AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene009119

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009119.t1 MTR_8g064170 98.336 541 8 1 1 540 1 541 0.0 1100
MS.gene009119.t1 MTR_8g064170 92.421 541 8 2 1 540 1 509 0.0 1018
MS.gene009119.t1 MTR_3g078170 75.138 543 122 2 10 540 1 542 0.0 872
MS.gene009119.t1 MTR_4g107040 80.119 503 99 1 38 540 43 544 0.0 867
MS.gene009119.t1 MTR_3g078170 73.187 455 109 2 10 452 1 454 0.0 713
MS.gene009119.t1 MTR_3g078170 72.917 432 104 2 10 429 1 431 0.0 677
MS.gene009119.t1 MTR_3g078170 72.917 432 104 2 10 429 1 431 0.0 676
MS.gene009119.t1 MTR_6g086300 57.645 484 205 0 57 540 19 502 0.0 578
MS.gene009119.t1 MTR_6g086300 57.645 484 205 0 57 540 19 502 0.0 578
MS.gene009119.t1 MTR_8g083530 54.339 484 221 0 57 540 20 503 0.0 562
MS.gene009119.t1 MTR_6g086340 55.372 484 216 0 57 540 17 500 0.0 551
MS.gene009119.t1 MTR_8g083520 51.120 491 207 1 50 540 4 461 0.0 520
MS.gene009119.t1 MTR_8g083520 50.242 414 173 1 127 540 1 381 3.37e-147 428
MS.gene009119.t1 MTR_8g083530 53.333 330 154 0 57 386 20 349 4.29e-124 369
MS.gene009119.t1 MTR_3g078550 38.742 493 289 6 57 539 5 494 1.46e-113 346
MS.gene009119.t1 MTR_4g106510 40.202 495 283 6 55 539 3 494 7.36e-112 342
MS.gene009119.t1 MTR_3g078550 40.397 453 257 6 97 539 15 464 2.71e-108 332
MS.gene009119.t1 MTR_3g078490 37.952 498 292 6 54 539 32 524 1.58e-107 332
MS.gene009119.t1 MTR_2g067660 38.554 498 298 5 37 530 21 514 5.38e-104 322
MS.gene009119.t1 MTR_1690s0010 44.575 341 184 4 61 399 10 347 5.14e-83 262
MS.gene009119.t1 MTR_1g014320 31.557 488 306 10 65 539 21 493 2.65e-61 210
MS.gene009119.t1 MTR_3g078490 36.152 343 208 5 54 388 2 341 4.43e-61 206
MS.gene009119.t1 MTR_2g034160 30.078 512 319 11 50 531 26 528 3.42e-60 209
MS.gene009119.t1 MTR_4g131180 30.943 488 309 10 65 539 21 493 8.48e-59 203
MS.gene009119.t1 MTR_2g042330 30.655 473 309 11 66 526 23 488 1.80e-58 202
MS.gene009119.t1 MTR_4g131180 31.350 437 281 8 65 493 21 446 4.12e-55 193
MS.gene009119.t1 MTR_2g009750 31.276 486 312 11 63 536 18 493 2.77e-54 191
MS.gene009119.t1 MTR_2g009750 31.134 485 313 11 63 536 17 491 1.41e-53 189
MS.gene009119.t1 MTR_2g009750 31.134 485 313 11 63 536 18 492 1.83e-53 189
MS.gene009119.t1 MTR_4g093170 31.200 500 307 13 58 536 37 520 6.04e-53 188
MS.gene009119.t1 MTR_1399s0020 28.650 363 207 5 168 528 23 335 1.10e-39 147
MS.gene009119.t1 MTR_8g076480 28.825 451 285 14 98 531 8 439 3.27e-35 138
MS.gene009119.t1 MTR_1222s0010 32.687 361 214 11 129 476 33 377 5.34e-35 140
MS.gene009119.t1 MTR_1g029840 28.868 433 290 11 107 531 24 446 1.08e-33 134
MS.gene009119.t1 MTR_1g029840 28.079 406 278 9 133 531 48 446 1.29e-31 128
MS.gene009119.t1 MTR_8g094600 27.235 481 326 14 61 531 33 499 1.84e-30 125
MS.gene009119.t1 MTR_2g097950 29.103 457 287 16 93 530 14 452 7.99e-30 123
MS.gene009119.t1 MTR_3g088150 27.169 438 299 13 103 531 22 448 1.68e-29 122
MS.gene009119.t1 MTR_1314s0010 29.885 348 218 8 197 530 1 336 1.80e-28 116
MS.gene009119.t1 MTR_2g097950 26.940 464 271 16 85 530 4 417 1.45e-24 107
MS.gene009119.t1 MTR_4g065040 28.469 418 263 15 133 531 38 438 1.25e-20 95.5
MS.gene009119.t1 MTR_0002s0820 46.667 120 47 2 240 342 29 148 1.60e-20 89.0
MS.gene009119.t1 MTR_4g107940 25.304 411 270 15 63 450 54 450 6.04e-12 68.6
MS.gene009119.t1 MTR_4g107940 25.304 411 270 15 63 450 54 450 6.45e-12 68.2
MS.gene009119.t1 MTR_8g064020 89.286 28 3 0 513 540 53 80 3.54e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009119.t1 AT3G48000 76.866 536 121 2 6 540 5 538 0.0 877
MS.gene009119.t1 AT1G23800 81.275 502 94 0 39 540 33 534 0.0 873
MS.gene009119.t1 AT1G23800 82.081 346 62 0 39 384 33 378 0.0 615
MS.gene009119.t1 AT3G24503 55.350 486 216 1 56 540 16 501 0.0 558
MS.gene009119.t1 AT3G48170 41.331 496 278 6 54 539 2 494 8.85e-128 383
MS.gene009119.t1 AT1G74920 40.695 489 277 6 61 539 9 494 1.91e-121 367
MS.gene009119.t1 AT1G74920 40.900 489 271 7 61 539 9 489 7.01e-120 362
MS.gene009119.t1 AT1G79440 39.746 473 280 4 59 530 52 520 1.36e-102 319
MS.gene009119.t1 AT1G54100 31.049 467 300 12 72 526 31 487 2.16e-58 202
MS.gene009119.t1 AT1G54100 31.049 467 300 12 72 526 31 487 2.16e-58 202
MS.gene009119.t1 AT2G24270 31.707 492 300 11 65 539 21 493 2.27e-58 202
MS.gene009119.t1 AT2G24270 31.707 492 300 11 65 539 21 493 2.33e-58 202
MS.gene009119.t1 AT2G24270 31.707 492 300 11 65 539 21 493 2.33e-58 202
MS.gene009119.t1 AT3G66658 28.487 509 331 9 50 531 26 528 3.71e-58 203
MS.gene009119.t1 AT2G24270 31.707 492 300 11 65 539 61 533 5.13e-58 202
MS.gene009119.t1 AT3G66658 28.487 509 331 9 50 531 26 528 9.41e-58 202
MS.gene009119.t1 AT2G14170 31.417 487 310 12 63 536 8 483 3.12e-57 199
MS.gene009119.t1 AT2G14170 33.030 439 277 10 63 493 117 546 1.16e-56 200
MS.gene009119.t1 AT2G14170 31.417 487 310 12 63 536 117 592 2.06e-56 199
MS.gene009119.t1 AT1G44170 28.829 444 298 12 96 531 9 442 2.23e-38 147
MS.gene009119.t1 AT1G44170 28.829 444 298 12 96 531 9 442 2.23e-38 147
MS.gene009119.t1 AT1G44170 29.971 347 233 8 188 531 40 379 9.55e-34 133
MS.gene009119.t1 AT4G36250 27.912 455 297 16 93 531 2 441 3.07e-32 130
MS.gene009119.t1 AT4G34240 28.736 348 236 8 188 531 24 363 2.88e-28 117
MS.gene009119.t1 AT4G34240 28.736 348 236 8 188 531 166 505 2.04e-27 116
MS.gene009119.t1 AT4G34240 28.736 348 236 8 188 531 151 490 2.29e-27 116
MS.gene009119.t1 AT4G34240 38.065 155 91 4 188 341 166 316 4.60e-15 77.8
MS.gene009119.t1 AT5G62530 25.587 426 257 18 60 450 53 453 2.91e-11 66.6

Find 121 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGGTGGGAATGGTTATC+TGG 0.219323 8.1:-39389863 MS.gene009119:intron
CCACCAAGCTCCAAAGTTAC+TGG 0.253675 8.1:+39388167 None:intergenic
GCATCTTCGCAAACAATAAA+TGG 0.267947 8.1:+39388137 None:intergenic
AGTGGACAGGGCAGAGAAAA+AGG 0.274646 8.1:-39386844 MS.gene009119:CDS
TTTACTGGTTCAACCGATAC+TGG 0.279461 8.1:-39388230 MS.gene009119:CDS
CACGAACCAATTGGCGTTGC+TGG 0.282957 8.1:-39389012 MS.gene009119:CDS
GTCTCACTTGAATTTCAATA+TGG 0.295168 8.1:+39387318 None:intergenic
TCTTCTCATGTTTGCTTGGA+AGG 0.308492 8.1:-39388965 MS.gene009119:CDS
CTCATGTTTGCTTGGAAGGT+TGG 0.312209 8.1:-39388961 MS.gene009119:CDS
GCACTTGAGACTTGGGATAA+TGG 0.315242 8.1:-39389256 MS.gene009119:CDS
TTTGATGCTGCAATTCCTTT+TGG 0.326962 8.1:-39386880 MS.gene009119:CDS
ATCTGAGCAGATTGTTCATA+TGG 0.331515 8.1:+39389229 None:intergenic
ATTGCAAAAGAAGAGATATT+TGG 0.335473 8.1:-39387352 MS.gene009119:CDS
CACTTGAGACTTGGGATAAT+GGG 0.341726 8.1:-39389255 MS.gene009119:CDS
CATTGAAAGTGGGAACAGTT+TGG 0.350522 8.1:-39386921 MS.gene009119:CDS
TACTGTCTTCTCAAATGTTC+AGG 0.364449 8.1:-39387491 MS.gene009119:intron
CTACAAATTTGCCATCGATT+AGG 0.366038 8.1:+39389755 None:intergenic
ACTTGCACCGATGGTTTAAT+CGG 0.379104 8.1:+39389793 None:intergenic
ATTAGATCTGGCGTTGATAA+TGG 0.379386 8.1:-39387571 MS.gene009119:CDS
ATTGAAAGTGGGAACAGTTT+GGG 0.385160 8.1:-39386920 MS.gene009119:CDS
CAATCTTAAGCCAGTAACTT+TGG 0.390920 8.1:-39388177 MS.gene009119:CDS
AGAGCAAACAATTCAAAGTA+TGG 0.393602 8.1:-39387000 MS.gene009119:CDS
TCCCTCTTCTCATGTTTGCT+TGG 0.401686 8.1:-39388969 MS.gene009119:CDS
CAGGGACAATGTTGCTGTGC+CGG 0.407196 8.1:-39387979 MS.gene009119:CDS
TGGAAAAGTTGTCCTTCAAT+TGG 0.409434 8.1:-39388210 MS.gene009119:CDS
AATTTCAATATGGTTTGTAC+TGG 0.414009 8.1:+39387328 None:intergenic
TGTTCTGTTCCTGACTTGAA+TGG 0.414781 8.1:+39387871 None:intergenic
TGCAATGTCTGCACATGATA+TGG 0.425470 8.1:+39389033 None:intergenic
TACCAGCATAGTAACGAATT+AGG 0.432343 8.1:+39389185 None:intergenic
AGCAATGATCATACATAAGC+TGG 0.439518 8.1:+39389457 None:intergenic
ATCTGACCAGCAACGCCAAT+TGG 0.441277 8.1:+39389006 None:intergenic
CATACATAAGCTGGAAACTT+AGG 0.447847 8.1:+39389466 None:intergenic
CAGACATTGCACGAACCAAT+TGG 0.452449 8.1:-39389021 MS.gene009119:CDS
AATGGCGCTACACTTGAAAC+TGG 0.456541 8.1:-39387553 MS.gene009119:CDS
CGCCTAATTCGTTACTATGC+TGG 0.456816 8.1:-39389187 MS.gene009119:intron
CGAATTAGGCGAACCAGCAT+TGG 0.458512 8.1:+39389199 None:intergenic
AAATTGCAGCACTTGAGACT+TGG 0.458601 8.1:-39389264 MS.gene009119:CDS
AGCAGACAATGGCGTCTGTT+CGG 0.461854 8.1:+39388897 None:intergenic
TTGTAGGCCGGACTTCCTGC+TGG 0.465059 8.1:-39388724 MS.gene009119:intron
AAGCCAGTAACTTTGGAGCT+TGG 0.466523 8.1:-39388170 MS.gene009119:CDS
GCAATCACTTCCCCTGTCCT+TGG 0.470122 8.1:+39389568 None:intergenic
GCACGCAAAGCATTTGATCA+AGG 0.473740 8.1:-39389496 MS.gene009119:CDS
GGTTGGGCAGATAAGATTCA+TGG 0.473931 8.1:-39389078 MS.gene009119:CDS
TGCTTTGCGTGCAGCTGCAA+CGG 0.475234 8.1:+39389507 None:intergenic
TTGAATATAATATCTGGCTT+TGG 0.484962 8.1:-39388697 MS.gene009119:CDS
CTTTGCCTTGTTCTTTAACC+AGG 0.485383 8.1:-39388084 MS.gene009119:intron
CCAGTAACTTTGGAGCTTGG+TGG 0.486152 8.1:-39388167 MS.gene009119:CDS
AATGTACTTTCAGGTGGGAA+TGG 0.487239 8.1:-39389871 MS.gene009119:intron
AGGGACAATGTTGCTGTGCC+GGG 0.490364 8.1:-39387978 MS.gene009119:CDS
TCAAAGTATGGTCTTGCAGC+AGG 0.491649 8.1:-39386988 MS.gene009119:CDS
TAGTCACATGGATGTTGATA+AGG 0.496076 8.1:-39388650 MS.gene009119:intron
TCAGATTGAAATTCCAATGC+TGG 0.496455 8.1:-39389212 MS.gene009119:CDS
TCTGGCTTTGGTCCAACTGC+AGG 0.500521 8.1:-39388685 MS.gene009119:CDS
CCAACATTGGATCCAAGGAC+AGG 0.507885 8.1:-39389580 MS.gene009119:CDS
CCTGTCCTTGGATCCAATGT+TGG 0.511997 8.1:+39389580 None:intergenic
GGTGTGTTGAATATAATATC+TGG 0.513993 8.1:-39388703 MS.gene009119:CDS
CTCATCTTATATCCACCAAA+AGG 0.515568 8.1:+39386865 None:intergenic
ATATTGAAGTATATTAGATC+TGG 0.517435 8.1:-39387583 MS.gene009119:CDS
CAGTAACTTTGGAGCTTGGT+GGG 0.518287 8.1:-39388166 MS.gene009119:CDS
CAACACACCAGCAGGAAGTC+CGG 0.521409 8.1:+39388717 None:intergenic
CTTCTTCAATCAAAATCTCA+AGG 0.522051 8.1:-39391026 MS.gene009119:CDS
GGGCTCACAGTTCCAGCTGA+TGG 0.526400 8.1:-39389057 MS.gene009119:CDS
ACGTGTGCATGAGGAGTTTG+TGG 0.530875 8.1:-39387935 MS.gene009119:CDS
GTAGGAGATCCATTCAAGTC+AGG 0.532267 8.1:-39387880 MS.gene009119:CDS
TCAGGTGGGAATGGTTATCT+GGG 0.532469 8.1:-39389862 MS.gene009119:intron
ATTATATTCAACACACCAGC+AGG 0.533022 8.1:+39388709 None:intergenic
AATTGCAGCACTTGAGACTT+GGG 0.535187 8.1:-39389263 MS.gene009119:CDS
TGGATATAAGATGAGTGGAC+AGG 0.537139 8.1:-39386857 MS.gene009119:CDS
AGGAACAGAACAAGGTCCTC+AGG 0.538549 8.1:-39387860 MS.gene009119:intron
ACAGATGCTCAAAGCCATGC+TGG 0.538877 8.1:+39386763 None:intergenic
ATGAGAAGAGGGAAGTTCCA+TGG 0.539559 8.1:+39388979 None:intergenic
ACATGATATGGTCCATCAGC+TGG 0.548696 8.1:+39389045 None:intergenic
GTGTGGTCGACTTGCACCGA+TGG 0.550868 8.1:+39389784 None:intergenic
GCAAGAGCAGCACCTGCAGT+TGG 0.553046 8.1:+39388673 None:intergenic
TGCTGCTCTTGCTAGTCACA+TGG 0.554143 8.1:-39388662 MS.gene009119:CDS
CATTTCCAACATTGGATCCA+AGG 0.556983 8.1:-39389585 MS.gene009119:CDS
CACGCAAAGCATTTGATCAA+GGG 0.557713 8.1:-39389495 MS.gene009119:CDS
TACAGCACGTTTCAAAGCAC+GGG 0.560601 8.1:+39387900 None:intergenic
CAACATTGGATCCAAGGACA+GGG 0.563764 8.1:-39389579 MS.gene009119:CDS
AGGTAGAACATTTCCAACAT+TGG 0.570539 8.1:-39389593 MS.gene009119:CDS
AAGCATTTGATCAAGGGCCG+TGG 0.572236 8.1:-39389489 MS.gene009119:CDS
GTGTTGCCACACGCTAATGC+TGG 0.572272 8.1:+39388937 None:intergenic
AAATTTGTAGATGCTGCTGC+TGG 0.577592 8.1:-39389742 MS.gene009119:intron
TTGATTGGTTCAAGGGACCT+TGG 0.579537 8.1:-39387036 MS.gene009119:intron
CTACAGCACGTTTCAAAGCA+CGG 0.582648 8.1:+39387899 None:intergenic
TCCAAGCAAACATGAGAAGA+GGG 0.585819 8.1:+39388968 None:intergenic
AGGAGAAAGACTTGGTAGCA+AGG 0.587482 8.1:-39387530 MS.gene009119:CDS
ATGTACAAATGTTCGAGACC+CGG 0.588405 8.1:+39387960 None:intergenic
AGTGATTGCTCATGTTGCTG+AGG 0.588599 8.1:-39389554 MS.gene009119:CDS
TTTGGTGGATATAAGATGAG+TGG 0.589571 8.1:-39386862 MS.gene009119:CDS
CTCTTTGAATCACCTCACCA+AGG 0.589796 8.1:+39387019 None:intergenic
TTCAAGTCAGGAACAGAACA+AGG 0.593415 8.1:-39387868 MS.gene009119:CDS
GGATATAAGATGAGTGGACA+GGG 0.593641 8.1:-39386856 MS.gene009119:CDS
CACCTTTGAAGAATCCAGCA+TGG 0.596410 8.1:-39386777 MS.gene009119:CDS
GTTGGGCAGATAAGATTCAT+GGG 0.597943 8.1:-39389077 MS.gene009119:CDS
TTCCAAGCAAACATGAGAAG+AGG 0.599102 8.1:+39388967 None:intergenic
GGAGAAAGACTTGGTAGCAA+GGG 0.599344 8.1:-39387529 MS.gene009119:CDS
CGTGCTTTGAAACGTGCTGT+AGG 0.601175 8.1:-39387898 MS.gene009119:CDS
TTTGACTAGAGCATTGAAAG+TGG 0.602275 8.1:-39386932 MS.gene009119:CDS
TTGACTAGAGCATTGAAAGT+GGG 0.603811 8.1:-39386931 MS.gene009119:CDS
GGTGGGAATGGTTATCTGGG+TGG 0.605677 8.1:-39389859 MS.gene009119:CDS
ACCACGAGAAAACAAGGAGG+TGG 0.610351 8.1:+39390969 None:intergenic
AGCCATGCTGGATTCTTCAA+AGG 0.612311 8.1:+39386775 None:intergenic
TAATTTACCACGAGAAAACA+AGG 0.622670 8.1:+39390963 None:intergenic
TTGCTGGTCAGATCATTCCA+TGG 0.623473 8.1:-39388996 MS.gene009119:CDS
GAAACTGGAGGAGAAAGACT+TGG 0.623804 8.1:-39387538 MS.gene009119:CDS
CACACTCAGCTCCTAATCGA+TGG 0.626153 8.1:-39389766 MS.gene009119:CDS
GCTACATACAAAGCAGACAA+TGG 0.629627 8.1:+39388886 None:intergenic
TGAACATTTGAGAAGACAGT+AGG 0.631599 8.1:+39387493 None:intergenic
ACATACCTGGTTAAAGAACA+AGG 0.635925 8.1:+39388079 None:intergenic
GTGATTGCTCATGTTGCTGA+GGG 0.636914 8.1:-39389553 MS.gene009119:CDS
GGCGCTACACTTGAAACTGG+AGG 0.646681 8.1:-39387550 MS.gene009119:CDS
TAAGCTGGAAACTTAGGCCA+CGG 0.652576 8.1:+39389472 None:intergenic
TGGTTCAAGGGACCTTGGTG+AGG 0.655055 8.1:-39387031 MS.gene009119:intron
GGAGTTTGTGGAGAAAGCAA+AGG 0.675768 8.1:-39387923 MS.gene009119:CDS
TGTAGCAAAACTATTTCACG+AGG 0.677900 8.1:-39388869 MS.gene009119:intron
TGTACATGAACGTGTGCATG+AGG 0.681956 8.1:-39387944 MS.gene009119:CDS
AACATTGGATCCAAGGACAG+GGG 0.683175 8.1:-39389578 MS.gene009119:CDS
GTTGGACCAGCATTAGCGTG+TGG 0.686548 8.1:-39388943 MS.gene009119:CDS
CATCGATTAGGAGCTGAGTG+TGG 0.695634 8.1:+39389767 None:intergenic
TTTACCACGAGAAAACAAGG+AGG 0.806523 8.1:+39390966 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGATGTATAATAAATA+GGG + chr8.1:39387170-39387189 None:intergenic 10.0%
!!! AAGATAAAAGATATATTTTA+TGG + chr8.1:39389035-39389054 None:intergenic 10.0%
!! AAAAGATGTATAATAAATAG+GGG + chr8.1:39387169-39387188 None:intergenic 15.0%
!! AAAGAAATAATTAATGTAGT+TGG + chr8.1:39387137-39387156 None:intergenic 15.0%
!! AATATGTTTGTAATTACTAT+TGG + chr8.1:39387264-39387283 None:intergenic 15.0%
!! GAAAAAGATGTATAATAAAT+AGG + chr8.1:39387171-39387190 None:intergenic 15.0%
!! TATATAAATTAAAGCAAGAT+TGG + chr8.1:39388971-39388990 None:intergenic 15.0%
!!! CTTTTTATACAATTTTGATT+AGG - chr8.1:39388109-39388128 MS.gene009119:CDS 15.0%
!!! TTTTAAGAAAATGATTTTCT+GGG - chr8.1:39386971-39386990 MS.gene009119:CDS 15.0%
!!! TTTTTAAGAAAATGATTTTC+TGG - chr8.1:39386970-39386989 MS.gene009119:CDS 15.0%
!! AAAAAGAGTCATAAACATTA+AGG + chr8.1:39390125-39390144 None:intergenic 20.0%
!! ATATTGAAGTATATTAGATC+TGG - chr8.1:39390218-39390237 MS.gene009119:intron 20.0%
!! ATGATAGATTGAATATTGAA+AGG - chr8.1:39387901-39387920 MS.gene009119:CDS 20.0%
!! CAGATACAATTAAAAACATT+AGG + chr8.1:39390403-39390422 None:intergenic 20.0%
!! GAAATGCATGTTTAAATTAA+CGG - chr8.1:39387622-39387641 MS.gene009119:intron 20.0%
!! GACAAAAAATATTCTCAAAA+GGG + chr8.1:39387087-39387106 None:intergenic 20.0%
!! TAATTTAAACATGCATTTCA+AGG + chr8.1:39387621-39387640 None:intergenic 20.0%
!! TACAAGAAAGATTACAAATT+AGG + chr8.1:39389062-39389081 None:intergenic 20.0%
!! TGATAGATTGAATATTGAAA+GGG - chr8.1:39387902-39387921 MS.gene009119:CDS 20.0%
!!! ATTTCAATTGGTGATTAAAA+GGG - chr8.1:39387816-39387835 MS.gene009119:intron 20.0%
!!! TAATTTGTAATCTTTCTTGT+AGG - chr8.1:39389061-39389080 MS.gene009119:CDS 20.0%
!!! TACAAAAACATTGTTTTTAG+TGG - chr8.1:39388997-39389016 MS.gene009119:CDS 20.0%
!!! TCAGTTTATGATTTTCATTA+GGG - chr8.1:39387844-39387863 MS.gene009119:intron 20.0%
!!! TCTCTAGAAAATTTTATAAG+AGG - chr8.1:39390674-39390693 MS.gene009119:intron 20.0%
!!! TTCAGTTTATGATTTTCATT+AGG - chr8.1:39387843-39387862 MS.gene009119:intron 20.0%
!!! TTTAAGAAAATGATTTTCTG+GGG - chr8.1:39386972-39386991 MS.gene009119:CDS 20.0%
!!! TTTTGAATTTGATTGATGAT+GGG - chr8.1:39386998-39387017 MS.gene009119:CDS 20.0%
!!! TTTTTCTTTCATTAATTGCA+TGG - chr8.1:39387409-39387428 MS.gene009119:intron 20.0%
! AAGAAAAGAGGATTAACTAA+AGG - chr8.1:39388133-39388152 MS.gene009119:CDS 25.0%
! ATAATTCGGATATCATTGAT+TGG - chr8.1:39389783-39389802 MS.gene009119:CDS 25.0%
! ATATAGACTACATTTGATGA+AGG + chr8.1:39390578-39390597 None:intergenic 25.0%
! ATCAATGATATCCGAATTAT+AGG + chr8.1:39389783-39389802 None:intergenic 25.0%
! ATTGCAAAAGAAGAGATATT+TGG - chr8.1:39390449-39390468 MS.gene009119:intron 25.0%
! ATTGCATTGCACATAAAAAT+AGG + chr8.1:39390734-39390753 None:intergenic 25.0%
! CATATTACTATAGCCAAAAA+AGG + chr8.1:39387540-39387559 None:intergenic 25.0%
! GATGTTATCTTGATTTCAAT+TGG - chr8.1:39387804-39387823 MS.gene009119:intron 25.0%
! GATTAACTAAAGGAAAAGAA+GGG - chr8.1:39388143-39388162 MS.gene009119:CDS 25.0%
! GGACAAAAAATATTCTCAAA+AGG + chr8.1:39387088-39387107 None:intergenic 25.0%
! GGCTATAGTAATATGAAAAT+TGG - chr8.1:39387545-39387564 MS.gene009119:CDS 25.0%
! GTTTGTCAAGTCATTATATT+TGG - chr8.1:39388398-39388417 MS.gene009119:intron 25.0%
! TATAGACTACATTTGATGAA+GGG + chr8.1:39390577-39390596 None:intergenic 25.0%
! TATTCATTGTAATTTACCTG+AGG + chr8.1:39389960-39389979 None:intergenic 25.0%
! TTATATTCTCATCTTTGCAA+AGG - chr8.1:39390360-39390379 MS.gene009119:intron 25.0%
! TTGCATTGCACATAAAAATA+GGG + chr8.1:39390733-39390752 None:intergenic 25.0%
! TTTGAATCAATCTGATTGTT+TGG + chr8.1:39390185-39390204 None:intergenic 25.0%
! TTTGCAAAAATCGTCAAATT+GGG + chr8.1:39390624-39390643 None:intergenic 25.0%
! TTTGTACATGTTTAGATTGA+TGG - chr8.1:39387568-39387587 MS.gene009119:CDS 25.0%
!! AAAAAAATGTACTTTCAGGT+GGG - chr8.1:39387925-39387944 MS.gene009119:CDS 25.0%
!! AATTTCAATATGGTTTGTAC+TGG + chr8.1:39390476-39390495 None:intergenic 25.0%
!! ATGCTTTCAATCTAAAATGT+CGG + chr8.1:39389258-39389277 None:intergenic 25.0%
!! ATTTTTGTTAAGTCCATCTT+TGG + chr8.1:39387701-39387720 None:intergenic 25.0%
!! CAGTTTATGATTTTCATTAG+GGG - chr8.1:39387845-39387864 MS.gene009119:intron 25.0%
!! GATTTCAATTGGTGATTAAA+AGG - chr8.1:39387815-39387834 MS.gene009119:intron 25.0%
!! TCAAAAGGGTCTTATAATTA+GGG + chr8.1:39387073-39387092 None:intergenic 25.0%
!! TTGAATATAATATCTGGCTT+TGG - chr8.1:39389104-39389123 MS.gene009119:intron 25.0%
!! TTTCAATTGGTGATTAAAAG+GGG - chr8.1:39387817-39387836 MS.gene009119:intron 25.0%
!! TTTTGCAAAAATCGTCAAAT+TGG + chr8.1:39390625-39390644 None:intergenic 25.0%
!!! ATTCCCGTTATTTTTTCAAA+AGG - chr8.1:39387307-39387326 MS.gene009119:intron 25.0%
!!! GTTTTGAATTTGATTGATGA+TGG - chr8.1:39386997-39387016 MS.gene009119:CDS 25.0%
!!! TATAAGAGGTGTATTTTACA+AGG - chr8.1:39390688-39390707 MS.gene009119:intron 25.0%
!!! TTCCCGTTATTTTTTCAAAA+GGG - chr8.1:39387308-39387327 MS.gene009119:intron 25.0%
!!! TTTAATCGGTTTTTCATCAA+TGG + chr8.1:39387997-39388016 None:intergenic 25.0%
!!! TTTCTGTTTCTGTGTTTTAT+AGG - chr8.1:39388460-39388479 MS.gene009119:intron 25.0%
!!! TTTTGATTAGGAAAGAAAAG+AGG - chr8.1:39388121-39388140 MS.gene009119:CDS 25.0%
AATGTAGTTGGAAATAGCAA+AGG + chr8.1:39387125-39387144 None:intergenic 30.0%
AGAGCAAACAATTCAAAGTA+TGG - chr8.1:39390801-39390820 MS.gene009119:intron 30.0%
AGGGAAAAAAATGTACTTTC+AGG - chr8.1:39387921-39387940 MS.gene009119:CDS 30.0%
ATGTAGTTGGAAATAGCAAA+GGG + chr8.1:39387124-39387143 None:intergenic 30.0%
CAATTGTCTCTCCTATAATT+CGG - chr8.1:39389769-39389788 MS.gene009119:CDS 30.0%
CAGAAACAGAAAAACAAAAG+TGG + chr8.1:39388452-39388471 None:intergenic 30.0%
CTTCTTCAATCAAAATCTCA+AGG - chr8.1:39386775-39386794 MS.gene009119:CDS 30.0%
GAAAAAAATGTACTTTCAGG+TGG - chr8.1:39387924-39387943 MS.gene009119:CDS 30.0%
GGATTAACTAAAGGAAAAGA+AGG - chr8.1:39388142-39388161 MS.gene009119:CDS 30.0%
GGTGTGTTGAATATAATATC+TGG - chr8.1:39389098-39389117 MS.gene009119:intron 30.0%
GTCTCACTTGAATTTCAATA+TGG + chr8.1:39390486-39390505 None:intergenic 30.0%
TAAAAACTACTTGCAAGTGA+AGG - chr8.1:39390992-39391011 MS.gene009119:CDS 30.0%
TAATTTACCACGAGAAAACA+AGG + chr8.1:39386841-39386860 None:intergenic 30.0%
TCAAAAGGGTCCTATAATTA+GGG - chr8.1:39387322-39387341 MS.gene009119:intron 30.0%
TCTTTCATTAATTGCATGGT+TGG - chr8.1:39387413-39387432 MS.gene009119:intron 30.0%
TGAAAAACCGATTAAACCAT+CGG - chr8.1:39388001-39388020 MS.gene009119:intron 30.0%
TGTCAAACACTAACACATAT+CGG + chr8.1:39389290-39389309 None:intergenic 30.0%
TTCAAAAGGGTCCTATAATT+AGG - chr8.1:39387321-39387340 MS.gene009119:intron 30.0%
TTTAAACATGCATTTCAAGG+TGG + chr8.1:39387618-39387637 None:intergenic 30.0%
! AATAACGGGAATTAAGATAG+TGG + chr8.1:39387299-39387318 None:intergenic 30.0%
! ATGATTTTCATTAGGGGTTT+AGG - chr8.1:39387851-39387870 MS.gene009119:intron 30.0%
! CAAAAGATTTTCCAAGATTC+AGG + chr8.1:39389542-39389561 None:intergenic 30.0%
! CTCAAAAGGGTCTTATAATT+AGG + chr8.1:39387074-39387093 None:intergenic 30.0%
! GTTTAGATTGATGGTCTATT+TGG - chr8.1:39387577-39387596 MS.gene009119:CDS 30.0%
! GTTTCTGTGTTTTATAGGAA+AGG - chr8.1:39388465-39388484 MS.gene009119:intron 30.0%
! TGTATTTTCATATTTACCCC+AGG - chr8.1:39388702-39388721 MS.gene009119:CDS 30.0%
! TTTTGTGGTATCTTACCTTT+TGG - chr8.1:39388170-39388189 MS.gene009119:CDS 30.0%
!! GACCCTTTTGAAAAAATAAC+GGG + chr8.1:39387313-39387332 None:intergenic 30.0%
!! GGACCCTTTTGAAAAAATAA+CGG + chr8.1:39387314-39387333 None:intergenic 30.0%
!! TTTGTTTTCCTAATTCGCTA+CGG - chr8.1:39390014-39390033 MS.gene009119:intron 30.0%
!! TTTTAGATTGAAAGCATGTC+TGG - chr8.1:39389261-39389280 MS.gene009119:CDS 30.0%
!!! ACGTTTTGTTTGTACATTAG+TGG - chr8.1:39389494-39389513 MS.gene009119:CDS 30.0%
!!! TAGGGGTTTAGGTTTTTTAA+AGG - chr8.1:39387862-39387881 MS.gene009119:CDS 30.0%
AAACCAACACTCTCTCTTAA+AGG - chr8.1:39387224-39387243 MS.gene009119:intron 35.0%
ACATACCTGGTTAAAGAACA+AGG + chr8.1:39389725-39389744 None:intergenic 35.0%
AGCAATGATCATACATAAGC+TGG + chr8.1:39388347-39388366 None:intergenic 35.0%
AGGTAGAACATTTCCAACAT+TGG - chr8.1:39388208-39388227 MS.gene009119:CDS 35.0%
ATCTGAGCAGATTGTTCATA+TGG + chr8.1:39388575-39388594 None:intergenic 35.0%
ATCTGTGTGACATGAAAGAA+AGG - chr8.1:39387382-39387401 MS.gene009119:intron 35.0%
ATTATATTCAACACACCAGC+AGG + chr8.1:39389095-39389114 None:intergenic 35.0%
ATTGAAAGTGGGAACAGTTT+GGG - chr8.1:39390881-39390900 MS.gene009119:intron 35.0%
ATTGACACTAGATCCAAAGA+TGG - chr8.1:39387685-39387704 MS.gene009119:intron 35.0%
CAATCTTAAGCCAGTAACTT+TGG - chr8.1:39389624-39389643 MS.gene009119:intron 35.0%
CATACATAAGCTGGAAACTT+AGG + chr8.1:39388338-39388357 None:intergenic 35.0%
CTAAAAACTCATGTCTGTGT+CGG - chr8.1:39387773-39387792 MS.gene009119:intron 35.0%
CTATGTATCAAAGTTGTGTC+CGG - chr8.1:39389375-39389394 MS.gene009119:intron 35.0%
CTCATCTTATATCCACCAAA+AGG + chr8.1:39390939-39390958 None:intergenic 35.0%
CTCTACAAATCAAGACTCAT+TGG + chr8.1:39390508-39390527 None:intergenic 35.0%
GCATCTTCGCAAACAATAAA+TGG + chr8.1:39389667-39389686 None:intergenic 35.0%
TACCAGCATAGTAACGAATT+AGG + chr8.1:39388619-39388638 None:intergenic 35.0%
TACTGTCTTCTCAAATGTTC+AGG - chr8.1:39390310-39390329 MS.gene009119:intron 35.0%
TAGTCACATGGATGTTGATA+AGG - chr8.1:39389151-39389170 MS.gene009119:intron 35.0%
TCAGATTGAAATTCCAATGC+TGG - chr8.1:39388589-39388608 MS.gene009119:intron 35.0%
TGAACATTTGAGAAGACAGT+AGG + chr8.1:39390311-39390330 None:intergenic 35.0%
TGGAAAAGTTGTCCTTCAAT+TGG - chr8.1:39389591-39389610 MS.gene009119:CDS 35.0%
TGTAGCAAAACTATTTCACG+AGG - chr8.1:39388932-39388951 MS.gene009119:CDS 35.0%
TGTAGTTGGAAATAGCAAAG+GGG + chr8.1:39387123-39387142 None:intergenic 35.0%
TGTATCTGTAACAATCATCC+AGG - chr8.1:39390415-39390434 MS.gene009119:intron 35.0%
TTGTAATCTTTCTTGTAGGC+CGG - chr8.1:39389065-39389084 MS.gene009119:CDS 35.0%
TTGTGATGTTCAGATACTAG+AGG - chr8.1:39390040-39390059 MS.gene009119:intron 35.0%
TTTCATATTTACCCCAGGTT+GGG - chr8.1:39388707-39388726 MS.gene009119:CDS 35.0%
! AAGGACAACTTTTCCAGTAT+CGG + chr8.1:39389587-39389606 None:intergenic 35.0%
! AAGGGTCTTATAATTAGGGA+CGG + chr8.1:39387069-39387088 None:intergenic 35.0%
! AGCAAAGGGGTCTTATAAAA+AGG + chr8.1:39387110-39387129 None:intergenic 35.0%
! CTACAAATTTGCCATCGATT+AGG + chr8.1:39388049-39388068 None:intergenic 35.0%
! GCAAAGGGGTCTTATAAAAA+GGG + chr8.1:39387109-39387128 None:intergenic 35.0%
! TATCCTTTAAGAGAGAGTGT+TGG + chr8.1:39387230-39387249 None:intergenic 35.0%
! TTGATGAAGGGTGCATTAAA+GGG + chr8.1:39390565-39390584 None:intergenic 35.0%
! TTTGATGAAGGGTGCATTAA+AGG + chr8.1:39390566-39390585 None:intergenic 35.0%
! TTTGATGCTGCAATTCCTTT+TGG - chr8.1:39390921-39390940 MS.gene009119:intron 35.0%
! TTTGGTGGATATAAGATGAG+TGG - chr8.1:39390939-39390958 MS.gene009119:intron 35.0%
! TTTTCATATTTACCCCAGGT+TGG - chr8.1:39388706-39388725 MS.gene009119:CDS 35.0%
!! ATTAGATCTGGCGTTGATAA+TGG - chr8.1:39390230-39390249 MS.gene009119:intron 35.0%
!! TTGACTAGAGCATTGAAAGT+GGG - chr8.1:39390870-39390889 MS.gene009119:intron 35.0%
!! TTTGACTAGAGCATTGAAAG+TGG - chr8.1:39390869-39390888 MS.gene009119:intron 35.0%
!!! GAAAAGAAGGGTTGTTTTTG+TGG - chr8.1:39388155-39388174 MS.gene009119:CDS 35.0%
!!! TAAGAGTGCTACTCCTTTTT+TGG - chr8.1:39387524-39387543 MS.gene009119:CDS 35.0%
AAATTGCAGCACTTGAGACT+TGG - chr8.1:39388537-39388556 MS.gene009119:intron 40.0%
AAATTTGTAGATGCTGCTGC+TGG - chr8.1:39388059-39388078 MS.gene009119:intron 40.0%
AAGGGTCCTATAATTAGGGA+CGG - chr8.1:39387326-39387345 MS.gene009119:CDS 40.0%
AATTGCAGCACTTGAGACTT+GGG - chr8.1:39388538-39388557 MS.gene009119:intron 40.0%
ATGTACAAATGTTCGAGACC+CGG + chr8.1:39389844-39389863 None:intergenic 40.0%
CACTTGAGACTTGGGATAAT+GGG - chr8.1:39388546-39388565 MS.gene009119:intron 40.0%
CATTGAAAGTGGGAACAGTT+TGG - chr8.1:39390880-39390899 MS.gene009119:intron 40.0%
CATTTCCAACATTGGATCCA+AGG - chr8.1:39388216-39388235 MS.gene009119:CDS 40.0%
CGGTGAGATAAGTGAAATCA+CGG - chr8.1:39387642-39387661 MS.gene009119:intron 40.0%
GAACTCTGATTGTACATACC+TGG + chr8.1:39389738-39389757 None:intergenic 40.0%
GATCACAGACAAACTCCAAA+AGG + chr8.1:39388188-39388207 None:intergenic 40.0%
GCTACATACAAAGCAGACAA+TGG + chr8.1:39388918-39388937 None:intergenic 40.0%
GGATATAAGATGAGTGGACA+GGG - chr8.1:39390945-39390964 MS.gene009119:intron 40.0%
GTTGGGCAGATAAGATTCAT+GGG - chr8.1:39388724-39388743 MS.gene009119:intron 40.0%
TCCAAGCAAACATGAGAAGA+GGG + chr8.1:39388836-39388855 None:intergenic 40.0%
TCTGTAACAATCATCCAGGA+TGG - chr8.1:39390419-39390438 MS.gene009119:intron 40.0%
TCTTCTCATGTTTGCTTGGA+AGG - chr8.1:39388836-39388855 MS.gene009119:intron 40.0%
TGAAACACTAACACAGACAC+CGG + chr8.1:39389397-39389416 None:intergenic 40.0%
TGAGATAAGTGAAATCACGG+TGG - chr8.1:39387645-39387664 MS.gene009119:intron 40.0%
TGCAATGTCTGCACATGATA+TGG + chr8.1:39388771-39388790 None:intergenic 40.0%
TGGATATAAGATGAGTGGAC+AGG - chr8.1:39390944-39390963 MS.gene009119:intron 40.0%
TGGTCTATTTGGCAGAATCA+CGG - chr8.1:39387588-39387607 MS.gene009119:CDS 40.0%
TTCAAGTCAGGAACAGAACA+AGG - chr8.1:39389933-39389952 MS.gene009119:intron 40.0%
TTCCAAGCAAACATGAGAAG+AGG + chr8.1:39388837-39388856 None:intergenic 40.0%
TTTACCACGAGAAAACAAGG+AGG + chr8.1:39386838-39386857 None:intergenic 40.0%
! AATGTACTTTCAGGTGGGAA+TGG - chr8.1:39387930-39387949 MS.gene009119:CDS 40.0%
! ACTTGCACCGATGGTTTAAT+CGG + chr8.1:39388011-39388030 None:intergenic 40.0%
! CAATCTAAAATGTCGGTGCA+TGG + chr8.1:39389251-39389270 None:intergenic 40.0%
! CACGCAAAGCATTTGATCAA+GGG - chr8.1:39388306-39388325 MS.gene009119:intron 40.0%
! CTTTGCCTTGTTCTTTAACC+AGG - chr8.1:39389717-39389736 MS.gene009119:intron 40.0%
! CTTTTGCAGCTTGCATTTAC+TGG - chr8.1:39389556-39389575 MS.gene009119:CDS 40.0%
! TCGATCTTTGTTTCGTGTAG+AGG - chr8.1:39389454-39389473 MS.gene009119:intron 40.0%
! TCTAGAACAAGCCTGAATCT+TGG - chr8.1:39389528-39389547 MS.gene009119:CDS 40.0%
! TGTTCTGTTCCTGACTTGAA+TGG + chr8.1:39389933-39389952 None:intergenic 40.0%
! TTTGGAGTTTGTCTGTGATC+AGG - chr8.1:39388188-39388207 MS.gene009119:CDS 40.0%
!! CATGGTTGGTACTACTTTTG+TGG - chr8.1:39387427-39387446 MS.gene009119:intron 40.0%
!! TGCTTTTAGCTGCCAATTGA+AGG + chr8.1:39389606-39389625 None:intergenic 40.0%
!! TTTACTGGTTCAACCGATAC+TGG - chr8.1:39389571-39389590 MS.gene009119:CDS 40.0%
!!! CACAGACATGAGTTTTTAGC+AGG + chr8.1:39387772-39387791 None:intergenic 40.0%
AACATTGGATCCAAGGACAG+GGG - chr8.1:39388223-39388242 MS.gene009119:CDS 45.0%
AATCTTATCTGCCCAACCTG+GGG + chr8.1:39388721-39388740 None:intergenic 45.0%
AATGGCGCTACACTTGAAAC+TGG - chr8.1:39390248-39390267 MS.gene009119:intron 45.0%
ACATGATATGGTCCATCAGC+TGG + chr8.1:39388759-39388778 None:intergenic 45.0%
AGCCATGCTGGATTCTTCAA+AGG + chr8.1:39391029-39391048 None:intergenic 45.0%
AGTGATTGCTCATGTTGCTG+AGG - chr8.1:39388247-39388266 MS.gene009119:intron 45.0%
ATGAGAAGAGGGAAGTTCCA+TGG + chr8.1:39388825-39388844 None:intergenic 45.0%
CAACATTGGATCCAAGGACA+GGG - chr8.1:39388222-39388241 MS.gene009119:CDS 45.0%
CACAATGACCGTAGCGAATT+AGG + chr8.1:39390025-39390044 None:intergenic 45.0%
CAGACATTGCACGAACCAAT+TGG - chr8.1:39388780-39388799 MS.gene009119:intron 45.0%
CGCCTAATTCGTTACTATGC+TGG - chr8.1:39388614-39388633 MS.gene009119:intron 45.0%
CTACAGCACGTTTCAAAGCA+CGG + chr8.1:39389905-39389924 None:intergenic 45.0%
CTACCTCCGTCCCTAATTAT+AGG + chr8.1:39387079-39387060 None:intergenic 45.0%
CTCATGTTTGCTTGGAAGGT+TGG - chr8.1:39388840-39388859 MS.gene009119:intron 45.0%
CTCTTTGAATCACCTCACCA+AGG + chr8.1:39390785-39390804 None:intergenic 45.0%
GAAACTGGAGGAGAAAGACT+TGG - chr8.1:39390263-39390282 MS.gene009119:intron 45.0%
GAATCTTATCTGCCCAACCT+GGG + chr8.1:39388722-39388741 None:intergenic 45.0%
GAGATGCTCAGTTCTCAATC+TGG + chr8.1:39390658-39390677 None:intergenic 45.0%
GCACTTGAGACTTGGGATAA+TGG - chr8.1:39388545-39388564 MS.gene009119:intron 45.0%
GGAGTTTGTGGAGAAAGCAA+AGG - chr8.1:39389878-39389897 MS.gene009119:intron 45.0%
GGCGTTCTTTCTGACATTCA+GGG - chr8.1:39389804-39389823 MS.gene009119:CDS 45.0%
GGTTGGGCAGATAAGATTCA+TGG - chr8.1:39388723-39388742 MS.gene009119:intron 45.0%
GTAGGAGATCCATTCAAGTC+AGG - chr8.1:39389921-39389940 MS.gene009119:intron 45.0%
GTGATTGCTCATGTTGCTGA+GGG - chr8.1:39388248-39388267 MS.gene009119:intron 45.0%
TAAGCTGGAAACTTAGGCCA+CGG + chr8.1:39388332-39388351 None:intergenic 45.0%
TACAGCACGTTTCAAAGCAC+GGG + chr8.1:39389904-39389923 None:intergenic 45.0%
TCAGGTGGGAATGGTTATCT+GGG - chr8.1:39387939-39387958 MS.gene009119:CDS 45.0%
TCCCTCTTCTCATGTTTGCT+TGG - chr8.1:39388832-39388851 MS.gene009119:intron 45.0%
TGAATCTTATCTGCCCAACC+TGG + chr8.1:39388723-39388742 None:intergenic 45.0%
TGGCGTTCTTTCTGACATTC+AGG - chr8.1:39389803-39389822 MS.gene009119:CDS 45.0%
TGTACATGAACGTGTGCATG+AGG - chr8.1:39389857-39389876 MS.gene009119:CDS 45.0%
TTCAGGTGGGAATGGTTATC+TGG - chr8.1:39387938-39387957 MS.gene009119:CDS 45.0%
TTGCTGGTCAGATCATTCCA+TGG - chr8.1:39388805-39388824 MS.gene009119:intron 45.0%
! AAACTCATGTCTGTGTCGGT+TGG - chr8.1:39387777-39387796 MS.gene009119:intron 45.0%
! AAGAATCCAGCATGGCTTTG+AGG - chr8.1:39391032-39391051 MS.gene009119:CDS 45.0%
! AGGAGAAAGACTTGGTAGCA+AGG - chr8.1:39390271-39390290 MS.gene009119:intron 45.0%
! CACCTTTGAAGAATCCAGCA+TGG - chr8.1:39391024-39391043 MS.gene009119:CDS 45.0%
! GATGCTGCAATTCCTTTTGG+TGG - chr8.1:39390924-39390943 MS.gene009119:intron 45.0%
! GCACGCAAAGCATTTGATCA+AGG - chr8.1:39388305-39388324 MS.gene009119:intron 45.0%
! GGACGGAGGTAGTAAGATTT+TGG - chr8.1:39387343-39387362 MS.gene009119:CDS 45.0%
! GGAGAAAGACTTGGTAGCAA+GGG - chr8.1:39390272-39390291 MS.gene009119:intron 45.0%
! GGTCTTATAATTAGGGACGG+AGG + chr8.1:39387066-39387085 None:intergenic 45.0%
! TCAAAGTATGGTCTTGCAGC+AGG - chr8.1:39390813-39390832 MS.gene009119:intron 45.0%
!! AAGCCAGTAACTTTGGAGCT+TGG - chr8.1:39389631-39389650 MS.gene009119:intron 45.0%
!! CAGTAACTTTGGAGCTTGGT+GGG - chr8.1:39389635-39389654 MS.gene009119:intron 45.0%
AAGCATTTGATCAAGGGCCG+TGG - chr8.1:39388312-39388331 MS.gene009119:intron 50.0%
ACCACGAGAAAACAAGGAGG+TGG + chr8.1:39386835-39386854 None:intergenic 50.0%
ACGTGTGCATGAGGAGTTTG+TGG - chr8.1:39389866-39389885 MS.gene009119:intron 50.0%
AGCAGACAATGGCGTCTGTT+CGG + chr8.1:39388907-39388926 None:intergenic 50.0%
AGGAACAGAACAAGGTCCTC+AGG - chr8.1:39389941-39389960 MS.gene009119:intron 50.0%
AGTGGACAGGGCAGAGAAAA+AGG - chr8.1:39390957-39390976 MS.gene009119:intron 50.0%
ATCTGACCAGCAACGCCAAT+TGG + chr8.1:39388798-39388817 None:intergenic 50.0%
CACACTCAGCTCCTAATCGA+TGG - chr8.1:39388035-39388054 MS.gene009119:intron 50.0%
CCAACATTGGATCCAAGGAC+AGG - chr8.1:39388221-39388240 MS.gene009119:CDS 50.0%
CCACCAAGCTCCAAAGTTAC+TGG + chr8.1:39389637-39389656 None:intergenic 50.0%
CCTGTCCTTGGATCCAATGT+TGG + chr8.1:39388224-39388243 None:intergenic 50.0%
CGAATTAGGCGAACCAGCAT+TGG + chr8.1:39388605-39388624 None:intergenic 50.0%
CGTTACTATGCTGGTACGTG+CGG - chr8.1:39388623-39388642 MS.gene009119:intron 50.0%
GGTCCTATAATTAGGGACGG+AGG - chr8.1:39387329-39387348 MS.gene009119:CDS 50.0%
TGCTGCTCTTGCTAGTCACA+TGG - chr8.1:39389139-39389158 MS.gene009119:intron 50.0%
TTGCAATCTGCATGCCATCC+TGG + chr8.1:39390436-39390455 None:intergenic 50.0%
! CATCGATTAGGAGCTGAGTG+TGG + chr8.1:39388037-39388056 None:intergenic 50.0%
!! CCAGTAACTTTGGAGCTTGG+TGG - chr8.1:39389634-39389653 MS.gene009119:intron 50.0%
!! CGTGCTTTGAAACGTGCTGT+AGG - chr8.1:39389903-39389922 MS.gene009119:intron 50.0%
!!! TCCACCTCCTTGTTTTCTCG+TGG - chr8.1:39386831-39386850 MS.gene009119:CDS 50.0%
AGGGACAATGTTGCTGTGCC+GGG - chr8.1:39389823-39389842 MS.gene009119:CDS 55.0%
CAACACACCAGCAGGAAGTC+CGG + chr8.1:39389087-39389106 None:intergenic 55.0%
CACGAACCAATTGGCGTTGC+TGG - chr8.1:39388789-39388808 MS.gene009119:intron 55.0%
CAGGGACAATGTTGCTGTGC+CGG - chr8.1:39389822-39389841 MS.gene009119:CDS 55.0%
GCAATCACTTCCCCTGTCCT+TGG + chr8.1:39388236-39388255 None:intergenic 55.0%
GGCGCTACACTTGAAACTGG+AGG - chr8.1:39390251-39390270 MS.gene009119:intron 55.0%
GGTGGGAATGGTTATCTGGG+TGG - chr8.1:39387942-39387961 MS.gene009119:CDS 55.0%
GTGTTGCCACACGCTAATGC+TGG + chr8.1:39388867-39388886 None:intergenic 55.0%
GTTGGACCAGCATTAGCGTG+TGG - chr8.1:39388858-39388877 MS.gene009119:intron 55.0%
TGCTTTGCGTGCAGCTGCAA+CGG + chr8.1:39388297-39388316 None:intergenic 55.0%
!! TCTGGCTTTGGTCCAACTGC+AGG - chr8.1:39389116-39389135 MS.gene009119:intron 55.0%
CTATGCTGGTACGTGCGGTG+TGG - chr8.1:39388628-39388647 MS.gene009119:intron 60.0%
GCAAGAGCAGCACCTGCAGT+TGG + chr8.1:39389131-39389150 None:intergenic 60.0%
GGGCTCACAGTTCCAGCTGA+TGG - chr8.1:39388744-39388763 MS.gene009119:intron 60.0%
TTGTAGGCCGGACTTCCTGC+TGG - chr8.1:39389077-39389096 MS.gene009119:CDS 60.0%
!! GTGTGGTCGACTTGCACCGA+TGG + chr8.1:39388020-39388039 None:intergenic 60.0%
GCTGGTACGTGCGGTGTGGA+AGG - chr8.1:39388632-39388651 MS.gene009119:intron 65.0%
GGTACGTGCGGTGTGGAAGG+TGG - chr8.1:39388635-39388654 MS.gene009119:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 39386771 39391052 39386771 ID=MS.gene009119
chr8.1 mRNA 39386771 39391052 39386771 ID=MS.gene009119.t1;Parent=MS.gene009119
chr8.1 exon 39390971 39391052 39390971 ID=MS.gene009119.t1.exon1;Parent=MS.gene009119.t1
chr8.1 CDS 39390971 39391052 39390971 ID=cds.MS.gene009119.t1;Parent=MS.gene009119.t1
chr8.1 exon 39389743 39389880 39389743 ID=MS.gene009119.t1.exon2;Parent=MS.gene009119.t1
chr8.1 CDS 39389743 39389880 39389743 ID=cds.MS.gene009119.t1;Parent=MS.gene009119.t1
chr8.1 exon 39389471 39389613 39389471 ID=MS.gene009119.t1.exon3;Parent=MS.gene009119.t1
chr8.1 CDS 39389471 39389613 39389471 ID=cds.MS.gene009119.t1;Parent=MS.gene009119.t1
chr8.1 exon 39389188 39389341 39389188 ID=MS.gene009119.t1.exon4;Parent=MS.gene009119.t1
chr8.1 CDS 39389188 39389341 39389188 ID=cds.MS.gene009119.t1;Parent=MS.gene009119.t1
chr8.1 exon 39388870 39389099 39388870 ID=MS.gene009119.t1.exon5;Parent=MS.gene009119.t1
chr8.1 CDS 39388870 39389099 39388870 ID=cds.MS.gene009119.t1;Parent=MS.gene009119.t1
chr8.1 exon 39388651 39388740 39388651 ID=MS.gene009119.t1.exon6;Parent=MS.gene009119.t1
chr8.1 CDS 39388651 39388740 39388651 ID=cds.MS.gene009119.t1;Parent=MS.gene009119.t1
chr8.1 exon 39388085 39388258 39388085 ID=MS.gene009119.t1.exon7;Parent=MS.gene009119.t1
chr8.1 CDS 39388085 39388258 39388085 ID=cds.MS.gene009119.t1;Parent=MS.gene009119.t1
chr8.1 exon 39387861 39387998 39387861 ID=MS.gene009119.t1.exon8;Parent=MS.gene009119.t1
chr8.1 CDS 39387861 39387998 39387861 ID=cds.MS.gene009119.t1;Parent=MS.gene009119.t1
chr8.1 exon 39387492 39387629 39387492 ID=MS.gene009119.t1.exon9;Parent=MS.gene009119.t1
chr8.1 CDS 39387492 39387629 39387492 ID=cds.MS.gene009119.t1;Parent=MS.gene009119.t1
chr8.1 exon 39387325 39387386 39387325 ID=MS.gene009119.t1.exon10;Parent=MS.gene009119.t1
chr8.1 CDS 39387325 39387386 39387325 ID=cds.MS.gene009119.t1;Parent=MS.gene009119.t1
chr8.1 exon 39386771 39387044 39386771 ID=MS.gene009119.t1.exon11;Parent=MS.gene009119.t1
chr8.1 CDS 39386771 39387044 39386771 ID=cds.MS.gene009119.t1;Parent=MS.gene009119.t1
Gene Sequence

>MS.gene009119

ATGGCTTCTTCAATCAAAATCTCAAGGCTTATTTCTCGATCATTTTCTTCTACTTCTTCTTCCACCTCCTTGTTTTCTCGTGGTAAATTATATCTTTACTTAATCACATATTTTATGATTATTTTCATATATCATCAAACATAATTATGTGACTTTTGTTTGTGTTTGTGTTTTTTAATTTTTTCTTTTAAATTTGTCTTTTTTAAGAAAATGATTTTCTGGGGTTGTTTTGAATTTGATTGATGATGGGATCACTGTCATGTTTTGAATTTTTGAGAAAAATAAGATACTACCTCCGTCCCTAATTATAAGACCCTTTTGAGAATATTTTTTGTCCCTTTTTATAAGACCCCTTTGCTATTTCCAACTACATTAATTATTTCTTTACACACATGCCCCTATTTATTATACATCTTTTTCTTCAATAAGCAATAAATAACATGTTGAAAACATAAACCAACACTCTCTCTTAAAGGATAAAATTGTAAAACCAATAGTAATTACAAACATATTTAATACAAATATCCACTATCTTAATTCCCGTTATTTTTTCAAAAGGGTCCTATAATTAGGGACGGAGGTAGTAAGATTTTGGAAATTTTGTCATTGTAATCTGTGTGACATGAAAGAAAGGTTTCTTTTTCTTTCATTAATTGCATGGTTGGTACTACTTTTGTGGTCTCGTTTTCATAACTGTACTTTTTGATTCTCTCACTTCACTTATAGTTATCTGATACTACTTTTTTTTTTTAATAAGAGTGCTACTCCTTTTTTGGCTATAGTAATATGAAAATTGGTTTGTACATGTTTAGATTGATGGTCTATTTGGCAGAATCACGGTGTGCCACCTTGAAATGCATGTTTAAATTAACGGTGAGATAAGTGAAATCACGGTGGCATCGTGATTTTGACAAATTGACACTAGATCCAAAGATGGACTTAACAAAAATAAGATCGACAGTGTGATTTCGTCAATCTCATTGTGATACTGACTATTTCCTGCTAAAAACTCATGTCTGTGTCGGTTGGAGATGATGTTATCTTGATTTCAATTGGTGATTAAAAGGGGTGTTTCAGTTTATGATTTTCATTAGGGGTTTAGGTTTTTTAAAGGCATTGATTGATGCTCAATGATAGATTGAATATTGAAAGGGAAAAAAATGTACTTTCAGGTGGGAATGGTTATCTGGGTGGATTACTCTCTAAATACAGCACTGCTGCTGCCATTGATGAAAAACCGATTAAACCATCGGTGCAAGTCGACCACACTCAGCTCCTAATCGATGGCAAATTTGTAGATGCTGCTGCTGGTGAGTGTTTTTTTTATTTTATTTTATTCTTTTTATACAATTTTGATTAGGAAAGAAAAGAGGATTAACTAAAGGAAAAGAAGGGTTGTTTTTGTGGTATCTTACCTTTTGGAGTTTGTCTGTGATCAGGTAGAACATTTCCAACATTGGATCCAAGGACAGGGGAAGTGATTGCTCATGTTGCTGAGGGTCACTCTGAAGATGTTGATAGAGCCGTTGCAGCTGCACGCAAAGCATTTGATCAAGGGCCGTGGCCTAAGTTTCCAGCTTATGTATGATCATTGCTTCTTCGTTTTTCTGTTTGTGATTTTTCTATTGTTTGTCAAGTCATTATATTTGGTTCAACTTCAATGAATTTGCAGTTGAGTCCACTTTTGTTTTTCTGTTTCTGTGTTTTATAGGAAAGGCAAAAGATAATGTTGCGTGCTGCTGATTTGATTGAAAAGCATAACGATGAAATTGCAGCACTTGAGACTTGGGATAATGGGAAACCATATGAACAATCTGCTCAGATTGAAATTCCAATGCTGGTTCGCCTAATTCGTTACTATGCTGGTACGTGCGGTGTGGAAGGTGGTACTAACATTTCTTCTCTTTGTTTTGTAAAACTACACTCACACTTGTATTTTCATATTTACCCCAGGTTGGGCAGATAAGATTCATGGGCTCACAGTTCCAGCTGATGGACCATATCATGTGCAGACATTGCACGAACCAATTGGCGTTGCTGGTCAGATCATTCCATGGAACTTCCCTCTTCTCATGTTTGCTTGGAAGGTTGGACCAGCATTAGCGTGTGGCAACACTGTCGTTCTAAAAACAGCCGAACAGACGCCATTGTCTGCTTTGTATGTAGCAAAACTATTTCACGAGGTTTGATACATTCACCAATCTTGCTTTAATTTATATAAATCAATACAAAAACATTGTTTTTAGTGGAGTTTATTTTAACCATAAAATATATCTTTTATCTTCATTCCTAATTTGTAATCTTTCTTGTAGGCCGGACTTCCTGCTGGTGTGTTGAATATAATATCTGGCTTTGGTCCAACTGCAGGTGCTGCTCTTGCTAGTCACATGGATGTTGATAAGGTACTAAAATATTAAGTTCTGCAATTGTGTTTTAATGTAATTATAAGTTGCTAGTATATTCAAACTGACTTCACTCCATGCACCGACATTTTAGATTGAAAGCATGTCTGGTGTCCGATATGTGTTAGTGTTTGACACTTACACGACACTGACATATATGATTACATTTAATCACTTCTATTTCGTATATTATTACTAGTCTCTATGTATCAAAGTTGTGTCCGGTGTCTGTGTTAGTGTTTCATTGCTGCAGTTACATGAAGTTATCTGTTAAAATTCTGTCGATCTTTGTTTCGTGTAGAGGTTTCAATTTCAATCGTCACGTTTTGTTTGTACATTAGTGGATTATTAAACATCTAGAACAAGCCTGAATCTTGGAAAATCTTTTGCAGCTTGCATTTACTGGTTCAACCGATACTGGAAAAGTTGTCCTTCAATTGGCAGCTAAAAGCAATCTTAAGCCAGTAACTTTGGAGCTTGGTGGGAAATCTCCATTTATTGTTTGCGAAGATGCTGATATAGATGAAGCTGTTGAGCTAGCACACTTTGCCTTGTTCTTTAACCAGGTATGTACAATCAGAGTTCTTGTTATTAAACAATTGTCTCTCCTATAATTCGGATATCATTGATTGGCGTTCTTTCTGACATTCAGGGACAATGTTGCTGTGCCGGGTCTCGAACATTTGTACATGAACGTGTGCATGAGGAGTTTGTGGAGAAAGCAAAGGCCCGTGCTTTGAAACGTGCTGTAGGAGATCCATTCAAGTCAGGAACAGAACAAGGTCCTCAGGTAAATTACAATGAATAATTTGAGTGACATCTTCATGATTAATCTTAGAGCTTTGTTTTCCTAATTCGCTACGGTCATTGTGATGTTCAGATACTAGAGGCTTTGCATAGAAGAAATCAAGAATATACTACATTGCTACTATGATATTTTCTTGTTAAACCTTAATGTTTATGACTCTTTTTTTGAAATGTCTGCATATACTGAAATTTTTCTTATGATCCAAACAATCAGATTGATTCAAAGCAATTTGAGAAAATATTGAAGTATATTAGATCTGGCGTTGATAATGGCGCTACACTTGAAACTGGAGGAGAAAGACTTGGTAGCAAGGGCTACTATATTCAGCCTACTGTCTTCTCAAATGTTCAGGTGTGTGTGTGCGTGCGCGCGTTCACGCTTATATTCTCATCTTTGCAAAGGATTTTGAAAATACAATTCCTAATGTTTTTAATTGTATCTGTAACAATCATCCAGGATGGCATGCAGATTGCAAAAGAAGAGATATTTGGTCCAGTACAAACCATATTGAAATTCAAGTGAGACCAATGAGTCTTGATTTGTAGAGAATGATATTTTCTAGTTTCAAATATATTTTTAGTCCCTTTAATGCACCCTTCATCAAATGTAGTCTATATAAAAATTTCAGTGTTGTTTAGCTCCCAATTTGACGATTTTTGCAAAAGTTGAAATCACCAGATTGAGAACTGAGCATCTCTAGAAAATTTTATAAGAGGTGTATTTTACAAGGACTAAAGACATATATTGAACCCTATTTTTATGTGCAATGCAATTAATTTTAATGTTGATTGGTTCAAGGGACCTTGGTGAGGTGATTCAAAGAGCAAACAATTCAAAGTATGGTCTTGCAGCAGGAGTTTTCACAAAGAACATAGACACTGCAAATACTTTGACTAGAGCATTGAAAGTGGGAACAGTTTGGGTAAATTGCTTTGATACATTTGATGCTGCAATTCCTTTTGGTGGATATAAGATGAGTGGACAGGGCAGAGAAAAAGGAGAATACAGTCTTAAAAACTACTTGCAAGTGAAGGCTGTTGTTACACCTTTGAAGAATCCAGCATGGCTTTGA
Protein sequence

>MS.gene009119.t1

MASSIKISRLISRSFSSTSSSTSLFSRGGNGYLGGLLSKYSTAAAIDEKPIKPSVQVDHTQLLIDGKFVDAAAGRTFPTLDPRTGEVIAHVAEGHSEDVDRAVAAARKAFDQGPWPKFPAYERQKIMLRAADLIEKHNDEIAALETWDNGKPYEQSAQIEIPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPLSALYVAKLFHEAGLPAGVLNIISGFGPTAGAALASHMDVDKLAFTGSTDTGKVVLQLAAKSNLKPVTLELGGKSPFIVCEDADIDEAVELAHFALFFNQGQCCCAGSRTFVHERVHEEFVEKAKARALKRAVGDPFKSGTEQGPQIDSKQFEKILKYIRSGVDNGATLETGGERLGSKGYYIQPTVFSNVQDGMQIAKEEIFGPVQTILKFKDLGEVIQRANNSKYGLAAGVFTKNIDTANTLTRALKVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL