Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068128.t1 | KEH20152.1 | 71.3 | 265 | 62 | 4 | 1 | 261 | 1 | 255 | 1.20E-62 | 250 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068128.t1 | G7LJC7 | 71.3 | 265 | 62 | 4 | 1 | 261 | 1 | 255 | 8.8e-63 | 250.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene068128 | 0.816602 | 5.08E-52 | -1.69E-46 |
| MS.gene049151 | MS.gene068128 | 0.815319 | 9.82E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene068128 | 0.82193 | 3.11E-53 | -1.69E-46 |
| MS.gene049230 | MS.gene068128 | 0.805923 | 1.06E-49 | -1.69E-46 |
| MS.gene050168 | MS.gene068128 | 0.808921 | 2.44E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene068128 | 0.826235 | 3.03E-54 | -1.69E-46 |
| MS.gene050680 | MS.gene068128 | 0.807087 | 6.00E-50 | -1.69E-46 |
| MS.gene051373 | MS.gene068128 | 0.815663 | 8.24E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene068128 | 0.85624 | 3.68E-62 | -1.69E-46 |
| MS.gene052077 | MS.gene068128 | 0.810132 | 1.34E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene068128 | 0.801989 | 6.94E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene068128 | 0.807387 | 5.18E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene068128 | 0.817 | 4.14E-52 | -1.69E-46 |
| MS.gene052426 | MS.gene068128 | 0.804328 | 2.28E-49 | -1.69E-46 |
| MS.gene053494 | MS.gene068128 | 0.830066 | 3.62E-55 | -1.69E-46 |
| MS.gene053557 | MS.gene068128 | 0.801884 | 7.29E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene068128 | 0.80942 | 1.91E-50 | -1.69E-46 |
| MS.gene054349 | MS.gene068128 | 0.828859 | 7.11E-55 | -1.69E-46 |
| MS.gene054930 | MS.gene068128 | 0.825116 | 5.59E-54 | -1.69E-46 |
| MS.gene055367 | MS.gene068128 | 0.809356 | 1.97E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene068128 | 0.830533 | 2.78E-55 | -1.69E-46 |
| MS.gene055701 | MS.gene068128 | 0.800508 | 1.39E-48 | -1.69E-46 |
| MS.gene056659 | MS.gene068128 | 0.819106 | 1.38E-52 | -1.69E-46 |
| MS.gene056723 | MS.gene068128 | 0.838553 | 2.69E-57 | -1.69E-46 |
| MS.gene056979 | MS.gene068128 | 0.83985 | 1.24E-57 | -1.69E-46 |
| MS.gene057396 | MS.gene068128 | 0.838787 | 2.34E-57 | -1.69E-46 |
| MS.gene058002 | MS.gene068128 | 0.824548 | 7.60E-54 | -1.69E-46 |
| MS.gene058142 | MS.gene068128 | 0.860476 | 2.01E-63 | -1.69E-46 |
| MS.gene058749 | MS.gene068128 | 0.815152 | 1.07E-51 | -1.69E-46 |
| MS.gene058949 | MS.gene068128 | 0.817449 | 3.28E-52 | -1.69E-46 |
| MS.gene059247 | MS.gene068128 | 0.800919 | 1.15E-48 | -1.69E-46 |
| MS.gene059285 | MS.gene068128 | 0.819764 | 9.78E-53 | -1.69E-46 |
| MS.gene059788 | MS.gene068128 | 0.804336 | 2.27E-49 | -1.69E-46 |
| MS.gene059899 | MS.gene068128 | 0.834593 | 2.74E-56 | -1.69E-46 |
