AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038583

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038583.t1 MTR_8g064170 98.336 541 8 1 1 540 1 541 0.0 1097
MS.gene038583.t1 MTR_8g064170 92.421 541 8 2 1 540 1 509 0.0 1016
MS.gene038583.t1 MTR_3g078170 75.322 543 121 2 10 540 1 542 0.0 874
MS.gene038583.t1 MTR_4g107040 80.318 503 98 1 38 540 43 544 0.0 870
MS.gene038583.t1 MTR_3g078170 73.407 455 108 2 10 452 1 454 0.0 716
MS.gene038583.t1 MTR_3g078170 73.148 432 103 2 10 429 1 431 0.0 679
MS.gene038583.t1 MTR_3g078170 73.148 432 103 2 10 429 1 431 0.0 679
MS.gene038583.t1 MTR_6g086300 58.058 484 203 0 57 540 19 502 0.0 580
MS.gene038583.t1 MTR_6g086300 58.058 484 203 0 57 540 19 502 0.0 580
MS.gene038583.t1 MTR_8g083530 54.545 484 220 0 57 540 20 503 0.0 564
MS.gene038583.t1 MTR_6g086340 55.785 484 214 0 57 540 17 500 0.0 552
MS.gene038583.t1 MTR_8g083520 51.324 491 206 1 50 540 4 461 0.0 521
MS.gene038583.t1 MTR_8g083520 50.242 414 173 1 127 540 1 381 3.48e-147 428
MS.gene038583.t1 MTR_8g083530 53.636 330 153 0 57 386 20 349 9.30e-125 370
MS.gene038583.t1 MTR_3g078550 38.945 493 288 6 57 539 5 494 6.78e-115 350
MS.gene038583.t1 MTR_4g106510 40.404 495 282 6 55 539 3 494 6.60e-113 345
MS.gene038583.t1 MTR_3g078550 40.397 453 257 6 97 539 15 464 3.86e-109 334
MS.gene038583.t1 MTR_3g078490 38.153 498 291 6 54 539 32 524 6.88e-109 335
MS.gene038583.t1 MTR_2g067660 38.755 498 297 5 37 530 21 514 2.14e-104 323
MS.gene038583.t1 MTR_1690s0010 44.575 341 184 4 61 399 10 347 4.15e-83 263
MS.gene038583.t1 MTR_3g078490 36.443 343 207 5 54 388 2 341 3.13e-62 209
MS.gene038583.t1 MTR_1g014320 31.557 488 306 10 65 539 21 493 6.54e-61 209
MS.gene038583.t1 MTR_2g034160 30.078 512 319 11 50 531 26 528 3.83e-60 209
MS.gene038583.t1 MTR_2g042330 30.867 473 308 11 66 526 23 488 6.75e-59 204
MS.gene038583.t1 MTR_4g131180 30.943 488 309 10 65 539 21 493 1.64e-58 202
MS.gene038583.t1 MTR_4g131180 31.350 437 281 8 65 493 21 446 1.27e-54 191
MS.gene038583.t1 MTR_2g009750 31.276 486 312 11 63 536 18 493 2.60e-54 191
MS.gene038583.t1 MTR_2g009750 31.134 485 313 11 63 536 18 492 1.86e-53 189
MS.gene038583.t1 MTR_2g009750 31.134 485 313 11 63 536 17 491 2.13e-53 189
MS.gene038583.t1 MTR_4g093170 31.200 500 307 13 58 536 37 520 7.26e-53 188
MS.gene038583.t1 MTR_1399s0020 28.650 363 207 5 168 528 23 335 1.32e-39 147
MS.gene038583.t1 MTR_8g076480 29.047 451 284 14 98 531 8 439 3.22e-36 141
MS.gene038583.t1 MTR_1222s0010 32.410 361 215 11 129 476 33 377 2.25e-34 138
MS.gene038583.t1 MTR_1g029840 28.868 433 290 11 107 531 24 446 1.27e-33 134
MS.gene038583.t1 MTR_1g029840 28.079 406 278 9 133 531 48 446 1.85e-31 127
MS.gene038583.t1 MTR_8g094600 27.235 481 326 14 61 531 33 499 2.25e-30 125
MS.gene038583.t1 MTR_2g097950 29.103 457 287 16 93 530 14 452 7.34e-30 123
MS.gene038583.t1 MTR_3g088150 27.169 438 299 13 103 531 22 448 2.12e-29 121
MS.gene038583.t1 MTR_1314s0010 29.480 346 222 7 197 530 1 336 3.76e-28 115
MS.gene038583.t1 MTR_2g097950 26.304 460 279 14 85 530 4 417 1.68e-24 107
MS.gene038583.t1 MTR_4g065040 28.401 419 262 15 133 531 38 438 1.67e-20 95.1
MS.gene038583.t1 MTR_0002s0820 45.833 120 48 2 240 342 29 148 6.72e-20 87.4
MS.gene038583.t1 MTR_4g107940 25.061 411 271 15 63 450 54 450 2.16e-11 66.6
MS.gene038583.t1 MTR_4g107940 25.061 411 271 15 63 450 54 450 2.45e-11 66.6
MS.gene038583.t1 MTR_8g064020 89.286 28 3 0 513 540 53 80 3.82e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038583.t1 AT3G48000 77.009 535 122 1 6 540 5 538 0.0 880
MS.gene038583.t1 AT1G23800 81.275 502 94 0 39 540 33 534 0.0 873
MS.gene038583.t1 AT1G23800 82.081 346 62 0 39 384 33 378 0.0 614
MS.gene038583.t1 AT3G24503 55.556 486 215 1 56 540 16 501 0.0 560
MS.gene038583.t1 AT3G48170 41.935 496 275 6 54 539 2 494 5.37e-130 389
MS.gene038583.t1 AT1G74920 41.309 489 274 6 61 539 9 494 7.44e-124 373
MS.gene038583.t1 AT1G74920 41.513 489 268 7 61 539 9 489 3.54e-122 368
MS.gene038583.t1 AT1G79440 40.381 473 277 4 59 530 52 520 4.89e-105 325
MS.gene038583.t1 AT2G24270 32.114 492 298 11 65 539 21 493 2.46e-59 204
MS.gene038583.t1 AT2G24270 32.114 492 298 11 65 539 21 493 2.46e-59 204
MS.gene038583.t1 AT2G24270 32.114 492 298 11 65 539 21 493 3.45e-59 204
MS.gene038583.t1 AT1G54100 31.263 467 299 12 72 526 31 487 6.78e-59 204
MS.gene038583.t1 AT1G54100 31.263 467 299 12 72 526 31 487 6.78e-59 204
MS.gene038583.t1 AT2G24270 32.114 492 298 11 65 539 61 533 8.80e-59 204
MS.gene038583.t1 AT3G66658 28.487 509 331 10 50 531 26 528 6.46e-58 202
MS.gene038583.t1 AT3G66658 28.487 509 331 10 50 531 26 528 1.74e-57 202
MS.gene038583.t1 AT2G14170 33.030 439 277 10 63 493 8 437 2.87e-57 199
MS.gene038583.t1 AT2G14170 33.030 439 277 10 63 493 117 546 1.44e-56 199
MS.gene038583.t1 AT2G14170 31.417 487 310 12 63 536 117 592 1.82e-56 199
MS.gene038583.t1 AT1G44170 29.054 444 297 12 96 531 9 442 3.92e-39 149
MS.gene038583.t1 AT1G44170 29.054 444 297 12 96 531 9 442 3.92e-39 149
MS.gene038583.t1 AT1G44170 30.259 347 232 8 188 531 40 379 2.50e-34 134
MS.gene038583.t1 AT4G36250 27.851 456 296 16 93 531 2 441 2.13e-32 130
MS.gene038583.t1 AT4G34240 28.736 348 236 8 188 531 24 363 3.26e-28 117
MS.gene038583.t1 AT4G34240 28.736 348 236 8 188 531 166 505 2.33e-27 116
MS.gene038583.t1 AT4G34240 28.736 348 236 8 188 531 151 490 2.79e-27 115
MS.gene038583.t1 AT4G34240 38.065 155 91 4 188 341 166 316 4.72e-15 77.4
MS.gene038583.t1 AT5G62530 24.096 415 277 15 60 450 53 453 9.37e-11 64.7

Find 119 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGGTGGGAATGGTTATC+TGG 0.219323 8.3:-38012716 MS.gene038583:intron
AGTGGACAGGGCAGAGAAAA+AGG 0.274646 8.3:-38009816 MS.gene038583:CDS
CACGAACCAATTGGCGTTGC+TGG 0.282957 8.3:-38011865 MS.gene038583:CDS
GTCTCACTTGAATTTCAATA+TGG 0.295168 8.3:+38010304 None:intergenic
TTTACTGGTTCAACTGATAC+TGG 0.300808 8.3:-38011233 MS.gene038583:CDS
TCTTCTCATGTTTGCTTGGA+AGG 0.308492 8.3:-38011818 MS.gene038583:CDS
CTCATGTTTGCTTGGAAGGT+TGG 0.312209 8.3:-38011814 MS.gene038583:CDS
GCACTTGAGACTTGGGATAA+TGG 0.315242 8.3:-38012109 MS.gene038583:CDS
CCACCAAGCTCCAAAGTTAC+CGG 0.326290 8.3:+38011170 None:intergenic
TTTGATGCTGCAATTCCTTT+TGG 0.326962 8.3:-38009852 MS.gene038583:CDS
CATTGAAAGTTGGAACAGTT+TGG 0.327575 8.3:-38009893 MS.gene038583:CDS
ATCTGAGCAGATTGTTCATA+TGG 0.331515 8.3:+38012082 None:intergenic
ATTGCAAAAGAAGAGATATT+TGG 0.335473 8.3:-38010338 MS.gene038583:CDS
ACATACCTGGTTGAAGAATA+AGG 0.339394 8.3:+38011082 None:intergenic
CACTTGAGACTTGGGATAAT+GGG 0.341726 8.3:-38012108 MS.gene038583:CDS
TACTGTCTTCTCAAATGTTC+AGG 0.364449 8.3:-38010477 MS.gene038583:intron
CTACAAATTTGCCATCGATT+AGG 0.366038 8.3:+38012608 None:intergenic
ATTGAAAGTTGGAACAGTTT+GGG 0.367636 8.3:-38009892 MS.gene038583:CDS
CAATCTTAAGCCGGTAACTT+TGG 0.372001 8.3:-38011180 MS.gene038583:CDS
ACTTGCACCGATGGTTTAAT+CGG 0.379104 8.3:+38012646 None:intergenic
ATTAGATCTGGCGTTGATAA+TGG 0.379386 8.3:-38010557 MS.gene038583:CDS
AGAGCAAACAATTCAAAGTA+TGG 0.393602 8.3:-38009972 MS.gene038583:CDS
TCCCTCTTCTCATGTTTGCT+TGG 0.401686 8.3:-38011822 MS.gene038583:CDS
TTGAACATAATATCTGGCTT+TGG 0.404964 8.3:-38011557 MS.gene038583:CDS
CAGGGACAATGTTGCTGTGC+CGG 0.407196 8.3:-38010980 MS.gene038583:CDS
AATTTCAATATGGTTTGTAC+TGG 0.414009 8.3:+38010314 None:intergenic
TGTTCTGTTCCTGACTTGAA+TGG 0.414781 8.3:+38010872 None:intergenic
TTGTAGGCTGGACTTCCTCC+TGG 0.416956 8.3:-38011584 MS.gene038583:intron
TGCAATGTCTGCACATGATA+TGG 0.425470 8.3:+38011886 None:intergenic
TACCAGCATAGTAACGAATT+AGG 0.432343 8.3:+38012038 None:intergenic
AGCAATGATCATACATAAGC+TGG 0.439518 8.3:+38012310 None:intergenic
ATCTGACCAGCAACGCCAAT+TGG 0.441277 8.3:+38011859 None:intergenic
CATACATAAGCTGGAAACTT+AGG 0.447847 8.3:+38012319 None:intergenic
CAGACATTGCACGAACCAAT+TGG 0.452449 8.3:-38011874 MS.gene038583:CDS
AAGCCGGTAACTTTGGAGCT+TGG 0.455012 8.3:-38011173 MS.gene038583:CDS
AATGGCGCTACACTTGAAAC+TGG 0.456541 8.3:-38010539 MS.gene038583:CDS
CGCCTAATTCGTTACTATGC+TGG 0.456816 8.3:-38012040 MS.gene038583:intron
CGAATTAGGCGAACCAGCAT+TGG 0.458512 8.3:+38012052 None:intergenic
AAATTGCAGCACTTGAGACT+TGG 0.458601 8.3:-38012117 MS.gene038583:CDS
GCATCGTCGCAAACAATAAA+CGG 0.459074 8.3:+38011140 None:intergenic
GCAATCACTTCCCCTGTCCT+TGG 0.470122 8.3:+38012421 None:intergenic
TTGACTAGAGCATTGAAAGT+TGG 0.470715 8.3:-38009903 MS.gene038583:CDS
GCACGCAAAGCATTTGATCA+AGG 0.473740 8.3:-38012349 MS.gene038583:CDS
GGTTGGGCAGATAAGATTCA+TGG 0.473931 8.3:-38011931 MS.gene038583:CDS
TGCTTTGCGTGCAGCTGCAA+CGG 0.475234 8.3:+38012360 None:intergenic
TGGAAAAGTTGTCCTTCAAC+TGG 0.479571 8.3:-38011213 MS.gene038583:CDS
CCGGTAACTTTGGAGCTTGG+TGG 0.486152 8.3:-38011170 MS.gene038583:CDS
AATGTACTTTCAGGTGGGAA+TGG 0.487239 8.3:-38012724 MS.gene038583:intron
AGGGACAATGTTGCTGTGCC+GGG 0.490364 8.3:-38010979 MS.gene038583:CDS
TCAAAGTATGGTCTTGCAGC+AGG 0.491649 8.3:-38009960 MS.gene038583:CDS
TAGTCACATGGATGTTGATA+AGG 0.496076 8.3:-38011510 MS.gene038583:intron
TCAGATTGAAATTCCAATGC+TGG 0.496455 8.3:-38012065 MS.gene038583:CDS
TCTGGCTTTGGTCCAACTGC+AGG 0.500521 8.3:-38011545 MS.gene038583:CDS
CCAACATTGGATCCAAGGAC+AGG 0.507885 8.3:-38012433 MS.gene038583:CDS
CCTGTCCTTGGATCCAATGT+TGG 0.511997 8.3:+38012433 None:intergenic
CTCATCTTATATCCACCAAA+AGG 0.515568 8.3:+38009837 None:intergenic
ATATTGAAGTATATTAGATC+TGG 0.517435 8.3:-38010569 MS.gene038583:CDS
CGGTAACTTTGGAGCTTGGT+GGG 0.520556 8.3:-38011169 MS.gene038583:CDS
CTTCTTCAATCAAAATCTCA+AGG 0.522051 8.3:-38013620 MS.gene038583:CDS
GGGCTCACAGTTCCAGCTGA+TGG 0.526400 8.3:-38011910 MS.gene038583:CDS
TTGGAAGGTTGGACCTGCAT+TGG 0.527909 8.3:-38011803 MS.gene038583:CDS
GTAGGAGATCCATTCAAGTC+AGG 0.532267 8.3:-38010881 MS.gene038583:CDS
TCAGGTGGGAATGGTTATCT+GGG 0.532469 8.3:-38012715 MS.gene038583:intron
AATTGCAGCACTTGAGACTT+GGG 0.535187 8.3:-38012116 MS.gene038583:CDS
AGGTAAAACATTTCCAACAT+TGG 0.536576 8.3:-38012446 MS.gene038583:CDS
TGGATATAAGATGAGTGGAC+AGG 0.537139 8.3:-38009829 MS.gene038583:CDS
CTTTGCCTTATTCTTCAACC+AGG 0.537670 8.3:-38011087 MS.gene038583:intron
AGGAACAGAACAAGGTCCTC+AGG 0.538549 8.3:-38010861 MS.gene038583:intron
ACAGATGCTCAAAGCCATGC+TGG 0.538877 8.3:+38009735 None:intergenic
ATGAGAAGAGGGAAGTTCCA+TGG 0.539559 8.3:+38011832 None:intergenic
GTGTTGCCACACGCCAATGC+AGG 0.541029 8.3:+38011790 None:intergenic
CATTTCCAACATTGGATCCA+AGG 0.543139 8.3:-38012438 MS.gene038583:CDS
ACATGATATGGTCCATCAGC+TGG 0.548696 8.3:+38011898 None:intergenic
GTGTGGTCGACTTGCACCGA+TGG 0.550868 8.3:+38012637 None:intergenic
GCAAGAGCAGCACCTGCAGT+TGG 0.553046 8.3:+38011533 None:intergenic
TGCTGCTCTTGCTAGTCACA+TGG 0.554143 8.3:-38011522 MS.gene038583:CDS
AGCTAAAAGCAATCTTAAGC+CGG 0.554195 8.3:-38011189 MS.gene038583:CDS
CACGCAAAGCATTTGATCAA+GGG 0.557713 8.3:-38012348 MS.gene038583:CDS
GTTGATTGATTCAGGGACCT+TGG 0.558478 8.3:-38010008 MS.gene038583:intron
TACAGCACGTTTCAAAGCAC+GGG 0.560601 8.3:+38010901 None:intergenic
CAACATTGGATCCAAGGACA+GGG 0.563764 8.3:-38012432 MS.gene038583:CDS
AAGCATTTGATCAAGGGCCG+TGG 0.572236 8.3:-38012342 MS.gene038583:CDS
AAATTTGTAGATGCTGCTGC+TGG 0.577592 8.3:-38012595 MS.gene038583:intron
CTACAGCACGTTTCAAAGCA+CGG 0.582648 8.3:+38010900 None:intergenic
TCCAAGCAAACATGAGAAGA+GGG 0.585819 8.3:+38011821 None:intergenic
AGGAGAAAGACTTGGTAGCA+AGG 0.587482 8.3:-38010516 MS.gene038583:CDS
ATGTACAAATGTTCGAGACC+CGG 0.588405 8.3:+38010961 None:intergenic
AGTGATTGCTCATGTTGCTG+AGG 0.588599 8.3:-38012407 MS.gene038583:CDS
TTTGGTGGATATAAGATGAG+TGG 0.589571 8.3:-38009834 MS.gene038583:CDS
CTCTTTGAATCACCTCACCA+AGG 0.589796 8.3:+38009991 None:intergenic
TTCAAGTCAGGAACAGAACA+AGG 0.593415 8.3:-38010869 MS.gene038583:CDS
GGATATAAGATGAGTGGACA+GGG 0.593641 8.3:-38009828 MS.gene038583:CDS
CACCTTTGAAGAATCCAGCA+TGG 0.596410 8.3:-38009749 MS.gene038583:CDS
GTTGGGCAGATAAGATTCAT+GGG 0.597943 8.3:-38011930 MS.gene038583:CDS
TTCCAAGCAAACATGAGAAG+AGG 0.599102 8.3:+38011820 None:intergenic
GGAGAAAGACTTGGTAGCAA+GGG 0.599344 8.3:-38010515 MS.gene038583:CDS
CGTGCTTTGAAACGTGCTGT+AGG 0.601175 8.3:-38010899 MS.gene038583:CDS
GGTGGGAATGGTTATCTGGG+TGG 0.605677 8.3:-38012712 MS.gene038583:CDS
ACCACGAGAAAACAAGGAGG+TGG 0.610351 8.3:+38013563 None:intergenic
AGCCATGCTGGATTCTTCAA+AGG 0.612311 8.3:+38009747 None:intergenic
TAATTTACCACGAGAAAACA+AGG 0.622670 8.3:+38013557 None:intergenic
TTGCTGGTCAGATCATTCCA+TGG 0.623473 8.3:-38011849 MS.gene038583:CDS
GAAACTGGAGGAGAAAGACT+TGG 0.623804 8.3:-38010524 MS.gene038583:CDS
CACACTCAGCTCCTAATCGA+TGG 0.626153 8.3:-38012619 MS.gene038583:CDS
TGAACATTTGAGAAGACAGT+AGG 0.631599 8.3:+38010479 None:intergenic
GCTACATACAAAGCAGACAA+TGG 0.633191 8.3:+38011739 None:intergenic
GATATTATGTTCAAAACACC+AGG 0.634494 8.3:+38011566 None:intergenic
GTGATTGCTCATGTTGCTGA+GGG 0.636914 8.3:-38012406 MS.gene038583:CDS
GGCGCTACACTTGAAACTGG+AGG 0.646681 8.3:-38010536 MS.gene038583:CDS
GTTGGACCTGCATTGGCGTG+TGG 0.651240 8.3:-38011796 MS.gene038583:CDS
TAAGCTGGAAACTTAGGCCA+CGG 0.652576 8.3:+38012325 None:intergenic
GGAGTTTGTTGAGAAAGCAA+AGG 0.658022 8.3:-38010924 MS.gene038583:CDS
TTGATTCAGGGACCTTGGTG+AGG 0.661696 8.3:-38010003 MS.gene038583:intron
TGTAGCAAAACTATTTCACG+AGG 0.677900 8.3:-38011722 MS.gene038583:intron
TGTACATGAACGTGTGCATG+AGG 0.681956 8.3:-38010945 MS.gene038583:CDS
AACATTGGATCCAAGGACAG+GGG 0.683175 8.3:-38012431 MS.gene038583:CDS
CATCGATTAGGAGCTGAGTG+TGG 0.695634 8.3:+38012620 None:intergenic
ATTATGTTCAAAACACCAGG+AGG 0.713074 8.3:+38011569 None:intergenic
TTTACCACGAGAAAACAAGG+AGG 0.806523 8.3:+38013560 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAAATTAAAACAAGAT+TGG + chr8.3:38011684-38011703 None:intergenic 10.0%
!! ATGATAAATTGAATATTGAA+AGG - chr8.3:38010614-38010633 MS.gene038583:intron 15.0%
!!! ATTTCAATTGATGATTAAAA+GGG - chr8.3:38010529-38010548 MS.gene038583:CDS 15.0%
!!! CTTTTTATACAATTTTGATT+AGG - chr8.3:38010822-38010841 MS.gene038583:intron 15.0%
!!! TTTTAAGAAAATGATTTTCT+GGG - chr8.3:38009969-38009988 MS.gene038583:CDS 15.0%
!!! TTTTTAAGAAAATGATTTTC+TGG - chr8.3:38009968-38009987 MS.gene038583:CDS 15.0%
!! ATATTGAAGTATATTAGATC+TGG - chr8.3:38012798-38012817 MS.gene038583:intron 20.0%
!! CAGATACAATTAAAAACATT+AGG + chr8.3:38012983-38013002 None:intergenic 20.0%
!! GAAATGCATGTTTAAATTAA+CGG - chr8.3:38010335-38010354 MS.gene038583:CDS 20.0%
!! TAATTTAAACATGCATTTCA+AGG + chr8.3:38010334-38010353 None:intergenic 20.0%
!! TTTAATCATCAATTGAAATC+AGG + chr8.3:38010528-38010547 None:intergenic 20.0%
!!! AGCAAAGATGATATATTTTA+TGG + chr8.3:38011748-38011767 None:intergenic 20.0%
!!! ATTTTAATGTTGATTGATTC+AGG - chr8.3:38013351-38013370 MS.gene038583:intron 20.0%
!!! CAATATAAAAGCATTGTTTT+TGG - chr8.3:38011707-38011726 MS.gene038583:intron 20.0%
!!! GATAAGATAAGATAAGATTT+TGG - chr8.3:38010054-38010073 MS.gene038583:intron 20.0%
!!! GATTTCAATTGATGATTAAA+AGG - chr8.3:38010528-38010547 MS.gene038583:CDS 20.0%
!!! TAATTTGTAATCTTTCTTGT+AGG - chr8.3:38011767-38011786 MS.gene038583:CDS 20.0%
!!! TCACTAGAAAATTTTATAAG+AGG - chr8.3:38013254-38013273 MS.gene038583:intron 20.0%
!!! TCAGTTTATGATTTTCATTA+GGG - chr8.3:38010557-38010576 MS.gene038583:CDS 20.0%
!!! TTCAGTTTATGATTTTCATT+AGG - chr8.3:38010556-38010575 MS.gene038583:CDS 20.0%
!!! TTTAAGAAAATGATTTTCTG+GGG - chr8.3:38009970-38009989 MS.gene038583:CDS 20.0%
!!! TTTCAATTGATGATTAAAAG+GGG - chr8.3:38010530-38010549 MS.gene038583:CDS 20.0%
!!! TTTCTGTTTATGTGTTTTAT+AGG - chr8.3:38011173-38011192 MS.gene038583:CDS 20.0%
!!! TTTTAATGTTGATTGATTCA+GGG - chr8.3:38013352-38013371 MS.gene038583:intron 20.0%
!!! TTTTGAATTTGATTGATGAT+AGG - chr8.3:38009996-38010015 MS.gene038583:CDS 20.0%
!!! TTTTTCTTTCATTAATTGCA+TGG - chr8.3:38010120-38010139 MS.gene038583:intron 20.0%
! AAAAAAAATGTACTTTCAGG+TGG - chr8.3:38010637-38010656 MS.gene038583:intron 25.0%
! AAGAAAAGAGGATTAACTAA+AGG - chr8.3:38010846-38010865 MS.gene038583:intron 25.0%
! AGGAAAAAAAATGTACTTTC+AGG - chr8.3:38010634-38010653 MS.gene038583:intron 25.0%
! ATATAGACTACATTTGATGA+AGG + chr8.3:38013158-38013177 None:intergenic 25.0%
! ATTGCAAAAGAAGAGATATT+TGG - chr8.3:38013029-38013048 MS.gene038583:intron 25.0%
! CATAAACAGAAAAACAAAAG+TGG + chr8.3:38011165-38011184 None:intergenic 25.0%
! GATTAACTAAAGGAAAAGAA+GGG - chr8.3:38010856-38010875 MS.gene038583:intron 25.0%
! GGCTATAGTAATATGAAAAT+TGG - chr8.3:38010258-38010277 MS.gene038583:intron 25.0%
! GTTTGTCAAGTCATTATATT+TGG - chr8.3:38011111-38011130 MS.gene038583:CDS 25.0%
! TATAGACTACATTTGATGAA+GGG + chr8.3:38013157-38013176 None:intergenic 25.0%
! TTATATTCTCATCTTTGCAA+AGG - chr8.3:38012940-38012959 MS.gene038583:intron 25.0%
! TTTGAATCAATCTGATTGTT+TGG + chr8.3:38012765-38012784 None:intergenic 25.0%
! TTTGTACATGTTTAGATTGA+TGG - chr8.3:38010281-38010300 MS.gene038583:intron 25.0%
!! AAAAAAATGTACTTTCAGGT+GGG - chr8.3:38010638-38010657 MS.gene038583:intron 25.0%
!! AATTTCAATATGGTTTGTAC+TGG + chr8.3:38013056-38013075 None:intergenic 25.0%
!! ATTTTTGTTAAGTCCATCTT+TGG + chr8.3:38010414-38010433 None:intergenic 25.0%
!! CAGTTTATGATTTTCATTAG+GGG - chr8.3:38010558-38010577 MS.gene038583:CDS 25.0%
!! GTTTATGTGTTTTATAGGAA+AGG - chr8.3:38011178-38011197 MS.gene038583:CDS 25.0%
!!! ATAAATCAAATAGCACTGAT+TGG - chr8.3:38012348-38012367 MS.gene038583:CDS 25.0%
!!! TATAAAAGCATTGTTTTTGG+TGG - chr8.3:38011710-38011729 MS.gene038583:intron 25.0%
!!! TATAAGAGGTGTATTTTACA+AGG - chr8.3:38013268-38013287 MS.gene038583:intron 25.0%
!!! TTTAATCGGTTTTTCATCAA+TGG + chr8.3:38010710-38010729 None:intergenic 25.0%
!!! TTTTGATTAGGAAAGAAAAG+AGG - chr8.3:38010834-38010853 MS.gene038583:intron 25.0%
ACTTTATGATTGAACATACC+TGG + chr8.3:38012301-38012320 None:intergenic 30.0%
AGAGCAAACAATTCAAAGTA+TGG - chr8.3:38013395-38013414 MS.gene038583:intron 30.0%
AGGTAAAACATTTCCAACAT+TGG - chr8.3:38010921-38010940 MS.gene038583:CDS 30.0%
ATTGAAAGTTGGAACAGTTT+GGG - chr8.3:38013475-38013494 MS.gene038583:intron 30.0%
CAAAAGAGTCACAAACATTA+AGG + chr8.3:38012706-38012725 None:intergenic 30.0%
CTTCTTCAATCAAAATCTCA+AGG - chr8.3:38009747-38009766 MS.gene038583:CDS 30.0%
GATATTATGTTCAAAACACC+AGG + chr8.3:38011804-38011823 None:intergenic 30.0%
GGATTAACTAAAGGAAAAGA+AGG - chr8.3:38010855-38010874 MS.gene038583:intron 30.0%
GTCTCACTTGAATTTCAATA+TGG + chr8.3:38013066-38013085 None:intergenic 30.0%
TAAAAACTACTTGCAAGTGA+AGG - chr8.3:38013586-38013605 MS.gene038583:CDS 30.0%
TAATTTACCACGAGAAAACA+AGG + chr8.3:38009813-38009832 None:intergenic 30.0%
TATTCGTTGTAATTTACCTG+AGG + chr8.3:38012525-38012544 None:intergenic 30.0%
TCATGATTAATCTTAGAGCT+TGG - chr8.3:38012560-38012579 MS.gene038583:intron 30.0%
TCTTTCATTAATTGCATGGT+TGG - chr8.3:38010124-38010143 MS.gene038583:intron 30.0%
TGAAAAACCGATTAAACCAT+CGG - chr8.3:38010714-38010733 MS.gene038583:intron 30.0%
TTCGCAAAAATCGTCAAATT+GGG + chr8.3:38013204-38013223 None:intergenic 30.0%
TTTAAACATGCATTTCAAGG+TGG + chr8.3:38010331-38010350 None:intergenic 30.0%
TTTCGCAAAAATCGTCAAAT+TGG + chr8.3:38013205-38013224 None:intergenic 30.0%
! ATGATTTTCATTAGGGGTTT+AGG - chr8.3:38010564-38010583 MS.gene038583:CDS 30.0%
! ATGCCTTCAATCTAAAATGT+CGG + chr8.3:38011964-38011983 None:intergenic 30.0%
! GTTTAGATTGATGGTCTATT+TGG - chr8.3:38010290-38010309 MS.gene038583:intron 30.0%
! TGTATTTTCATATTTACCCC+AGG - chr8.3:38011415-38011434 MS.gene038583:intron 30.0%
! TTGAACATAATATCTGGCTT+TGG - chr8.3:38011810-38011829 MS.gene038583:CDS 30.0%
! TTTTGTGGTATCTTACCTTT+TGG - chr8.3:38010883-38010902 MS.gene038583:CDS 30.0%
!! GGTGTTTTGAACATAATATC+TGG - chr8.3:38011804-38011823 MS.gene038583:CDS 30.0%
!! TTGGTTTTCCTAATTCTCTA+CGG - chr8.3:38012579-38012598 MS.gene038583:intron 30.0%
!!! TAAGAGTGCTACTACTTTTT+TGG - chr8.3:38010237-38010256 MS.gene038583:intron 30.0%
!!! TAGGGGTTTAGGTTTTTTAA+AGG - chr8.3:38010575-38010594 MS.gene038583:CDS 30.0%
ACATACCTGGTTGAAGAATA+AGG + chr8.3:38012288-38012307 None:intergenic 35.0%
AGCAATGATCATACATAAGC+TGG + chr8.3:38011060-38011079 None:intergenic 35.0%
AGCTAAAAGCAATCTTAAGC+CGG - chr8.3:38012178-38012197 MS.gene038583:intron 35.0%
ATCTGAGCAGATTGTTCATA+TGG + chr8.3:38011288-38011307 None:intergenic 35.0%
ATCTGTGTGACATGAAAGAA+AGG - chr8.3:38010093-38010112 MS.gene038583:intron 35.0%
ATTATGTTCAAAACACCAGG+AGG + chr8.3:38011801-38011820 None:intergenic 35.0%
ATTGACACTAGATCCAAAGA+TGG - chr8.3:38010398-38010417 MS.gene038583:intron 35.0%
CAAAAGATTGTCCAAGATTC+AGG + chr8.3:38012105-38012124 None:intergenic 35.0%
CATACATAAGCTGGAAACTT+AGG + chr8.3:38011051-38011070 None:intergenic 35.0%
CATTGAAAGTTGGAACAGTT+TGG - chr8.3:38013474-38013493 MS.gene038583:intron 35.0%
CCAAAAACTCATGTTTGTGT+TGG - chr8.3:38010486-38010505 MS.gene038583:CDS 35.0%
CTCATCTTATATCCACCAAA+AGG + chr8.3:38013533-38013552 None:intergenic 35.0%
CTCTACAAATCAAGACTCAT+TGG + chr8.3:38013088-38013107 None:intergenic 35.0%
TACCAGCATAGTAACGAATT+AGG + chr8.3:38011332-38011351 None:intergenic 35.0%
TACTGTCTTCTCAAATGTTC+AGG - chr8.3:38012890-38012909 MS.gene038583:intron 35.0%
TAGTCACATGGATGTTGATA+AGG - chr8.3:38011857-38011876 MS.gene038583:CDS 35.0%
TCAGATTGAAATTCCAATGC+TGG - chr8.3:38011302-38011321 MS.gene038583:intron 35.0%
TGAACATTTGAGAAGACAGT+AGG + chr8.3:38012891-38012910 None:intergenic 35.0%
TGTAGCAAAACTATTTCACG+AGG - chr8.3:38011645-38011664 MS.gene038583:intron 35.0%
TGTATCTGTAACAATCATCC+AGG - chr8.3:38012995-38013014 MS.gene038583:intron 35.0%
TTGTAATCTTTCTTGTAGGC+TGG - chr8.3:38011771-38011790 MS.gene038583:CDS 35.0%
TTGTGATGTTCAGATACTAG+AGG - chr8.3:38012605-38012624 MS.gene038583:CDS 35.0%
TTTCATATTTACCCCAGGTT+GGG - chr8.3:38011420-38011439 MS.gene038583:intron 35.0%
! AAACTCATGTTTGTGTTGGT+TGG - chr8.3:38010490-38010509 MS.gene038583:CDS 35.0%
! CAATCTAAAATGTCGGTACA+TGG + chr8.3:38011957-38011976 None:intergenic 35.0%
! CCAACACAAACATGAGTTTT+TGG + chr8.3:38010489-38010508 None:intergenic 35.0%
! CTACAAATTTGCCATCGATT+AGG + chr8.3:38010762-38010781 None:intergenic 35.0%
! TTGATGAAGGGTGCATTAAA+GGG + chr8.3:38013145-38013164 None:intergenic 35.0%
! TTTGATGAAGGGTGCATTAA+AGG + chr8.3:38013146-38013165 None:intergenic 35.0%
! TTTGATGCTGCAATTCCTTT+TGG - chr8.3:38013515-38013534 MS.gene038583:intron 35.0%
! TTTGGTGGATATAAGATGAG+TGG - chr8.3:38013533-38013552 MS.gene038583:intron 35.0%
! TTTTCATATTTACCCCAGGT+TGG - chr8.3:38011419-38011438 MS.gene038583:intron 35.0%
!! ATTAGATCTGGCGTTGATAA+TGG - chr8.3:38012810-38012829 MS.gene038583:intron 35.0%
!! GTACCGACATTTTAGATTGA+AGG - chr8.3:38011958-38011977 MS.gene038583:intron 35.0%
!! TTGACTAGAGCATTGAAAGT+TGG - chr8.3:38013464-38013483 MS.gene038583:intron 35.0%
!! TTTACTGGTTCAACTGATAC+TGG - chr8.3:38012134-38012153 MS.gene038583:CDS 35.0%
!!! GAAAAGAAGGGTTGTTTTTG+TGG - chr8.3:38010868-38010887 MS.gene038583:CDS 35.0%
AAATTGCAGCACTTGAGACT+TGG - chr8.3:38011250-38011269 MS.gene038583:intron 40.0%
AAATTTGTAGATGCTGCTGC+TGG - chr8.3:38010772-38010791 MS.gene038583:intron 40.0%
AATTGCAGCACTTGAGACTT+GGG - chr8.3:38011251-38011270 MS.gene038583:intron 40.0%
ATGTACAAATGTTCGAGACC+CGG + chr8.3:38012409-38012428 None:intergenic 40.0%
CAATCTTAAGCCGGTAACTT+TGG - chr8.3:38012187-38012206 MS.gene038583:intron 40.0%
CACAATGACCGTAGAGAATT+AGG + chr8.3:38012590-38012609 None:intergenic 40.0%
CACTTGAGACTTGGGATAAT+GGG - chr8.3:38011259-38011278 MS.gene038583:intron 40.0%
CATTTCCAACATTGGATCCA+AGG - chr8.3:38010929-38010948 MS.gene038583:CDS 40.0%
CGGTGAGATGAATGTAATCA+CGG - chr8.3:38010355-38010374 MS.gene038583:intron 40.0%
GATCACAGACAAACTCCAAA+AGG + chr8.3:38010901-38010920 None:intergenic 40.0%
GCATCGTCGCAAACAATAAA+CGG + chr8.3:38012230-38012249 None:intergenic 40.0%
GCTACATACAAAGCAGACAA+TGG + chr8.3:38011631-38011650 None:intergenic 40.0%
GGATATAAGATGAGTGGACA+GGG - chr8.3:38013539-38013558 MS.gene038583:intron 40.0%
GGTGTTCTTTCTGACATTCA+GGG - chr8.3:38012369-38012388 MS.gene038583:CDS 40.0%
GTTGGGCAGATAAGATTCAT+GGG - chr8.3:38011437-38011456 MS.gene038583:intron 40.0%
TCCAAGCAAACATGAGAAGA+GGG + chr8.3:38011549-38011568 None:intergenic 40.0%
TCTGTAACAATCATCCAGGA+TGG - chr8.3:38012999-38013018 MS.gene038583:intron 40.0%
TCTTCTCATGTTTGCTTGGA+AGG - chr8.3:38011549-38011568 MS.gene038583:CDS 40.0%
TGAGATGAATGTAATCACGG+TGG - chr8.3:38010358-38010377 MS.gene038583:intron 40.0%
TGCAATGTCTGCACATGATA+TGG + chr8.3:38011484-38011503 None:intergenic 40.0%
TGGAAAAGTTGTCCTTCAAC+TGG - chr8.3:38012154-38012173 MS.gene038583:CDS 40.0%
TGGATATAAGATGAGTGGAC+AGG - chr8.3:38013538-38013557 MS.gene038583:intron 40.0%
TGGTCTATTTGGCAGAATCA+CGG - chr8.3:38010301-38010320 MS.gene038583:intron 40.0%
TGGTGTTCTTTCTGACATTC+AGG - chr8.3:38012368-38012387 MS.gene038583:CDS 40.0%
TTCAAGTCAGGAACAGAACA+AGG - chr8.3:38012498-38012517 MS.gene038583:intron 40.0%
TTCCAAGCAAACATGAGAAG+AGG + chr8.3:38011550-38011569 None:intergenic 40.0%
TTTACCACGAGAAAACAAGG+AGG + chr8.3:38009810-38009829 None:intergenic 40.0%
! AATGTACTTTCAGGTGGGAA+TGG - chr8.3:38010643-38010662 MS.gene038583:intron 40.0%
! ACTTGCACCGATGGTTTAAT+CGG + chr8.3:38010724-38010743 None:intergenic 40.0%
! CACGCAAAGCATTTGATCAA+GGG - chr8.3:38011019-38011038 MS.gene038583:intron 40.0%
! CTTTGCCTTATTCTTCAACC+AGG - chr8.3:38012280-38012299 MS.gene038583:intron 40.0%
! CTTTTGCAGCTTGCATTTAC+TGG - chr8.3:38012119-38012138 MS.gene038583:CDS 40.0%
! GTGATGCTTTGTTCTCAATC+TGG + chr8.3:38013238-38013257 None:intergenic 40.0%
! TGTTCTGTTCCTGACTTGAA+TGG + chr8.3:38012498-38012517 None:intergenic 40.0%
! TTTGGAGTTTGTCTGTGATC+AGG - chr8.3:38010901-38010920 MS.gene038583:CDS 40.0%
!! CATGGTTGGTACTACTTTTG+TGG - chr8.3:38010138-38010157 MS.gene038583:intron 40.0%
!! GGAGTTTGTTGAGAAAGCAA+AGG - chr8.3:38012443-38012462 MS.gene038583:CDS 40.0%
!!! CACAAACATGAGTTTTTGGC+AGG + chr8.3:38010485-38010504 None:intergenic 40.0%
AACATTGGATCCAAGGACAG+GGG - chr8.3:38010936-38010955 MS.gene038583:CDS 45.0%
AATCTTATCTGCCCAACCTG+GGG + chr8.3:38011434-38011453 None:intergenic 45.0%
AATGGCGCTACACTTGAAAC+TGG - chr8.3:38012828-38012847 MS.gene038583:intron 45.0%
ACATGATATGGTCCATCAGC+TGG + chr8.3:38011472-38011491 None:intergenic 45.0%
AGCCATGCTGGATTCTTCAA+AGG + chr8.3:38013623-38013642 None:intergenic 45.0%
AGTGATTGCTCATGTTGCTG+AGG - chr8.3:38010960-38010979 MS.gene038583:CDS 45.0%
ATGAGAAGAGGGAAGTTCCA+TGG + chr8.3:38011538-38011557 None:intergenic 45.0%
ATTGTCCAAGATTCAGGCAC+TGG + chr8.3:38012099-38012118 None:intergenic 45.0%
CAACATTGGATCCAAGGACA+GGG - chr8.3:38010935-38010954 MS.gene038583:CDS 45.0%
CAGACATTGCACGAACCAAT+TGG - chr8.3:38011493-38011512 MS.gene038583:intron 45.0%
CGCCTAATTCGTTACTATGC+TGG - chr8.3:38011327-38011346 MS.gene038583:intron 45.0%
CTACAGCACGTTTCAAAGCA+CGG + chr8.3:38012470-38012489 None:intergenic 45.0%
CTCATGTTTGCTTGGAAGGT+TGG - chr8.3:38011553-38011572 MS.gene038583:CDS 45.0%
CTCTTTGAATCACCTCACCA+AGG + chr8.3:38013379-38013398 None:intergenic 45.0%
GAAACTGGAGGAGAAAGACT+TGG - chr8.3:38012843-38012862 MS.gene038583:intron 45.0%
GAATCTTATCTGCCCAACCT+GGG + chr8.3:38011435-38011454 None:intergenic 45.0%
GCACTTGAGACTTGGGATAA+TGG - chr8.3:38011258-38011277 MS.gene038583:intron 45.0%
GGTTGGGCAGATAAGATTCA+TGG - chr8.3:38011436-38011455 MS.gene038583:intron 45.0%
GTAGGAGATCCATTCAAGTC+AGG - chr8.3:38012486-38012505 MS.gene038583:intron 45.0%
GTGATTGCTCATGTTGCTGA+GGG - chr8.3:38010961-38010980 MS.gene038583:CDS 45.0%
TAAGCTGGAAACTTAGGCCA+CGG + chr8.3:38011045-38011064 None:intergenic 45.0%
TACAGCACGTTTCAAAGCAC+GGG + chr8.3:38012469-38012488 None:intergenic 45.0%
TCAGGTGGGAATGGTTATCT+GGG - chr8.3:38010652-38010671 MS.gene038583:intron 45.0%
TCCCTCTTCTCATGTTTGCT+TGG - chr8.3:38011545-38011564 MS.gene038583:CDS 45.0%
TGAATCTTATCTGCCCAACC+TGG + chr8.3:38011436-38011455 None:intergenic 45.0%
TGTACATGAACGTGTGCATG+AGG - chr8.3:38012422-38012441 MS.gene038583:CDS 45.0%
TTCAGGTGGGAATGGTTATC+TGG - chr8.3:38010651-38010670 MS.gene038583:intron 45.0%
TTGCTGGTCAGATCATTCCA+TGG - chr8.3:38011518-38011537 MS.gene038583:CDS 45.0%
! AGGAGAAAGACTTGGTAGCA+AGG - chr8.3:38012851-38012870 MS.gene038583:intron 45.0%
! CACCTTTGAAGAATCCAGCA+TGG - chr8.3:38013618-38013637 MS.gene038583:CDS 45.0%
! GATGCTGCAATTCCTTTTGG+TGG - chr8.3:38013518-38013537 MS.gene038583:intron 45.0%
! GCACGCAAAGCATTTGATCA+AGG - chr8.3:38011018-38011037 MS.gene038583:intron 45.0%
! GGAGAAAGACTTGGTAGCAA+GGG - chr8.3:38012852-38012871 MS.gene038583:intron 45.0%
! GTTGATTGATTCAGGGACCT+TGG - chr8.3:38013359-38013378 MS.gene038583:intron 45.0%
! TCAAAGTATGGTCTTGCAGC+AGG - chr8.3:38013407-38013426 MS.gene038583:intron 45.0%
!! TGCTTTTAGCTGCCAGTTGA+AGG + chr8.3:38012169-38012188 None:intergenic 45.0%
!! AAAAAAAGAAAATAAAAATA+GGG + chr8.3:38013313-38013332 None:intergenic 5.0%
!! TAAAAAAAGAAAATAAAAAT+AGG + chr8.3:38013314-38013333 None:intergenic 5.0%
AAGCATTTGATCAAGGGCCG+TGG - chr8.3:38011025-38011044 MS.gene038583:intron 50.0%
ACCACGAGAAAACAAGGAGG+TGG + chr8.3:38009807-38009826 None:intergenic 50.0%
AGGAACAGAACAAGGTCCTC+AGG - chr8.3:38012506-38012525 MS.gene038583:intron 50.0%
AGTGGACAGGGCAGAGAAAA+AGG - chr8.3:38013551-38013570 MS.gene038583:intron 50.0%
ATCTGACCAGCAACGCCAAT+TGG + chr8.3:38011511-38011530 None:intergenic 50.0%
CACACTCAGCTCCTAATCGA+TGG - chr8.3:38010748-38010767 MS.gene038583:intron 50.0%
CCAACATTGGATCCAAGGAC+AGG - chr8.3:38010934-38010953 MS.gene038583:CDS 50.0%
CCACCAAGCTCCAAAGTTAC+CGG + chr8.3:38012200-38012219 None:intergenic 50.0%
CCTGTCCTTGGATCCAATGT+TGG + chr8.3:38010937-38010956 None:intergenic 50.0%
CGAATTAGGCGAACCAGCAT+TGG + chr8.3:38011318-38011337 None:intergenic 50.0%
CGTTACTATGCTGGTACGTG+CGG - chr8.3:38011336-38011355 MS.gene038583:intron 50.0%
TGCTGCTCTTGCTAGTCACA+TGG - chr8.3:38011845-38011864 MS.gene038583:CDS 50.0%
TTGATTCAGGGACCTTGGTG+AGG - chr8.3:38013364-38013383 MS.gene038583:intron 50.0%
TTGCAATCTGCATGCCATCC+TGG + chr8.3:38013016-38013035 None:intergenic 50.0%
TTGGAAGGTTGGACCTGCAT+TGG - chr8.3:38011564-38011583 MS.gene038583:CDS 50.0%
! CATCGATTAGGAGCTGAGTG+TGG + chr8.3:38010750-38010769 None:intergenic 50.0%
!! AAGCCGGTAACTTTGGAGCT+TGG - chr8.3:38012194-38012213 MS.gene038583:intron 50.0%
!! CGGTAACTTTGGAGCTTGGT+GGG - chr8.3:38012198-38012217 MS.gene038583:intron 50.0%
!! CGTGCTTTGAAACGTGCTGT+AGG - chr8.3:38012468-38012487 MS.gene038583:intron 50.0%
!!! TCCACCTCCTTGTTTTCTCG+TGG - chr8.3:38009803-38009822 MS.gene038583:CDS 50.0%
AGGGACAATGTTGCTGTGCC+GGG - chr8.3:38012388-38012407 MS.gene038583:CDS 55.0%
CACGAACCAATTGGCGTTGC+TGG - chr8.3:38011502-38011521 MS.gene038583:intron 55.0%
CAGGGACAATGTTGCTGTGC+CGG - chr8.3:38012387-38012406 MS.gene038583:CDS 55.0%
CCTGTCCAGTGCCTGAATCT+TGG - chr8.3:38012091-38012110 MS.gene038583:CDS 55.0%
GCAATCACTTCCCCTGTCCT+TGG + chr8.3:38010949-38010968 None:intergenic 55.0%
GGCGCTACACTTGAAACTGG+AGG - chr8.3:38012831-38012850 MS.gene038583:intron 55.0%
GGTGGGAATGGTTATCTGGG+TGG - chr8.3:38010655-38010674 MS.gene038583:intron 55.0%
TGCTTTGCGTGCAGCTGCAA+CGG + chr8.3:38011010-38011029 None:intergenic 55.0%
TTGTAGGCTGGACTTCCTCC+TGG - chr8.3:38011783-38011802 MS.gene038583:CDS 55.0%
!! CCAAGATTCAGGCACTGGAC+AGG + chr8.3:38012094-38012113 None:intergenic 55.0%
!! CCGGTAACTTTGGAGCTTGG+TGG - chr8.3:38012197-38012216 MS.gene038583:intron 55.0%
!! TCTGGCTTTGGTCCAACTGC+AGG - chr8.3:38011822-38011841 MS.gene038583:CDS 55.0%
CTATGCTGGTACGTGCGGTG+TGG - chr8.3:38011341-38011360 MS.gene038583:intron 60.0%
GCAAGAGCAGCACCTGCAGT+TGG + chr8.3:38011837-38011856 None:intergenic 60.0%
GGGCTCACAGTTCCAGCTGA+TGG - chr8.3:38011457-38011476 MS.gene038583:intron 60.0%
GTGTTGCCACACGCCAATGC+AGG + chr8.3:38011580-38011599 None:intergenic 60.0%
! GTTGGACCTGCATTGGCGTG+TGG - chr8.3:38011571-38011590 MS.gene038583:CDS 60.0%
!! GTGTGGTCGACTTGCACCGA+TGG + chr8.3:38010733-38010752 None:intergenic 60.0%
GCTGGTACGTGCGGTGTGGA+AGG - chr8.3:38011345-38011364 MS.gene038583:intron 65.0%
GGTACGTGCGGTGTGGAAGG+TGG - chr8.3:38011348-38011367 MS.gene038583:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 38009743 38013646 38009743 ID=MS.gene038583
chr8.3 mRNA 38009743 38013646 38009743 ID=MS.gene038583.t1;Parent=MS.gene038583
chr8.3 exon 38013565 38013646 38013565 ID=MS.gene038583.t1.exon1;Parent=MS.gene038583.t1
chr8.3 CDS 38013565 38013646 38013565 ID=cds.MS.gene038583.t1;Parent=MS.gene038583.t1
chr8.3 exon 38012596 38012733 38012596 ID=MS.gene038583.t1.exon2;Parent=MS.gene038583.t1
chr8.3 CDS 38012596 38012733 38012596 ID=cds.MS.gene038583.t1;Parent=MS.gene038583.t1
chr8.3 exon 38012324 38012466 38012324 ID=MS.gene038583.t1.exon3;Parent=MS.gene038583.t1
chr8.3 CDS 38012324 38012466 38012324 ID=cds.MS.gene038583.t1;Parent=MS.gene038583.t1
chr8.3 exon 38012041 38012194 38012041 ID=MS.gene038583.t1.exon4;Parent=MS.gene038583.t1
chr8.3 CDS 38012041 38012194 38012041 ID=cds.MS.gene038583.t1;Parent=MS.gene038583.t1
chr8.3 exon 38011723 38011952 38011723 ID=MS.gene038583.t1.exon5;Parent=MS.gene038583.t1
chr8.3 CDS 38011723 38011952 38011723 ID=cds.MS.gene038583.t1;Parent=MS.gene038583.t1
chr8.3 exon 38011511 38011600 38011511 ID=MS.gene038583.t1.exon6;Parent=MS.gene038583.t1
chr8.3 CDS 38011511 38011600 38011511 ID=cds.MS.gene038583.t1;Parent=MS.gene038583.t1
chr8.3 exon 38011088 38011261 38011088 ID=MS.gene038583.t1.exon7;Parent=MS.gene038583.t1
chr8.3 CDS 38011088 38011261 38011088 ID=cds.MS.gene038583.t1;Parent=MS.gene038583.t1
chr8.3 exon 38010862 38010999 38010862 ID=MS.gene038583.t1.exon8;Parent=MS.gene038583.t1
chr8.3 CDS 38010862 38010999 38010862 ID=cds.MS.gene038583.t1;Parent=MS.gene038583.t1
chr8.3 exon 38010478 38010615 38010478 ID=MS.gene038583.t1.exon9;Parent=MS.gene038583.t1
chr8.3 CDS 38010478 38010615 38010478 ID=cds.MS.gene038583.t1;Parent=MS.gene038583.t1
chr8.3 exon 38010311 38010372 38010311 ID=MS.gene038583.t1.exon10;Parent=MS.gene038583.t1
chr8.3 CDS 38010311 38010372 38010311 ID=cds.MS.gene038583.t1;Parent=MS.gene038583.t1
chr8.3 exon 38009743 38010016 38009743 ID=MS.gene038583.t1.exon11;Parent=MS.gene038583.t1
chr8.3 CDS 38009743 38010016 38009743 ID=cds.MS.gene038583.t1;Parent=MS.gene038583.t1
Gene Sequence

>MS.gene038583

ATGGCTTCTTCAATCAAAATCTCAAGGCTTATTTCTCGATCATTTTCTTCTGCTTCTTCTTCCACCTCCTTGTTTTCTCGTGGTAAATTATATCTTTACTTAATCACATATTTTATGATTATTTTCATATATCATCAAACATAATTATTCTTTCAAAAAAAAAAAATCAAACATAATTATGTGACTTTTGTTTGTGTTTTTTAGTTTTTTCTTTTAAATTTGTCTTTTTTAAGAAAATGATTTTCTGGGGTTGTTTTGAATTTGATTGATGATAGGATCACAGTCAATGTTTTGAATTTTGAGAAAAATAAGATAAGATAAGATAAGATTTTGGAAATTTTGTCGTTGTAATCTGTGTGACATGAAAGAAAGGTTTCTTTTTCTTTCATTAATTGCATGGTTGGTACTACTTTTGTGGTCTCGTTTTCATAACTGTACTTTTTGATTCTCTCACTTCACTTATAGTTATCTGATACTACTTTTTTTTTTTTTAATAAGAGTGCTACTACTTTTTTGGCTATAGTAATATGAAAATTGGTTTGTACATGTTTAGATTGATGGTCTATTTGGCAGAATCACGGTGTGCCACCTTGAAATGCATGTTTAAATTAACGGTGAGATGAATGTAATCACGGTGGCATCGTGATTTTGACAAATTGACACTAGATCCAAAGATGGACTTAACAAAAATAAGAGTGACACTGTGATTTCGTCAATCTCATTGTGATACTGAATATTTCCTGCCAAAAACTCATGTTTGTGTTGGTTGGAGATGATGTGATCCTGATTTCAATTGATGATTAAAAGGGGTGTTTCAGTTTATGATTTTCATTAGGGGTTTAGGTTTTTTAAAGGCATTGATTGATGCTCAATGATAAATTGAATATTGAAAGGAAAAAAAATGTACTTTCAGGTGGGAATGGTTATCTGGGTGGATTACTCTCTAAATACAGCACTGCTGCTGCCATTGATGAAAAACCGATTAAACCATCGGTGCAAGTCGACCACACTCAGCTCCTAATCGATGGCAAATTTGTAGATGCTGCTGCTGGTGAGTGTTTTTTTTATTTTATTTTATTCTTTTTATACAATTTTGATTAGGAAAGAAAAGAGGATTAACTAAAGGAAAAGAAGGGTTGTTTTTGTGGTATCTTACCTTTTGGAGTTTGTCTGTGATCAGGTAAAACATTTCCAACATTGGATCCAAGGACAGGGGAAGTGATTGCTCATGTTGCTGAGGGTCACTCTGAAGATGTTGATAGAGCCGTTGCAGCTGCACGCAAAGCATTTGATCAAGGGCCGTGGCCTAAGTTTCCAGCTTATGTATGATCATTGCTTCTTCGTTTTTCTGTTTGTGATTTTTCTATTGTTTGTCAAGTCATTATATTTGGTTCAACTTCAATGAATTTGCAGTTGAGTCCACTTTTGTTTTTCTGTTTATGTGTTTTATAGGAAAGGCAAAAGATAATGTTGCGTGCTGCTGATTTGATTGAAAAGCATAACGATGAAATTGCAGCACTTGAGACTTGGGATAATGGGAAACCATATGAACAATCTGCTCAGATTGAAATTCCAATGCTGGTTCGCCTAATTCGTTACTATGCTGGTACGTGCGGTGTGGAAGGTGGTACTATCAGTTCTTCTCTTTGTTTTGTAAAACTACACTCACACTTGTATTTTCATATTTACCCCAGGTTGGGCAGATAAGATTCATGGGCTCACAGTTCCAGCTGATGGACCATATCATGTGCAGACATTGCACGAACCAATTGGCGTTGCTGGTCAGATCATTCCATGGAACTTCCCTCTTCTCATGTTTGCTTGGAAGGTTGGACCTGCATTGGCGTGTGGCAACACAGTCGTTCTAAAAACAGCTGAACAGACACCATTGTCTGCTTTGTATGTAGCAAAACTATTTCACGAGGTTTGATACATTCACCAATCTTGTTTTAATTTTTATAAATCAATATAAAAGCATTGTTTTTGGTGGAGTTTATTTTAACCATAAAATATATCATCTTTGCTAATTTGTAATCTTTCTTGTAGGCTGGACTTCCTCCTGGTGTTTTGAACATAATATCTGGCTTTGGTCCAACTGCAGGTGCTGCTCTTGCTAGTCACATGGATGTTGATAAGGTACTAAAATATTAAGTTCTGCACTTGTGTTTTAATGTAATTATAAGTTGCTAGTATATTCAAACTGACTTCACTCCATGTACCGACATTTTAGATTGAAGGCATGTCTAGTGTCTGACATGTGTTAGTGTCTGACACTTACACGACACTGACATATATGATTACATTTAATCACTTCTATTTCTTATATTATTACTAGTCTCTATGTATCGCCTGTCCAGTGCCTGAATCTTGGACAATCTTTTGCAGCTTGCATTTACTGGTTCAACTGATACTGGAAAAGTTGTCCTTCAACTGGCAGCTAAAAGCAATCTTAAGCCGGTAACTTTGGAGCTTGGTGGGAAATCTCCGTTTATTGTTTGCGACGATGCTGATATAGATGAAGCTGTTGAGCTAGCACACTTTGCCTTATTCTTCAACCAGGTATGTTCAATCATAAAGTTCTTGTTATTAAACAATTGTCTCTCGTATAAATCAAATAGCACTGATTGGTGTTCTTTCTGACATTCAGGGACAATGTTGCTGTGCCGGGTCTCGAACATTTGTACATGAACGTGTGCATGAGGAGTTTGTTGAGAAAGCAAAGGCCCGTGCTTTGAAACGTGCTGTAGGAGATCCATTCAAGTCAGGAACAGAACAAGGTCCTCAGGTAAATTACAACGAATAATTTGAGCGACATCTTCATGATTAATCTTAGAGCTTGGTTTTCCTAATTCTCTACGGTCATTGTGATGTTCAGATACTAGAGGCTTCACAAAATTGAAATGCATAGAAGAAATCAAGAATATACTACATTGCTACTACTTTGATATTCTCTTGTTAAACCTTAATGTTTGTGACTCTTTTGAAATGTCTGAATATATACTGAAATATTTCTTATGATCCAAACAATCAGATTGATTCAAAGCAATTTGAGAAAATATTGAAGTATATTAGATCTGGCGTTGATAATGGCGCTACACTTGAAACTGGAGGAGAAAGACTTGGTAGCAAGGGCTACTATATTCAGCCTACTGTCTTCTCAAATGTTCAGGTGTGTGTGTGCGTGCGCGCGTTCACGCTTATATTCTCATCTTTGCAAAGGATTATGAAAATACAATTCCTAATGTTTTTAATTGTATCTGTAACAATCATCCAGGATGGCATGCAGATTGCAAAAGAAGAGATATTTGGTCCAGTACAAACCATATTGAAATTCAAGTGAGACCAATGAGTCTTGATTTGTAGAGAATGTTATTTTCTAGTTTCAAATATATTTTTAGTCCCTTTAATGCACCCTTCATCAAATGTAGTCTATATAAAAATTTCAGTGTTGTTTAGCTCCCAATTTGACGATTTTTGCGAAAGTTGAAATCACCAGATTGAGAACAAAGCATCACTAGAAAATTTTATAAGAGGTGTATTTTACAAGGACTAAAGACATATATTGAACCCTATTTTTATTTTCTTTTTTTATATGTGAAATGCAATTAATTTTAATGTTGATTGATTCAGGGACCTTGGTGAGGTGATTCAAAGAGCAAACAATTCAAAGTATGGTCTTGCAGCAGGAGTTTTCACAAAGAACATAGACACTGCAAATACTTTGACTAGAGCATTGAAAGTTGGAACAGTTTGGGTAAATTGCTTTGATACATTTGATGCTGCAATTCCTTTTGGTGGATATAAGATGAGTGGACAGGGCAGAGAAAAAGGAGAATACAGTCTTAAAAACTACTTGCAAGTGAAGGCTGTTGTTACACCTTTGAAGAATCCAGCATGGCTTTGA
Protein sequence

>MS.gene038583.t1

MASSIKISRLISRSFSSASSSTSLFSRGGNGYLGGLLSKYSTAAAIDEKPIKPSVQVDHTQLLIDGKFVDAAAGKTFPTLDPRTGEVIAHVAEGHSEDVDRAVAAARKAFDQGPWPKFPAYERQKIMLRAADLIEKHNDEIAALETWDNGKPYEQSAQIEIPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPLSALYVAKLFHEAGLPPGVLNIISGFGPTAGAALASHMDVDKLAFTGSTDTGKVVLQLAAKSNLKPVTLELGGKSPFIVCDDADIDEAVELAHFALFFNQGQCCCAGSRTFVHERVHEEFVEKAKARALKRAVGDPFKSGTEQGPQIDSKQFEKILKYIRSGVDNGATLETGGERLGSKGYYIQPTVFSNVQDGMQIAKEEIFGPVQTILKFKDLGEVIQRANNSKYGLAAGVFTKNIDTANTLTRALKVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL