Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069005.t1 | XP_003623356.1 | 96.6 | 265 | 9 | 0 | 1 | 265 | 1 | 265 | 3.80E-144 | 520.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069005.t1 | Q93VH9 | 90.4 | 260 | 25 | 0 | 1 | 260 | 1 | 260 | 1.3e-140 | 500.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069005.t1 | G7KT73 | 96.6 | 265 | 9 | 0 | 1 | 265 | 1 | 265 | 2.7e-144 | 520.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene069005 | MS.gene43012 | PPI |
| MS.gene069005 | MS.gene42236 | PPI |
| MS.gene069005 | MS.gene74487 | PPI |
| MS.gene069005 | MS.gene99501 | PPI |
| MS.gene069005 | MS.gene041181 | PPI |
| MS.gene069005 | MS.gene010439 | PPI |
| MS.gene069005 | MS.gene035447 | PPI |
| MS.gene069005 | MS.gene59369 | PPI |
| MS.gene069005 | MS.gene38870 | PPI |
| MS.gene069005 | MS.gene82426 | PPI |
| MS.gene069005 | MS.gene53517 | PPI |
| MS.gene069005 | MS.gene028153 | PPI |
| MS.gene069005 | MS.gene95672 | PPI |
| MS.gene047717 | MS.gene069005 | PPI |
| MS.gene069005 | MS.gene071029 | PPI |
| MS.gene069005 | MS.gene032440 | PPI |
| MS.gene43012 | MS.gene069005 | PPI |
| MS.gene069005 | MS.gene073888 | PPI |
| MS.gene069005 | MS.gene27648 | PPI |
| MS.gene069005 | MS.gene053443 | PPI |
| MS.gene069005 | MS.gene83444 | PPI |
| MS.gene069005 | MS.gene047717 | PPI |
| MS.gene069005 | MS.gene023799 | PPI |
| MS.gene069005 | MS.gene52173 | PPI |
| MS.gene069005 | MS.gene72768 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069005.t1 | MTR_7g069950 | 96.604 | 265 | 9 | 0 | 1 | 265 | 1 | 265 | 0.0 | 531 |
| MS.gene069005.t1 | MTR_4g014590 | 95.833 | 264 | 11 | 0 | 1 | 264 | 1 | 264 | 0.0 | 525 |
| MS.gene069005.t1 | MTR_5g018940 | 96.016 | 251 | 10 | 0 | 1 | 251 | 1 | 251 | 0.0 | 503 |
| MS.gene069005.t1 | MTR_5g018940 | 96.016 | 251 | 10 | 0 | 1 | 251 | 1 | 251 | 0.0 | 503 |
| MS.gene069005.t1 | MTR_8g052030 | 96.016 | 251 | 10 | 0 | 1 | 251 | 1 | 251 | 0.0 | 503 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069005.t1 | AT5G07090 | 90.494 | 263 | 24 | 1 | 1 | 263 | 1 | 262 | 0.0 | 507 |
| MS.gene069005.t1 | AT2G17360 | 90.385 | 260 | 25 | 0 | 1 | 260 | 1 | 260 | 0.0 | 506 |
| MS.gene069005.t1 | AT5G58420 | 90.494 | 263 | 24 | 1 | 1 | 263 | 1 | 262 | 0.0 | 506 |
| MS.gene069005.t1 | AT5G07090 | 89.796 | 245 | 24 | 1 | 19 | 263 | 1 | 244 | 6.53e-170 | 469 |
| MS.gene069005.t1 | AT5G07090 | 89.796 | 245 | 24 | 1 | 19 | 263 | 1 | 244 | 6.53e-170 | 469 |
| MS.gene069005.t1 | AT2G17360 | 91.160 | 181 | 16 | 0 | 1 | 181 | 1 | 181 | 1.61e-125 | 354 |
Find 82 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTAGTTTGATTGTGTCAT+TGG | 0.330535 | 7.2:+33642081 | None:intergenic |
| CTATCCTGATCCCTTAATTA+AGG | 0.333320 | 7.2:-33642104 | MS.gene069005:CDS |
| CAATTTGATACCTCTGCCTT+TGG | 0.333358 | 7.2:+33641832 | None:intergenic |
| TTGGGTAATGTCTTCACTAT+TGG | 0.340154 | 7.2:-33641884 | MS.gene069005:CDS |
| CATCTGGACCACACAAATCT+AGG | 0.341173 | 7.2:-33642803 | MS.gene069005:CDS |
| AAGGTACGATCTGTTCAGTT+TGG | 0.367239 | 7.2:-33642175 | MS.gene069005:CDS |
| CAACGCCATGTTCTAGTTGA+TGG | 0.371743 | 7.2:-33642699 | MS.gene069005:CDS |
| TGTGGTCCAGATGACGGCTT+TGG | 0.371859 | 7.2:+33642813 | None:intergenic |
| TGTGTCATTGGCCTTAATTA+AGG | 0.374818 | 7.2:+33642093 | None:intergenic |
| AGGTACGATCTGTTCAGTTT+GGG | 0.392472 | 7.2:-33642174 | MS.gene069005:CDS |
| GTGGTCCAGATGACGGCTTT+GGG | 0.392493 | 7.2:+33642814 | None:intergenic |
| GTGTCATTGGCCTTAATTAA+GGG | 0.398727 | 7.2:+33642094 | None:intergenic |
| GCGGATGGTGCGCCCATCAT+AGG | 0.403365 | 7.2:+33642126 | None:intergenic |
| TGATGTGGGGAATGTTGTTA+TGG | 0.412773 | 7.2:-33642023 | MS.gene069005:CDS |
| CATGAGTTTGCAACCCGATT+GGG | 0.418547 | 7.2:-33641902 | MS.gene069005:CDS |
| TAGGCCCCAAAGCCGTCATC+TGG | 0.419333 | 7.2:-33642819 | MS.gene069005:CDS |
| GGGAATGTTGTTATGGTGAC+TGG | 0.420835 | 7.2:-33642016 | MS.gene069005:CDS |
| TTCTAGTTGATGGCAAAGTT+AGG | 0.423367 | 7.2:-33642689 | MS.gene069005:CDS |
| GCAGATGGCTGCTTCTCAAC+AGG | 0.434949 | 7.2:-33641786 | MS.gene069005:CDS |
| AATTTGATACCTCTGCCTTT+GGG | 0.436861 | 7.2:+33641833 | None:intergenic |
| CCGTATCTGAACACCTATGA+TGG | 0.440673 | 7.2:-33642139 | MS.gene069005:CDS |
| TTATCAAGCATCCAATGCTT+TGG | 0.443903 | 7.2:+33642954 | None:intergenic |
| CTGTTCAGTTTGGGCAGAAA+GGG | 0.449051 | 7.2:-33642165 | MS.gene069005:CDS |
| TGGCAAAGGGTCGAAACCTT+GGG | 0.450674 | 7.2:-33641864 | MS.gene069005:CDS |
| TTAGTCTGTTCCTCAAGATA+AGG | 0.453432 | 7.2:+33642763 | None:intergenic |
| GTGTTGGTGTCATCAAGAAC+AGG | 0.454082 | 7.2:-33641976 | MS.gene069005:CDS |
| TTCCTTTGATCCTTATCTTG+AGG | 0.458746 | 7.2:-33642773 | MS.gene069005:CDS |
| TTGGCCTTAATTAAGGGATC+AGG | 0.459395 | 7.2:+33642100 | None:intergenic |
| TTGGCAAAGGGTCGAAACCT+TGG | 0.468363 | 7.2:-33641865 | MS.gene069005:CDS |
| CATTGGATGCTTGATAAGCT+TGG | 0.492483 | 7.2:-33642948 | MS.gene069005:CDS |
| TAGTGAAGACATTACCCAAT+CGG | 0.493541 | 7.2:+33641888 | None:intergenic |
| TCTGTTCAGTTTGGGCAGAA+AGG | 0.500744 | 7.2:-33642166 | MS.gene069005:CDS |
| CCATCATAGGTGTTCAGATA+CGG | 0.503673 | 7.2:+33642139 | None:intergenic |
| GATTTCATCAAATTTGATGT+GGG | 0.506606 | 7.2:-33642037 | MS.gene069005:CDS |
| ATTCATGTCCAGGATGCTAC+TGG | 0.515866 | 7.2:-33641926 | MS.gene069005:CDS |
| AGTGAAGACATTACCCAATC+GGG | 0.517824 | 7.2:+33641889 | None:intergenic |
| TCATGAGTTTGCAACCCGAT+TGG | 0.519695 | 7.2:-33641903 | MS.gene069005:CDS |
| ACTCATGACCAGTAGCATCC+TGG | 0.521067 | 7.2:+33641918 | None:intergenic |
| TGATTTCATCAAATTTGATG+TGG | 0.528965 | 7.2:-33642038 | MS.gene069005:CDS |
| GGCTCAATGCTCCAAAGCAT+TGG | 0.529449 | 7.2:-33642965 | MS.gene069005:CDS |
| TGACACAATCAAACTAGACT+TGG | 0.533545 | 7.2:-33642077 | MS.gene069005:CDS |
| CGTCTTCTGTATGACACAAA+GGG | 0.544988 | 7.2:-33642391 | MS.gene069005:CDS |
| GATTTGTGTGGTCCAGATGA+CGG | 0.548493 | 7.2:+33642807 | None:intergenic |
| TGGATGCTTGATAAGCTTGG+CGG | 0.554660 | 7.2:-33642945 | MS.gene069005:CDS |
| AGTAGCATCCTGGACATGAA+TGG | 0.557858 | 7.2:+33641928 | None:intergenic |
| TCTCATGTATTTCAGGCAAG+AGG | 0.562113 | 7.2:-33643008 | MS.gene069005:intron |
| CCCATACCCATAAAACCAGC+AGG | 0.563703 | 7.2:+33642651 | None:intergenic |
| CCGTCTTCTGTATGACACAA+AGG | 0.564065 | 7.2:-33642392 | MS.gene069005:CDS |
| AATGTCTTCACTATTGGCAA+AGG | 0.564811 | 7.2:-33641878 | MS.gene069005:CDS |
| TATCAAATTGACAGTCATTG+AGG | 0.565699 | 7.2:-33641819 | MS.gene069005:CDS |
| TTCCTCAAGATAAGGATCAA+AGG | 0.570517 | 7.2:+33642771 | None:intergenic |
| CGTATCTGAACACCTATGAT+GGG | 0.570756 | 7.2:-33642138 | MS.gene069005:CDS |
| ATTTCATCAAATTTGATGTG+GGG | 0.571477 | 7.2:-33642036 | MS.gene069005:CDS |
| ATGTCTTCACTATTGGCAAA+GGG | 0.574289 | 7.2:-33641877 | MS.gene069005:CDS |
| AACATGGCGTTGCATCAAGA+TGG | 0.575014 | 7.2:+33642710 | None:intergenic |
| TGACAGTCATTGAGGAGGCA+AGG | 0.581078 | 7.2:-33641811 | MS.gene069005:CDS |
| ATCTGGACCACACAAATCTA+GGG | 0.581480 | 7.2:-33642802 | MS.gene069005:CDS |
| TGTAAGAGATGATGAGGCAA+AGG | 0.582799 | 7.2:-33642350 | MS.gene069005:intron |
| CATCTCTTACAGAGTGAAGA+CGG | 0.591848 | 7.2:+33642362 | None:intergenic |
| TTTGCAGTTTAAGCTTTGCA+AGG | 0.600506 | 7.2:-33642194 | MS.gene069005:intron |
| TCAAGATAAGGATCAAAGGA+AGG | 0.604671 | 7.2:+33642775 | None:intergenic |
| GTTTGAAGAAACATTTGAAG+CGG | 0.606217 | 7.2:-33642986 | MS.gene069005:CDS |
| GTGTCTCTTCCCAAAGGCAG+AGG | 0.606870 | 7.2:-33641842 | MS.gene069005:CDS |
| CTTTGCCATCAACTAGAACA+TGG | 0.608997 | 7.2:+33642694 | None:intergenic |
| TGAGGAGGCAAGGAAGCAGA+TGG | 0.613182 | 7.2:-33641801 | MS.gene069005:CDS |
| CCTTTGTGTCATACAGAAGA+CGG | 0.617391 | 7.2:+33642392 | None:intergenic |
| GGAAGGAACAGAGGTCGTGT+TGG | 0.620629 | 7.2:-33641992 | MS.gene069005:CDS |
| TCACTCTGTAAGAGATGATG+AGG | 0.626858 | 7.2:-33642356 | MS.gene069005:CDS |
| TGGTCCAGATGACGGCTTTG+GGG | 0.632723 | 7.2:+33642815 | None:intergenic |
| GATGGCTGCTTCTCAACAGG+TGG | 0.634091 | 7.2:-33641783 | MS.gene069005:CDS |
| ACAGACAAGACATATCCTGC+TGG | 0.635500 | 7.2:-33642666 | MS.gene069005:CDS |
| CCTTGGGTGTCTCTTCCCAA+AGG | 0.641736 | 7.2:-33641848 | MS.gene069005:CDS |
| TAATTAAGGGATCAGGATAG+CGG | 0.651946 | 7.2:+33642107 | None:intergenic |
| TAAGGGATCAGGATAGCGGA+TGG | 0.659733 | 7.2:+33642111 | None:intergenic |
| CAAATTGACAGTCATTGAGG+AGG | 0.668339 | 7.2:-33641816 | MS.gene069005:CDS |
| CCTTTGGGAAGAGACACCCA+AGG | 0.673569 | 7.2:+33641848 | None:intergenic |
| TTGTTATGGTGACTGGAGGA+AGG | 0.681094 | 7.2:-33642009 | MS.gene069005:CDS |
| AATGTTGTTATGGTGACTGG+AGG | 0.681623 | 7.2:-33642013 | MS.gene069005:CDS |
| AGGCACTCCCTAGATTTGTG+TGG | 0.684968 | 7.2:+33642795 | None:intergenic |
| AAGAACAGGGAGAAACACAA+AGG | 0.701200 | 7.2:-33641962 | MS.gene069005:CDS |
| TGTTGGTGTCATCAAGAACA+GGG | 0.707054 | 7.2:-33641975 | MS.gene069005:CDS |
| GTGACTGGAGGAAGGAACAG+AGG | 0.708346 | 7.2:-33642001 | MS.gene069005:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAAATCAATATAAAGA+AGG | + | chr7.2:33643830-33643849 | None:intergenic | 10.0% |
| !!! | AATTTTTTACTTTGAATAAT+TGG | - | chr7.2:33643479-33643498 | MS.gene069005:intron | 10.0% |
| !! | AAAAATTATAGATATTGTGA+AGG | + | chr7.2:33643751-33643770 | None:intergenic | 15.0% |
| !! | AAATCATCAAACATTATTAA+TGG | + | chr7.2:33642608-33642627 | None:intergenic | 15.0% |
| !!! | ACATCTACAAATAATTTTAA+GGG | + | chr7.2:33642773-33642792 | None:intergenic | 15.0% |
| !!! | TTTTATGTTCTTAACTAAAA+CGG | + | chr7.2:33642094-33642113 | None:intergenic | 15.0% |
| !! | CTTAAAATTATTTGTAGATG+TGG | - | chr7.2:33642772-33642791 | MS.gene069005:CDS | 20.0% |
| !! | TATATAGACATTAATGATGT+AGG | - | chr7.2:33642728-33642747 | MS.gene069005:CDS | 20.0% |
| !! | TTTATGTTCTTAACTAAAAC+GGG | + | chr7.2:33642093-33642112 | None:intergenic | 20.0% |
| !!! | ATTGAATTTCTTTGTTGTAT+AGG | - | chr7.2:33643227-33643246 | MS.gene069005:intron | 20.0% |
| !!! | ATTTTTGTTGATTGTAATGT+TGG | - | chr7.2:33641854-33641873 | MS.gene069005:CDS | 20.0% |
| !!! | CACATCTACAAATAATTTTA+AGG | + | chr7.2:33642774-33642793 | None:intergenic | 20.0% |
| !!! | GAGTTTATTTCAAGTTAATT+TGG | + | chr7.2:33642225-33642244 | None:intergenic | 20.0% |
| !!! | TCTGTTTGAATTTTATTATC+TGG | - | chr7.2:33641996-33642015 | MS.gene069005:CDS | 20.0% |
| !!! | TGTGAATGAAATTTTAATGT+TGG | - | chr7.2:33641941-33641960 | MS.gene069005:CDS | 20.0% |
| !!! | TTATGTTGTGAATATTGATT+TGG | - | chr7.2:33642454-33642473 | MS.gene069005:intron | 20.0% |
| !!! | TTTTTGTTGATTGTAATGTT+GGG | - | chr7.2:33641855-33641874 | MS.gene069005:CDS | 20.0% |
| ! | AACGAGTAAGAAAAAATCAT+TGG | + | chr7.2:33642517-33642536 | None:intergenic | 25.0% |
| ! | ATTTCATCAAATTTGATGTG+GGG | - | chr7.2:33644029-33644048 | MS.gene069005:intron | 25.0% |
| ! | GATTTCATCAAATTTGATGT+GGG | - | chr7.2:33644028-33644047 | MS.gene069005:intron | 25.0% |
| ! | TGATTTCATCAAATTTGATG+TGG | - | chr7.2:33644027-33644046 | MS.gene069005:intron | 25.0% |
| !! | TAGTTTTTCTCATGTATTTC+AGG | - | chr7.2:33643050-33643069 | MS.gene069005:intron | 25.0% |
| AATACTAAACAACTGAACTG+AGG | + | chr7.2:33642828-33642847 | None:intergenic | 30.0% | |
| AATTATTTGTAGATGTGGCT+AGG | - | chr7.2:33642777-33642796 | MS.gene069005:CDS | 30.0% | |
| ACAAAATGATGTCCATACAA+AGG | + | chr7.2:33643148-33643167 | None:intergenic | 30.0% | |
| AGATGTTTACTCTTGTCTTA+AGG | - | chr7.2:33642417-33642436 | MS.gene069005:CDS | 30.0% | |
| ATTTAGATTAGACAGTCAAC+TGG | - | chr7.2:33642253-33642272 | MS.gene069005:intron | 30.0% | |
| CAATCAGAAACAATCAACTA+AGG | + | chr7.2:33641891-33641910 | None:intergenic | 30.0% | |
| GTTTGAAGAAACATTTGAAG+CGG | - | chr7.2:33643079-33643098 | MS.gene069005:intron | 30.0% | |
| TATCAAATTGACAGTCATTG+AGG | - | chr7.2:33644246-33644265 | MS.gene069005:intron | 30.0% | |
| TGCATACAATCTCATTTCAT+TGG | - | chr7.2:33642306-33642325 | MS.gene069005:intron | 30.0% | |
| TTTGTGTGTAATGTTGAATG+TGG | - | chr7.2:33642037-33642056 | MS.gene069005:CDS | 30.0% | |
| ! | AAACTAGATGATGATGATGA+TGG | - | chr7.2:33643802-33643821 | MS.gene069005:intron | 30.0% |
| ! | AAGAAGTGTAATTGTAGTGT+AGG | + | chr7.2:33641791-33641810 | None:intergenic | 30.0% |
| ! | AGAAGTGTAATTGTAGTGTA+GGG | + | chr7.2:33641790-33641809 | None:intergenic | 30.0% |
| ! | TTGTATGCAGTAACTGTTTT+AGG | + | chr7.2:33642295-33642314 | None:intergenic | 30.0% |
| ! | TTTAGAATCACATACCTACT+TGG | + | chr7.2:33643569-33643588 | None:intergenic | 30.0% |
| ! | TTTGTATGGACATCATTTTG+TGG | - | chr7.2:33643147-33643166 | MS.gene069005:intron | 30.0% |
| !! | TAGTTCTAAGCCTGAATAAT+TGG | - | chr7.2:33642648-33642667 | MS.gene069005:intron | 30.0% |
| AAGCTTAAACTGCAAAAGGT+TGG | + | chr7.2:33643867-33643886 | None:intergenic | 35.0% | |
| AATATGCGAGTGGATAACAT+TGG | + | chr7.2:33642165-33642184 | None:intergenic | 35.0% | |
| AATGTCTTCACTATTGGCAA+AGG | - | chr7.2:33644187-33644206 | MS.gene069005:intron | 35.0% | |
| AATTTGATACCTCTGCCTTT+GGG | + | chr7.2:33644235-33644254 | None:intergenic | 35.0% | |
| ACTCTTGTCTTAAGGTTTCA+GGG | - | chr7.2:33642425-33642444 | MS.gene069005:CDS | 35.0% | |
| AGAACTAGTACTAGTAGACA+TGG | + | chr7.2:33642635-33642654 | None:intergenic | 35.0% | |
| AGTAGACACTATAACCAAGT+AGG | - | chr7.2:33643552-33643571 | MS.gene069005:intron | 35.0% | |
| ATGCCATGTCTACTAATTAC+TGG | - | chr7.2:33641972-33641991 | MS.gene069005:CDS | 35.0% | |
| ATGTCTTCACTATTGGCAAA+GGG | - | chr7.2:33644188-33644207 | MS.gene069005:intron | 35.0% | |
| CTATCCTGATCCCTTAATTA+AGG | - | chr7.2:33643961-33643980 | MS.gene069005:intron | 35.0% | |
| CTTATGTTTCAGGCTTTCAT+CGG | - | chr7.2:33642922-33642941 | MS.gene069005:intron | 35.0% | |
| TAATTAAGGGATCAGGATAG+CGG | + | chr7.2:33643961-33643980 | None:intergenic | 35.0% | |
| TACAATCTCATTTCATTGGC+TGG | - | chr7.2:33642310-33642329 | MS.gene069005:intron | 35.0% | |
| TACTCTTGTCTTAAGGTTTC+AGG | - | chr7.2:33642424-33642443 | MS.gene069005:CDS | 35.0% | |
| TAGTGAAGACATTACCCAAT+CGG | + | chr7.2:33644180-33644199 | None:intergenic | 35.0% | |
| TCAAACAGAAAACAGACCAA+CGG | + | chr7.2:33643522-33643541 | None:intergenic | 35.0% | |
| TCAAGATAAGGATCAAAGGA+AGG | + | chr7.2:33643293-33643312 | None:intergenic | 35.0% | |
| TGACACAATCAAACTAGACT+TGG | - | chr7.2:33643988-33644007 | MS.gene069005:intron | 35.0% | |
| TGCAAAGCTTAAACTGCAAA+AGG | + | chr7.2:33643871-33643890 | None:intergenic | 35.0% | |
| TTAGTCTGTTCCTCAAGATA+AGG | + | chr7.2:33643305-33643324 | None:intergenic | 35.0% | |
| TTATCAAGCATCCAATGCTT+TGG | + | chr7.2:33643114-33643133 | None:intergenic | 35.0% | |
| TTCCTCAAGATAAGGATCAA+AGG | + | chr7.2:33643297-33643316 | None:intergenic | 35.0% | |
| TTCCTTTGATCCTTATCTTG+AGG | - | chr7.2:33643292-33643311 | MS.gene069005:intron | 35.0% | |
| TTGGGTAATGTCTTCACTAT+TGG | - | chr7.2:33644181-33644200 | MS.gene069005:intron | 35.0% | |
| TTTGCAGTTTAAGCTTTGCA+AGG | - | chr7.2:33643871-33643890 | MS.gene069005:intron | 35.0% | |
| ! | ACAATCTCATTTCATTGGCT+GGG | - | chr7.2:33642311-33642330 | MS.gene069005:intron | 35.0% |
| ! | GAGTTTGCTTCTTATGTTTC+AGG | - | chr7.2:33642912-33642931 | MS.gene069005:intron | 35.0% |
| ! | GTCTAGTTTGATTGTGTCAT+TGG | + | chr7.2:33643987-33644006 | None:intergenic | 35.0% |
| !! | ACGGAAGTTTTCATTAGTCT+TGG | + | chr7.2:33643657-33643676 | None:intergenic | 35.0% |
| !! | GTGTCATTGGCCTTAATTAA+GGG | + | chr7.2:33643974-33643993 | None:intergenic | 35.0% |
| !! | TGTGTCATTGGCCTTAATTA+AGG | + | chr7.2:33643975-33643994 | None:intergenic | 35.0% |
| !! | TTCTAGTTGATGGCAAAGTT+AGG | - | chr7.2:33643376-33643395 | MS.gene069005:intron | 35.0% |
| !!! | ACATATCCTGCTGGTTTTAT+GGG | - | chr7.2:33643408-33643427 | MS.gene069005:intron | 35.0% |
| !!! | CGGAAGTTTTCATTAGTCTT+GGG | + | chr7.2:33643656-33643675 | None:intergenic | 35.0% |
| AAACTGCAAAAGGTTGGAGA+GGG | + | chr7.2:33643861-33643880 | None:intergenic | 40.0% | |
| AAGAACAGGGAGAAACACAA+AGG | - | chr7.2:33644103-33644122 | MS.gene069005:intron | 40.0% | |
| AAGGTACGATCTGTTCAGTT+TGG | - | chr7.2:33643890-33643909 | MS.gene069005:intron | 40.0% | |
| AATGTTGTTATGGTGACTGG+AGG | - | chr7.2:33644052-33644071 | MS.gene069005:intron | 40.0% | |
| ACGCTGATGTCCAATTATTC+AGG | + | chr7.2:33642661-33642680 | None:intergenic | 40.0% | |
| AGGTACGATCTGTTCAGTTT+GGG | - | chr7.2:33643891-33643910 | MS.gene069005:intron | 40.0% | |
| AGTGAAGACATTACCCAATC+GGG | + | chr7.2:33644179-33644198 | None:intergenic | 40.0% | |
| ATCTGGACCACACAAATCTA+GGG | - | chr7.2:33643263-33643282 | MS.gene069005:intron | 40.0% | |
| CAAATTGACAGTCATTGAGG+AGG | - | chr7.2:33644249-33644268 | MS.gene069005:intron | 40.0% | |
| CAATTTGATACCTCTGCCTT+TGG | + | chr7.2:33644236-33644255 | None:intergenic | 40.0% | |
| CATCTCTTACAGAGTGAAGA+CGG | + | chr7.2:33643706-33643725 | None:intergenic | 40.0% | |
| CATTGGATGCTTGATAAGCT+TGG | - | chr7.2:33643117-33643136 | MS.gene069005:intron | 40.0% | |
| CCATCATAGGTGTTCAGATA+CGG | + | chr7.2:33643929-33643948 | None:intergenic | 40.0% | |
| CCTTTGTGTCATACAGAAGA+CGG | + | chr7.2:33643676-33643695 | None:intergenic | 40.0% | |
| CGTATCTGAACACCTATGAT+GGG | - | chr7.2:33643927-33643946 | MS.gene069005:intron | 40.0% | |
| CGTCTTCTGTATGACACAAA+GGG | - | chr7.2:33643674-33643693 | MS.gene069005:intron | 40.0% | |
| CTACGTCTCTTTCTCAATCT+AGG | - | chr7.2:33642870-33642889 | MS.gene069005:intron | 40.0% | |
| CTAGATTGAGAAAGAGACGT+AGG | + | chr7.2:33642872-33642891 | None:intergenic | 40.0% | |
| CTTTGCCATCAACTAGAACA+TGG | + | chr7.2:33643374-33643393 | None:intergenic | 40.0% | |
| GAGCCAGTAATTAGTAGACA+TGG | + | chr7.2:33641978-33641997 | None:intergenic | 40.0% | |
| TAAACTGCAAAAGGTTGGAG+AGG | + | chr7.2:33643862-33643881 | None:intergenic | 40.0% | |
| TCACTCTGTAAGAGATGATG+AGG | - | chr7.2:33643709-33643728 | MS.gene069005:intron | 40.0% | |
| TCTCATGTATTTCAGGCAAG+AGG | - | chr7.2:33643057-33643076 | MS.gene069005:intron | 40.0% | |
| TGATGTGGGGAATGTTGTTA+TGG | - | chr7.2:33644042-33644061 | MS.gene069005:intron | 40.0% | |
| TGTAAGAGATGATGAGGCAA+AGG | - | chr7.2:33643715-33643734 | MS.gene069005:intron | 40.0% | |
| TGTCTTAAGGTTTCAGGGTT+AGG | - | chr7.2:33642430-33642449 | MS.gene069005:intron | 40.0% | |
| !! | TGTTGGTGTCATCAAGAACA+GGG | - | chr7.2:33644090-33644109 | MS.gene069005:intron | 40.0% |
| !! | TTGGCCTTAATTAAGGGATC+AGG | + | chr7.2:33643968-33643987 | None:intergenic | 40.0% |
| !!! | GACATATCCTGCTGGTTTTA+TGG | - | chr7.2:33643407-33643426 | MS.gene069005:intron | 40.0% |
| !!! | TTTTGAGACCATTCATGTCC+AGG | - | chr7.2:33644129-33644148 | MS.gene069005:intron | 40.0% |
| AACATGGCGTTGCATCAAGA+TGG | + | chr7.2:33643358-33643377 | None:intergenic | 45.0% | |
| ACAGACAAGACATATCCTGC+TGG | - | chr7.2:33643399-33643418 | MS.gene069005:intron | 45.0% | |
| AGTAGCATCCTGGACATGAA+TGG | + | chr7.2:33644140-33644159 | None:intergenic | 45.0% | |
| ATTCATGTCCAGGATGCTAC+TGG | - | chr7.2:33644139-33644158 | MS.gene069005:intron | 45.0% | |
| CAATGCTTGCAATGTTCCGT+TGG | - | chr7.2:33643503-33643522 | MS.gene069005:intron | 45.0% | |
| CATCTGGACCACACAAATCT+AGG | - | chr7.2:33643262-33643281 | MS.gene069005:intron | 45.0% | |
| CATGAGTTTGCAACCCGATT+GGG | - | chr7.2:33644163-33644182 | MS.gene069005:intron | 45.0% | |
| CCGTATCTGAACACCTATGA+TGG | - | chr7.2:33643926-33643945 | MS.gene069005:intron | 45.0% | |
| CCGTCTTCTGTATGACACAA+AGG | - | chr7.2:33643673-33643692 | MS.gene069005:intron | 45.0% | |
| CTGTTCAGTTTGGGCAGAAA+GGG | - | chr7.2:33643900-33643919 | MS.gene069005:intron | 45.0% | |
| GATTTGTGTGGTCCAGATGA+CGG | + | chr7.2:33643261-33643280 | None:intergenic | 45.0% | |
| GCATATTCGCTAATCGCGAT+AGG | - | chr7.2:33642178-33642197 | MS.gene069005:CDS | 45.0% | |
| GGCATTAGACTTGAATCGCA+CGG | - | chr7.2:33643435-33643454 | MS.gene069005:intron | 45.0% | |
| GGGAATGTTGTTATGGTGAC+TGG | - | chr7.2:33644049-33644068 | MS.gene069005:intron | 45.0% | |
| TCATGAGTTTGCAACCCGAT+TGG | - | chr7.2:33644162-33644181 | MS.gene069005:intron | 45.0% | |
| TCTGTTCAGTTTGGGCAGAA+AGG | - | chr7.2:33643899-33643918 | MS.gene069005:intron | 45.0% | |
| TGGATGCTTGATAAGCTTGG+CGG | - | chr7.2:33643120-33643139 | MS.gene069005:intron | 45.0% | |
| TTGTTATGGTGACTGGAGGA+AGG | - | chr7.2:33644056-33644075 | MS.gene069005:intron | 45.0% | |
| ! | CAACGCCATGTTCTAGTTGA+TGG | - | chr7.2:33643366-33643385 | MS.gene069005:intron | 45.0% |
| !! | GTGTTGGTGTCATCAAGAAC+AGG | - | chr7.2:33644089-33644108 | MS.gene069005:intron | 45.0% |
| !!! | CCTGCTGGTTTTATGGGTAT+GGG | - | chr7.2:33643414-33643433 | MS.gene069005:intron | 45.0% |
| !!! | TCCTGCTGGTTTTATGGGTA+TGG | - | chr7.2:33643413-33643432 | MS.gene069005:intron | 45.0% |
| ACTCATGACCAGTAGCATCC+TGG | + | chr7.2:33644150-33644169 | None:intergenic | 50.0% | |
| AGGCACTCCCTAGATTTGTG+TGG | + | chr7.2:33643273-33643292 | None:intergenic | 50.0% | |
| CCCATACCCATAAAACCAGC+AGG | + | chr7.2:33643417-33643436 | None:intergenic | 50.0% | |
| GCGATTAGCGAATATGCGAG+TGG | + | chr7.2:33642175-33642194 | None:intergenic | 50.0% | |
| GGCTCAATGCTCCAAAGCAT+TGG | - | chr7.2:33643100-33643119 | MS.gene069005:intron | 50.0% | |
| TGACAGTCATTGAGGAGGCA+AGG | - | chr7.2:33644254-33644273 | MS.gene069005:intron | 50.0% | |
| TGCAAAAGGTTGGAGAGGGA+GGG | + | chr7.2:33643857-33643876 | None:intergenic | 50.0% | |
| TGGCAAAGGGTCGAAACCTT+GGG | - | chr7.2:33644201-33644220 | MS.gene069005:intron | 50.0% | |
| TTGGCAAAGGGTCGAAACCT+TGG | - | chr7.2:33644200-33644219 | MS.gene069005:intron | 50.0% | |
| !! | TAAGGGATCAGGATAGCGGA+TGG | + | chr7.2:33643957-33643976 | None:intergenic | 50.0% |
| AGCTTGGCGGTGCCTTTGTA+TGG | - | chr7.2:33643133-33643152 | MS.gene069005:intron | 55.0% | |
| CCTTGGGTGTCTCTTCCCAA+AGG | - | chr7.2:33644217-33644236 | MS.gene069005:intron | 55.0% | |
| CTGCAAAAGGTTGGAGAGGG+AGG | + | chr7.2:33643858-33643877 | None:intergenic | 55.0% | |
| GATGGCTGCTTCTCAACAGG+TGG | - | chr7.2:33644282-33644301 | MS.gene069005:intron | 55.0% | |
| GCAGATGGCTGCTTCTCAAC+AGG | - | chr7.2:33644279-33644298 | MS.gene069005:intron | 55.0% | |
| GGAAGGAACAGAGGTCGTGT+TGG | - | chr7.2:33644073-33644092 | MS.gene069005:intron | 55.0% | |
| GTGACTGGAGGAAGGAACAG+AGG | - | chr7.2:33644064-33644083 | MS.gene069005:intron | 55.0% | |
| GTGTCTCTTCCCAAAGGCAG+AGG | - | chr7.2:33644223-33644242 | MS.gene069005:intron | 55.0% | |
| TGAGGAGGCAAGGAAGCAGA+TGG | - | chr7.2:33644264-33644283 | MS.gene069005:intron | 55.0% | |
| ! | CCTTTGGGAAGAGACACCCA+AGG | + | chr7.2:33644220-33644239 | None:intergenic | 55.0% |
| ! | GTGGTCCAGATGACGGCTTT+GGG | + | chr7.2:33643254-33643273 | None:intergenic | 55.0% |
| ! | TGGTCCAGATGACGGCTTTG+GGG | + | chr7.2:33643253-33643272 | None:intergenic | 55.0% |
| ! | TGTGGTCCAGATGACGGCTT+TGG | + | chr7.2:33643255-33643274 | None:intergenic | 55.0% |
| TAGGCCCCAAAGCCGTCATC+TGG | - | chr7.2:33643246-33643265 | MS.gene069005:intron | 60.0% | |
| GCGGATGGTGCGCCCATCAT+AGG | + | chr7.2:33643942-33643961 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 33641772 | 33644315 | 33641772 | ID=MS.gene069005 |
| chr7.2 | mRNA | 33641772 | 33644315 | 33641772 | ID=MS.gene069005.t1;Parent=MS.gene069005 |
| chr7.2 | exon | 33644313 | 33644315 | 33644313 | ID=MS.gene069005.t1.exon1;Parent=MS.gene069005.t1 |
| chr7.2 | CDS | 33644313 | 33644315 | 33644313 | ID=cds.MS.gene069005.t1;Parent=MS.gene069005.t1 |
| chr7.2 | exon | 33642938 | 33643015 | 33642938 | ID=MS.gene069005.t1.exon2;Parent=MS.gene069005.t1 |
| chr7.2 | CDS | 33642938 | 33643015 | 33642938 | ID=cds.MS.gene069005.t1;Parent=MS.gene069005.t1 |
| chr7.2 | exon | 33642658 | 33642838 | 33642658 | ID=MS.gene069005.t1.exon3;Parent=MS.gene069005.t1 |
| chr7.2 | CDS | 33642658 | 33642838 | 33642658 | ID=cds.MS.gene069005.t1;Parent=MS.gene069005.t1 |
| chr7.2 | exon | 33642351 | 33642448 | 33642351 | ID=MS.gene069005.t1.exon4;Parent=MS.gene069005.t1 |
| chr7.2 | CDS | 33642351 | 33642448 | 33642351 | ID=cds.MS.gene069005.t1;Parent=MS.gene069005.t1 |
| chr7.2 | exon | 33641772 | 33642209 | 33641772 | ID=MS.gene069005.t1.exon5;Parent=MS.gene069005.t1 |
| chr7.2 | CDS | 33641772 | 33642209 | 33641772 | ID=cds.MS.gene069005.t1;Parent=MS.gene069005.t1 |
| Gene Sequence |
| Protein sequence |