| MS.gene060083 | MS.gene068128 | 0.812207 | 4.76E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene068128 | 0.818544 | 1.86E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068128.t1 | MTR_8g069450 | 73.585 | 265 | 56 | 4 | 1 | 261 | 1 | 255 | 6.43e-125 | 355 |
| MS.gene068128.t1 | MTR_8g069450 | 73.585 | 265 | 56 | 4 | 1 | 261 | 1 | 255 | 1.04e-124 | 355 |
| MS.gene068128.t1 | MTR_8g069450 | 73.585 | 265 | 56 | 4 | 1 | 261 | 1 | 255 | 1.04e-122 | 352 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068128.t1 | AT3G26580 | 72.989 | 174 | 40 | 2 | 91 | 261 | 112 | 281 | 8.96e-86 | 259 |
Find 75 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAAGCTGAAGAGTATT+TGG | 0.185288 | 8.1:-35772892 | MS.gene068128:CDS |
| ATACCAAGATCTACATTATT+TGG | 0.191918 | 8.1:-35771484 | MS.gene068128:CDS |
| GCAATCCTTATGGCGATTAT+TGG | 0.215703 | 8.1:+35771299 | None:intergenic |
| TGCAGAACTTCGTTACATTT+TGG | 0.260230 | 8.1:-35771217 | MS.gene068128:CDS |
| GTGATGAGGGAAGGAGGGTT+AGG | 0.266677 | 8.1:-35772984 | MS.gene068128:CDS |
| GATTTGGGTAAGAAAGCTTA+TGG | 0.281355 | 8.1:-35771559 | MS.gene068128:CDS |
| GTGAATTTCAGATACAAATA+TGG | 0.289294 | 8.1:-35771341 | MS.gene068128:intron |
| AGCTCAGTTGATGTATGATT+TGG | 0.292561 | 8.1:-35771575 | MS.gene068128:CDS |
| TGATGAGGGAAGGAGGGTTA+GGG | 0.326506 | 8.1:-35772983 | MS.gene068128:CDS |
| AAGAGAAGAGGATGAGAGTT+AGG | 0.351749 | 8.1:-35772833 | MS.gene068128:CDS |
| GTATAGTCACCATCTCTTCT+TGG | 0.352541 | 8.1:+35771172 | None:intergenic |
| TCTTGGGTTATCTTGAGCTT+TGG | 0.386466 | 8.1:+35771189 | None:intergenic |
| GAGAAGAGTGAAGGAGTTTG+AGG | 0.386700 | 8.1:-35772931 | MS.gene068128:CDS |
| TATAGTCACCATCTCTTCTT+GGG | 0.408773 | 8.1:+35771173 | None:intergenic |
| TGAAGATATGTCGAGGAGTA+AGG | 0.409603 | 8.1:+35773195 | None:intergenic |
| CTGTCGAGAGTTAAGCTTCG+TGG | 0.419384 | 8.1:+35773172 | None:intergenic |
| GGAGGCACGTGGACGAGTGG+TGG | 0.426998 | 8.1:-35773061 | MS.gene068128:CDS |
| TGACGTTTGATGCTAATACT+AGG | 0.431805 | 8.1:+35771243 | None:intergenic |
| GCTCAGTTGATGTATGATTT+GGG | 0.432267 | 8.1:-35771574 | MS.gene068128:CDS |
| AAAGAGCAATGCAATCCTTA+TGG | 0.434951 | 8.1:+35771289 | None:intergenic |
| CCACCAAATAATGTAGATCT+TGG | 0.439479 | 8.1:+35771481 | None:intergenic |
| AGTTAGGAAAGAGCTTGAAA+AGG | 0.442833 | 8.1:-35772817 | MS.gene068128:intron |
| ATTTGGGTAAGAAAGCTTAT+GGG | 0.445943 | 8.1:-35771558 | MS.gene068128:CDS |
| TCCACCATGGCTGTAAGCTT+AGG | 0.453178 | 8.1:-35773227 | None:intergenic |
| ATGGCTGGCTATGGCTTATG+AGG | 0.453962 | 8.1:-35771322 | MS.gene068128:CDS |
| GGACGAGTGGTGGTGGCTCG+TGG | 0.454291 | 8.1:-35773051 | MS.gene068128:CDS |
| TGAAGAGTATTTGGAGAGTG+AGG | 0.460039 | 8.1:-35772883 | MS.gene068128:CDS |
| AGGGAAGGAGGGTTAGGGGA+TGG | 0.462443 | 8.1:-35772978 | MS.gene068128:CDS |
| GTCATAACTAGAACCAATCA+AGG | 0.468929 | 8.1:+35771149 | None:intergenic |
| ATGGTGACTATACCCTTGAT+TGG | 0.471938 | 8.1:-35771162 | MS.gene068128:CDS |
