Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07981.t1 | XP_013451955.1 | 95.6 | 159 | 7 | 0 | 1 | 159 | 552 | 710 | 7.90E-73 | 283.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07981.t1 | Q94BU1 | 48.8 | 160 | 73 | 3 | 1 | 159 | 541 | 692 | 7.1e-30 | 131.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07981.t1 | A0A072UA79 | 95.6 | 159 | 7 | 0 | 1 | 159 | 552 | 710 | 5.7e-73 | 283.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049427 | MS.gene07981 | 0.805789 | 1.13E-49 | -1.69E-46 |
| MS.gene050426 | MS.gene07981 | -0.800143 | 1.65E-48 | -1.69E-46 |
| MS.gene050670 | MS.gene07981 | 0.830293 | 3.19E-55 | -1.69E-46 |
| MS.gene050812 | MS.gene07981 | 0.804091 | 2.55E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene07981 | 0.803343 | 3.65E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene07981 | 0.829621 | 4.65E-55 | -1.69E-46 |
| MS.gene051525 | MS.gene07981 | 0.806354 | 8.57E-50 | -1.69E-46 |
| MS.gene052134 | MS.gene07981 | 0.823565 | 1.29E-53 | -1.69E-46 |
| MS.gene052135 | MS.gene07981 | 0.826241 | 3.02E-54 | -1.69E-46 |
| MS.gene052136 | MS.gene07981 | 0.831207 | 1.90E-55 | -1.69E-46 |
| MS.gene052253 | MS.gene07981 | 0.835721 | 1.42E-56 | -1.69E-46 |
| MS.gene052322 | MS.gene07981 | 0.802715 | 4.92E-49 | -1.69E-46 |
| MS.gene052346 | MS.gene07981 | 0.803866 | 2.84E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene07981 | 0.840768 | 7.13E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene07981 | 0.80095 | 1.13E-48 | -1.69E-46 |
| MS.gene052481 | MS.gene07981 | 0.824911 | 6.24E-54 | -1.69E-46 |
| MS.gene052485 | MS.gene07981 | 0.807683 | 4.48E-50 | -1.69E-46 |
| MS.gene052501 | MS.gene07981 | 0.807598 | 4.67E-50 | -1.69E-46 |
| MS.gene052505 | MS.gene07981 | 0.814128 | 1.80E-51 | -1.69E-46 |
| MS.gene052982 | MS.gene07981 | 0.82317 | 1.60E-53 | -1.69E-46 |
| MS.gene055116 | MS.gene07981 | 0.823594 | 1.27E-53 | -1.69E-46 |
| MS.gene055289 | MS.gene07981 | 0.807635 | 4.59E-50 | -1.69E-46 |
| MS.gene055369 | MS.gene07981 | 0.814054 | 1.87E-51 | -1.69E-46 |
| MS.gene055539 | MS.gene07981 | 0.817775 | 2.77E-52 | -1.69E-46 |
| MS.gene055741 | MS.gene07981 | 0.814133 | 1.80E-51 | -1.69E-46 |
| MS.gene055744 | MS.gene07981 | 0.817396 | 3.37E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene07981 | 0.812243 | 4.68E-51 | -1.69E-46 |
| MS.gene05666 | MS.gene07981 | 0.809201 | 2.13E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene07981 | 0.818953 | 1.50E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene07981 | 0.819551 | 1.09E-52 | -1.69E-46 |
| MS.gene058007 | MS.gene07981 | 0.837472 | 5.09E-57 | -1.69E-46 |
| MS.gene058376 | MS.gene07981 | 0.840989 | 6.24E-58 | -1.69E-46 |
| MS.gene058444 | MS.gene07981 | 0.806456 | 8.15E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene07981 | 0.821945 | 3.08E-53 | -1.69E-46 |
| MS.gene058948 | MS.gene07981 | 0.805372 | 1.38E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene07981 | 0.802442 | 5.60E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene07981 | 0.805401 | 1.36E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene07981 | 0.835727 | 1.42E-56 | -1.69E-46 |
| MS.gene059692 | MS.gene07981 | 0.810839 | 9.44E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene07981 | 0.812041 | 5.18E-51 | -1.69E-46 |
| MS.gene060403 | MS.gene07981 | 0.818472 | 1.93E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene07981 | 0.806311 | 8.75E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene07981 | 0.843818 | 1.11E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07981.t1 | MTR_6g038750 | 95.597 | 159 | 7 | 0 | 1 | 159 | 552 | 710 | 5.00e-100 | 302 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07981.t1 | AT1G71810 | 48.750 | 160 | 73 | 3 | 1 | 159 | 541 | 692 | 1.63e-38 | 138 |
Find 39 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATCTTCTTCGGTCATTAA+AGG | 0.214414 | 6.3:+32195907 | None:intergenic |
| CGCCTTATGCTATTACTATC+AGG | 0.254646 | 6.3:-32195862 | MS.gene07981:CDS |
| TGCACTTGGGCTTGCTTCCT+TGG | 0.320437 | 6.3:-32195974 | MS.gene07981:CDS |
| CCGAGTACAGTATTTGATTC+TGG | 0.326284 | 6.3:+32194997 | None:intergenic |
| AATAATTGCTGCTGGGATTC+CGG | 0.357575 | 6.3:+32194762 | None:intergenic |
| TAAGTTGACAATATCTTCTT+CGG | 0.390382 | 6.3:+32195897 | None:intergenic |
| ATTTCAATTGCCAGCTAACT+TGG | 0.391080 | 6.3:-32194742 | MS.gene07981:CDS |
| AAGAAGATATTGTCAACTTA+AGG | 0.428840 | 6.3:-32195894 | MS.gene07981:CDS |
| CTGCTGCGAGAACTATCAAA+AGG | 0.443736 | 6.3:-32194698 | MS.gene07981:CDS |
| TTTCTGTTAGTGTAAAAGAA+AGG | 0.455354 | 6.3:+32196341 | None:intergenic |
| AACTGTTGAACCAAGTTAGC+TGG | 0.464113 | 6.3:+32194732 | None:intergenic |
| GCAATTGAAATAATTGCTGC+TGG | 0.469883 | 6.3:+32194754 | None:intergenic |
| TACAGTATTTGATTCTGGTC+GGG | 0.473562 | 6.3:+32195002 | None:intergenic |
| AACAGGAAGAATGTCTTGAA+TGG | 0.494577 | 6.3:+32194941 | None:intergenic |
| TCAGGAATGACGGAAAGAAC+AGG | 0.508934 | 6.3:+32194924 | None:intergenic |
| GATAGTTCTCGCAGCAGCGC+GGG | 0.517491 | 6.3:+32194704 | None:intergenic |
| TCTTGCAGCAGCTGTTTCCA+AGG | 0.528924 | 6.3:+32195957 | None:intergenic |
| CCCCTGATAGTAATAGCATA+AGG | 0.543212 | 6.3:+32195860 | None:intergenic |
| ATGTAGGGTTTAGATGCACT+TGG | 0.550374 | 6.3:-32195988 | MS.gene07981:intron |
| CCAGAATCAAATACTGTACT+CGG | 0.551398 | 6.3:-32194997 | MS.gene07981:CDS |
| GCCTTATGCTATTACTATCA+GGG | 0.556826 | 6.3:-32195861 | MS.gene07981:CDS |
| AGATTCGAAAATGGTTATGA+AGG | 0.557498 | 6.3:-32196368 | None:intergenic |
| TATATTTACCTCAGGAATGA+CGG | 0.557901 | 6.3:+32194914 | None:intergenic |
| ATGTAAATTTCAGCTCCTAC+CGG | 0.564826 | 6.3:-32194781 | MS.gene07981:intron |
| ATAGTAATAGCATAAGGCGT+TGG | 0.567548 | 6.3:+32195866 | None:intergenic |
| GTACAGTATTTGATTCTGGT+CGG | 0.577930 | 6.3:+32195001 | None:intergenic |
| TGTTCTTTCCGTCATTCCTG+AGG | 0.588868 | 6.3:-32194922 | MS.gene07981:intron |
| CAATTGAAATAATTGCTGCT+GGG | 0.591793 | 6.3:+32194755 | None:intergenic |
| TGCTGCGAGAACTATCAAAA+GGG | 0.593150 | 6.3:-32194697 | MS.gene07981:CDS |
| TGTAGGGTTTAGATGCACTT+GGG | 0.596142 | 6.3:-32195987 | MS.gene07981:intron |
| TAATAGCATAAGGCGTTGGA+AGG | 0.598040 | 6.3:+32195870 | None:intergenic |
| GAAAAGAAGAAGTTACTGAA+AGG | 0.608276 | 6.3:+32195931 | None:intergenic |
| TGTCTTATAGGGAGAGGCAA+AGG | 0.610421 | 6.3:-32195030 | MS.gene07981:intron |
| AATTGTTCAAGAATTTGCCA+AGG | 0.611754 | 6.3:-32196203 | MS.gene07981:intron |
| ATTGCTGCTGGGATTCCGGT+AGG | 0.637646 | 6.3:+32194766 | None:intergenic |
| TGTTGCAGGGTGGATTTGTG+AGG | 0.637741 | 6.3:-32196231 | MS.gene07981:intron |
| CCTTATGCTATTACTATCAG+GGG | 0.647224 | 6.3:-32195860 | MS.gene07981:CDS |
| TGATAGTTCTCGCAGCAGCG+CGG | 0.673188 | 6.3:+32194703 | None:intergenic |
| GAATCAAATACTGTACTCGG+AGG | 0.741867 | 6.3:-32194994 | MS.gene07981:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATTGATTTTTCTTTT+AGG | - | chr6.3:32195291-32195310 | MS.gene07981:intron | 15.0% |
| !! | ATTAAACTAATAGTCTACAA+TGG | + | chr6.3:32194923-32194942 | None:intergenic | 20.0% |
| !! | TATGAAAATGAAACGATAAT+TGG | - | chr6.3:32195943-32195962 | MS.gene07981:CDS | 20.0% |
| !!! | AAAAGCATCTAAATTGTTAA+TGG | + | chr6.3:32194745-32194764 | None:intergenic | 20.0% |
| !!! | AAAGCATCTAAATTGTTAAT+GGG | + | chr6.3:32194744-32194763 | None:intergenic | 20.0% |
| ! | AAGAAGATATTGTCAACTTA+AGG | - | chr6.3:32195150-32195169 | MS.gene07981:intron | 25.0% |
| ! | AAGCATCTAAATTGTTAATG+GGG | + | chr6.3:32194743-32194762 | None:intergenic | 25.0% |
| ! | AGATTAGAAATGAAGAAAGA+AGG | + | chr6.3:32194994-32195013 | None:intergenic | 25.0% |
| ! | AGTTTACATTATGATTGTAG+TGG | + | chr6.3:32195740-32195759 | None:intergenic | 25.0% |
| ! | ATCATGTAAGTACCATATTT+CGG | + | chr6.3:32195320-32195339 | None:intergenic | 25.0% |
| ! | TATCATGAAAACAAATACCT+TGG | + | chr6.3:32194861-32194880 | None:intergenic | 25.0% |
| ! | TTTCTGTTAGTGTAAAAGAA+AGG | + | chr6.3:32194706-32194725 | None:intergenic | 25.0% |
| !! | TAAGTTGACAATATCTTCTT+CGG | + | chr6.3:32195150-32195169 | None:intergenic | 25.0% |
| !! | TTCTTTTACACTAACAGAAA+AGG | - | chr6.3:32194706-32194725 | MS.gene07981:CDS | 25.0% |
| !!! | TACGATTTTTCCTTTGTTTT+GGG | + | chr6.3:32195682-32195701 | None:intergenic | 25.0% |
| !!! | TTACGATTTTTCCTTTGTTT+TGG | + | chr6.3:32195683-32195702 | None:intergenic | 25.0% |
| AATTGTTCAAGAATTTGCCA+AGG | - | chr6.3:32194841-32194860 | MS.gene07981:intron | 30.0% | |
| ATACTCAAACACATTGCAAT+GGG | + | chr6.3:32195880-32195899 | None:intergenic | 30.0% | |
| ATATCTTCTTCGGTCATTAA+AGG | + | chr6.3:32195140-32195159 | None:intergenic | 30.0% | |
| CAAATGCTTATATTTACCTC+AGG | + | chr6.3:32196141-32196160 | None:intergenic | 30.0% | |
| CAATTGAAATAATTGCTGCT+GGG | + | chr6.3:32196292-32196311 | None:intergenic | 30.0% | |
| CTTTCATGATAATTGTTGCA+GGG | - | chr6.3:32194800-32194819 | MS.gene07981:intron | 30.0% | |
| GAAAAGAAGAAGTTACTGAA+AGG | + | chr6.3:32195116-32195135 | None:intergenic | 30.0% | |
| TATAATATATGACGCTCAGT+GGG | + | chr6.3:32195643-32195662 | None:intergenic | 30.0% | |
| TATATTTACCTCAGGAATGA+CGG | + | chr6.3:32196133-32196152 | None:intergenic | 30.0% | |
| TCACATAATCAGGAGAATAA+AGG | + | chr6.3:32195575-32195594 | None:intergenic | 30.0% | |
| TCATGAAAGACATGTTAGAA+AGG | + | chr6.3:32194789-32194808 | None:intergenic | 30.0% | |
| TCATGTAAGTACCATATTTC+GGG | + | chr6.3:32195319-32195338 | None:intergenic | 30.0% | |
| TCTTTCATGATAATTGTTGC+AGG | - | chr6.3:32194799-32194818 | MS.gene07981:intron | 30.0% | |
| TTAATCCTTTCACCTTCATT+AGG | - | chr6.3:32194967-32194986 | MS.gene07981:CDS | 30.0% | |
| ! | CTAACTTTTACCCAAAACAA+AGG | - | chr6.3:32195669-32195688 | MS.gene07981:intron | 30.0% |
| !! | TGTAAACTTCTAAAGCTTCT+AGG | - | chr6.3:32195752-32195771 | MS.gene07981:intron | 30.0% |
| AACAGGAAGAATGTCTTGAA+TGG | + | chr6.3:32196106-32196125 | None:intergenic | 35.0% | |
| AAGAAAGAAGGACCTAATGA+AGG | + | chr6.3:32194982-32195001 | None:intergenic | 35.0% | |
| ACTTTCCGTCAATGTCTTAT+AGG | - | chr6.3:32196002-32196021 | MS.gene07981:intron | 35.0% | |
| AGATATGCACTCACATAATC+AGG | + | chr6.3:32195585-32195604 | None:intergenic | 35.0% | |
| ATAGTAATAGCATAAGGCGT+TGG | + | chr6.3:32195181-32195200 | None:intergenic | 35.0% | |
| ATGTAAATTTCAGCTCCTAC+CGG | - | chr6.3:32196263-32196282 | MS.gene07981:intron | 35.0% | |
| ATGTAAGTACCATATTTCGG+GGG | + | chr6.3:32195317-32195336 | None:intergenic | 35.0% | |
| ATTTCAATTGCCAGCTAACT+TGG | - | chr6.3:32196302-32196321 | MS.gene07981:intron | 35.0% | |
| CATGTAAGTACCATATTTCG+GGG | + | chr6.3:32195318-32195337 | None:intergenic | 35.0% | |
| CCAGAATCAAATACTGTACT+CGG | - | chr6.3:32196047-32196066 | MS.gene07981:intron | 35.0% | |
| CCTTATGCTATTACTATCAG+GGG | - | chr6.3:32195184-32195203 | MS.gene07981:intron | 35.0% | |
| CGACTGTAGTAGTATAATAG+TGG | - | chr6.3:32195900-32195919 | MS.gene07981:CDS | 35.0% | |
| CTTTCCGTCAATGTCTTATA+GGG | - | chr6.3:32196003-32196022 | MS.gene07981:intron | 35.0% | |
| GAAAGGCAGTAAAAACTTCA+GGG | - | chr6.3:32195774-32195793 | MS.gene07981:intron | 35.0% | |
| GATACTCAAACACATTGCAA+TGG | + | chr6.3:32195881-32195900 | None:intergenic | 35.0% | |
| GCAATTGAAATAATTGCTGC+TGG | + | chr6.3:32196293-32196312 | None:intergenic | 35.0% | |
| GCCTTATGCTATTACTATCA+GGG | - | chr6.3:32195183-32195202 | MS.gene07981:intron | 35.0% | |
| GTACAGTATTTGATTCTGGT+CGG | + | chr6.3:32196046-32196065 | None:intergenic | 35.0% | |
| GTATAATATATGACGCTCAG+TGG | + | chr6.3:32195644-32195663 | None:intergenic | 35.0% | |
| GTCATAAGCAATTTCACATC+TGG | - | chr6.3:32196207-32196226 | MS.gene07981:CDS | 35.0% | |
| TAAAGTCTTTGTCATGCTTC+CGG | - | chr6.3:32194879-32194898 | MS.gene07981:intron | 35.0% | |
| TACAGTATTTGATTCTGGTC+GGG | + | chr6.3:32196045-32196064 | None:intergenic | 35.0% | |
| TACTCAAACACATTGCAATG+GGG | + | chr6.3:32195879-32195898 | None:intergenic | 35.0% | |
| TGTAGTAGTATAATAGTGGC+TGG | - | chr6.3:32195904-32195923 | MS.gene07981:CDS | 35.0% | |
| TTGCTTTCGATCCAAATGTA+GGG | - | chr6.3:32195041-32195060 | MS.gene07981:intron | 35.0% | |
| TTTATCCATGGTGATTTCCA+TGG | + | chr6.3:32195371-32195390 | None:intergenic | 35.0% | |
| TTTGCTTTCGATCCAAATGT+AGG | - | chr6.3:32195040-32195059 | MS.gene07981:intron | 35.0% | |
| ! | ATCGAAGTCTTCTTTTCTTC+TGG | + | chr6.3:32195210-32195229 | None:intergenic | 35.0% |
| !! | AAGCAAATTTTAACGCTCAG+AGG | + | chr6.3:32195027-32195046 | None:intergenic | 35.0% |
| !! | ACTTCTAAAGCTTCTAGGAA+AGG | - | chr6.3:32195757-32195776 | MS.gene07981:intron | 35.0% |
| !! | AGCAAATTTTAACGCTCAGA+GGG | + | chr6.3:32195026-32195045 | None:intergenic | 35.0% |
| AACTGTTGAACCAAGTTAGC+TGG | + | chr6.3:32196315-32196334 | None:intergenic | 40.0% | |
| AAGGACCTAATGAAGGTGAA+AGG | + | chr6.3:32194975-32194994 | None:intergenic | 40.0% | |
| AATAATTGCTGCTGGGATTC+CGG | + | chr6.3:32196285-32196304 | None:intergenic | 40.0% | |
| ATGTAGGGTTTAGATGCACT+TGG | - | chr6.3:32195056-32195075 | MS.gene07981:intron | 40.0% | |
| CCCCTGATAGTAATAGCATA+AGG | + | chr6.3:32195187-32195206 | None:intergenic | 40.0% | |
| CCGAGTACAGTATTTGATTC+TGG | + | chr6.3:32196050-32196069 | None:intergenic | 40.0% | |
| CGCCTTATGCTATTACTATC+AGG | - | chr6.3:32195182-32195201 | MS.gene07981:intron | 40.0% | |
| CTCTCCCTATAAGACATTGA+CGG | + | chr6.3:32196010-32196029 | None:intergenic | 40.0% | |
| GAATCAAATACTGTACTCGG+AGG | - | chr6.3:32196050-32196069 | MS.gene07981:intron | 40.0% | |
| GGAAAGGCAGTAAAAACTTC+AGG | - | chr6.3:32195773-32195792 | MS.gene07981:intron | 40.0% | |
| GGATAAAGCTTGAAGCTCTA+AGG | - | chr6.3:32195384-32195403 | MS.gene07981:intron | 40.0% | |
| GTGCATCTAAACCCTACATT+TGG | + | chr6.3:32195055-32195074 | None:intergenic | 40.0% | |
| TCATGATAATTGTTGCAGGG+TGG | - | chr6.3:32194803-32194822 | MS.gene07981:intron | 40.0% | |
| TGCTGCGAGAACTATCAAAA+GGG | - | chr6.3:32196347-32196366 | MS.gene07981:CDS | 40.0% | |
| TGTAGGGTTTAGATGCACTT+GGG | - | chr6.3:32195057-32195076 | MS.gene07981:intron | 40.0% | |
| ! | AGAGCTTCAAGCTTTATCCA+TGG | + | chr6.3:32195383-32195402 | None:intergenic | 40.0% |
| ! | CGTTGATGAATGAGTTTCCA+CGG | - | chr6.3:32195809-32195828 | MS.gene07981:intron | 40.0% |
| !! | AGCTGTTTTGTCAGTGTTAG+TGG | + | chr6.3:32196185-32196204 | None:intergenic | 40.0% |
| !! | GCAAATTTTAACGCTCAGAG+GGG | + | chr6.3:32195025-32195044 | None:intergenic | 40.0% |
| !! | TAATAGCATAAGGCGTTGGA+AGG | + | chr6.3:32195177-32195196 | None:intergenic | 40.0% |
| !! | TTCTAAGATTGAAACCGCCA+TGG | - | chr6.3:32195351-32195370 | MS.gene07981:intron | 40.0% |
| ACAATGGCCTAGAATGCATG+AGG | + | chr6.3:32194907-32194926 | None:intergenic | 45.0% | |
| ATCCATGGTGATTTCCATGG+CGG | + | chr6.3:32195368-32195387 | None:intergenic | 45.0% | |
| CAATGTAGCAATGTAGTCCG+TGG | + | chr6.3:32195829-32195848 | None:intergenic | 45.0% | |
| CGTCAATGTCTTATAGGGAG+AGG | - | chr6.3:32196008-32196027 | MS.gene07981:intron | 45.0% | |
| CTGCTGCGAGAACTATCAAA+AGG | - | chr6.3:32196346-32196365 | MS.gene07981:CDS | 45.0% | |
| TGGGCATTCACACGTATTAG+AGG | + | chr6.3:32195624-32195643 | None:intergenic | 45.0% | |
| TGTCTTATAGGGAGAGGCAA+AGG | - | chr6.3:32196014-32196033 | MS.gene07981:intron | 45.0% | |
| TGTTCTTTCCGTCATTCCTG+AGG | - | chr6.3:32196122-32196141 | MS.gene07981:intron | 45.0% | |
| ! | TCAGGAATGACGGAAAGAAC+AGG | + | chr6.3:32196123-32196142 | None:intergenic | 45.0% |
| ! | TCTTTTAGGCCCCCGAAATA+TGG | - | chr6.3:32195305-32195324 | MS.gene07981:intron | 45.0% |
| AACCGCCATGGAAATCACCA+TGG | - | chr6.3:32195363-32195382 | MS.gene07981:intron | 50.0% | |
| ! | TCTTGCAGCAGCTGTTTCCA+AGG | + | chr6.3:32195090-32195109 | None:intergenic | 50.0% |
| ! | TGTTGCAGGGTGGATTTGTG+AGG | - | chr6.3:32194813-32194832 | MS.gene07981:intron | 50.0% |
| ATTGCTGCTGGGATTCCGGT+AGG | + | chr6.3:32196281-32196300 | None:intergenic | 55.0% | |
| CTACATTGCGTAGTGCGCGT+AGG | - | chr6.3:32195841-32195860 | MS.gene07981:CDS | 55.0% | |
| GCCTAGAATGCATGAGGTGC+CGG | + | chr6.3:32194901-32194920 | None:intergenic | 55.0% | |
| TCCGGCACCTCATGCATTCT+AGG | - | chr6.3:32194897-32194916 | MS.gene07981:intron | 55.0% | |
| TGATAGTTCTCGCAGCAGCG+CGG | + | chr6.3:32196344-32196363 | None:intergenic | 55.0% | |
| ! | TGCACTTGGGCTTGCTTCCT+TGG | - | chr6.3:32195070-32195089 | MS.gene07981:intron | 55.0% |
| GATAGTTCTCGCAGCAGCGC+GGG | + | chr6.3:32196343-32196362 | None:intergenic | 60.0% | |
| GCGTAGTGCGCGTAGGTGCT+AGG | - | chr6.3:32195848-32195867 | MS.gene07981:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 32194686 | 32196380 | 32194686 | ID=MS.gene07981 |
| chr6.3 | mRNA | 32194686 | 32196380 | 32194686 | ID=MS.gene07981.t1;Parent=MS.gene07981 |
| chr6.3 | exon | 32196339 | 32196380 | 32196339 | ID=MS.gene07981.t1.exon1;Parent=MS.gene07981.t1 |
| chr6.3 | CDS | 32196339 | 32196380 | 32196339 | ID=cds.MS.gene07981.t1;Parent=MS.gene07981.t1 |
| chr6.3 | exon | 32196204 | 32196245 | 32196204 | ID=MS.gene07981.t1.exon2;Parent=MS.gene07981.t1 |
| chr6.3 | CDS | 32196204 | 32196245 | 32196204 | ID=cds.MS.gene07981.t1;Parent=MS.gene07981.t1 |
| chr6.3 | exon | 32195834 | 32196004 | 32195834 | ID=MS.gene07981.t1.exon3;Parent=MS.gene07981.t1 |
| chr6.3 | CDS | 32195834 | 32196004 | 32195834 | ID=cds.MS.gene07981.t1;Parent=MS.gene07981.t1 |
| chr6.3 | exon | 32194923 | 32195042 | 32194923 | ID=MS.gene07981.t1.exon4;Parent=MS.gene07981.t1 |
| chr6.3 | CDS | 32194923 | 32195042 | 32194923 | ID=cds.MS.gene07981.t1;Parent=MS.gene07981.t1 |
| chr6.3 | exon | 32194686 | 32194790 | 32194686 | ID=MS.gene07981.t1.exon5;Parent=MS.gene07981.t1 |
| chr6.3 | CDS | 32194686 | 32194790 | 32194686 | ID=cds.MS.gene07981.t1;Parent=MS.gene07981.t1 |
| Gene Sequence |
| Protein sequence |
