | 2090450 | ID=cds.MS.gene04769.t1;Parent=MS.gene04769.t1 |
chr4.2 | exon | 2090120 | 2090209 | 2090120 | ID=MS.gene04769.t1.exon4;Parent=MS.gene04769.t1 |
chr4.2 | CDS | 2090120 | 2090209 | 2090120 | ID=cds.MS.gene04769.t1;Parent=MS.gene04769.t1 |
chr4.2 | exon | 2089702 | 2089875 | 2089702 | ID=MS.gene04769.t1.exon5;Parent=MS.gene04769.t1 |
chr4.2 | CDS | 2089702 | 2089875 | 2089702 | ID=cds.MS.gene04769.t1;Parent=MS.gene04769.t1 |
chr4.2 | exon | 2089479 | 2089616 | 2089479 | ID=MS.gene04769.t1.exon6;Parent=MS.gene04769.t1 |
chr4.2 | CDS | 2089479 | 2089616 | 2089479 | ID=cds.MS.gene04769.t1;Parent=MS.gene04769.t1 |
chr4.2 | exon | 2089025 | 2089162 | 2089025 | ID=MS.gene04769.t1.exon7;Parent=MS.gene04769.t1 |
chr4.2 | CDS | 2089025 | 2089162 | 2089025 | ID=cds.MS.gene04769.t1;Parent=MS.gene04769.t1 |
chr4.2 | exon | 2088867 | 2088928 | 2088867 | ID=MS.gene04769.t1.exon8;Parent=MS.gene04769.t1 |
chr4.2 | CDS | 2088867 | 2088928 | 2088867 | ID=cds.MS.gene04769.t1;Parent=MS.gene04769.t1 |
chr4.2 | exon | 2088201 | 2088474 | 2088201 | ID=MS.gene04769.t1.exon9;Parent=MS.gene04769.t1 |
chr4.2 | CDS | 2088201 | 2088474 | 2088201 | ID=cds.MS.gene04769.t1;Parent=MS.gene04769.t1 |
Gene Sequence |
Protein sequence |