| GGCACGTGGACGAGTGGTGG+TGG | 0.473510 | 8.1:-35773058 | MS.gene068128:CDS |
| GATGAGGGAAGGAGGGTTAG+GGG | 0.476513 | 8.1:-35772982 | MS.gene068128:CDS |
| TATGTCGAGGAGTAAGGGTT+AGG | 0.479895 | 8.1:+35773201 | None:intergenic |
| CGTGCCGTTGAGTTTCTTGA+AGG | 0.493680 | 8.1:-35771520 | MS.gene068128:CDS |
| GACGTTTGATGCTAATACTA+GGG | 0.495643 | 8.1:+35771244 | None:intergenic |
| ATCTACATTATTTGGTGGTG+AGG | 0.501114 | 8.1:-35771476 | MS.gene068128:intron |
| TGATTGGTTCTAGTTATGAC+AGG | 0.513314 | 8.1:-35771146 | None:intergenic |
| TTGGAGAGTGAGGGTGATGA+TGG | 0.525809 | 8.1:-35772873 | MS.gene068128:CDS |
| GAATCAGGTGGCTAAGGAGC+AGG | 0.526095 | 8.1:-35771614 | MS.gene068128:intron |
| CCAAGATCTACATTATTTGG+TGG | 0.527272 | 8.1:-35771481 | MS.gene068128:CDS |
| GGCTCGTGGGAAGTCGAACT+CGG | 0.533847 | 8.1:-35773037 | MS.gene068128:CDS |
| AAGAGAGTGAGGAAGAGAAG+AGG | 0.534892 | 8.1:-35772845 | MS.gene068128:CDS |
| GCTTATGGGAGAGGCACGTA+TGG | 0.534948 | 8.1:-35771544 | MS.gene068128:CDS |
| CGGAGAGTGATGAGGGAAGG+AGG | 0.536581 | 8.1:-35772990 | MS.gene068128:CDS |
| TAAGGAGCAGGCAGAGAGGA+GGG | 0.539752 | 8.1:-35771602 | MS.gene068128:CDS |
| GGTAAGAAAGCTTATGGGAG+AGG | 0.539832 | 8.1:-35771553 | MS.gene068128:CDS |
| GAAGATATGTCGAGGAGTAA+GGG | 0.542086 | 8.1:+35773196 | None:intergenic |
| TGAGGCCAATAATCGCCATA+AGG | 0.547038 | 8.1:-35771304 | MS.gene068128:CDS |
| GACGAGTGGTGGTGGCTCGT+GGG | 0.547546 | 8.1:-35773050 | MS.gene068128:CDS |
| GTTTCCTAAGCTTACAGCCA+TGG | 0.550071 | 8.1:+35773223 | None:intergenic |
| TAATGTAGATCTTGGTATGA+TGG | 0.552370 | 8.1:+35771489 | None:intergenic |
| ATTTCAGATACAAATATGGC+TGG | 0.553752 | 8.1:-35771337 | MS.gene068128:intron |
| GAAGATAAGGAGAAGAGTGA+AGG | 0.556556 | 8.1:-35772940 | MS.gene068128:CDS |
| GAAGAGTATTTGGAGAGTGA+GGG | 0.558339 | 8.1:-35772882 | MS.gene068128:CDS |
| TGATGGTGAGGAAGAGAGTG+AGG | 0.565673 | 8.1:-35772856 | MS.gene068128:CDS |
| GATACAAATATGGCTGGCTA+TGG | 0.569208 | 8.1:-35771331 | MS.gene068128:CDS |
| GATGAAGAGTCTCTCTTGAG+AGG | 0.573372 | 8.1:+35773129 | None:intergenic |
| AAGTCGAACTCGGAGCAGAA+TGG | 0.574039 | 8.1:-35773027 | MS.gene068128:CDS |
| GAGTGAAGGAGTTTGAGGAG+AGG | 0.575962 | 8.1:-35772926 | MS.gene068128:CDS |
| CAAGATAACCCAAGAAGAGA+TGG | 0.579385 | 8.1:-35771181 | MS.gene068128:CDS |
| CTAAGGAGCAGGCAGAGAGG+AGG | 0.584864 | 8.1:-35771603 | MS.gene068128:CDS |
| TTTGACTCGGAGAGTGATGA+GGG | 0.587695 | 8.1:-35772997 | MS.gene068128:CDS |
| CTTTGACTCGGAGAGTGATG+AGG | 0.590649 | 8.1:-35772998 | MS.gene068128:CDS |
| TTTGACGAATCAGGTGGCTA+AGG | 0.599329 | 8.1:-35771620 | MS.gene068128:intron |
| TTGAGAGGTAACGTGAGAAG+AGG | 0.599921 | 8.1:+35773144 | None:intergenic |
| GAGTGAGGGTGATGATGGTG+AGG | 0.613856 | 8.1:-35772868 | MS.gene068128:CDS |
| ACTCGGAGAGTGATGAGGGA+AGG | 0.620955 | 8.1:-35772993 | MS.gene068128:CDS |
| GAATGGAGTGGACTTTGACT+CGG | 0.628890 | 8.1:-35773010 | MS.gene068128:CDS |
| GGAGAGTGATGAGGGAAGGA+GGG | 0.633748 | 8.1:-35772989 | MS.gene068128:CDS |
| TGCACCTTCAAGAAACTCAA+CGG | 0.650398 | 8.1:+35771516 | None:intergenic |
| ATCATACATCAACTGAGCTG+TGG | 0.650968 | 8.1:+35771579 | None:intergenic |
| TCATAACTAGAACCAATCAA+GGG | 0.666833 | 8.1:+35771150 | None:intergenic |
| GAACTCGGAGCAGAATGGAG+TGG | 0.672823 | 8.1:-35773022 | MS.gene068128:CDS |
| TGGCTAAGGAGCAGGCAGAG+AGG | 0.675876 | 8.1:-35771606 | MS.gene068128:CDS |
| TTCGTGGTGAAGATATGTCG+AGG | 0.678789 | 8.1:+35773188 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGCAATTTTTTATTTTTT+AGG | - | chr8.1:35772062-35772081 | MS.gene068128:intron | 10.0% |
| !!! | AATTTTGTAGTTTTTGTTTT+TGG | - | chr8.1:35771701-35771720 | MS.gene068128:intron | 15.0% |
| !! | CATATACATCATTTATTCAA+CGG | - | chr8.1:35772124-35772143 | MS.gene068128:intron | 20.0% |
| !! | GATGTATATGATCTATATTA+TGG | + | chr8.1:35772114-35772133 | None:intergenic | 20.0% |
| !! | TAAACAGTAGTTTAGTATTT+AGG | + | chr8.1:35771732-35771751 | None:intergenic | 20.0% |
| !! | TTGCTTACAAATATTTGTTT+AGG | + | chr8.1:35772641-35772660 | None:intergenic | 20.0% |
| !!! | AAGATGGATTGTAATATATA+TGG | - | chr8.1:35772432-35772451 | MS.gene068128:intron | 20.0% |
| !!! | AATAACTATTCTTGGTTTTT+TGG | - | chr8.1:35772460-35772479 | MS.gene068128:intron | 20.0% |
| !!! | GATTCTTATTTAGTTAAGAA+TGG | + | chr8.1:35772923-35772942 | None:intergenic | 20.0% |
| !!! | TCAATACATATTGTTTTCAT+AGG | - | chr8.1:35772612-35772631 | MS.gene068128:intron | 20.0% |
| !!! | TTTTTGACTAATTTGTTGAT+TGG | - | chr8.1:35772221-35772240 | MS.gene068128:intron | 20.0% |
| ! | AACAAGGGATAATTTCTTAA+AGG | - | chr8.1:35771751-35771770 | MS.gene068128:intron | 25.0% |
| ! | ACAGTTATGAGAAAATCATT+TGG | + | chr8.1:35771811-35771830 | None:intergenic | 25.0% |
| ! | ACTAAACTACTGTTTAACAA+GGG | - | chr8.1:35771736-35771755 | MS.gene068128:intron | 25.0% |
| ! | ATACCAAGATCTACATTATT+TGG | - | chr8.1:35772884-35772903 | MS.gene068128:CDS | 25.0% |
| ! | CAGTTATGAGAAAATCATTT+GGG | + | chr8.1:35771810-35771829 | None:intergenic | 25.0% |
| ! | CATTGAATAAATGATGTATG+TGG | - | chr8.1:35772087-35772106 | MS.gene068128:intron | 25.0% |
| ! | GTGAATTTCAGATACAAATA+TGG | - | chr8.1:35773027-35773046 | MS.gene068128:CDS | 25.0% |
| ! | GTGTATGTAAAGAAAACAAA+AGG | + | chr8.1:35772322-35772341 | None:intergenic | 25.0% |
| ! | TACTAAACTACTGTTTAACA+AGG | - | chr8.1:35771735-35771754 | MS.gene068128:intron | 25.0% |
| !!! | ATGATTTTGAAACGAAGATA+AGG | - | chr8.1:35771415-35771434 | MS.gene068128:intron | 25.0% |
| !!! | GTTTTCATACTTTTTGTTTG+AGG | - | chr8.1:35772515-35772534 | MS.gene068128:intron | 25.0% |
| !!! | TGTAGTTTTTGTTTTTGGAA+AGG | - | chr8.1:35771706-35771725 | MS.gene068128:intron | 25.0% |
| AACTATTACATATGAGACAG+AGG | + | chr8.1:35771656-35771675 | None:intergenic | 30.0% | |
| ATTTCAGATACAAATATGGC+TGG | - | chr8.1:35773031-35773050 | MS.gene068128:CDS | 30.0% | |
| ATTTGGGTAAGAAAGCTTAT+GGG | - | chr8.1:35772810-35772829 | MS.gene068128:intron | 30.0% | |
| CTAGAAGTGAAACATTAAGA+TGG | - | chr8.1:35772416-35772435 | MS.gene068128:intron | 30.0% | |
| TAATGTAGATCTTGGTATGA+TGG | + | chr8.1:35772882-35772901 | None:intergenic | 30.0% | |
| TCATAACTAGAACCAATCAA+GGG | + | chr8.1:35773221-35773240 | None:intergenic | 30.0% | |
| TGCTTATAATTGAGACTAGA+GGG | + | chr8.1:35772048-35772067 | None:intergenic | 30.0% | |
| TGGTGCATAATAACTATTCT+TGG | - | chr8.1:35772452-35772471 | MS.gene068128:intron | 30.0% | |
| TGTCAGTTGTCTAATGATAA+AGG | + | chr8.1:35772377-35772396 | None:intergenic | 30.0% | |
| TTGCTTATAATTGAGACTAG+AGG | + | chr8.1:35772049-35772068 | None:intergenic | 30.0% | |
| ! | ATATAACTGCTTTCGGTTTT+GGG | - | chr8.1:35771899-35771918 | MS.gene068128:intron | 30.0% |
| ! | ATCTTTTTGTTGGGACTTAT+GGG | + | chr8.1:35772003-35772022 | None:intergenic | 30.0% |
| ! | TGTTGTAGTTATGCTTTTGA+GGG | - | chr8.1:35771284-35771303 | MS.gene068128:CDS | 30.0% |
| AAAGAGCAATGCAATCCTTA+TGG | + | chr8.1:35773082-35773101 | None:intergenic | 35.0% | |
| ACAAAGTTTCACGATAACAG+TGG | + | chr8.1:35772291-35772310 | None:intergenic | 35.0% | |
| ACTGTTATCGTGAAACTTTG+TGG | - | chr8.1:35772290-35772309 | MS.gene068128:intron | 35.0% | |
| AGTTAGGAAAGAGCTTGAAA+AGG | - | chr8.1:35771551-35771570 | MS.gene068128:CDS | 35.0% | |
| CAAAACCGAAAGCAGTTATA+TGG | + | chr8.1:35771900-35771919 | None:intergenic | 35.0% | |
| CAAAGTTTCACGATAACAGT+GGG | + | chr8.1:35772290-35772309 | None:intergenic | 35.0% | |
| CACAAGTATGTCTAGATACT+AGG | + | chr8.1:35771931-35771950 | None:intergenic | 35.0% | |
| CCAAGATCTACATTATTTGG+TGG | - | chr8.1:35772887-35772906 | MS.gene068128:CDS | 35.0% | |
| CCACCAAATAATGTAGATCT+TGG | + | chr8.1:35772890-35772909 | None:intergenic | 35.0% | |
| GACGTTTGATGCTAATACTA+GGG | + | chr8.1:35773127-35773146 | None:intergenic | 35.0% | |
| GATTTGGGTAAGAAAGCTTA+TGG | - | chr8.1:35772809-35772828 | MS.gene068128:intron | 35.0% | |
| GTCATAACTAGAACCAATCA+AGG | + | chr8.1:35773222-35773241 | None:intergenic | 35.0% | |
| TATAGTCACCATCTCTTCTT+GGG | + | chr8.1:35773198-35773217 | None:intergenic | 35.0% | |
| TGACGTTTGATGCTAATACT+AGG | + | chr8.1:35773128-35773147 | None:intergenic | 35.0% | |
| ! | ACTCTCTCGATCTTTTTGTT+GGG | + | chr8.1:35772012-35772031 | None:intergenic | 35.0% |
| ! | AGCTCAGTTGATGTATGATT+TGG | - | chr8.1:35772793-35772812 | MS.gene068128:intron | 35.0% |
| ! | CATATAACTGCTTTCGGTTT+TGG | - | chr8.1:35771898-35771917 | MS.gene068128:intron | 35.0% |
| ! | CTGTTGTAGTTATGCTTTTG+AGG | - | chr8.1:35771283-35771302 | MS.gene068128:CDS | 35.0% |
| ! | GATCTTTTTGTTGGGACTTA+TGG | + | chr8.1:35772004-35772023 | None:intergenic | 35.0% |
| ! | GCTCAGTTGATGTATGATTT+GGG | - | chr8.1:35772794-35772813 | MS.gene068128:intron | 35.0% |
| ! | GTTGTAGTTATGCTTTTGAG+GGG | - | chr8.1:35771285-35771304 | MS.gene068128:CDS | 35.0% |
| ! | TGATCCTCTCTAGTGTTTTA+AGG | - | chr8.1:35771974-35771993 | MS.gene068128:intron | 35.0% |
| ! | TGCAGAACTTCGTTACATTT+TGG | - | chr8.1:35773151-35773170 | MS.gene068128:CDS | 35.0% |
| !! | ACCATTATTTTTCTCCTCTC+GGG | - | chr8.1:35772680-35772699 | MS.gene068128:intron | 35.0% |
| !! | AGACAGAGGAGTACTAATTA+AGG | + | chr8.1:35771642-35771661 | None:intergenic | 35.0% |
| !! | ATCTACATTATTTGGTGGTG+AGG | - | chr8.1:35772892-35772911 | MS.gene068128:CDS | 35.0% |
| !! | GAAGAAAGCTGAAGAGTATT+TGG | - | chr8.1:35771476-35771495 | MS.gene068128:intron | 35.0% |
| !! | GACCATTATTTTTCTCCTCT+CGG | - | chr8.1:35772679-35772698 | MS.gene068128:intron | 35.0% |
| !! | TTCACTTCTAGTGACTTGTT+AGG | + | chr8.1:35772407-35772426 | None:intergenic | 35.0% |
| !! | TTGTAGTTATGCTTTTGAGG+GGG | - | chr8.1:35771286-35771305 | MS.gene068128:CDS | 35.0% |
| AAGAGAAGAGGATGAGAGTT+AGG | - | chr8.1:35771535-35771554 | MS.gene068128:CDS | 40.0% | |
| ACCCGAGAGGAGAAAAATAA+TGG | + | chr8.1:35772684-35772703 | None:intergenic | 40.0% | |
| ATCATACATCAACTGAGCTG+TGG | + | chr8.1:35772792-35772811 | None:intergenic | 40.0% | |
| ATGGTGACTATACCCTTGAT+TGG | - | chr8.1:35773206-35773225 | MS.gene068128:CDS | 40.0% | |
| CAAGATAACCCAAGAAGAGA+TGG | - | chr8.1:35773187-35773206 | MS.gene068128:CDS | 40.0% | |
| CACTCGTTGACATATGTTTG+TGG | - | chr8.1:35772725-35772744 | MS.gene068128:intron | 40.0% | |
| GAAGATAAGGAGAAGAGTGA+AGG | - | chr8.1:35771428-35771447 | MS.gene068128:intron | 40.0% | |
| GAAGATATGTCGAGGAGTAA+GGG | + | chr8.1:35771175-35771194 | None:intergenic | 40.0% | |
| GAAGCCTTAAAACACTAGAG+AGG | + | chr8.1:35771981-35772000 | None:intergenic | 40.0% | |
| GCAATCCTTATGGCGATTAT+TGG | + | chr8.1:35773072-35773091 | None:intergenic | 40.0% | |
| GTATAGTCACCATCTCTTCT+TGG | + | chr8.1:35773199-35773218 | None:intergenic | 40.0% | |
| GTGGAGGGTGATGATTAAAT+TGG | - | chr8.1:35772702-35772721 | MS.gene068128:intron | 40.0% | |
| TCTTGGGTTATCTTGAGCTT+TGG | + | chr8.1:35773182-35773201 | None:intergenic | 40.0% | |
| TGAAGATATGTCGAGGAGTA+AGG | + | chr8.1:35771176-35771195 | None:intergenic | 40.0% | |
| TGCACCTTCAAGAAACTCAA+CGG | + | chr8.1:35772855-35772874 | None:intergenic | 40.0% | |
| TGTTTGTGGTTTGACGAATC+AGG | - | chr8.1:35772739-35772758 | MS.gene068128:intron | 40.0% | |
| ! | CACTCTCTCGATCTTTTTGT+TGG | + | chr8.1:35772013-35772032 | None:intergenic | 40.0% |
| ! | GATACAAATATGGCTGGCTA+TGG | - | chr8.1:35773037-35773056 | MS.gene068128:CDS | 40.0% |
| !! | ATTATTTTTCTCCTCTCGGG+TGG | - | chr8.1:35772683-35772702 | MS.gene068128:intron | 40.0% |
| !! | GAAGAGTATTTGGAGAGTGA+GGG | - | chr8.1:35771486-35771505 | MS.gene068128:CDS | 40.0% |
| !! | TGAAGAGTATTTGGAGAGTG+AGG | - | chr8.1:35771485-35771504 | MS.gene068128:CDS | 40.0% |
| AAGAGAGTGAGGAAGAGAAG+AGG | - | chr8.1:35771523-35771542 | MS.gene068128:CDS | 45.0% | |
| ACCGAAAGCAGTTATATGGC+AGG | + | chr8.1:35771896-35771915 | None:intergenic | 45.0% | |
| CCAACGAGACATCGCTTAAT+TGG | + | chr8.1:35772344-35772363 | None:intergenic | 45.0% | |
| CCAATTAAGCGATGTCTCGT+TGG | - | chr8.1:35772341-35772360 | MS.gene068128:intron | 45.0% | |
| CCCTGCCATATAACTGCTTT+CGG | - | chr8.1:35771892-35771911 | MS.gene068128:intron | 45.0% | |
| CCGAAAGCAGTTATATGGCA+GGG | + | chr8.1:35771895-35771914 | None:intergenic | 45.0% | |
| GAGAAGAGTGAAGGAGTTTG+AGG | - | chr8.1:35771437-35771456 | MS.gene068128:intron | 45.0% | |
| GATGAAGAGTCTCTCTTGAG+AGG | + | chr8.1:35771242-35771261 | None:intergenic | 45.0% | |
| GGTAAGAAAGCTTATGGGAG+AGG | - | chr8.1:35772815-35772834 | MS.gene068128:intron | 45.0% | |
| TATGTCGAGGAGTAAGGGTT+AGG | + | chr8.1:35771170-35771189 | None:intergenic | 45.0% | |
| TGAGGCCAATAATCGCCATA+AGG | - | chr8.1:35773064-35773083 | MS.gene068128:CDS | 45.0% | |
| TTCGTGGTGAAGATATGTCG+AGG | + | chr8.1:35771183-35771202 | None:intergenic | 45.0% | |
| TTGAGAGGTAACGTGAGAAG+AGG | + | chr8.1:35771227-35771246 | None:intergenic | 45.0% | |
| TTGTGGTTTGACGAATCAGG+TGG | - | chr8.1:35772742-35772761 | MS.gene068128:intron | 45.0% | |
| TTTGACGAATCAGGTGGCTA+AGG | - | chr8.1:35772748-35772767 | MS.gene068128:intron | 45.0% | |
| ! | GAATGGAGTGGACTTTGACT+CGG | - | chr8.1:35771358-35771377 | MS.gene068128:intron | 45.0% |
| !! | TAGTTATGCTTTTGAGGGGG+AGG | - | chr8.1:35771289-35771308 | MS.gene068128:CDS | 45.0% |
| !! | TTTGACTCGGAGAGTGATGA+GGG | - | chr8.1:35771371-35771390 | MS.gene068128:intron | 45.0% |
| AAGTCGAACTCGGAGCAGAA+TGG | - | chr8.1:35771341-35771360 | MS.gene068128:intron | 50.0% | |
| CTGTCGAGAGTTAAGCTTCG+TGG | + | chr8.1:35771199-35771218 | None:intergenic | 50.0% | |
| GAGTGAAGGAGTTTGAGGAG+AGG | - | chr8.1:35771442-35771461 | MS.gene068128:intron | 50.0% | |
| TGATGAGGGAAGGAGGGTTA+GGG | - | chr8.1:35771385-35771404 | MS.gene068128:intron | 50.0% | |
| TTGGAGAGTGAGGGTGATGA+TGG | - | chr8.1:35771495-35771514 | MS.gene068128:CDS | 50.0% | |
| ! | ATGGCTGGCTATGGCTTATG+AGG | - | chr8.1:35773046-35773065 | MS.gene068128:CDS | 50.0% |
| ! | ATTTTTCTCCTCTCGGGTGG+AGG | - | chr8.1:35772686-35772705 | MS.gene068128:intron | 50.0% |
| ! | CGTGCCGTTGAGTTTCTTGA+AGG | - | chr8.1:35772848-35772867 | MS.gene068128:CDS | 50.0% |
| ! | TGATGGTGAGGAAGAGAGTG+AGG | - | chr8.1:35771512-35771531 | MS.gene068128:CDS | 50.0% |
| ! | TTTTTCTCCTCTCGGGTGGA+GGG | - | chr8.1:35772687-35772706 | MS.gene068128:intron | 50.0% |
| !! | CTTTGACTCGGAGAGTGATG+AGG | - | chr8.1:35771370-35771389 | MS.gene068128:intron | 50.0% |
| ACTCGGAGAGTGATGAGGGA+AGG | - | chr8.1:35771375-35771394 | MS.gene068128:intron | 55.0% | |
| GAACTCGGAGCAGAATGGAG+TGG | - | chr8.1:35771346-35771365 | MS.gene068128:intron | 55.0% | |
| GAATCAGGTGGCTAAGGAGC+AGG | - | chr8.1:35772754-35772773 | MS.gene068128:intron | 55.0% | |
| GATGAGGGAAGGAGGGTTAG+GGG | - | chr8.1:35771386-35771405 | MS.gene068128:intron | 55.0% | |
| GGAGAGTGATGAGGGAAGGA+GGG | - | chr8.1:35771379-35771398 | MS.gene068128:intron | 55.0% | |
| GTGATGAGGGAAGGAGGGTT+AGG | - | chr8.1:35771384-35771403 | MS.gene068128:intron | 55.0% | |
| TAAGGAGCAGGCAGAGAGGA+GGG | - | chr8.1:35772766-35772785 | MS.gene068128:intron | 55.0% | |
| ! | GCTTATGGGAGAGGCACGTA+TGG | - | chr8.1:35772824-35772843 | MS.gene068128:CDS | 55.0% |
| !! | GAGTGAGGGTGATGATGGTG+AGG | - | chr8.1:35771500-35771519 | MS.gene068128:CDS | 55.0% |
| AGGGAAGGAGGGTTAGGGGA+TGG | - | chr8.1:35771390-35771409 | MS.gene068128:intron | 60.0% | |
| ATCATCACCCTCCACCCGAG+AGG | + | chr8.1:35772697-35772716 | None:intergenic | 60.0% | |
| CGGAGAGTGATGAGGGAAGG+AGG | - | chr8.1:35771378-35771397 | MS.gene068128:intron | 60.0% | |
| CTAAGGAGCAGGCAGAGAGG+AGG | - | chr8.1:35772765-35772784 | MS.gene068128:intron | 60.0% | |
| GGCTCGTGGGAAGTCGAACT+CGG | - | chr8.1:35771331-35771350 | MS.gene068128:CDS | 60.0% | |
| TGGCTAAGGAGCAGGCAGAG+AGG | - | chr8.1:35772762-35772781 | MS.gene068128:intron | 60.0% | |
| !! | GACGAGTGGTGGTGGCTCGT+GGG | - | chr8.1:35771318-35771337 | MS.gene068128:CDS | 65.0% |
| !! | GCTTTTGAGGGGGAGGCACG+TGG | - | chr8.1:35771296-35771315 | MS.gene068128:CDS | 65.0% |
| GGCACGTGGACGAGTGGTGG+TGG | - | chr8.1:35771310-35771329 | MS.gene068128:CDS | 70.0% | |
| ! | GGAGGCACGTGGACGAGTGG+TGG | - | chr8.1:35771307-35771326 | MS.gene068128:CDS | 70.0% |
| !! | GGACGAGTGGTGGTGGCTCG+TGG | - | chr8.1:35771317-35771336 | MS.gene068128:CDS | 70.0% |
| ! | GGGGGAGGCACGTGGACGAG+TGG | - | chr8.1:35771304-35771323 | MS.gene068128:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 35771147 | 35773243 | 35771147 | ID=MS.gene068128 |
| chr8.1 | mRNA | 35771147 | 35773243 | 35771147 | ID=MS.gene068128.t1;Parent=MS.gene068128 |
| chr8.1 | exon | 35772818 | 35773243 | 35772818 | ID=MS.gene068128.t1.exon1;Parent=MS.gene068128.t1 |
| chr8.1 | CDS | 35772818 | 35773243 | 35772818 | ID=cds.MS.gene068128.t1;Parent=MS.gene068128.t1 |
| chr8.1 | exon | 35771477 | 35771629 | 35771477 | ID=MS.gene068128.t1.exon2;Parent=MS.gene068128.t1 |
| chr8.1 | CDS | 35771477 | 35771629 | 35771477 | ID=cds.MS.gene068128.t1;Parent=MS.gene068128.t1 |
| chr8.1 | exon | 35771147 | 35771352 | 35771147 | ID=MS.gene068128.t1.exon3;Parent=MS.gene068128.t1 |
| chr8.1 | CDS | 35771147 | 35771352 | 35771147 | ID=cds.MS.gene068128.t1;Parent=MS.gene068128.t1 |
| Gene Sequence |
| Protein sequence |
