Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06891.t1 | XP_013461436.1 | 94.6 | 705 | 35 | 1 | 1 | 705 | 1 | 702 | 0.00E+00 | 1231.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06891.t1 | Q9XSC3 | 29.7 | 454 | 266 | 17 | 225 | 664 | 483 | 897 | 2.5e-34 | 148.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06891.t1 | A0A072V1A7 | 94.6 | 705 | 35 | 1 | 1 | 705 | 1 | 702 | 0.0e+00 | 1231.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050084 | MS.gene06891 | 0.811134 | 8.15E-51 | -1.69E-46 |
| MS.gene050085 | MS.gene06891 | 0.819912 | 9.05E-53 | -1.69E-46 |
| MS.gene050384 | MS.gene06891 | 0.800981 | 1.12E-48 | -1.69E-46 |
| MS.gene050386 | MS.gene06891 | 0.802885 | 4.54E-49 | -1.69E-46 |
| MS.gene051381 | MS.gene06891 | 0.819813 | 9.53E-53 | -1.69E-46 |
| MS.gene051382 | MS.gene06891 | 0.807724 | 4.40E-50 | -1.69E-46 |
| MS.gene057131 | MS.gene06891 | 0.943638 | 8.38E-103 | -1.69E-46 |
| MS.gene059007 | MS.gene06891 | 0.809007 | 2.34E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070509 | MS.gene06891 | PPI |
| MS.gene06891 | MS.gene056653 | PPI |
| MS.gene06891 | MS.gene67840 | PPI |
| MS.gene06891 | MS.gene81617 | PPI |
| MS.gene070505 | MS.gene06891 | PPI |
| MS.gene057886 | MS.gene06891 | PPI |
| MS.gene81615 | MS.gene06891 | PPI |
| MS.gene06891 | MS.gene37911 | PPI |
| MS.gene06891 | MS.gene070503 | PPI |
| MS.gene06891 | MS.gene81620 | PPI |
| MS.gene003811 | MS.gene06891 | PPI |
| MS.gene06891 | MS.gene40671 | PPI |
| MS.gene06891 | MS.gene45734 | PPI |
| MS.gene06891 | MS.gene016758 | PPI |
| MS.gene81622 | MS.gene06891 | PPI |
| MS.gene016743 | MS.gene06891 | PPI |
| MS.gene06891 | MS.gene070511 | PPI |
| MS.gene06891 | MS.gene070507 | PPI |
| MS.gene06891 | MS.gene057884 | PPI |
| MS.gene016742 | MS.gene06891 | PPI |
| MS.gene06891 | MS.gene057883 | PPI |
| MS.gene06891 | MS.gene070492 | PPI |
| MS.gene06891 | MS.gene070510 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06891.t1 | MTR_3g491920 | 95.035 | 705 | 32 | 1 | 1 | 705 | 1 | 702 | 0.0 | 1352 |
| MS.gene06891.t1 | MTR_1g007740 | 61.295 | 726 | 239 | 15 | 1 | 703 | 1 | 707 | 0.0 | 838 |
| MS.gene06891.t1 | MTR_8g100005 | 43.232 | 724 | 364 | 15 | 11 | 705 | 9 | 714 | 0.0 | 545 |
| MS.gene06891.t1 | MTR_8g092890 | 38.003 | 671 | 329 | 16 | 46 | 703 | 47 | 643 | 6.94e-126 | 388 |
| MS.gene06891.t1 | MTR_2g079740 | 42.287 | 551 | 252 | 13 | 198 | 705 | 331 | 858 | 4.36e-124 | 390 |
| MS.gene06891.t1 | MTR_3g095780 | 43.685 | 483 | 244 | 7 | 225 | 703 | 168 | 626 | 1.22e-115 | 361 |
| MS.gene06891.t1 | MTR_8g100005 | 41.068 | 487 | 252 | 10 | 11 | 470 | 9 | 487 | 3.24e-110 | 343 |
| MS.gene06891.t1 | MTR_7g060420 | 46.310 | 393 | 194 | 6 | 206 | 588 | 379 | 764 | 8.96e-92 | 308 |
| MS.gene06891.t1 | MTR_4g119620 | 29.075 | 227 | 145 | 9 | 343 | 562 | 66 | 283 | 3.51e-19 | 89.7 |
| MS.gene06891.t1 | MTR_4g119620 | 27.350 | 234 | 140 | 9 | 243 | 464 | 19 | 234 | 2.05e-12 | 69.3 |
| MS.gene06891.t1 | MTR_1g072140 | 25.833 | 240 | 158 | 8 | 330 | 562 | 48 | 274 | 2.54e-18 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06891.t1 | AT5G24320 | 46.741 | 721 | 320 | 16 | 11 | 705 | 12 | 694 | 0.0 | 592 |
| MS.gene06891.t1 | AT5G24320 | 46.759 | 725 | 318 | 17 | 11 | 705 | 12 | 698 | 0.0 | 591 |
| MS.gene06891.t1 | AT5G53500 | 47.207 | 716 | 301 | 15 | 1 | 703 | 1 | 652 | 0.0 | 583 |
| MS.gene06891.t1 | AT5G53500 | 47.207 | 716 | 301 | 15 | 1 | 703 | 1 | 652 | 0.0 | 583 |
| MS.gene06891.t1 | AT5G42010 | 48.308 | 532 | 241 | 13 | 191 | 705 | 195 | 709 | 8.50e-163 | 486 |
| MS.gene06891.t1 | AT1G64610 | 49.242 | 528 | 218 | 14 | 189 | 705 | 159 | 647 | 1.53e-158 | 473 |
| MS.gene06891.t1 | AT1G64610 | 49.242 | 528 | 218 | 14 | 189 | 705 | 159 | 647 | 1.53e-158 | 473 |
| MS.gene06891.t1 | AT5G42010 | 53.824 | 340 | 152 | 4 | 191 | 525 | 195 | 534 | 5.92e-125 | 384 |
| MS.gene06891.t1 | AT5G54200 | 44.246 | 504 | 241 | 11 | 224 | 703 | 336 | 823 | 1.33e-122 | 385 |
| MS.gene06891.t1 | AT3G15470 | 42.074 | 511 | 254 | 11 | 224 | 705 | 386 | 883 | 1.01e-117 | 374 |
| MS.gene06891.t1 | AT1G48870 | 40.612 | 490 | 226 | 11 | 216 | 702 | 163 | 590 | 1.76e-103 | 328 |
| MS.gene06891.t1 | AT1G48870 | 40.612 | 490 | 226 | 11 | 216 | 702 | 163 | 590 | 1.76e-103 | 328 |
| MS.gene06891.t1 | AT1G48870 | 40.612 | 490 | 226 | 11 | 216 | 702 | 163 | 590 | 1.76e-103 | 328 |
| MS.gene06891.t1 | AT5G02430 | 39.499 | 519 | 267 | 13 | 224 | 702 | 384 | 895 | 1.92e-94 | 313 |
| MS.gene06891.t1 | AT2G37670 | 39.847 | 522 | 262 | 13 | 226 | 702 | 379 | 893 | 1.47e-92 | 308 |
| MS.gene06891.t1 | AT2G37670 | 39.847 | 522 | 262 | 13 | 226 | 702 | 380 | 894 | 1.60e-92 | 308 |
| MS.gene06891.t1 | AT3G49660 | 23.385 | 325 | 176 | 12 | 245 | 562 | 18 | 276 | 1.23e-17 | 85.1 |
| MS.gene06891.t1 | AT2G16405 | 25.214 | 234 | 159 | 4 | 343 | 560 | 202 | 435 | 1.79e-14 | 77.0 |
| MS.gene06891.t1 | AT5G67320 | 24.691 | 243 | 142 | 9 | 243 | 449 | 357 | 594 | 1.35e-11 | 68.2 |
Find 169 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATTGACACCATTGTTTA+TGG | 0.074372 | 3.2:-77272055 | MS.gene06891:CDS |
| GATTCCCAACTATGCTTAAT+TGG | 0.172014 | 3.2:-77270959 | MS.gene06891:CDS |
| CAGAGGGATAACTGGCTTTC+AGG | 0.188767 | 3.2:-77270918 | MS.gene06891:intron |
| ATGCTTGAGGGGTCAATTTC+AGG | 0.194762 | 3.2:+77272102 | None:intergenic |
| AAGAGGATGTTGTGTCTATT+AGG | 0.227175 | 3.2:-77272929 | MS.gene06891:CDS |
| GAGGAGAAGCTTCCTGTTTC+GGG | 0.230139 | 3.2:-77270213 | MS.gene06891:CDS |
| CGAGGAGAAGCTTCCTGTTT+CGG | 0.236200 | 3.2:-77270214 | MS.gene06891:CDS |
| GTACAGGTAGCCCGTAATTT+TGG | 0.245270 | 3.2:+77270052 | None:intergenic |
| GCCATCTCAAGATGGAAATT+TGG | 0.253348 | 3.2:-77272595 | MS.gene06891:CDS |
| ACATGTAACCATAACTTTCT+TGG | 0.275795 | 3.2:+77270782 | None:intergenic |
| TGGTTACTAGAACGGTAAAT+AGG | 0.280748 | 3.2:-77272425 | MS.gene06891:CDS |
| CCTAACTTTCTTAGATTTCA+TGG | 0.283800 | 3.2:+77270443 | None:intergenic |
| GAGAAAGAAGCAGGTGGGTT+GGG | 0.287380 | 3.2:+77270291 | None:intergenic |
| TCCAACAACCGGAAGATCTT+AGG | 0.295299 | 3.2:+77271964 | None:intergenic |
| GATGCGCACCTTTCCGTCTA+TGG | 0.305937 | 3.2:+77271522 | None:intergenic |
| GTGAGTTCTTCGGAGGAATT+TGG | 0.313989 | 3.2:-77272639 | MS.gene06891:CDS |
| CTACGCTCTCTCACACTCTT+TGG | 0.324124 | 3.2:+77272822 | None:intergenic |
| GGGATTGTTGGATCTTTAGA+AGG | 0.327630 | 3.2:-77271321 | MS.gene06891:CDS |
| GTGGTGAAGATGGGGTTGTT+CGG | 0.332946 | 3.2:-77272170 | MS.gene06891:CDS |
| GACACCATTGTTTATGGATA+AGG | 0.339226 | 3.2:-77272049 | MS.gene06891:CDS |
| CTTCCTGGCAGAGGGATAAC+TGG | 0.340161 | 3.2:-77270926 | MS.gene06891:CDS |
| TGGTGAAGATGGGGTTGTTC+GGG | 0.350996 | 3.2:-77272169 | MS.gene06891:CDS |
| ATTGATAGATAGAGAGTTTG+AGG | 0.355153 | 3.2:-77272463 | MS.gene06891:CDS |
| TTCGGAGGAATTTGGTTTAG+TGG | 0.361491 | 3.2:-77272631 | MS.gene06891:CDS |
| AGGACTCTAATGTATATCTA+TGG | 0.364797 | 3.2:-77270494 | MS.gene06891:CDS |
| TAGTCCTGATGGGCAGTATC+TGG | 0.368035 | 3.2:-77272199 | MS.gene06891:CDS |
| GAGGATTGTGTAAATGTCTC+TGG | 0.370035 | 3.2:-77272504 | MS.gene06891:CDS |
| TGGGCATAGAAGTGAAGTTT+TGG | 0.376344 | 3.2:-77271920 | MS.gene06891:CDS |
| TAGACGGAAAGGTGCGCATC+TGG | 0.381026 | 3.2:-77271519 | MS.gene06891:CDS |
| CCGATTCTCAGGTTGTTGAT+TGG | 0.381470 | 3.2:-77271489 | MS.gene06891:CDS |
| GCCTAAGATCTTCCGGTTGT+TGG | 0.381485 | 3.2:-77271965 | MS.gene06891:CDS |
| CCATGAAATCTAAGAAAGTT+AGG | 0.382192 | 3.2:-77270443 | MS.gene06891:CDS |
| GAAGGGAGCTATGCAGTCTC+AGG | 0.387775 | 3.2:-77272339 | MS.gene06891:CDS |
| ATGAAATAATCTTCATCAAC+AGG | 0.393624 | 3.2:+77271553 | None:intergenic |
| CTGACAAAACTGTCCGACTA+TGG | 0.394030 | 3.2:-77271759 | MS.gene06891:CDS |
| GTTGATAATGATAGAGAAGA+AGG | 0.394764 | 3.2:-77272357 | MS.gene06891:CDS |
| TTGCTCTAGTGTGAGTTCTT+CGG | 0.402105 | 3.2:-77272649 | MS.gene06891:CDS |
| AGAAAGAAGCAGGTGGGTTG+GGG | 0.408797 | 3.2:+77270292 | None:intergenic |
| TCAAGATTCCAAGAAAGTTA+TGG | 0.411964 | 3.2:-77270790 | MS.gene06891:CDS |
| CTGGCTACAGGTGGTGAAGA+TGG | 0.415140 | 3.2:-77272180 | MS.gene06891:CDS |
| TTGATTATGAAGTGTGGATT+CGG | 0.416684 | 3.2:-77272848 | MS.gene06891:CDS |
| TTGGTCTTGGAGCCCGAAAC+AGG | 0.417453 | 3.2:+77270201 | None:intergenic |
| GCGGTCTTTCTCATGCTCTT+CGG | 0.420033 | 3.2:+77272012 | None:intergenic |
| AAGTCACACTTCATTTCAAA+CGG | 0.422322 | 3.2:+77270029 | None:intergenic |
| GGTTACTAGAACGGTAAATA+GGG | 0.425943 | 3.2:-77272424 | MS.gene06891:CDS |
| TTCCAAAGGGATCTGCAACC+TGG | 0.426271 | 3.2:-77270239 | MS.gene06891:CDS |
| ATATCTATGGAACGTTAATC+AGG | 0.429417 | 3.2:-77270481 | MS.gene06891:CDS |
| GGCCAGGTTGCAGATCCCTT+TGG | 0.430320 | 3.2:+77270237 | None:intergenic |
| ACCCCACGCATGAGCATTGT+TGG | 0.432490 | 3.2:+77270119 | None:intergenic |
| TTTACCAATTAAGCATAGTT+GGG | 0.432871 | 3.2:+77270955 | None:intergenic |
| CTGGACGATACCCGATTCTC+AGG | 0.435686 | 3.2:-77271500 | MS.gene06891:CDS |
| CCCATCAGGACTAAATTTCA+TGG | 0.436002 | 3.2:+77272209 | None:intergenic |
| TTAAATAATACCTGCCCATC+CGG | 0.437117 | 3.2:+77271427 | None:intergenic |
| CCAATCAACAACCTGAGAAT+CGG | 0.440688 | 3.2:+77271489 | None:intergenic |
| GTATAACAGGGAGGGATTGT+TGG | 0.454570 | 3.2:-77271333 | MS.gene06891:intron |
| TGGTCATTGTGACTGCAGGC+TGG | 0.456531 | 3.2:-77270095 | MS.gene06891:CDS |
| AAATTGCACCTTCATGCGCT+TGG | 0.462786 | 3.2:+77272235 | None:intergenic |
| ACCATGAAATTTAGTCCTGA+TGG | 0.466588 | 3.2:-77272210 | MS.gene06891:CDS |
| TCGGGTGTGGCAAGTGGTTG+AGG | 0.469415 | 3.2:-77272151 | MS.gene06891:CDS |
| TACCGCAACTGATGCGTTTG+AGG | 0.470561 | 3.2:+77270404 | None:intergenic |
| CAATGCTCATGCGTGGGGTA+TGG | 0.470834 | 3.2:-77270115 | MS.gene06891:CDS |
| CTAACTTTCTTAGATTTCAT+GGG | 0.472148 | 3.2:+77270444 | None:intergenic |
| GATCTTTAGAAGGAAATTGT+TGG | 0.473234 | 3.2:-77271311 | MS.gene06891:CDS |
| TGGCTACAGGTGGTGAAGAT+GGG | 0.475427 | 3.2:-77272179 | MS.gene06891:CDS |
| GTAGCCAGATACTGCCCATC+AGG | 0.476689 | 3.2:+77272195 | None:intergenic |
| TCACAAGTCAGAATCCTTGA+TGG | 0.477119 | 3.2:-77270753 | MS.gene06891:CDS |
| AGGATTGTGTAAATGTCTCT+GGG | 0.480040 | 3.2:-77272503 | MS.gene06891:CDS |
| ACATTGGACTGCCTGTGTTA+AGG | 0.480580 | 3.2:+77270562 | None:intergenic |
| TTGTGACTGCAGGCTGGGAC+GGG | 0.481187 | 3.2:-77270089 | MS.gene06891:CDS |
| AGAGGATGTTGTGTCTATTA+GGG | 0.481348 | 3.2:-77272928 | MS.gene06891:CDS |
| AAGATGGGGTTGTTCGGGTG+TGG | 0.485043 | 3.2:-77272164 | MS.gene06891:CDS |
| GATGGGCAGTATCTGGCTAC+AGG | 0.486225 | 3.2:-77272192 | MS.gene06891:CDS |
| AGGAAGCTTCTCCTCGGGCC+AGG | 0.488808 | 3.2:+77270221 | None:intergenic |
| AACGGTAAATAGGGCGAGAA+GGG | 0.489976 | 3.2:-77272415 | MS.gene06891:CDS |
| ATTGTGACTGCAGGCTGGGA+CGG | 0.490386 | 3.2:-77270090 | MS.gene06891:CDS |
| CAATCAACAACCTGAGAATC+GGG | 0.492398 | 3.2:+77271490 | None:intergenic |
| AAATCAGTTGGTAGTTGCTA+AGG | 0.492824 | 3.2:-77272532 | MS.gene06891:CDS |
| AGAGAAAGAAGCAGGTGGGT+TGG | 0.493090 | 3.2:+77270290 | None:intergenic |
| ACTTCATTTCAAACGGGTAC+AGG | 0.498608 | 3.2:+77270036 | None:intergenic |
| ACCAGATAATCACTTGCAGC+TGG | 0.500109 | 3.2:-77270981 | MS.gene06891:intron |
| GAAACAGGAAGCTTCTCCTC+GGG | 0.503691 | 3.2:+77270216 | None:intergenic |
| CGAAACAGGAAGCTTCTCCT+CGG | 0.504206 | 3.2:+77270215 | None:intergenic |
| AGTCACACTTCATTTCAAAC+GGG | 0.505736 | 3.2:+77270030 | None:intergenic |
| TCCAAATTTCCATCTTGAGA+TGG | 0.506574 | 3.2:+77272594 | None:intergenic |
| AAAGAGTGTGAGAGAGCGTA+GGG | 0.507140 | 3.2:-77272820 | MS.gene06891:CDS |
| ACTGTAAAGTAAATGCTTGA+GGG | 0.510241 | 3.2:+77272090 | None:intergenic |
| AACATCATTGCTGCGAAAGT+CGG | 0.511514 | 3.2:-77270175 | MS.gene06891:CDS |
| AGTGAATCGTGACCATTGCT+TGG | 0.512373 | 3.2:-77271734 | MS.gene06891:CDS |
| ACGCATCAGTTGCGGTACCT+TGG | 0.514857 | 3.2:-77270398 | MS.gene06891:CDS |
| GAAATTTGGAGAAAAGAATG+AGG | 0.519213 | 3.2:-77272581 | MS.gene06891:CDS |
| AACTTTCATCGCTTTACTTG+AGG | 0.524102 | 3.2:-77272266 | MS.gene06891:CDS |
| ATGTTATCGACCGGATGGGC+AGG | 0.526250 | 3.2:-77271437 | MS.gene06891:intron |
| AATCATATGGGTAGTTTCAG+TGG | 0.527946 | 3.2:-77272981 | None:intergenic |
| TTGATAATGATAGAGAAGAA+GGG | 0.528008 | 3.2:-77272356 | MS.gene06891:CDS |
| TCAGTGGAGAAGAAGATTGT+CGG | 0.529362 | 3.2:-77272965 | MS.gene06891:CDS |
| GGGGAGGTTTATGAAGAGCA+TGG | 0.530487 | 3.2:-77272799 | MS.gene06891:CDS |
| TAAATAGGGCGAGAAGGGGT+TGG | 0.531097 | 3.2:-77272410 | MS.gene06891:CDS |
| AGATAGTAGTGGTTCTGAAG+AGG | 0.531135 | 3.2:-77272703 | MS.gene06891:CDS |
| CACTGTAAAGTAAATGCTTG+AGG | 0.537714 | 3.2:+77272089 | None:intergenic |
| GCTATGCAGTCTCAGGGTGT+AGG | 0.538360 | 3.2:-77272332 | MS.gene06891:CDS |
| ATAACTTTCTTGGAATCTTG+AGG | 0.539357 | 3.2:+77270792 | None:intergenic |
| AAATCACATTAAGCCCATCA+AGG | 0.539545 | 3.2:+77270739 | None:intergenic |
| GACTGCAGTATGTTATCGAC+CGG | 0.543308 | 3.2:-77271446 | MS.gene06891:CDS |
| AGAGAGTTTGAGGATGCAGA+TGG | 0.543559 | 3.2:-77272453 | MS.gene06891:CDS |
| TCTGGGGTGTCTCATTGTCA+AGG | 0.544039 | 3.2:-77272486 | MS.gene06891:CDS |
| AAGTAAAGGTCCGTCAATGT+AGG | 0.547509 | 3.2:-77272302 | MS.gene06891:CDS |
| TGTGCATCATTTACCTCAGA+CGG | 0.548187 | 3.2:-77270540 | MS.gene06891:CDS |
| GGTATGGTCATTGTGACTGC+AGG | 0.549386 | 3.2:-77270099 | MS.gene06891:CDS |
| CCATGAAATTTAGTCCTGAT+GGG | 0.550381 | 3.2:-77272209 | MS.gene06891:CDS |
| TGGTTCAGAGAGAAAGAAGC+AGG | 0.550963 | 3.2:+77270282 | None:intergenic |
| TTCCTCAAACGCATCAGTTG+CGG | 0.553600 | 3.2:-77270406 | MS.gene06891:CDS |
| GGTCATTGTGACTGCAGGCT+GGG | 0.557152 | 3.2:-77270094 | MS.gene06891:CDS |
| CACAAGTCAGAATCCTTGAT+GGG | 0.560457 | 3.2:-77270752 | MS.gene06891:CDS |
| GAGTGATTGTTCAAATCAGT+TGG | 0.560983 | 3.2:-77272544 | MS.gene06891:CDS |
| TAAAATATGTTTCCCGTCTG+AGG | 0.561223 | 3.2:+77270527 | None:intergenic |
| TACCAACAATGCTCATGCGT+GGG | 0.562604 | 3.2:-77270121 | MS.gene06891:CDS |
| GGTTGTTCGGGTGTGGCAAG+TGG | 0.564414 | 3.2:-77272157 | MS.gene06891:CDS |
| GCAGTATGTTATCGACCGGA+TGG | 0.565468 | 3.2:-77271442 | MS.gene06891:CDS |
| CAAAGAGTGTGAGAGAGCGT+AGG | 0.568692 | 3.2:-77272821 | MS.gene06891:CDS |
| CACGATTCACTTGCCATAGT+CGG | 0.575462 | 3.2:+77271746 | None:intergenic |
| AACCATTGCATGAGTTCCGT+GGG | 0.575505 | 3.2:-77271939 | MS.gene06891:CDS |
| GAACGGTAAATAGGGCGAGA+AGG | 0.577669 | 3.2:-77272416 | MS.gene06891:CDS |
| TTCATGAGTGGATCCATAGA+CGG | 0.577690 | 3.2:-77271535 | MS.gene06891:CDS |
| AAAAGAAACTTCCTGGCAGA+GGG | 0.579638 | 3.2:-77270934 | MS.gene06891:CDS |
| GATGAAGATTATTTCATGAG+TGG | 0.580770 | 3.2:-77271547 | MS.gene06891:CDS |
| GGGAGGTTTATGAAGAGCAT+GGG | 0.583225 | 3.2:-77272798 | MS.gene06891:CDS |
| CTCTAGTGTGAGTTCTTCGG+AGG | 0.585376 | 3.2:-77272646 | MS.gene06891:CDS |
| AAGCCAGTTATCCCTCTGCC+AGG | 0.589263 | 3.2:+77270923 | None:intergenic |
| AAACCATTGCATGAGTTCCG+TGG | 0.589350 | 3.2:-77271940 | MS.gene06891:CDS |
| GGCTACAGGTGGTGAAGATG+GGG | 0.590519 | 3.2:-77272178 | MS.gene06891:CDS |
| CAAGATATCCAAGCGCATGA+AGG | 0.592474 | 3.2:-77272243 | MS.gene06891:CDS |
| CTGTAAAGTAAATGCTTGAG+GGG | 0.592786 | 3.2:+77272091 | None:intergenic |
| GAAAGAAGAAGAGATAGTAG+TGG | 0.594074 | 3.2:-77272714 | MS.gene06891:CDS |
| TGGTGATGTGGTTACTAGAA+CGG | 0.595840 | 3.2:-77272433 | MS.gene06891:CDS |
| AATAACTTGCCATCTCAAGA+TGG | 0.595950 | 3.2:-77272603 | MS.gene06891:CDS |
| GGTAGTTGCTAAGGAATCTG+AGG | 0.598779 | 3.2:-77272523 | MS.gene06891:CDS |
| GGAGGTTTCAAACCGTGCCA+AGG | 0.598891 | 3.2:+77270381 | None:intergenic |
| GAGTGGATCCATAGACGGAA+AGG | 0.601829 | 3.2:-77271530 | MS.gene06891:CDS |
| AAACTTCACTTCTATGCCCA+CGG | 0.602774 | 3.2:+77271923 | None:intergenic |
| GTGTAGGCTTCAGAAAGTAA+AGG | 0.602811 | 3.2:-77272316 | MS.gene06891:CDS |
| GTGCATCATTTACCTCAGAC+GGG | 0.603220 | 3.2:-77270539 | MS.gene06891:CDS |
| GAGGTAAATGATGCACACAT+TGG | 0.603566 | 3.2:+77270546 | None:intergenic |
| TAACTTTCTTAGATTTCATG+GGG | 0.605262 | 3.2:+77270445 | None:intergenic |
| AAGAGGAATTTAGTTCATGT+CGG | 0.608009 | 3.2:-77272686 | MS.gene06891:CDS |
| GTGAAAACACTTCCAAGCAA+TGG | 0.611173 | 3.2:+77271722 | None:intergenic |
| TGCCCACGGAACTCATGCAA+TGG | 0.612153 | 3.2:+77271937 | None:intergenic |
| AAATTTGGAGAAAAGAATGA+GGG | 0.614888 | 3.2:-77272580 | MS.gene06891:CDS |
| AGAGTGTGAGAGAGCGTAGG+GGG | 0.617428 | 3.2:-77272818 | MS.gene06891:CDS |
| CAGTATGTTATCGACCGGAT+GGG | 0.618616 | 3.2:-77271441 | MS.gene06891:CDS |
| TCAGTTGCGGTACCTTGGCA+CGG | 0.626640 | 3.2:-77270393 | MS.gene06891:CDS |
| TTCAGAGAGAAAGAAGCAGG+TGG | 0.627337 | 3.2:+77270285 | None:intergenic |
| ACAACCGGAAGATCTTAGGC+GGG | 0.627533 | 3.2:+77271968 | None:intergenic |
| AACAACACAAGCTGAATCTG+CGG | 0.632119 | 3.2:+77271993 | None:intergenic |
| TCAATGTAGGAAGAAAATGA+AGG | 0.633828 | 3.2:-77272289 | MS.gene06891:CDS |
| GTACCAACAATGCTCATGCG+TGG | 0.637345 | 3.2:-77270122 | MS.gene06891:CDS |
| TCAGAGAGAAAGAAGCAGGT+GGG | 0.641323 | 3.2:+77270286 | None:intergenic |
| TGAGGATGCAGATGGTGATG+TGG | 0.643720 | 3.2:-77272445 | MS.gene06891:CDS |
| AACAACCGGAAGATCTTAGG+CGG | 0.646128 | 3.2:+77271967 | None:intergenic |
| AAGGGAGCTATGCAGTCTCA+GGG | 0.648697 | 3.2:-77272338 | MS.gene06891:CDS |
| GGGATCTGCAACCTGGCCCG+AGG | 0.648859 | 3.2:-77270232 | MS.gene06891:CDS |
| ACCAACAATGCTCATGCGTG+GGG | 0.652027 | 3.2:-77270120 | MS.gene06891:CDS |
| TGTAATTGCATAACAACTTG+TGG | 0.663052 | 3.2:+77270315 | None:intergenic |
| GGTGTGGCAAGTGGTTGAGG+AGG | 0.668449 | 3.2:-77272148 | MS.gene06891:CDS |
| ACGGTAAATAGGGCGAGAAG+GGG | 0.672129 | 3.2:-77272414 | MS.gene06891:CDS |
| AGAAAGTTAGGTCTTGTGAG+CGG | 0.675224 | 3.2:-77270431 | MS.gene06891:CDS |
| GGGCAGTATCTGGCTACAGG+TGG | 0.702356 | 3.2:-77272189 | MS.gene06891:CDS |
| ATTGAGATCGATGACGTGCG+TGG | 0.720656 | 3.2:-77272379 | MS.gene06891:CDS |
| AAGAGTGTGAGAGAGCGTAG+GGG | 0.726141 | 3.2:-77272819 | MS.gene06891:CDS |
| GGATTGTGTAAATGTCTCTG+GGG | 0.731454 | 3.2:-77272502 | MS.gene06891:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAACTTAAATGGAATA+TGG | + | chr3.2:77271786-77271805 | None:intergenic | 15.0% |
| !! | AAATGTTAATCAAGTTATAT+TGG | - | chr3.2:77271923-77271942 | MS.gene06891:CDS | 15.0% |
| !! | AATGTTAATCAAGTTATATT+GGG | - | chr3.2:77271924-77271943 | MS.gene06891:CDS | 15.0% |
| !! | ATAAAAACATTCCAAAATTA+CGG | - | chr3.2:77272956-77272975 | MS.gene06891:CDS | 15.0% |
| !!! | GTTTTAATAATCAAAATGTT+AGG | - | chr3.2:77271844-77271863 | MS.gene06891:intron | 15.0% |
| !! | GAATAATATGATGTATAACA+GGG | - | chr3.2:77271674-77271693 | MS.gene06891:intron | 20.0% |
| !! | TAAAAACATTCCAAAATTAC+GGG | - | chr3.2:77272957-77272976 | MS.gene06891:CDS | 20.0% |
| !!! | AAATTCATTGTATTTTGAGA+AGG | - | chr3.2:77270271-77270290 | MS.gene06891:CDS | 20.0% |
| !!! | AGAATACTATCTAAAATTTG+AGG | + | chr3.2:77272362-77272381 | None:intergenic | 20.0% |
| !!! | ATAACTTGATTAACATTTTG+CGG | + | chr3.2:77271921-77271940 | None:intergenic | 20.0% |
| !!! | GTTCATTACATTTTATTTTC+AGG | - | chr3.2:77272434-77272453 | MS.gene06891:CDS | 20.0% |
| !!! | TGTTGGTTTTATAAAATATC+AGG | - | chr3.2:77271725-77271744 | MS.gene06891:CDS | 20.0% |
| ! | AAATGGAATATGGAGATATA+TGG | + | chr3.2:77271776-77271795 | None:intergenic | 25.0% |
| ! | AAATTTGGAGAAAAGAATGA+GGG | - | chr3.2:77270439-77270458 | MS.gene06891:CDS | 25.0% |
| ! | AAGCACATGTTTAAATTGAA+TGG | + | chr3.2:77271632-77271651 | None:intergenic | 25.0% |
| ! | AATGGAATATGGAGATATAT+GGG | + | chr3.2:77271775-77271794 | None:intergenic | 25.0% |
| ! | AATTATATGTTCTGTCACTA+AGG | - | chr3.2:77272412-77272431 | MS.gene06891:CDS | 25.0% |
| ! | AATTGAAAACCAGAAATGTT+AGG | + | chr3.2:77272009-77272028 | None:intergenic | 25.0% |
| ! | ATGAAATAATCTTCATCAAC+AGG | + | chr3.2:77271469-77271488 | None:intergenic | 25.0% |
| ! | CGAATAATATGATGTATAAC+AGG | - | chr3.2:77271673-77271692 | MS.gene06891:intron | 25.0% |
| ! | CTAACTTTCTTAGATTTCAT+GGG | + | chr3.2:77272578-77272597 | None:intergenic | 25.0% |
| ! | GGGTCAAAAAATAACTTAAA+TGG | + | chr3.2:77271793-77271812 | None:intergenic | 25.0% |
| ! | TAACTTTCTTAGATTTCATG+GGG | + | chr3.2:77272577-77272596 | None:intergenic | 25.0% |
| ! | TACTTCTTATTCAAAATCTG+TGG | + | chr3.2:77271883-77271902 | None:intergenic | 25.0% |
| ! | TTTAAACATGTGCTTTATAG+AGG | - | chr3.2:77271637-77271656 | MS.gene06891:intron | 25.0% |
| ! | TTTACCAATTAAGCATAGTT+GGG | + | chr3.2:77272067-77272086 | None:intergenic | 25.0% |
| ! | TTTATGGATAAGGAAAAACT+TGG | - | chr3.2:77270980-77270999 | MS.gene06891:intron | 25.0% |
| !! | ATGATGATGATGATGATAAA+GGG | - | chr3.2:77270129-77270148 | MS.gene06891:CDS | 25.0% |
| !! | CACAATTTGTTTGTATTTGA+TGG | - | chr3.2:77271413-77271432 | MS.gene06891:intron | 25.0% |
| !! | CTTTTTCTCTGACAATTTTT+TGG | - | chr3.2:77272167-77272186 | MS.gene06891:CDS | 25.0% |
| !! | GACATTCAATTGTTCATTTT+CGG | + | chr3.2:77272669-77272688 | None:intergenic | 25.0% |
| !! | TTTTACCAATTAAGCATAGT+TGG | + | chr3.2:77272068-77272087 | None:intergenic | 25.0% |
| !! | TTTTCCTTATCCATAAACAA+TGG | + | chr3.2:77270977-77270996 | None:intergenic | 25.0% |
| !!! | TTGATAATGATAGAGAAGAA+GGG | - | chr3.2:77270663-77270682 | MS.gene06891:intron | 25.0% |
| !!! | TTGATTTTGATTATGAAGTG+TGG | - | chr3.2:77270165-77270184 | MS.gene06891:CDS | 25.0% |
| !!! | TTTTGAGAAGGAAAAGATTA+TGG | - | chr3.2:77270283-77270302 | MS.gene06891:CDS | 25.0% |
| AAGAAGATACTGCATTCAAA+AGG | + | chr3.2:77271230-77271249 | None:intergenic | 30.0% | |
| AAGACTCCAAGAAAAAATCT+TGG | + | chr3.2:77272760-77272779 | None:intergenic | 30.0% | |
| AATATGATGTATAACAGGGA+GGG | - | chr3.2:77271678-77271697 | MS.gene06891:intron | 30.0% | |
| ACATGTAACCATAACTTTCT+TGG | + | chr3.2:77272240-77272259 | None:intergenic | 30.0% | |
| ACTGTAAAGTAAATGCTTGA+GGG | + | chr3.2:77270932-77270951 | None:intergenic | 30.0% | |
| AGGACTCTAATGTATATCTA+TGG | - | chr3.2:77272525-77272544 | MS.gene06891:CDS | 30.0% | |
| AGTATGTAGGGATTTAACAA+AGG | + | chr3.2:77272325-77272344 | None:intergenic | 30.0% | |
| ATAACTTTCTTGGAATCTTG+AGG | + | chr3.2:77272230-77272249 | None:intergenic | 30.0% | |
| ATATCTATGGAACGTTAATC+AGG | - | chr3.2:77272538-77272557 | MS.gene06891:CDS | 30.0% | |
| ATCATCATCATCATCATCAT+CGG | + | chr3.2:77270126-77270145 | None:intergenic | 30.0% | |
| ATTGATAGATAGAGAGTTTG+AGG | - | chr3.2:77270556-77270575 | MS.gene06891:CDS | 30.0% | |
| ATTGGTAAAAAGAAACTTCC+TGG | - | chr3.2:77272078-77272097 | MS.gene06891:CDS | 30.0% | |
| CCATGAAATCTAAGAAAGTT+AGG | - | chr3.2:77272576-77272595 | MS.gene06891:CDS | 30.0% | |
| CCTAACTTTCTTAGATTTCA+TGG | + | chr3.2:77272579-77272598 | None:intergenic | 30.0% | |
| GAAATTTGGAGAAAAGAATG+AGG | - | chr3.2:77270438-77270457 | MS.gene06891:CDS | 30.0% | |
| GATGAAGATTATTTCATGAG+TGG | - | chr3.2:77271472-77271491 | MS.gene06891:CDS | 30.0% | |
| TAATATGATGTATAACAGGG+AGG | - | chr3.2:77271677-77271696 | MS.gene06891:intron | 30.0% | |
| TCAAGATTCCAAGAAAGTTA+TGG | - | chr3.2:77272229-77272248 | MS.gene06891:CDS | 30.0% | |
| TCAATGTAGGAAGAAAATGA+AGG | - | chr3.2:77270730-77270749 | MS.gene06891:CDS | 30.0% | |
| TCAATTGACACCATTGTTTA+TGG | - | chr3.2:77270964-77270983 | MS.gene06891:CDS | 30.0% | |
| TGTAATTGCATAACAACTTG+TGG | + | chr3.2:77272707-77272726 | None:intergenic | 30.0% | |
| TTGATTATGAAGTGTGGATT+CGG | - | chr3.2:77270171-77270190 | MS.gene06891:CDS | 30.0% | |
| ! | AAGAGGAATTTAGTTCATGT+CGG | - | chr3.2:77270333-77270352 | MS.gene06891:CDS | 30.0% |
| ! | AATTGTTCATTTTCGGAGAT+TGG | + | chr3.2:77272662-77272681 | None:intergenic | 30.0% |
| ! | GATCTTTAGAAGGAAATTGT+TGG | - | chr3.2:77271708-77271727 | MS.gene06891:intron | 30.0% |
| ! | GATGATGATGATGATGATAA+AGG | - | chr3.2:77270128-77270147 | MS.gene06891:CDS | 30.0% |
| ! | GTGTTTTCACACAGTAATTA+TGG | - | chr3.2:77271310-77271329 | MS.gene06891:CDS | 30.0% |
| ! | TCATTTTCTTCCTACATTGA+CGG | + | chr3.2:77270730-77270749 | None:intergenic | 30.0% |
| ! | TGATGATGATGATGATAAAG+GGG | - | chr3.2:77270130-77270149 | MS.gene06891:CDS | 30.0% |
| !! | GTTGATAATGATAGAGAAGA+AGG | - | chr3.2:77270662-77270681 | MS.gene06891:intron | 30.0% |
| !!! | CAATGATGTTTTTTTGGTCT+TGG | + | chr3.2:77272834-77272853 | None:intergenic | 30.0% |
| !!! | TCTGAACCAAGATTTTTTCT+TGG | - | chr3.2:77272751-77272770 | MS.gene06891:CDS | 30.0% |
| !!! | TTTTTTGACCCTTCGATTTT+TGG | - | chr3.2:77271802-77271821 | MS.gene06891:intron | 30.0% |
| AAATCACATTAAGCCCATCA+AGG | + | chr3.2:77272283-77272302 | None:intergenic | 35.0% | |
| AACTTTCATCGCTTTACTTG+AGG | - | chr3.2:77270753-77270772 | MS.gene06891:CDS | 35.0% | |
| AAGAGGATGTTGTGTCTATT+AGG | - | chr3.2:77270090-77270109 | MS.gene06891:CDS | 35.0% | |
| AATCACTTAAGACTTGAGCT+TGG | - | chr3.2:77271982-77272001 | MS.gene06891:CDS | 35.0% | |
| AATTGTGAGATGAACTGTTG+TGG | + | chr3.2:77271400-77271419 | None:intergenic | 35.0% | |
| ACCATGAAATTTAGTCCTGA+TGG | - | chr3.2:77270809-77270828 | MS.gene06891:intron | 35.0% | |
| ACCTAAAGAAGCCTACAAAT+CGG | + | chr3.2:77271358-77271377 | None:intergenic | 35.0% | |
| AGAGGATGTTGTGTCTATTA+GGG | - | chr3.2:77270091-77270110 | MS.gene06891:CDS | 35.0% | |
| AGGATTGTGTAAATGTCTCT+GGG | - | chr3.2:77270516-77270535 | MS.gene06891:CDS | 35.0% | |
| CACTGTAAAGTAAATGCTTG+AGG | + | chr3.2:77270933-77270952 | None:intergenic | 35.0% | |
| CCATGAAATTTAGTCCTGAT+GGG | - | chr3.2:77270810-77270829 | MS.gene06891:intron | 35.0% | |
| CTGTAAAGTAAATGCTTGAG+GGG | + | chr3.2:77270931-77270950 | None:intergenic | 35.0% | |
| CTGTTGTGGTCAAACAAATT+AGG | + | chr3.2:77271386-77271405 | None:intergenic | 35.0% | |
| GAAAGAAGAAGAGATAGTAG+TGG | - | chr3.2:77270305-77270324 | MS.gene06891:CDS | 35.0% | |
| GACACCATTGTTTATGGATA+AGG | - | chr3.2:77270970-77270989 | MS.gene06891:CDS | 35.0% | |
| GAGTGATTGTTCAAATCAGT+TGG | - | chr3.2:77270475-77270494 | MS.gene06891:CDS | 35.0% | |
| GATTCCCAACTATGCTTAAT+TGG | - | chr3.2:77272060-77272079 | MS.gene06891:CDS | 35.0% | |
| GCGAAATCAACAAGTATGTA+GGG | + | chr3.2:77272337-77272356 | None:intergenic | 35.0% | |
| GGTTACTAGAACGGTAAATA+GGG | - | chr3.2:77270595-77270614 | MS.gene06891:intron | 35.0% | |
| TAAAATATGTTTCCCGTCTG+AGG | + | chr3.2:77272495-77272514 | None:intergenic | 35.0% | |
| TCCAAATTTCCATCTTGAGA+TGG | + | chr3.2:77270428-77270447 | None:intergenic | 35.0% | |
| TGCGAAATCAACAAGTATGT+AGG | + | chr3.2:77272338-77272357 | None:intergenic | 35.0% | |
| TGGTTACTAGAACGGTAAAT+AGG | - | chr3.2:77270594-77270613 | MS.gene06891:intron | 35.0% | |
| TTAAATAATACCTGCCCATC+CGG | + | chr3.2:77271595-77271614 | None:intergenic | 35.0% | |
| ! | AATAACTTGCCATCTCAAGA+TGG | - | chr3.2:77270416-77270435 | MS.gene06891:CDS | 35.0% |
| ! | ACATATTTTATCAGCATGCG+AGG | - | chr3.2:77272505-77272524 | MS.gene06891:CDS | 35.0% |
| ! | GCATTTCTATTCCGATTTGT+AGG | - | chr3.2:77271344-77271363 | MS.gene06891:intron | 35.0% |
| ! | TTCTTGGAGTCTTTTCCAAA+GGG | - | chr3.2:77272767-77272786 | MS.gene06891:CDS | 35.0% |
| ! | TTTCTTGGAGTCTTTTCCAA+AGG | - | chr3.2:77272766-77272785 | MS.gene06891:CDS | 35.0% |
| !! | AAATCAGTTGGTAGTTGCTA+AGG | - | chr3.2:77270487-77270506 | MS.gene06891:CDS | 35.0% |
| !! | CAGAAGTACCAAAAATCGAA+GGG | + | chr3.2:77271813-77271832 | None:intergenic | 35.0% |
| !! | TCAGAAGTACCAAAAATCGA+AGG | + | chr3.2:77271814-77271833 | None:intergenic | 35.0% |
| !! | TTATTTTCAGGCCTTAACAC+AGG | - | chr3.2:77272446-77272465 | MS.gene06891:CDS | 35.0% |
| !!! | TCGCAGCAATGATGTTTTTT+TGG | + | chr3.2:77272840-77272859 | None:intergenic | 35.0% |
| AAAAAGAAACTTCCTGGCAG+AGG | - | chr3.2:77272084-77272103 | MS.gene06891:CDS | 40.0% | |
| AAAAGAAACTTCCTGGCAGA+GGG | - | chr3.2:77272085-77272104 | MS.gene06891:CDS | 40.0% | |
| AAACTTCACTTCTATGCCCA+CGG | + | chr3.2:77271099-77271118 | None:intergenic | 40.0% | |
| AACAACACAAGCTGAATCTG+CGG | + | chr3.2:77271029-77271048 | None:intergenic | 40.0% | |
| AACATCATTGCTGCGAAAGT+CGG | - | chr3.2:77272844-77272863 | MS.gene06891:CDS | 40.0% | |
| AAGTAAAGGTCCGTCAATGT+AGG | - | chr3.2:77270717-77270736 | MS.gene06891:intron | 40.0% | |
| CAATCAACAACCTGAGAATC+GGG | + | chr3.2:77271532-77271551 | None:intergenic | 40.0% | |
| CACAAGTCAGAATCCTTGAT+GGG | - | chr3.2:77272267-77272286 | MS.gene06891:CDS | 40.0% | |
| CCAATCAACAACCTGAGAAT+CGG | + | chr3.2:77271533-77271552 | None:intergenic | 40.0% | |
| CCCATCAGGACTAAATTTCA+TGG | + | chr3.2:77270813-77270832 | None:intergenic | 40.0% | |
| GAGGATTGTGTAAATGTCTC+TGG | - | chr3.2:77270515-77270534 | MS.gene06891:CDS | 40.0% | |
| GAGGTAAATGATGCACACAT+TGG | + | chr3.2:77272476-77272495 | None:intergenic | 40.0% | |
| GCCATCTCAAGATGGAAATT+TGG | - | chr3.2:77270424-77270443 | MS.gene06891:CDS | 40.0% | |
| GGATTGTGTAAATGTCTCTG+GGG | - | chr3.2:77270517-77270536 | MS.gene06891:CDS | 40.0% | |
| GGGATTGTTGGATCTTTAGA+AGG | - | chr3.2:77271698-77271717 | MS.gene06891:intron | 40.0% | |
| GTGAAAACACTTCCAAGCAA+TGG | + | chr3.2:77271300-77271319 | None:intergenic | 40.0% | |
| GTGTAGGCTTCAGAAAGTAA+AGG | - | chr3.2:77270703-77270722 | MS.gene06891:intron | 40.0% | |
| TCACAAGTCAGAATCCTTGA+TGG | - | chr3.2:77272266-77272285 | MS.gene06891:CDS | 40.0% | |
| TCAGTGGAGAAGAAGATTGT+CGG | - | chr3.2:77270054-77270073 | MS.gene06891:CDS | 40.0% | |
| TGTGCATCATTTACCTCAGA+CGG | - | chr3.2:77272479-77272498 | MS.gene06891:CDS | 40.0% | |
| TTCATGAGTGGATCCATAGA+CGG | - | chr3.2:77271484-77271503 | MS.gene06891:CDS | 40.0% | |
| TTGCTCTAGTGTGAGTTCTT+CGG | - | chr3.2:77270370-77270389 | MS.gene06891:CDS | 40.0% | |
| ! | AGAAAGTTAGGTCTTGTGAG+CGG | - | chr3.2:77272588-77272607 | MS.gene06891:CDS | 40.0% |
| ! | GCAATGGTTTTTCCAACAAC+CGG | + | chr3.2:77271069-77271088 | None:intergenic | 40.0% |
| ! | TCCGATTTGTAGGCTTCTTT+AGG | - | chr3.2:77271354-77271373 | MS.gene06891:intron | 40.0% |
| ! | TGGGCATAGAAGTGAAGTTT+TGG | - | chr3.2:77271099-77271118 | MS.gene06891:intron | 40.0% |
| ! | TGGTGATGTGGTTACTAGAA+CGG | - | chr3.2:77270586-77270605 | MS.gene06891:intron | 40.0% |
| ! | TGTTCATTTTCGGAGATTGG+AGG | + | chr3.2:77272659-77272678 | None:intergenic | 40.0% |
| ! | TTCGGAGGAATTTGGTTTAG+TGG | - | chr3.2:77270388-77270407 | MS.gene06891:CDS | 40.0% |
| !! | AGATAGTAGTGGTTCTGAAG+AGG | - | chr3.2:77270316-77270335 | MS.gene06891:CDS | 40.0% |
| !!! | GTGAAGTTTTGGATCTCTCT+TGG | - | chr3.2:77271110-77271129 | MS.gene06891:intron | 40.0% |
| !!! | TCGGTTTTTTGATGCTGAAG+AGG | - | chr3.2:77270073-77270092 | MS.gene06891:CDS | 40.0% |
| AAACCATTGCATGAGTTCCG+TGG | - | chr3.2:77271079-77271098 | MS.gene06891:intron | 45.0% | |
| AAATTGCACCTTCATGCGCT+TGG | + | chr3.2:77270787-77270806 | None:intergenic | 45.0% | |
| AACAACCGGAAGATCTTAGG+CGG | + | chr3.2:77271055-77271074 | None:intergenic | 45.0% | |
| AACCATTGCATGAGTTCCGT+GGG | - | chr3.2:77271080-77271099 | MS.gene06891:intron | 45.0% | |
| AACGGTAAATAGGGCGAGAA+GGG | - | chr3.2:77270604-77270623 | MS.gene06891:intron | 45.0% | |
| ACATTGGACTGCCTGTGTTA+AGG | + | chr3.2:77272460-77272479 | None:intergenic | 45.0% | |
| ACCAGATAATCACTTGCAGC+TGG | - | chr3.2:77272038-77272057 | MS.gene06891:CDS | 45.0% | |
| AGAGAGTTTGAGGATGCAGA+TGG | - | chr3.2:77270566-77270585 | MS.gene06891:CDS | 45.0% | |
| AGTGAATCGTGACCATTGCT+TGG | - | chr3.2:77271285-77271304 | MS.gene06891:intron | 45.0% | |
| ATGCTTGAGGGGTCAATTTC+AGG | + | chr3.2:77270920-77270939 | None:intergenic | 45.0% | |
| CAAGATATCCAAGCGCATGA+AGG | - | chr3.2:77270776-77270795 | MS.gene06891:CDS | 45.0% | |
| CACGATTCACTTGCCATAGT+CGG | + | chr3.2:77271276-77271295 | None:intergenic | 45.0% | |
| CAGTATGTTATCGACCGGAT+GGG | - | chr3.2:77271578-77271597 | MS.gene06891:intron | 45.0% | |
| CTGACAAAACTGTCCGACTA+TGG | - | chr3.2:77271260-77271279 | MS.gene06891:intron | 45.0% | |
| GACTGCAGTATGTTATCGAC+CGG | - | chr3.2:77271573-77271592 | MS.gene06891:CDS | 45.0% | |
| GAGCTTGGTCCTAACATTTC+TGG | - | chr3.2:77271997-77272016 | MS.gene06891:CDS | 45.0% | |
| GGTAGTTGCTAAGGAATCTG+AGG | - | chr3.2:77270496-77270515 | MS.gene06891:CDS | 45.0% | |
| GTATAACAGGGAGGGATTGT+TGG | - | chr3.2:77271686-77271705 | MS.gene06891:intron | 45.0% | |
| GTGAGTTCTTCGGAGGAATT+TGG | - | chr3.2:77270380-77270399 | MS.gene06891:CDS | 45.0% | |
| GTGCATCATTTACCTCAGAC+GGG | - | chr3.2:77272480-77272499 | MS.gene06891:CDS | 45.0% | |
| TACCAACAATGCTCATGCGT+GGG | - | chr3.2:77272898-77272917 | MS.gene06891:CDS | 45.0% | |
| TCAGAGAGAAAGAAGCAGGT+GGG | + | chr3.2:77272736-77272755 | None:intergenic | 45.0% | |
| TCCAACAACCGGAAGATCTT+AGG | + | chr3.2:77271058-77271077 | None:intergenic | 45.0% | |
| TCCAGCTGCAAGTGATTATC+TGG | + | chr3.2:77272042-77272061 | None:intergenic | 45.0% | |
| TGGTTCAGAGAGAAAGAAGC+AGG | + | chr3.2:77272740-77272759 | None:intergenic | 45.0% | |
| TTCAGAGAGAAAGAAGCAGG+TGG | + | chr3.2:77272737-77272756 | None:intergenic | 45.0% | |
| TTCCTCAAACGCATCAGTTG+CGG | - | chr3.2:77272613-77272632 | MS.gene06891:CDS | 45.0% | |
| ! | AAAGAGTGTGAGAGAGCGTA+GGG | - | chr3.2:77270199-77270218 | MS.gene06891:CDS | 45.0% |
| ! | CCGATTCTCAGGTTGTTGAT+TGG | - | chr3.2:77271530-77271549 | MS.gene06891:CDS | 45.0% |
| ! | GGGAGGTTTATGAAGAGCAT+GGG | - | chr3.2:77270221-77270240 | MS.gene06891:CDS | 45.0% |
| ! | GTACAGGTAGCCCGTAATTT+TGG | + | chr3.2:77272970-77272989 | None:intergenic | 45.0% |
| ! | TTTTCCCGCCTAAGATCTTC+CGG | - | chr3.2:77271047-77271066 | MS.gene06891:intron | 45.0% |
| AAGGGAGCTATGCAGTCTCA+GGG | - | chr3.2:77270681-77270700 | MS.gene06891:intron | 50.0% | |
| ACAACCGGAAGATCTTAGGC+GGG | + | chr3.2:77271054-77271073 | None:intergenic | 50.0% | |
| ACCAACAATGCTCATGCGTG+GGG | - | chr3.2:77272899-77272918 | MS.gene06891:CDS | 50.0% | |
| ACGGTAAATAGGGCGAGAAG+GGG | - | chr3.2:77270605-77270624 | MS.gene06891:intron | 50.0% | |
| AGAGAAAGAAGCAGGTGGGT+TGG | + | chr3.2:77272732-77272751 | None:intergenic | 50.0% | |
| ATTGAGATCGATGACGTGCG+TGG | - | chr3.2:77270640-77270659 | MS.gene06891:intron | 50.0% | |
| CGAAACAGGAAGCTTCTCCT+CGG | + | chr3.2:77272807-77272826 | None:intergenic | 50.0% | |
| CGAGGAGAAGCTTCCTGTTT+CGG | - | chr3.2:77272805-77272824 | MS.gene06891:CDS | 50.0% | |
| CTACGCTCTCTCACACTCTT+TGG | + | chr3.2:77270200-77270219 | None:intergenic | 50.0% | |
| CTCTAGTGTGAGTTCTTCGG+AGG | - | chr3.2:77270373-77270392 | MS.gene06891:CDS | 50.0% | |
| GAAACAGGAAGCTTCTCCTC+GGG | + | chr3.2:77272806-77272825 | None:intergenic | 50.0% | |
| GAACGGTAAATAGGGCGAGA+AGG | - | chr3.2:77270603-77270622 | MS.gene06891:intron | 50.0% | |
| GAGGAGAAGCTTCCTGTTTC+GGG | - | chr3.2:77272806-77272825 | MS.gene06891:CDS | 50.0% | |
| GAGTGGATCCATAGACGGAA+AGG | - | chr3.2:77271489-77271508 | MS.gene06891:CDS | 50.0% | |
| GCAGTATGTTATCGACCGGA+TGG | - | chr3.2:77271577-77271596 | MS.gene06891:intron | 50.0% | |
| GCCTAAGATCTTCCGGTTGT+TGG | - | chr3.2:77271054-77271073 | MS.gene06891:intron | 50.0% | |
| GCGGTCTTTCTCATGCTCTT+CGG | + | chr3.2:77271010-77271029 | None:intergenic | 50.0% | |
| GGGGAGGTTTATGAAGAGCA+TGG | - | chr3.2:77270220-77270239 | MS.gene06891:CDS | 50.0% | |
| GGTATGGTCATTGTGACTGC+AGG | - | chr3.2:77272920-77272939 | MS.gene06891:CDS | 50.0% | |
| GTACCAACAATGCTCATGCG+TGG | - | chr3.2:77272897-77272916 | MS.gene06891:CDS | 50.0% | |
| GTGGTGAAGATGGGGTTGTT+CGG | - | chr3.2:77270849-77270868 | MS.gene06891:intron | 50.0% | |
| TAAATAGGGCGAGAAGGGGT+TGG | - | chr3.2:77270609-77270628 | MS.gene06891:intron | 50.0% | |
| TACCGCAACTGATGCGTTTG+AGG | + | chr3.2:77272618-77272637 | None:intergenic | 50.0% | |
| TGGCTACAGGTGGTGAAGAT+GGG | - | chr3.2:77270840-77270859 | MS.gene06891:intron | 50.0% | |
| TGGTGAAGATGGGGTTGTTC+GGG | - | chr3.2:77270850-77270869 | MS.gene06891:intron | 50.0% | |
| TTCCAAAGGGATCTGCAACC+TGG | - | chr3.2:77272780-77272799 | MS.gene06891:CDS | 50.0% | |
| ! | AAGAGTGTGAGAGAGCGTAG+GGG | - | chr3.2:77270200-77270219 | MS.gene06891:CDS | 50.0% |
| ! | CAAAGAGTGTGAGAGAGCGT+AGG | - | chr3.2:77270198-77270217 | MS.gene06891:CDS | 50.0% |
| ! | GAGAAAGAAGCAGGTGGGTT+GGG | + | chr3.2:77272731-77272750 | None:intergenic | 50.0% |
| ! | TAGTCCTGATGGGCAGTATC+TGG | - | chr3.2:77270820-77270839 | MS.gene06891:intron | 50.0% |
| ! | TCTGGGGTGTCTCATTGTCA+AGG | - | chr3.2:77270533-77270552 | MS.gene06891:CDS | 50.0% |
| ! | TGAGGATGCAGATGGTGATG+TGG | - | chr3.2:77270574-77270593 | MS.gene06891:intron | 50.0% |
| !! | AGAAAGAAGCAGGTGGGTTG+GGG | + | chr3.2:77272730-77272749 | None:intergenic | 50.0% |
| !! | CAGAGGGATAACTGGCTTTC+AGG | - | chr3.2:77272101-77272120 | MS.gene06891:CDS | 50.0% |
| AAGATGGGGTTGTTCGGGTG+TGG | - | chr3.2:77270855-77270874 | MS.gene06891:intron | 55.0% | |
| AAGCCAGTTATCCCTCTGCC+AGG | + | chr3.2:77272099-77272118 | None:intergenic | 55.0% | |
| ACGCATCAGTTGCGGTACCT+TGG | - | chr3.2:77272621-77272640 | MS.gene06891:CDS | 55.0% | |
| ATGTTATCGACCGGATGGGC+AGG | - | chr3.2:77271582-77271601 | MS.gene06891:intron | 55.0% | |
| ATTGTGACTGCAGGCTGGGA+CGG | - | chr3.2:77272929-77272948 | MS.gene06891:CDS | 55.0% | |
| CAATGCTCATGCGTGGGGTA+TGG | - | chr3.2:77272904-77272923 | MS.gene06891:CDS | 55.0% | |
| CTGGACGATACCCGATTCTC+AGG | - | chr3.2:77271519-77271538 | MS.gene06891:CDS | 55.0% | |
| CTGGCTACAGGTGGTGAAGA+TGG | - | chr3.2:77270839-77270858 | MS.gene06891:intron | 55.0% | |
| CTTCCTGGCAGAGGGATAAC+TGG | - | chr3.2:77272093-77272112 | MS.gene06891:CDS | 55.0% | |
| GAAGGGAGCTATGCAGTCTC+AGG | - | chr3.2:77270680-77270699 | MS.gene06891:intron | 55.0% | |
| GATGCGCACCTTTCCGTCTA+TGG | + | chr3.2:77271500-77271519 | None:intergenic | 55.0% | |
| GATGGGCAGTATCTGGCTAC+AGG | - | chr3.2:77270827-77270846 | MS.gene06891:intron | 55.0% | |
| GCTATGCAGTCTCAGGGTGT+AGG | - | chr3.2:77270687-77270706 | MS.gene06891:intron | 55.0% | |
| GGAGGTTTCAAACCGTGCCA+AGG | + | chr3.2:77272641-77272660 | None:intergenic | 55.0% | |
| GGCTACAGGTGGTGAAGATG+GGG | - | chr3.2:77270841-77270860 | MS.gene06891:intron | 55.0% | |
| GGTCATTGTGACTGCAGGCT+GGG | - | chr3.2:77272925-77272944 | MS.gene06891:CDS | 55.0% | |
| GTAGCCAGATACTGCCCATC+AGG | + | chr3.2:77270827-77270846 | None:intergenic | 55.0% | |
| TCAGTTGCGGTACCTTGGCA+CGG | - | chr3.2:77272626-77272645 | MS.gene06891:CDS | 55.0% | |
| TGCCCACGGAACTCATGCAA+TGG | + | chr3.2:77271085-77271104 | None:intergenic | 55.0% | |
| TGGTCATTGTGACTGCAGGC+TGG | - | chr3.2:77272924-77272943 | MS.gene06891:CDS | 55.0% | |
| ! | ACCCCACGCATGAGCATTGT+TGG | + | chr3.2:77272903-77272922 | None:intergenic | 55.0% |
| ! | AGAGTGTGAGAGAGCGTAGG+GGG | - | chr3.2:77270201-77270220 | MS.gene06891:CDS | 55.0% |
| ! | TAGACGGAAAGGTGCGCATC+TGG | - | chr3.2:77271500-77271519 | MS.gene06891:CDS | 55.0% |
| !! | TTGGTCTTGGAGCCCGAAAC+AGG | + | chr3.2:77272821-77272840 | None:intergenic | 55.0% |
| GGCCAGGTTGCAGATCCCTT+TGG | + | chr3.2:77272785-77272804 | None:intergenic | 60.0% | |
| GGGCAGTATCTGGCTACAGG+TGG | - | chr3.2:77270830-77270849 | MS.gene06891:intron | 60.0% | |
| GGTGTGGCAAGTGGTTGAGG+AGG | - | chr3.2:77270871-77270890 | MS.gene06891:intron | 60.0% | |
| GGTTGTTCGGGTGTGGCAAG+TGG | - | chr3.2:77270862-77270881 | MS.gene06891:intron | 60.0% | |
| TCGGGTGTGGCAAGTGGTTG+AGG | - | chr3.2:77270868-77270887 | MS.gene06891:intron | 60.0% | |
| TTGTGACTGCAGGCTGGGAC+GGG | - | chr3.2:77272930-77272949 | MS.gene06891:CDS | 60.0% | |
| AGGAAGCTTCTCCTCGGGCC+AGG | + | chr3.2:77272801-77272820 | None:intergenic | 65.0% | |
| ! | GTGTGAGAGAGCGTAGGGGG+AGG | - | chr3.2:77270204-77270223 | MS.gene06891:CDS | 65.0% |
| GGGATCTGCAACCTGGCCCG+AGG | - | chr3.2:77272787-77272806 | MS.gene06891:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 77270044 | 77272997 | 77270044 | ID=MS.gene06891 |
| chr3.2 | mRNA | 77270044 | 77272997 | 77270044 | ID=MS.gene06891.t1;Parent=MS.gene06891 |
| chr3.2 | exon | 77271897 | 77272997 | 77271897 | ID=MS.gene06891.t1.exon1;Parent=MS.gene06891.t1 |
| chr3.2 | CDS | 77271897 | 77272997 | 77271897 | ID=cds.MS.gene06891.t1;Parent=MS.gene06891.t1 |
| chr3.2 | exon | 77271710 | 77271800 | 77271710 | ID=MS.gene06891.t1.exon2;Parent=MS.gene06891.t1 |
| chr3.2 | CDS | 77271710 | 77271800 | 77271710 | ID=cds.MS.gene06891.t1;Parent=MS.gene06891.t1 |
| chr3.2 | exon | 77271438 | 77271595 | 77271438 | ID=MS.gene06891.t1.exon3;Parent=MS.gene06891.t1 |
| chr3.2 | CDS | 77271438 | 77271595 | 77271438 | ID=cds.MS.gene06891.t1;Parent=MS.gene06891.t1 |
| chr3.2 | exon | 77271295 | 77271346 | 77271295 | ID=MS.gene06891.t1.exon4;Parent=MS.gene06891.t1 |
| chr3.2 | CDS | 77271295 | 77271346 | 77271295 | ID=cds.MS.gene06891.t1;Parent=MS.gene06891.t1 |
| chr3.2 | exon | 77270919 | 77270998 | 77270919 | ID=MS.gene06891.t1.exon5;Parent=MS.gene06891.t1 |
| chr3.2 | CDS | 77270919 | 77270998 | 77270919 | ID=cds.MS.gene06891.t1;Parent=MS.gene06891.t1 |
| chr3.2 | exon | 77270727 | 77270820 | 77270727 | ID=MS.gene06891.t1.exon6;Parent=MS.gene06891.t1 |
| chr3.2 | CDS | 77270727 | 77270820 | 77270727 | ID=cds.MS.gene06891.t1;Parent=MS.gene06891.t1 |
| chr3.2 | exon | 77270044 | 77270585 | 77270044 | ID=MS.gene06891.t1.exon7;Parent=MS.gene06891.t1 |
| chr3.2 | CDS | 77270044 | 77270585 | 77270044 | ID=cds.MS.gene06891.t1;Parent=MS.gene06891.t1 |
| Gene Sequence |
| Protein sequence |
