Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09224.t1 | XP_013446582.1 | 98.2 | 970 | 17 | 0 | 1 | 970 | 1 | 970 | 0.00E+00 | 1880.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09224.t1 | Q9C5U1 | 68.4 | 982 | 285 | 7 | 1 | 969 | 61 | 1030 | 0.0e+00 | 1301.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09224.t1 | A0A072TSW4 | 98.2 | 970 | 17 | 0 | 1 | 970 | 1 | 970 | 0.0e+00 | 1880.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene09224.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene09224 | 0.820446 | 6.83E-53 | -1.69E-46 |
| MS.gene049368 | MS.gene09224 | 0.825798 | 3.85E-54 | -1.69E-46 |
| MS.gene049411 | MS.gene09224 | 0.805887 | 1.07E-49 | -1.69E-46 |
| MS.gene049499 | MS.gene09224 | 0.815456 | 9.16E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene09224 | 0.812975 | 3.24E-51 | -1.69E-46 |
| MS.gene050384 | MS.gene09224 | 0.821534 | 3.84E-53 | -1.69E-46 |
| MS.gene050386 | MS.gene09224 | 0.804537 | 2.06E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene09224 | 0.83986 | 1.23E-57 | -1.69E-46 |
| MS.gene050646 | MS.gene09224 | 0.817515 | 3.17E-52 | -1.69E-46 |
| MS.gene050689 | MS.gene09224 | 0.812935 | 3.30E-51 | -1.69E-46 |
| MS.gene050945 | MS.gene09224 | 0.810728 | 9.98E-51 | -1.69E-46 |
| MS.gene051234 | MS.gene09224 | 0.82343 | 1.39E-53 | -1.69E-46 |
| MS.gene051381 | MS.gene09224 | 0.813497 | 2.48E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene09224 | 0.856912 | 2.33E-62 | -1.69E-46 |
| MS.gene052307 | MS.gene09224 | 0.830412 | 2.98E-55 | -1.69E-46 |
| MS.gene052463 | MS.gene09224 | 0.811681 | 6.20E-51 | -1.69E-46 |
| MS.gene052514 | MS.gene09224 | 0.825126 | 5.56E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene09224 | 0.807574 | 4.73E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene09224 | 0.825886 | 3.67E-54 | -1.69E-46 |
| MS.gene053079 | MS.gene09224 | 0.80109 | 1.06E-48 | -1.69E-46 |
| MS.gene053143 | MS.gene09224 | 0.803799 | 2.93E-49 | -1.69E-46 |
| MS.gene053272 | MS.gene09224 | -0.826475 | 2.66E-54 | -1.69E-46 |
| MS.gene053427 | MS.gene09224 | 0.801905 | 7.22E-49 | -1.69E-46 |
| MS.gene053541 | MS.gene09224 | 0.818753 | 1.66E-52 | -1.69E-46 |
| MS.gene053542 | MS.gene09224 | 0.825471 | 4.60E-54 | -1.69E-46 |
| MS.gene054004 | MS.gene09224 | 0.812155 | 4.89E-51 | -1.69E-46 |
| MS.gene054178 | MS.gene09224 | 0.80621 | 9.19E-50 | -1.69E-46 |
| MS.gene05458 | MS.gene09224 | 0.81643 | 5.55E-52 | -1.69E-46 |
| MS.gene055221 | MS.gene09224 | 0.809306 | 2.02E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene09224 | 0.818164 | 2.26E-52 | -1.69E-46 |
| MS.gene056519 | MS.gene09224 | 0.805881 | 1.08E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene09224 | 0.849341 | 3.44E-60 | -1.69E-46 |
| MS.gene057102 | MS.gene09224 | 0.812302 | 4.54E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene09224 | 0.821298 | 4.35E-53 | -1.69E-46 |
| MS.gene058149 | MS.gene09224 | 0.853337 | 2.55E-61 | -1.69E-46 |
| MS.gene058292 | MS.gene09224 | 0.803159 | 3.98E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene09224 | 0.82668 | 2.38E-54 | -1.69E-46 |
| MS.gene059146 | MS.gene09224 | 0.819898 | 9.12E-53 | -1.69E-46 |
| MS.gene059778 | MS.gene09224 | 0.838476 | 2.81E-57 | -1.69E-46 |
| MS.gene060343 | MS.gene09224 | -0.814718 | 1.34E-51 | -1.69E-46 |
| MS.gene060933 | MS.gene09224 | 0.834405 | 3.05E-56 | -1.69E-46 |
| MS.gene060935 | MS.gene09224 | 0.843044 | 1.78E-58 | -1.69E-46 |
| MS.gene060937 | MS.gene09224 | 0.855621 | 5.58E-62 | -1.69E-46 |
| MS.gene061100 | MS.gene09224 | 0.841327 | 5.08E-58 | -1.69E-46 |
| MS.gene061160 | MS.gene09224 | 0.813447 | 2.55E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene059778 | MS.gene09224 | PPI |
| MS.gene58351 | MS.gene09224 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09224.t1 | MTR_8g080770 | 98.247 | 970 | 17 | 0 | 1 | 970 | 1 | 970 | 0.0 | 1984 |
| MS.gene09224.t1 | MTR_8g080770 | 98.023 | 860 | 17 | 0 | 111 | 970 | 2 | 861 | 0.0 | 1748 |
| MS.gene09224.t1 | MTR_3g085130 | 80.306 | 980 | 182 | 5 | 1 | 970 | 56 | 1034 | 0.0 | 1611 |
| MS.gene09224.t1 | MTR_3g085130 | 79.394 | 825 | 159 | 5 | 156 | 970 | 1 | 824 | 0.0 | 1333 |
| MS.gene09224.t1 | MTR_5g097410 | 53.683 | 991 | 397 | 14 | 18 | 967 | 243 | 1212 | 0.0 | 1035 |
| MS.gene09224.t1 | MTR_8g106150 | 52.563 | 995 | 395 | 18 | 21 | 967 | 29 | 994 | 0.0 | 976 |
| MS.gene09224.t1 | MTR_8g106150 | 52.128 | 752 | 304 | 15 | 263 | 967 | 9 | 751 | 0.0 | 713 |
| MS.gene09224.t1 | MTR_2g067240 | 52.063 | 315 | 89 | 4 | 201 | 513 | 1 | 255 | 3.98e-94 | 298 |
| MS.gene09224.t1 | MTR_3g105590 | 36.957 | 276 | 163 | 4 | 395 | 661 | 373 | 646 | 5.23e-40 | 160 |
| MS.gene09224.t1 | MTR_5g022470 | 33.750 | 320 | 188 | 6 | 345 | 657 | 462 | 764 | 2.42e-38 | 155 |
| MS.gene09224.t1 | MTR_5g022470 | 33.750 | 320 | 188 | 6 | 345 | 657 | 462 | 764 | 2.81e-38 | 155 |
| MS.gene09224.t1 | MTR_5g022470 | 34.722 | 144 | 62 | 2 | 838 | 955 | 1047 | 1184 | 1.01e-17 | 89.4 |
| MS.gene09224.t1 | MTR_1g013360 | 33.882 | 304 | 163 | 6 | 395 | 661 | 379 | 681 | 4.67e-38 | 154 |
| MS.gene09224.t1 | MTR_1g013360 | 33.333 | 129 | 67 | 3 | 843 | 953 | 870 | 997 | 5.52e-12 | 70.5 |
| MS.gene09224.t1 | MTR_8g075340 | 34.603 | 315 | 192 | 5 | 345 | 657 | 424 | 726 | 1.01e-36 | 150 |
| MS.gene09224.t1 | MTR_8g075340 | 36.296 | 135 | 63 | 3 | 838 | 955 | 1026 | 1154 | 9.97e-18 | 89.4 |
| MS.gene09224.t1 | MTR_4g031150 | 28.650 | 363 | 222 | 6 | 383 | 742 | 384 | 712 | 1.92e-34 | 142 |
| MS.gene09224.t1 | MTR_4g031150 | 32.624 | 141 | 78 | 5 | 820 | 959 | 649 | 773 | 7.19e-12 | 70.1 |
| MS.gene09224.t1 | MTR_1g087140 | 30.476 | 315 | 182 | 10 | 381 | 674 | 378 | 676 | 1.59e-29 | 127 |
| MS.gene09224.t1 | MTR_1g087140 | 32.609 | 138 | 69 | 6 | 838 | 964 | 970 | 1094 | 1.66e-13 | 75.5 |
| MS.gene09224.t1 | MTR_7g109150 | 30.357 | 280 | 162 | 4 | 383 | 661 | 335 | 582 | 4.32e-28 | 121 |
| MS.gene09224.t1 | MTR_5g044100 | 70.667 | 75 | 22 | 0 | 837 | 911 | 148 | 222 | 6.98e-28 | 113 |
| MS.gene09224.t1 | MTR_1g090850 | 26.000 | 350 | 208 | 10 | 344 | 666 | 328 | 653 | 2.89e-24 | 110 |
| MS.gene09224.t1 | MTR_1g090850 | 37.692 | 130 | 64 | 4 | 841 | 963 | 926 | 1045 | 3.07e-15 | 81.3 |
| MS.gene09224.t1 | MTR_7g116330 | 33.562 | 146 | 84 | 4 | 826 | 970 | 628 | 761 | 2.14e-17 | 87.8 |
| MS.gene09224.t1 | MTR_7g116330 | 21.542 | 441 | 290 | 11 | 371 | 804 | 354 | 745 | 1.91e-14 | 78.2 |
| MS.gene09224.t1 | MTR_1g079790 | 33.835 | 133 | 78 | 3 | 840 | 970 | 634 | 758 | 1.16e-15 | 82.4 |
| MS.gene09224.t1 | MTR_1g079790 | 25.595 | 168 | 125 | 0 | 371 | 538 | 350 | 517 | 3.43e-12 | 70.9 |
| MS.gene09224.t1 | MTR_1g073840 | 32.331 | 133 | 81 | 3 | 837 | 968 | 631 | 755 | 9.56e-15 | 79.3 |
| MS.gene09224.t1 | MTR_1g073840 | 26.174 | 149 | 110 | 0 | 371 | 519 | 344 | 492 | 7.70e-11 | 66.6 |
| MS.gene09224.t1 | MTR_1g044210 | 31.579 | 133 | 81 | 3 | 837 | 967 | 633 | 757 | 2.52e-13 | 74.7 |
| MS.gene09224.t1 | MTR_1g079790 | 25.595 | 168 | 125 | 0 | 371 | 538 | 350 | 517 | 4.07e-12 | 70.5 |
| MS.gene09224.t1 | MTR_8g019680 | 41.463 | 82 | 36 | 3 | 882 | 963 | 77 | 146 | 5.03e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09224.t1 | AT1G27320 | 68.432 | 982 | 285 | 7 | 1 | 969 | 61 | 1030 | 0.0 | 1348 |
| MS.gene09224.t1 | AT5G35750 | 56.830 | 959 | 374 | 10 | 34 | 967 | 230 | 1173 | 0.0 | 1066 |
| MS.gene09224.t1 | AT2G01830 | 53.086 | 972 | 397 | 14 | 31 | 967 | 113 | 1060 | 0.0 | 990 |
| MS.gene09224.t1 | AT2G01830 | 53.086 | 972 | 397 | 14 | 31 | 967 | 124 | 1071 | 0.0 | 989 |
| MS.gene09224.t1 | AT2G01830 | 53.086 | 972 | 397 | 14 | 31 | 967 | 101 | 1048 | 0.0 | 988 |
| MS.gene09224.t1 | AT2G01830 | 53.086 | 972 | 397 | 14 | 31 | 967 | 101 | 1048 | 0.0 | 988 |
| MS.gene09224.t1 | AT2G01830 | 53.086 | 972 | 397 | 14 | 31 | 967 | 101 | 1048 | 0.0 | 988 |
| MS.gene09224.t1 | AT2G01830 | 53.086 | 972 | 397 | 14 | 31 | 967 | 101 | 1048 | 0.0 | 988 |
| MS.gene09224.t1 | AT5G10720 | 35.252 | 278 | 145 | 3 | 395 | 668 | 369 | 615 | 6.38e-42 | 166 |
| MS.gene09224.t1 | AT5G10720 | 32.414 | 145 | 78 | 3 | 842 | 968 | 779 | 921 | 9.85e-14 | 76.3 |
| MS.gene09224.t1 | AT1G66340 | 29.108 | 426 | 255 | 8 | 383 | 804 | 334 | 716 | 2.19e-38 | 154 |
| MS.gene09224.t1 | AT1G66340 | 29.167 | 120 | 78 | 2 | 840 | 959 | 609 | 721 | 3.94e-11 | 67.8 |
| MS.gene09224.t1 | AT2G17820 | 30.233 | 387 | 244 | 8 | 345 | 728 | 451 | 814 | 1.24e-36 | 150 |
| MS.gene09224.t1 | AT2G17820 | 33.333 | 150 | 62 | 3 | 838 | 955 | 1041 | 1184 | 3.50e-15 | 81.3 |
| MS.gene09224.t1 | AT2G40940 | 32.143 | 280 | 157 | 4 | 383 | 661 | 334 | 581 | 9.72e-31 | 129 |
| MS.gene09224.t1 | AT2G47430 | 31.126 | 302 | 179 | 8 | 380 | 666 | 383 | 670 | 5.38e-29 | 125 |
| MS.gene09224.t1 | AT2G47430 | 37.594 | 133 | 59 | 5 | 836 | 952 | 981 | 1105 | 9.23e-14 | 76.6 |
| MS.gene09224.t1 | AT3G04580 | 34.286 | 140 | 81 | 3 | 828 | 965 | 629 | 759 | 1.77e-15 | 81.6 |
| MS.gene09224.t1 | AT3G04580 | 21.711 | 456 | 292 | 14 | 379 | 817 | 354 | 761 | 1.18e-12 | 72.8 |
| MS.gene09224.t1 | AT3G04580 | 34.286 | 140 | 81 | 3 | 828 | 965 | 629 | 759 | 1.77e-15 | 81.6 |
| MS.gene09224.t1 | AT3G04580 | 21.711 | 456 | 292 | 14 | 379 | 817 | 354 | 761 | 1.18e-12 | 72.8 |
| MS.gene09224.t1 | AT3G23150 | 35.252 | 139 | 74 | 3 | 837 | 970 | 642 | 769 | 6.56e-15 | 79.7 |
Find 188 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAACTTTGGTGACCCTTTC+AGG | 0.130440 | 4.1:-14998057 | MS.gene09224:CDS |
| ATTGCATACCCATCCATTTC+TGG | 0.150261 | 4.1:+14995545 | None:intergenic |
| AACTGCATTCCCTTTGTTTA+TGG | 0.188548 | 4.1:+14996036 | None:intergenic |
| ATTTCTGTTGATATGCTTTC+TGG | 0.198728 | 4.1:-14999408 | MS.gene09224:CDS |
| GATCAGGCAAAGATTGAATT+TGG | 0.209090 | 4.1:-14997393 | MS.gene09224:CDS |
| GTCACTTATAAATGAGGTTT+TGG | 0.260867 | 4.1:-14997415 | MS.gene09224:CDS |
| ATTCTAATTGTTGATGATAA+TGG | 0.264746 | 4.1:-14995704 | MS.gene09224:CDS |
| AGGGATGATGCATATGCTTA+TGG | 0.272594 | 4.1:-14997505 | MS.gene09224:CDS |
| GGCCTCATGAATGGCGAAAT+TGG | 0.276640 | 4.1:-14996310 | MS.gene09224:CDS |
| GGAACAAGAGAACTCTAAAT+AGG | 0.280932 | 4.1:-14995772 | MS.gene09224:CDS |
| CAACAGTACTATCAGTATAT+TGG | 0.283486 | 4.1:-15000248 | MS.gene09224:CDS |
| TCTCATGGGCAACTCAATTA+AGG | 0.288486 | 4.1:-14997085 | MS.gene09224:intron |
| CTTGTTATTGCTCTCCTTGT+TGG | 0.291084 | 4.1:-14997870 | MS.gene09224:CDS |
| ATGTATGGCTCAAATATATC+AGG | 0.301140 | 4.1:-14998106 | MS.gene09224:CDS |
| GGATCACCTATTAGCAGTTT+AGG | 0.310227 | 4.1:+14997135 | None:intergenic |
| TCTCTTAGCCATCTTCTTGT+TGG | 0.315553 | 4.1:-14995734 | MS.gene09224:CDS |
| CTCTTAGCCATCTTCTTGTT+GGG | 0.318317 | 4.1:-14995733 | MS.gene09224:CDS |
| CGATTATGCTGTAGAGGAAT+TGG | 0.327475 | 4.1:-14999496 | MS.gene09224:CDS |
| TCAGTTCGACGCATGTTTCA+TGG | 0.329522 | 4.1:-14995579 | MS.gene09224:CDS |
| GTTGCTTGAATCCTTTCATT+TGG | 0.333595 | 4.1:+14998915 | None:intergenic |
| TCATCGGTGTTCTGATTTCA+TGG | 0.354261 | 4.1:+14997639 | None:intergenic |
| AACAGTACTATCAGTATATT+GGG | 0.359905 | 4.1:-15000247 | MS.gene09224:CDS |
| ATTGGAGCCATCCCCTCTTC+AGG | 0.361853 | 4.1:-14999478 | MS.gene09224:CDS |
| GGATATTCAAATGCCAGAAA+TGG | 0.363538 | 4.1:-14995558 | MS.gene09224:CDS |
| CCTGAGTTGGAAAGGATTCA+AGG | 0.368177 | 4.1:-14996539 | MS.gene09224:CDS |
| AAATAGACATAGCTTGAATA+TGG | 0.369912 | 4.1:+15000036 | None:intergenic |
| GCATAATCGTTCTTATGAAC+TGG | 0.371534 | 4.1:+14999510 | None:intergenic |
| CAAGTTCCTAAACTGCTAAT+AGG | 0.375479 | 4.1:-14997141 | MS.gene09224:CDS |
| GAAAGGATTCAAGCAACTAA+TGG | 0.381749 | 4.1:-14998909 | MS.gene09224:CDS |
| AACTTTATCGGGAAGTTTCT+CGG | 0.392394 | 4.1:-14995009 | MS.gene09224:CDS |
| ACACAGAAGTATCTATAAAC+TGG | 0.396943 | 4.1:-14995138 | MS.gene09224:CDS |
| TCATTTGGAGTTGCATTTGA+TGG | 0.397149 | 4.1:+14998930 | None:intergenic |
| ATTATTTGCCGAAACCTTCC+AGG | 0.397385 | 4.1:+14997114 | None:intergenic |
| TTTGAGCCATACATGGCAAT+TGG | 0.398441 | 4.1:+14998115 | None:intergenic |
| GTGTTGCGTGCAAGAGAATC+AGG | 0.399039 | 4.1:-14999041 | MS.gene09224:CDS |
| TTGAAGCCGAACAACTTTAT+CGG | 0.400783 | 4.1:-14995021 | MS.gene09224:CDS |
| GGAAACATGAGATGCATTGC+AGG | 0.401426 | 4.1:-14998036 | MS.gene09224:intron |
| GATGACTGCAGATGTAATTC+AGG | 0.412226 | 4.1:-14995098 | MS.gene09224:CDS |
| TCTTGATTGAGCAGGAAGTT+TGG | 0.412734 | 4.1:-14996003 | MS.gene09224:CDS |
| GCTGCAATATTAACTTCAAT+TGG | 0.416348 | 4.1:-14997897 | MS.gene09224:CDS |
| GAACAAGAGAACTCTAAATA+GGG | 0.416973 | 4.1:-14995771 | MS.gene09224:CDS |
| TGTTTATGGTTGACACCCCT+TGG | 0.417467 | 4.1:+14996050 | None:intergenic |
| TATGCCACACCACTTGTTAG+AGG | 0.422210 | 4.1:+14999621 | None:intergenic |
| ATTGTATCTGTTGAAGATAC+AGG | 0.422648 | 4.1:-14996454 | MS.gene09224:CDS |
| GTTGGACTGTAGTGTCTTTG+TGG | 0.426681 | 4.1:-15000169 | MS.gene09224:CDS |
| ACTAAGCATTAGCAAGTGTT+TGG | 0.428271 | 4.1:-14996335 | MS.gene09224:CDS |
| TTAACAAGAATGAACAACTT+TGG | 0.432009 | 4.1:+14995914 | None:intergenic |
| AAAGGATTCAAGCAACTAAT+GGG | 0.437942 | 4.1:-14998908 | MS.gene09224:intron |
| TGAAAGGGCTAGGATTGTTC+AGG | 0.438583 | 4.1:-15000081 | MS.gene09224:CDS |
| ATTTGATGTTGAGTCATTAG+TGG | 0.439863 | 4.1:-14998212 | MS.gene09224:CDS |
| TCCCGAAAACATGGAGGAAC+TGG | 0.442693 | 4.1:-14996364 | MS.gene09224:CDS |
| GCAAATAATTACTAATCTCA+TGG | 0.446857 | 4.1:-14997100 | MS.gene09224:CDS |
| TCTGATAAGTCCCAAGGAAA+AGG | 0.449413 | 4.1:-14997303 | MS.gene09224:CDS |
| ATATTGCTAAACAGGTATCT+TGG | 0.449675 | 4.1:-14998241 | MS.gene09224:intron |
| AAACATGGAGGAACTGGTAT+TGG | 0.453248 | 4.1:-14996358 | MS.gene09224:CDS |
| TTTACTGCTGTCTTCGCCAA+TGG | 0.460268 | 4.1:-14996250 | MS.gene09224:CDS |
| AACTTCCCGATAAAGTTGTT+CGG | 0.460960 | 4.1:+14995015 | None:intergenic |
| CATGTCAGCACTCTTAACTT+TGG | 0.464215 | 4.1:-14998070 | MS.gene09224:CDS |
| TCTGCAGTCATCGCTAAAAT+CGG | 0.464289 | 4.1:+14995109 | None:intergenic |
| GGAGATTGTTCATTCTATAG+AGG | 0.466518 | 4.1:-14996620 | MS.gene09224:CDS |
| GCATCTCATGTTTCCTGAAA+GGG | 0.466982 | 4.1:+14998044 | None:intergenic |
| AGATTTAGATGTAACTCAAC+AGG | 0.467158 | 4.1:-14997478 | MS.gene09224:CDS |
| CATCGGTGTTCTGATTTCAT+GGG | 0.467349 | 4.1:+14997640 | None:intergenic |
| TGAAGCCGAACAACTTTATC+GGG | 0.468450 | 4.1:-14995020 | MS.gene09224:CDS |
| ATACAAAGATGTGGCTGAAA+TGG | 0.468585 | 4.1:-15000307 | None:intergenic |
| ACTCATCCAATTGCCATGTA+TGG | 0.469930 | 4.1:-14998121 | MS.gene09224:CDS |
| AGGTTGGATTATTAAGAGAA+TGG | 0.472979 | 4.1:-14999550 | MS.gene09224:CDS |
| TAAAGTTGTTCGGCTTCAAA+TGG | 0.473516 | 4.1:+14995025 | None:intergenic |
| GAAAATAAGTACCTGATCAA+TGG | 0.475341 | 4.1:+14999977 | None:intergenic |
| TCTTGTAGACGGCAAATGTA+AGG | 0.478724 | 4.1:+14998961 | None:intergenic |
| GACAGCAGTAAAAGTAAAAG+TGG | 0.479310 | 4.1:+14996261 | None:intergenic |
| CCTTGGCATTCACGTTGAAA+CGG | 0.483428 | 4.1:-14996086 | MS.gene09224:CDS |
| TAAGAGTGCTTCATTATGAA+AGG | 0.486345 | 4.1:-14999593 | MS.gene09224:CDS |
| TGCTAGCATGTGTGATGAAA+GGG | 0.486559 | 4.1:-15000096 | MS.gene09224:CDS |
| GACGAACCTACTTGCATGAA+TGG | 0.486640 | 4.1:+14996391 | None:intergenic |
| ACCTGCATATTCAGAATTTG+AGG | 0.486963 | 4.1:-14996176 | MS.gene09224:CDS |
| CCCTCAAATTCTGAATATGC+AGG | 0.488168 | 4.1:+14996175 | None:intergenic |
| TCTAGTGTCACTTATAAATG+AGG | 0.488685 | 4.1:-14997421 | MS.gene09224:CDS |
| CCTTGAATCCTTTCCAACTC+AGG | 0.489334 | 4.1:+14996539 | None:intergenic |
| CTTCTCAAATCAAATCGGTT+AGG | 0.491529 | 4.1:-14998990 | MS.gene09224:CDS |
| AAACTGCTAATAGGTGATCC+TGG | 0.491656 | 4.1:-14997132 | MS.gene09224:CDS |
| GAGTCCCTCAGCCATTGATC+AGG | 0.494009 | 4.1:-14999988 | MS.gene09224:intron |
| TCAGGCTTCTCAAATCAAAT+CGG | 0.494173 | 4.1:-14998995 | MS.gene09224:CDS |
| TGTTGACATGGGTATTGGGT+TGG | 0.494780 | 4.1:-15000187 | MS.gene09224:CDS |
| TGTTGATATGCTTTCTGGAA+AGG | 0.498415 | 4.1:-14999403 | MS.gene09224:intron |
| AGAGAGTGAAGAGAGAGTTG+TGG | 0.498961 | 4.1:-15000220 | MS.gene09224:CDS |
| AGCATTAGCAAGTGTTTGGT+TGG | 0.499734 | 4.1:-14996331 | MS.gene09224:CDS |
| TTCAAGGCTTTCAGTCAAGA+TGG | 0.501177 | 4.1:-14996523 | MS.gene09224:CDS |
| TTCAGTCAAGATGGACCACT+TGG | 0.502714 | 4.1:-14996514 | MS.gene09224:CDS |
| TGCTAAACAGGTATCTTGGT+GGG | 0.506352 | 4.1:-14998237 | MS.gene09224:intron |
| TACAGCGAGAGATGAATGTT+AGG | 0.506665 | 4.1:-14995793 | MS.gene09224:CDS |
| TCGTCGATCTCCCGAAAACA+TGG | 0.509308 | 4.1:-14996373 | MS.gene09224:CDS |
| TGTTTGGTTGGCCTCATGAA+TGG | 0.512361 | 4.1:-14996319 | MS.gene09224:CDS |
| TGCCTAAGGTGTGGAATGGA+TGG | 0.514612 | 4.1:-14995061 | MS.gene09224:CDS |
| GTTCTAATGAGTGTAAAATA+CGG | 0.515138 | 4.1:-14996219 | MS.gene09224:CDS |
| ATTTGAGGGTATGAATGCAT+TGG | 0.519831 | 4.1:-14996161 | MS.gene09224:CDS |
| CAACGTGAATGCCAAGGCGT+TGG | 0.521697 | 4.1:+14996092 | None:intergenic |
| CAACATGGTCTTGATTGAGC+AGG | 0.522436 | 4.1:-14996011 | MS.gene09224:CDS |
| AATCCAGAAAATACATTGAG+TGG | 0.523791 | 4.1:-14996583 | MS.gene09224:CDS |
| TGCATCTCATGTTTCCTGAA+AGG | 0.524248 | 4.1:+14998043 | None:intergenic |
| GTGCAAGAGAATCAGGCAAA+GGG | 0.525841 | 4.1:-14999034 | MS.gene09224:CDS |
| CGGTTTCAGATTTGAACCAA+GGG | 0.529721 | 4.1:-14996066 | MS.gene09224:CDS |
| TAGGTGATCCTGGAAGGTTT+CGG | 0.530999 | 4.1:-14997122 | MS.gene09224:CDS |
| GAAATCAGAACACCGATGAA+TGG | 0.536195 | 4.1:-14997635 | MS.gene09224:CDS |
| TGATATATTTGAGCCATACA+TGG | 0.537691 | 4.1:+14998108 | None:intergenic |
| ATTCAAATGCCAGAAATGGA+TGG | 0.537787 | 4.1:-14995554 | MS.gene09224:CDS |
| GTGAATCGTGCAGTAGCAGC+TGG | 0.538402 | 4.1:-14995680 | MS.gene09224:CDS |
| GTCAGAACAGCACAGGAAAG+TGG | 0.540070 | 4.1:-14997450 | MS.gene09224:CDS |
| CAAATAATTACTAATCTCAT+GGG | 0.541408 | 4.1:-14997099 | MS.gene09224:CDS |
| TTGTGAAAAGTTGCCTGAGT+TGG | 0.542609 | 4.1:-14996552 | MS.gene09224:CDS |
| GCATGTGTGATGAAAGGGCT+AGG | 0.544298 | 4.1:-15000091 | MS.gene09224:CDS |
| GAACAATCTCCTCAACAAGA+TGG | 0.546858 | 4.1:+14996632 | None:intergenic |
| AGATGATTACCATGAAATGA+TGG | 0.547933 | 4.1:-14997805 | MS.gene09224:CDS |
| CCTGCATATTCAGAATTTGA+GGG | 0.551039 | 4.1:-14996175 | MS.gene09224:CDS |
| TGTGACTATCCATCTTGTTG+AGG | 0.552354 | 4.1:-14996641 | MS.gene09224:CDS |
| AATTTGAGAAGCAACAAGGT+TGG | 0.555193 | 4.1:-14999566 | MS.gene09224:CDS |
| GTATCTTGTGCAAATATGAC+AGG | 0.555330 | 4.1:+14999444 | None:intergenic |
| CAATATCACATCCAACGCCT+TGG | 0.556712 | 4.1:-14996103 | MS.gene09224:CDS |
| ATTGATGAGATCACTAGAGA+TGG | 0.556798 | 4.1:+14996480 | None:intergenic |
| CAAAGATGTGGCTGAAATGG+TGG | 0.559449 | 4.1:-15000304 | None:intergenic |
| GCAAGCATGCTTGCCCTGAG+TGG | 0.560278 | 4.1:+14995824 | None:intergenic |
| AAGAGTGCTTCATTATGAAA+GGG | 0.560545 | 4.1:-14999592 | MS.gene09224:CDS |
| ATTTGATTTGAGAAGCCTGA+AGG | 0.561335 | 4.1:+14998998 | None:intergenic |
| TGCTAATAGGTGATCCTGGA+AGG | 0.562191 | 4.1:-14997128 | MS.gene09224:CDS |
| CAAATGCAACTCCAAATGAA+AGG | 0.563584 | 4.1:-14998926 | MS.gene09224:CDS |
| TTCAAATGCCAGAAATGGAT+GGG | 0.564303 | 4.1:-14995553 | MS.gene09224:intron |
| TTGCTAGCATGTGTGATGAA+AGG | 0.564904 | 4.1:-15000097 | MS.gene09224:CDS |
| GGGTGTCAACCATAAACAAA+GGG | 0.565304 | 4.1:-14996045 | MS.gene09224:CDS |
| AAGTACCTGATCAATGGCTG+AGG | 0.566544 | 4.1:+14999983 | None:intergenic |
| AGCAGATGTTGCAAAATCCC+AGG | 0.568472 | 4.1:-14997760 | MS.gene09224:intron |
| ACAAGAATGAACAACTTTGG+AGG | 0.570727 | 4.1:+14995917 | None:intergenic |
| TATTCTTCCTGAAGAGGGGA+TGG | 0.575235 | 4.1:+14999471 | None:intergenic |
| TTAGCCATCTTCTTGTTGGG+AGG | 0.575871 | 4.1:-14995730 | MS.gene09224:CDS |
| GAGCATATTCTTCCTGAAGA+GGG | 0.577257 | 4.1:+14999466 | None:intergenic |
| ATGAGAGGTTGAGATTCTCT+AGG | 0.586217 | 4.1:+14996421 | None:intergenic |
| ATCCAATTTCGCCATTCATG+AGG | 0.589404 | 4.1:+14996308 | None:intergenic |
| TGTATGGCTCAAATATATCA+GGG | 0.591616 | 4.1:-14998105 | MS.gene09224:CDS |
| TTGCTAAACAGGTATCTTGG+TGG | 0.592307 | 4.1:-14998238 | MS.gene09224:intron |
| GGAGCATATTCTTCCTGAAG+AGG | 0.594545 | 4.1:+14999465 | None:intergenic |
| TTTGATTTGAGAAGCCTGAA+GGG | 0.594834 | 4.1:+14998999 | None:intergenic |
| ATTAGAACTGAGGAGTCCAT+TGG | 0.595386 | 4.1:+14996234 | None:intergenic |
| CTATCATCACAAAACCACTC+AGG | 0.595668 | 4.1:-14995838 | MS.gene09224:CDS |
| AATATTGCAGCACATGGCAA+AGG | 0.595803 | 4.1:+14997909 | None:intergenic |
| TAAGAACGATTATGCTGTAG+AGG | 0.600889 | 4.1:-14999502 | MS.gene09224:CDS |
| ACGGTTTCAGATTTGAACCA+AGG | 0.601766 | 4.1:-14996067 | MS.gene09224:CDS |
| CGTGCAAGAGAATCAGGCAA+AGG | 0.602570 | 4.1:-14999035 | MS.gene09224:CDS |
| TCACCTAAAACACCATTCAT+CGG | 0.602655 | 4.1:+14997623 | None:intergenic |
| AAAAGTTGCCTGAGTTGGAA+AGG | 0.608555 | 4.1:-14996547 | MS.gene09224:CDS |
| TACAGGTAGAATCAGAGAGA+TGG | 0.608677 | 4.1:-14995173 | MS.gene09224:CDS |
| TTCACTCCATTCATGCAAGT+AGG | 0.609373 | 4.1:-14996397 | MS.gene09224:CDS |
| ATTTGGTAAGCTAGAGCTTG+AGG | 0.609575 | 4.1:-14997376 | MS.gene09224:CDS |
| GGAATATGTCAGAACAGCAC+AGG | 0.609824 | 4.1:-14997457 | MS.gene09224:CDS |
| GTTTACAAGCTACTGAGAAG+AGG | 0.609832 | 4.1:-15000130 | MS.gene09224:CDS |
| CATGAGAAATGCCTAAGGTG+TGG | 0.612289 | 4.1:-14995070 | MS.gene09224:CDS |
| TATCATCACAAAACCACTCA+GGG | 0.614790 | 4.1:-14995837 | MS.gene09224:CDS |
| ATTGCAGCACATGGCAAAGG+CGG | 0.615431 | 4.1:+14997912 | None:intergenic |
| GGGGTGTCAACCATAAACAA+AGG | 0.619294 | 4.1:-14996046 | MS.gene09224:CDS |
| CATAGAAAATATGTCCAACA+AGG | 0.621926 | 4.1:+14997856 | None:intergenic |
| TTTGAGAGGCCTCTAACAAG+TGG | 0.622010 | 4.1:-14999630 | MS.gene09224:CDS |
| GCTAAACAGGTATCTTGGTG+GGG | 0.627851 | 4.1:-14998236 | MS.gene09224:intron |
| CATGCGTCGAACTGATGAGG+TGG | 0.627952 | 4.1:+14995587 | None:intergenic |
| CCGTTTCAACGTGAATGCCA+AGG | 0.630331 | 4.1:+14996086 | None:intergenic |
| TGGAAGATATCTCTTGTAGA+CGG | 0.637440 | 4.1:+14998950 | None:intergenic |
| GAAATGCCTAAGGTGTGGAA+TGG | 0.638335 | 4.1:-14995065 | MS.gene09224:CDS |
| CTACACATGAGAAATGCCTA+AGG | 0.639949 | 4.1:-14995075 | MS.gene09224:CDS |
| GAACAATTTGAGAAGCAACA+AGG | 0.640709 | 4.1:-14999570 | MS.gene09224:CDS |
| AGTACCTGATCAATGGCTGA+GGG | 0.641644 | 4.1:+14999984 | None:intergenic |
| AGCATATTCTTCCTGAAGAG+GGG | 0.643515 | 4.1:+14999467 | None:intergenic |
| GAAGTTAATATTGCAGCACA+TGG | 0.648248 | 4.1:+14997903 | None:intergenic |
| GTCCCAAGGAAAAGGAGTCG+AGG | 0.651906 | 4.1:-14997295 | MS.gene09224:intron |
| TCTGTTGAAGATACAGGTGA+CGG | 0.654876 | 4.1:-14996448 | MS.gene09224:CDS |
| GCCTAAGGTGTGGAATGGAT+GGG | 0.659789 | 4.1:-14995060 | MS.gene09224:CDS |
| TCTGATTTCATGGGAAACAG+TGG | 0.660492 | 4.1:+14997649 | None:intergenic |
| GATGTGGTTTGTGTTAGCAG+TGG | 0.662109 | 4.1:-14995635 | MS.gene09224:CDS |
| ACCCATCCATTCCACACCTT+AGG | 0.666090 | 4.1:+14995059 | None:intergenic |
| TTGCACGCAACACATTATCA+CGG | 0.668088 | 4.1:+14999051 | None:intergenic |
| AGCACAAGGAAAATCAGCCA+CGG | 0.673243 | 4.1:-14995944 | MS.gene09224:CDS |
| AAACATGCGTCGAACTGATG+AGG | 0.675854 | 4.1:+14995584 | None:intergenic |
| AAAGATGTGGCTGAAATGGT+GGG | 0.675883 | 4.1:-15000303 | None:intergenic |
| GAGGCCTCTAACAAGTGGTG+TGG | 0.676496 | 4.1:-14999625 | MS.gene09224:CDS |
| TGCAAGAGAATCAGGCAAAG+GGG | 0.689158 | 4.1:-14999033 | MS.gene09224:CDS |
| TCGATCTCCCGAAAACATGG+AGG | 0.692524 | 4.1:-14996370 | MS.gene09224:CDS |
| GTATGGCTCAAATATATCAG+GGG | 0.693592 | 4.1:-14998104 | MS.gene09224:CDS |
| GGTTTCAGATTTGAACCAAG+GGG | 0.702437 | 4.1:-14996065 | MS.gene09224:CDS |
| AGGGAATGCAGTTATCAACA+TGG | 0.702500 | 4.1:-14996026 | MS.gene09224:CDS |
| ATGGAAGAGAAAGAACCAAG+TGG | 0.711725 | 4.1:+14996499 | None:intergenic |
| ATGAATGGAGTGAAGATGAG+AGG | 0.715966 | 4.1:+14996406 | None:intergenic |
| ACAACTTTGGAGGAAAACCG+TGG | 0.762101 | 4.1:+14995927 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTATTTTATATTTTGTAA+TGG | + | chr4.1:14998342-14998361 | None:intergenic | 10.0% |
| !! | AAAATCTTAATTGTTTGATT+GGG | - | chr4.1:14995576-14995595 | MS.gene09224:CDS | 15.0% |
| !! | TAAAATCTTAATTGTTTGAT+TGG | - | chr4.1:14995575-14995594 | MS.gene09224:CDS | 15.0% |
| !! | TACTTAACAGTTTATATAAA+AGG | - | chr4.1:14999899-14999918 | MS.gene09224:intron | 15.0% |
| !!! | AAATTTGATGATTTATAGTT+TGG | - | chr4.1:14999788-14999807 | MS.gene09224:intron | 15.0% |
| !!! | AACTATAAATCATCAAATTT+TGG | + | chr4.1:14999788-14999807 | None:intergenic | 15.0% |
| !!! | ATTGATAATTACATAAATTG+TGG | + | chr4.1:15000027-15000046 | None:intergenic | 15.0% |
| !!! | GTAATATATTTTTCATTTCT+TGG | - | chr4.1:14998017-14998036 | MS.gene09224:intron | 15.0% |
| !!! | GTTTCTTGTTAAATTTTTTA+AGG | - | chr4.1:14995926-14995945 | MS.gene09224:CDS | 15.0% |
| !!! | TTATCTTTTGTTATAGAAAT+AGG | - | chr4.1:14996777-14996796 | MS.gene09224:intron | 15.0% |
| !! | AAATTTCCACATAAAAAATG+TGG | - | chr4.1:14999822-14999841 | MS.gene09224:intron | 20.0% |
| !! | CAAACAATTAAATCATGAAA+AGG | + | chr4.1:14998098-14998117 | None:intergenic | 20.0% |
| !! | CAAATAATTACTAATCTCAT+GGG | - | chr4.1:14998191-14998210 | MS.gene09224:CDS | 20.0% |
| !! | GCAATATACAAGAAATTAAA+AGG | + | chr4.1:14997036-14997055 | None:intergenic | 20.0% |
| !!! | ATTCTAATTGTTGATGATAA+TGG | - | chr4.1:14999586-14999605 | MS.gene09224:CDS | 20.0% |
| !!! | CTTTTCATGATTTAATTGTT+TGG | - | chr4.1:14998096-14998115 | MS.gene09224:CDS | 20.0% |
| !!! | TCAATAGTTCATGTAATTTT+TGG | - | chr4.1:14996969-14996988 | MS.gene09224:intron | 20.0% |
| ! | AAAATTTCACGATGATCAAA+GGG | + | chr4.1:14998045-14998064 | None:intergenic | 25.0% |
| ! | AAATAGACATAGCTTGAATA+TGG | + | chr4.1:14995257-14995276 | None:intergenic | 25.0% |
| ! | AACAGTACTATCAGTATATT+GGG | - | chr4.1:14995043-14995062 | MS.gene09224:CDS | 25.0% |
| ! | ATAGAACAAAGTTATGGTTT+AGG | + | chr4.1:14997754-14997773 | None:intergenic | 25.0% |
| ! | ATGAACAAAGAACAAACTAA+TGG | + | chr4.1:14996444-14996463 | None:intergenic | 25.0% |
| ! | CAAGAAACTGCAATTATAAT+TGG | + | chr4.1:14997621-14997640 | None:intergenic | 25.0% |
| ! | CAGATGATTTATCTATTCTA+TGG | + | chr4.1:14995996-14996015 | None:intergenic | 25.0% |
| ! | CTATGGTTTAAATATCCATT+AGG | + | chr4.1:14995979-14995998 | None:intergenic | 25.0% |
| ! | CTTACATTATGGTATAGTTT+GGG | + | chr4.1:14996871-14996890 | None:intergenic | 25.0% |
| ! | GCAAATAATTACTAATCTCA+TGG | - | chr4.1:14998190-14998209 | MS.gene09224:CDS | 25.0% |
| ! | GTTCTAATGAGTGTAAAATA+CGG | - | chr4.1:14999071-14999090 | MS.gene09224:intron | 25.0% |
| ! | TAGAACAAAGTTATGGTTTA+GGG | + | chr4.1:14997753-14997772 | None:intergenic | 25.0% |
| ! | TAGAACAATCTTTGATCAAA+GGG | + | chr4.1:14995369-14995388 | None:intergenic | 25.0% |
| ! | TCTTACATTATGGTATAGTT+TGG | + | chr4.1:14996872-14996891 | None:intergenic | 25.0% |
| ! | TGCATTATAGAACAAAGTTA+TGG | + | chr4.1:14997760-14997779 | None:intergenic | 25.0% |
| ! | TTAACAAGAATGAACAACTT+TGG | + | chr4.1:14999379-14999398 | None:intergenic | 25.0% |
| ! | TTTCTTGTATATTGCTAAAC+AGG | - | chr4.1:14997041-14997060 | MS.gene09224:intron | 25.0% |
| !! | TGTCTGATTTTCAACTATTT+AGG | - | chr4.1:14997720-14997739 | MS.gene09224:intron | 25.0% |
| !! | TGTTCTATAATGCATTTTCA+GGG | - | chr4.1:14997766-14997785 | MS.gene09224:CDS | 25.0% |
| !! | TTGTTCTATAATGCATTTTC+AGG | - | chr4.1:14997765-14997784 | MS.gene09224:CDS | 25.0% |
| AAAGGATTCAAGCAACTAAT+GGG | - | chr4.1:14996382-14996401 | MS.gene09224:CDS | 30.0% | |
| AACTATGCTGAACATTAAGA+AGG | + | chr4.1:14997305-14997324 | None:intergenic | 30.0% | |
| AATCCAGAAAATACATTGAG+TGG | - | chr4.1:14998707-14998726 | MS.gene09224:intron | 30.0% | |
| ACGAACAGTTGAACATAATT+AGG | - | chr4.1:14996563-14996582 | MS.gene09224:CDS | 30.0% | |
| AGATGATTACCATGAAATGA+TGG | - | chr4.1:14997485-14997504 | MS.gene09224:CDS | 30.0% | |
| AGATTTAGATGTAACTCAAC+AGG | - | chr4.1:14997812-14997831 | MS.gene09224:CDS | 30.0% | |
| AGGTTGGATTATTAAGAGAA+TGG | - | chr4.1:14995740-14995759 | MS.gene09224:CDS | 30.0% | |
| AGTGACATGCATGATTAATA+AGG | + | chr4.1:14998237-14998256 | None:intergenic | 30.0% | |
| ATATTCACTTGTTCATCAAC+AGG | - | chr4.1:14996212-14996231 | MS.gene09224:CDS | 30.0% | |
| ATATTGCTAAACAGGTATCT+TGG | - | chr4.1:14997049-14997068 | MS.gene09224:intron | 30.0% | |
| ATCATCATTGTGTTAGAAGT+TGG | - | chr4.1:15000059-15000078 | MS.gene09224:CDS | 30.0% | |
| ATGTATGGCTCAAATATATC+AGG | - | chr4.1:14997184-14997203 | MS.gene09224:intron | 30.0% | |
| ATTGTATCTGTTGAAGATAC+AGG | - | chr4.1:14998836-14998855 | MS.gene09224:intron | 30.0% | |
| ATTTCTGTTGATATGCTTTC+TGG | - | chr4.1:14995882-14995901 | MS.gene09224:CDS | 30.0% | |
| ATTTGATGTTGAGTCATTAG+TGG | - | chr4.1:14997078-14997097 | MS.gene09224:intron | 30.0% | |
| CAACAGTACTATCAGTATAT+TGG | - | chr4.1:14995042-14995061 | MS.gene09224:CDS | 30.0% | |
| CATAGAAAATATGTCCAACA+AGG | + | chr4.1:14997437-14997456 | None:intergenic | 30.0% | |
| CTAGAACAATCTTTGATCAA+AGG | + | chr4.1:14995370-14995389 | None:intergenic | 30.0% | |
| CTTTGATCAAAGATTGTTCT+AGG | - | chr4.1:14995368-14995387 | MS.gene09224:intron | 30.0% | |
| GAAAATAAGTACCTGATCAA+TGG | + | chr4.1:14995316-14995335 | None:intergenic | 30.0% | |
| GAAAATTTCACGATGATCAA+AGG | + | chr4.1:14998046-14998065 | None:intergenic | 30.0% | |
| GAACAAGAGAACTCTAAATA+GGG | - | chr4.1:14999519-14999538 | MS.gene09224:CDS | 30.0% | |
| GAACTATTGAATTTCAGAGT+AGG | + | chr4.1:14996959-14996978 | None:intergenic | 30.0% | |
| GCTGCAATATTAACTTCAAT+TGG | - | chr4.1:14997393-14997412 | MS.gene09224:CDS | 30.0% | |
| TACAATAGACTTAAATGTCC+TGG | - | chr4.1:14996027-14996046 | MS.gene09224:CDS | 30.0% | |
| TACATAAGCACTTACATGAT+AGG | + | chr4.1:14998309-14998328 | None:intergenic | 30.0% | |
| TGATATATTTGAGCCATACA+TGG | + | chr4.1:14997185-14997204 | None:intergenic | 30.0% | |
| TGTATGGCTCAAATATATCA+GGG | - | chr4.1:14997185-14997204 | MS.gene09224:intron | 30.0% | |
| TGTGAACTGCAAAACAATTA+CGG | + | chr4.1:14998612-14998631 | None:intergenic | 30.0% | |
| TGTTCACTCTTCTTACATTA+TGG | + | chr4.1:14996882-14996901 | None:intergenic | 30.0% | |
| ! | AAACCACTCAATGTATTTTC+TGG | + | chr4.1:14998713-14998732 | None:intergenic | 30.0% |
| ! | ATTAATCATGCATGTCACTT+AGG | - | chr4.1:14998238-14998257 | MS.gene09224:intron | 30.0% |
| ! | CATAAATTGTGGTATTTCTG+TGG | + | chr4.1:15000016-15000035 | None:intergenic | 30.0% |
| ! | GTCACTTATAAATGAGGTTT+TGG | - | chr4.1:14997875-14997894 | MS.gene09224:CDS | 30.0% |
| ! | TACTTTTGCAATTCGATTCA+CGG | + | chr4.1:14997463-14997482 | None:intergenic | 30.0% |
| ! | TTTTAAGCTCCATCATTTCA+TGG | + | chr4.1:14997497-14997516 | None:intergenic | 30.0% |
| ! | TTTTACACTCATTAGAACTG+AGG | + | chr4.1:14999069-14999088 | None:intergenic | 30.0% |
| ! | TTTTGACATACGTTCGATTT+TGG | - | chr4.1:14997944-14997963 | MS.gene09224:intron | 30.0% |
| ! | TTTTTCCCATCAAATGTGAA+TGG | + | chr4.1:14996540-14996559 | None:intergenic | 30.0% |
| !! | AAGAGTGCTTCATTATGAAA+GGG | - | chr4.1:14995698-14995717 | MS.gene09224:CDS | 30.0% |
| !! | ACACAGAAGTATCTATAAAC+TGG | - | chr4.1:15000152-15000171 | MS.gene09224:CDS | 30.0% |
| !! | TAAGAGTGCTTCATTATGAA+AGG | - | chr4.1:14995697-14995716 | MS.gene09224:CDS | 30.0% |
| !! | TCTAGTGTCACTTATAAATG+AGG | - | chr4.1:14997869-14997888 | MS.gene09224:CDS | 30.0% |
| !!! | CTATTTTTTATAAGCTGTCC+TGG | + | chr4.1:14996723-14996742 | None:intergenic | 30.0% |
| !!! | TATAAATGAGGTTTTGGATC+AGG | - | chr4.1:14997881-14997900 | MS.gene09224:CDS | 30.0% |
| !!! | TCTTCTCCACATTTTTTATG+TGG | + | chr4.1:14999831-14999850 | None:intergenic | 30.0% |
| AAAAAGGTAGATGCATACCT+GGG | + | chr4.1:14997550-14997569 | None:intergenic | 35.0% | |
| AACACTCCATTCACATTTGA+TGG | - | chr4.1:14996531-14996550 | MS.gene09224:CDS | 35.0% | |
| AACTTCCCGATAAAGTTGTT+CGG | + | chr4.1:15000278-15000297 | None:intergenic | 35.0% | |
| AACTTTATCGGGAAGTTTCT+CGG | - | chr4.1:15000281-15000300 | MS.gene09224:CDS | 35.0% | |
| AAGCTATCCTAGAGAGTTTA+TGG | - | chr4.1:14998399-14998418 | MS.gene09224:intron | 35.0% | |
| AATTGTTTGGCAATCACAGT+TGG | - | chr4.1:14998109-14998128 | MS.gene09224:CDS | 35.0% | |
| AATTTGAGAAGCAACAAGGT+TGG | - | chr4.1:14995724-14995743 | MS.gene09224:CDS | 35.0% | |
| ACAAATTCATCGAGTCAGAT+AGG | - | chr4.1:14996144-14996163 | MS.gene09224:CDS | 35.0% | |
| ACAAGAATGAACAACTTTGG+AGG | + | chr4.1:14999376-14999395 | None:intergenic | 35.0% | |
| ACACTCCATTCACATTTGAT+GGG | - | chr4.1:14996532-14996551 | MS.gene09224:CDS | 35.0% | |
| ACCTGCATATTCAGAATTTG+AGG | - | chr4.1:14999114-14999133 | MS.gene09224:intron | 35.0% | |
| ACTAAGCATTAGCAAGTGTT+TGG | - | chr4.1:14998955-14998974 | MS.gene09224:CDS | 35.0% | |
| ACTAGTTCAGCTGAAAACTT+TGG | + | chr4.1:14995953-14995972 | None:intergenic | 35.0% | |
| AGCTGAACTAGTATACCTAA+TGG | - | chr4.1:14995961-14995980 | MS.gene09224:CDS | 35.0% | |
| ATCTACATAGAAGACACACA+AGG | - | chr4.1:14999969-14999988 | MS.gene09224:intron | 35.0% | |
| ATTCAAATGCCAGAAATGGA+TGG | - | chr4.1:14999736-14999755 | MS.gene09224:intron | 35.0% | |
| ATTGATGAGATCACTAGAGA+TGG | + | chr4.1:14998813-14998832 | None:intergenic | 35.0% | |
| CAAATACGTCAATCCAAACA+TGG | + | chr4.1:14996589-14996608 | None:intergenic | 35.0% | |
| CAAATGCAACTCCAAATGAA+AGG | - | chr4.1:14996364-14996383 | MS.gene09224:CDS | 35.0% | |
| CAAGACCTTAACTATCACAA+GGG | + | chr4.1:14996919-14996938 | None:intergenic | 35.0% | |
| CAAGTTCCTAAACTGCTAAT+AGG | - | chr4.1:14998149-14998168 | MS.gene09224:CDS | 35.0% | |
| CAGAACTTTAGATAAACCAG+AGG | + | chr4.1:14996486-14996505 | None:intergenic | 35.0% | |
| CCTGCATATTCAGAATTTGA+GGG | - | chr4.1:14999115-14999134 | MS.gene09224:intron | 35.0% | |
| CTTAACCTGCACTAATTACA+CGG | - | chr4.1:14997589-14997608 | MS.gene09224:intron | 35.0% | |
| CTTCTCAAATCAAATCGGTT+AGG | - | chr4.1:14996300-14996319 | MS.gene09224:CDS | 35.0% | |
| GAAAGGATTCAAGCAACTAA+TGG | - | chr4.1:14996381-14996400 | MS.gene09224:CDS | 35.0% | |
| GAACAATTTGAGAAGCAACA+AGG | - | chr4.1:14995720-14995739 | MS.gene09224:CDS | 35.0% | |
| GAACATAATTAGGCCATGTT+TGG | - | chr4.1:14996573-14996592 | MS.gene09224:CDS | 35.0% | |
| GAAGTTAATATTGCAGCACA+TGG | + | chr4.1:14997390-14997409 | None:intergenic | 35.0% | |
| GACAGCAGTAAAAGTAAAAG+TGG | + | chr4.1:14999032-14999051 | None:intergenic | 35.0% | |
| GATCAGGCAAAGATTGAATT+TGG | - | chr4.1:14997897-14997916 | MS.gene09224:CDS | 35.0% | |
| GCATAATCGTTCTTATGAAC+TGG | + | chr4.1:14995783-14995802 | None:intergenic | 35.0% | |
| GGAACAAGAGAACTCTAAAT+AGG | - | chr4.1:14999518-14999537 | MS.gene09224:CDS | 35.0% | |
| GGAGATTGTTCATTCTATAG+AGG | - | chr4.1:14998670-14998689 | MS.gene09224:intron | 35.0% | |
| GGATATTCAAATGCCAGAAA+TGG | - | chr4.1:14999732-14999751 | MS.gene09224:intron | 35.0% | |
| GTATCTTGTGCAAATATGAC+AGG | + | chr4.1:14995849-14995868 | None:intergenic | 35.0% | |
| GTATGGCTCAAATATATCAG+GGG | - | chr4.1:14997186-14997205 | MS.gene09224:intron | 35.0% | |
| GTTGCTTGAATCCTTTCATT+TGG | + | chr4.1:14996378-14996397 | None:intergenic | 35.0% | |
| TAAAAAGGTAGATGCATACC+TGG | + | chr4.1:14997551-14997570 | None:intergenic | 35.0% | |
| TAAAGTTGTTCGGCTTCAAA+TGG | + | chr4.1:15000268-15000287 | None:intergenic | 35.0% | |
| TAAGAACGATTATGCTGTAG+AGG | - | chr4.1:14995788-14995807 | MS.gene09224:CDS | 35.0% | |
| TATCATCACAAAACCACTCA+GGG | - | chr4.1:14999453-14999472 | MS.gene09224:CDS | 35.0% | |
| TATCTGACTAAAAGCCTGTT+TGG | + | chr4.1:14998507-14998526 | None:intergenic | 35.0% | |
| TATGGGAACAACTTATGACA+TGG | - | chr4.1:14996662-14996681 | MS.gene09224:CDS | 35.0% | |
| TCAAGACCTTAACTATCACA+AGG | + | chr4.1:14996920-14996939 | None:intergenic | 35.0% | |
| TCAAGTAAGTCAAACCAAAC+AGG | - | chr4.1:14998490-14998509 | MS.gene09224:intron | 35.0% | |
| TCACCTAAAACACCATTCAT+CGG | + | chr4.1:14997670-14997689 | None:intergenic | 35.0% | |
| TCAGGCTTCTCAAATCAAAT+CGG | - | chr4.1:14996295-14996314 | MS.gene09224:CDS | 35.0% | |
| TGAGTTTATCTGCTAGCATA+AGG | + | chr4.1:14998473-14998492 | None:intergenic | 35.0% | |
| TGGAAGATATCTCTTGTAGA+CGG | + | chr4.1:14996343-14996362 | None:intergenic | 35.0% | |
| TGTGAATCGTGATACTGTTT+GGG | - | chr4.1:14996633-14996652 | MS.gene09224:CDS | 35.0% | |
| TTCAAATGCCAGAAATGGAT+GGG | - | chr4.1:14999737-14999756 | MS.gene09224:intron | 35.0% | |
| TTGAAGCCGAACAACTTTAT+CGG | - | chr4.1:15000269-15000288 | MS.gene09224:CDS | 35.0% | |
| TTTATTTCCATGAGCTATCC+AGG | - | chr4.1:14996702-14996721 | MS.gene09224:intron | 35.0% | |
| TTTGCAAGTGAACCAAAAAC+TGG | - | chr4.1:14999004-14999023 | MS.gene09224:CDS | 35.0% | |
| ! | AACTGCATTCCCTTTGTTTA+TGG | + | chr4.1:14999257-14999276 | None:intergenic | 35.0% |
| ! | ACTTTTGCTCTAATAGGTCT+TGG | + | chr4.1:14999163-14999182 | None:intergenic | 35.0% |
| ! | ATCAAAGATTGTTCTAGGCA+AGG | - | chr4.1:14995373-14995392 | MS.gene09224:intron | 35.0% |
| ! | ATTTGAGGGTATGAATGCAT+TGG | - | chr4.1:14999129-14999148 | MS.gene09224:intron | 35.0% |
| ! | CTATTTTCTGATAAGTCCCA+AGG | - | chr4.1:14997981-14998000 | MS.gene09224:intron | 35.0% |
| ! | CTTTTGTTGACATGGGTATT+GGG | - | chr4.1:14995099-14995118 | MS.gene09224:CDS | 35.0% |
| ! | GAGAAAGCTTTTGTTGACAT+GGG | - | chr4.1:14995092-14995111 | MS.gene09224:CDS | 35.0% |
| ! | GGCTAAGAGACAAATTTTGA+AGG | + | chr4.1:14999546-14999565 | None:intergenic | 35.0% |
| ! | GTAAAAGTGGAACCAGTTTT+TGG | + | chr4.1:14999019-14999038 | None:intergenic | 35.0% |
| ! | TCATTTGGAGTTGCATTTGA+TGG | + | chr4.1:14996363-14996382 | None:intergenic | 35.0% |
| ! | TGAGACACTTTTGCTCTAAT+AGG | + | chr4.1:14999169-14999188 | None:intergenic | 35.0% |
| ! | TGTTGATATGCTTTCTGGAA+AGG | - | chr4.1:14995887-14995906 | MS.gene09224:CDS | 35.0% |
| !! | AAATGGTGGGAGAAGATTTT+AGG | - | chr4.1:14995000-14995019 | MS.gene09224:CDS | 35.0% |
| !! | AATGGTGGGAGAAGATTTTA+GGG | - | chr4.1:14995001-14995020 | MS.gene09224:CDS | 35.0% |
| !! | ATTTGATTTGAGAAGCCTGA+AGG | + | chr4.1:14996295-14996314 | None:intergenic | 35.0% |
| !! | TTTGATTTGAGAAGCCTGAA+GGG | + | chr4.1:14996294-14996313 | None:intergenic | 35.0% |
| !!! | AGTGGTTTTGTGATGATAGT+AGG | + | chr4.1:14999451-14999470 | None:intergenic | 35.0% |
| !!! | CTCATTTTTTCGATAGCACA+AGG | - | chr4.1:14999332-14999351 | MS.gene09224:intron | 35.0% |
| !!! | CTGAATATGCAGGTTTTGTT+TGG | + | chr4.1:14999108-14999127 | None:intergenic | 35.0% |
| !!! | TTCAACAGTTTTGAAGCTAC+AGG | - | chr4.1:15000100-15000119 | MS.gene09224:CDS | 35.0% |
| AAACATGGAGGAACTGGTAT+TGG | - | chr4.1:14998932-14998951 | MS.gene09224:CDS | 40.0% | |
| AAACTGCTAATAGGTGATCC+TGG | - | chr4.1:14998158-14998177 | MS.gene09224:CDS | 40.0% | |
| AAGCTTGAGCAAAGAGTGAA+CGG | + | chr4.1:14996066-14996085 | None:intergenic | 40.0% | |
| AATATTGCAGCACATGGCAA+AGG | + | chr4.1:14997384-14997403 | None:intergenic | 40.0% | |
| ACGGTTTCAGATTTGAACCA+AGG | - | chr4.1:14999223-14999242 | MS.gene09224:intron | 40.0% | |
| ACTCATCCAATTGCCATGTA+TGG | - | chr4.1:14997169-14997188 | MS.gene09224:intron | 40.0% | |
| AGCATATTCTTCCTGAAGAG+GGG | + | chr4.1:14995826-14995845 | None:intergenic | 40.0% | |
| AGCATTAGCAAGTGTTTGGT+TGG | - | chr4.1:14998959-14998978 | MS.gene09224:CDS | 40.0% | |
| AGGGAATGCAGTTATCAACA+TGG | - | chr4.1:14999264-14999283 | MS.gene09224:intron | 40.0% | |
| AGGGATGATGCATATGCTTA+TGG | - | chr4.1:14997785-14997804 | MS.gene09224:CDS | 40.0% | |
| ATACTGTTTGGGAGAGCTTA+TGG | - | chr4.1:14996644-14996663 | MS.gene09224:CDS | 40.0% | |
| ATCCAATTTCGCCATTCATG+AGG | + | chr4.1:14998985-14999004 | None:intergenic | 40.0% | |
| ATGAATGGAGTGAAGATGAG+AGG | + | chr4.1:14998887-14998906 | None:intergenic | 40.0% | |
| ATGAGAGGTTGAGATTCTCT+AGG | + | chr4.1:14998872-14998891 | None:intergenic | 40.0% | |
| ATGGAAGAGAAAGAACCAAG+TGG | + | chr4.1:14998794-14998813 | None:intergenic | 40.0% | |
| ATTAGAACTGAGGAGTCCAT+TGG | + | chr4.1:14999059-14999078 | None:intergenic | 40.0% | |
| ATTATTTGCCGAAACCTTCC+AGG | + | chr4.1:14998179-14998198 | None:intergenic | 40.0% | |
| ATTGCATACCCATCCATTTC+TGG | + | chr4.1:14999748-14999767 | None:intergenic | 40.0% | |
| ATTTGGTAAGCTAGAGCTTG+AGG | - | chr4.1:14997914-14997933 | MS.gene09224:CDS | 40.0% | |
| CAAACAGTATCACGATTCAC+AGG | + | chr4.1:14996634-14996653 | None:intergenic | 40.0% | |
| CACTCTTTGCTCAAGCTTTA+GGG | - | chr4.1:14996068-14996087 | MS.gene09224:CDS | 40.0% | |
| CATGTCAGCACTCTTAACTT+TGG | - | chr4.1:14997220-14997239 | MS.gene09224:intron | 40.0% | |
| CCCTCAAATTCTGAATATGC+AGG | + | chr4.1:14999118-14999137 | None:intergenic | 40.0% | |
| CGATTATGCTGTAGAGGAAT+TGG | - | chr4.1:14995794-14995813 | MS.gene09224:CDS | 40.0% | |
| CGGTTTCAGATTTGAACCAA+GGG | - | chr4.1:14999224-14999243 | MS.gene09224:intron | 40.0% | |
| CTACACATGAGAAATGCCTA+AGG | - | chr4.1:15000215-15000234 | MS.gene09224:CDS | 40.0% | |
| CTATCATCACAAAACCACTC+AGG | - | chr4.1:14999452-14999471 | MS.gene09224:CDS | 40.0% | |
| CTCTTAGCCATCTTCTTGTT+GGG | - | chr4.1:14999557-14999576 | MS.gene09224:CDS | 40.0% | |
| CTCTTCCCTTGTGATAGTTA+AGG | - | chr4.1:14996911-14996930 | MS.gene09224:intron | 40.0% | |
| CTGAACATTAAGAAGGACAG+AGG | + | chr4.1:14997298-14997317 | None:intergenic | 40.0% | |
| CTGTGAATCGTGATACTGTT+TGG | - | chr4.1:14996632-14996651 | MS.gene09224:CDS | 40.0% | |
| GAAATCAGAACACCGATGAA+TGG | - | chr4.1:14997655-14997674 | MS.gene09224:CDS | 40.0% | |
| GAACAATCTCCTCAACAAGA+TGG | + | chr4.1:14998661-14998680 | None:intergenic | 40.0% | |
| GACATGTCCATAAACTCTCT+AGG | + | chr4.1:14998409-14998428 | None:intergenic | 40.0% | |
| GAGCATATTCTTCCTGAAGA+GGG | + | chr4.1:14995827-14995846 | None:intergenic | 40.0% | |
| GATGACTGCAGATGTAATTC+AGG | - | chr4.1:15000192-15000211 | MS.gene09224:CDS | 40.0% | |
| GATGGAGCTTAAAAAACGTG+CGG | - | chr4.1:14997503-14997522 | MS.gene09224:CDS | 40.0% | |
| GCATCTCATGTTTCCTGAAA+GGG | + | chr4.1:14997249-14997268 | None:intergenic | 40.0% | |
| GGATCACCTATTAGCAGTTT+AGG | + | chr4.1:14998158-14998177 | None:intergenic | 40.0% | |
| GGGTGTCAACCATAAACAAA+GGG | - | chr4.1:14999245-14999264 | MS.gene09224:intron | 40.0% | |
| GGTGAGTTCTCTAATGTCTA+TGG | - | chr4.1:14997685-14997704 | MS.gene09224:intron | 40.0% | |
| GGTTTCAGATTTGAACCAAG+GGG | - | chr4.1:14999225-14999244 | MS.gene09224:intron | 40.0% | |
| GTTTACAAGCTACTGAGAAG+AGG | - | chr4.1:14995160-14995179 | MS.gene09224:CDS | 40.0% | |
| GTTTGAACCTGGGTAAGAAT+CGG | + | chr4.1:14997353-14997372 | None:intergenic | 40.0% | |
| TACAGCGAGAGATGAATGTT+AGG | - | chr4.1:14999497-14999516 | MS.gene09224:CDS | 40.0% | |
| TACAGGTAGAATCAGAGAGA+TGG | - | chr4.1:15000117-15000136 | MS.gene09224:CDS | 40.0% | |
| TACTGTTTGGGAGAGCTTAT+GGG | - | chr4.1:14996645-14996664 | MS.gene09224:CDS | 40.0% | |
| TCACTCTTTGCTCAAGCTTT+AGG | - | chr4.1:14996067-14996086 | MS.gene09224:CDS | 40.0% | |
| TCGAGTCAGATAGGACTATA+TGG | - | chr4.1:14996153-14996172 | MS.gene09224:CDS | 40.0% | |
| TCTCATGGGCAACTCAATTA+AGG | - | chr4.1:14998205-14998224 | MS.gene09224:CDS | 40.0% | |
| TCTCTTAGCCATCTTCTTGT+TGG | - | chr4.1:14999556-14999575 | MS.gene09224:CDS | 40.0% | |
| TCTGATAAGTCCCAAGGAAA+AGG | - | chr4.1:14997987-14998006 | MS.gene09224:intron | 40.0% | |
| TCTGATTTCATGGGAAACAG+TGG | + | chr4.1:14997644-14997663 | None:intergenic | 40.0% | |
| TCTGCAAGAGTCGAATTGAT+CGG | + | chr4.1:14995416-14995435 | None:intergenic | 40.0% | |
| TCTGCAGTCATCGCTAAAAT+CGG | + | chr4.1:15000184-15000203 | None:intergenic | 40.0% | |
| TCTGTTGAAGATACAGGTGA+CGG | - | chr4.1:14998842-14998861 | MS.gene09224:intron | 40.0% | |
| TCTTACAACTCTGTCACACA+TGG | - | chr4.1:14995458-14995477 | MS.gene09224:intron | 40.0% | |
| TCTTGTAGACGGCAAATGTA+AGG | + | chr4.1:14996332-14996351 | None:intergenic | 40.0% | |
| TGAAGCCGAACAACTTTATC+GGG | - | chr4.1:15000270-15000289 | MS.gene09224:CDS | 40.0% | |
| TGCATCTCATGTTTCCTGAA+AGG | + | chr4.1:14997250-14997269 | None:intergenic | 40.0% | |
| TGCTAAACAGGTATCTTGGT+GGG | - | chr4.1:14997053-14997072 | MS.gene09224:intron | 40.0% | |
| TGCTAGCATGTGTGATGAAA+GGG | - | chr4.1:14995194-14995213 | MS.gene09224:intron | 40.0% | |
| TGTCGTGTACGATGTCATAT+TGG | - | chr4.1:14995533-14995552 | MS.gene09224:intron | 40.0% | |
| TGTCTCTACAGTTGTACACA+AGG | + | chr4.1:14996127-14996146 | None:intergenic | 40.0% | |
| TGTGACTATCCATCTTGTTG+AGG | - | chr4.1:14998649-14998668 | MS.gene09224:intron | 40.0% | |
| TTCAAGGCTTTCAGTCAAGA+TGG | - | chr4.1:14998767-14998786 | MS.gene09224:intron | 40.0% | |
| TTCACTCCATTCATGCAAGT+AGG | - | chr4.1:14998893-14998912 | MS.gene09224:intron | 40.0% | |
| TTGCACGCAACACATTATCA+CGG | + | chr4.1:14996242-14996261 | None:intergenic | 40.0% | |
| TTGCTAAACAGGTATCTTGG+TGG | - | chr4.1:14997052-14997071 | MS.gene09224:intron | 40.0% | |
| TTGCTAGCATGTGTGATGAA+AGG | - | chr4.1:14995193-14995212 | MS.gene09224:intron | 40.0% | |
| TTGTGAAAAGTTGCCTGAGT+TGG | - | chr4.1:14998738-14998757 | MS.gene09224:intron | 40.0% | |
| TTTAAGTCCGATTCTTACCC+AGG | - | chr4.1:14997343-14997362 | MS.gene09224:CDS | 40.0% | |
| TTTGAGCCATACATGGCAAT+TGG | + | chr4.1:14997178-14997197 | None:intergenic | 40.0% | |
| ! | AAAAGTTGCCTGAGTTGGAA+AGG | - | chr4.1:14998743-14998762 | MS.gene09224:intron | 40.0% |
| ! | AACGGATTCAGATTATCACC+AGG | + | chr4.1:14996048-14996067 | None:intergenic | 40.0% |
| ! | ACACCGATGAATGGTGTTTT+AGG | - | chr4.1:14997664-14997683 | MS.gene09224:intron | 40.0% |
| ! | CAGAAAGAACAGCTTTTGAG+AGG | - | chr4.1:14995646-14995665 | MS.gene09224:CDS | 40.0% |
| ! | CATCGGTGTTCTGATTTCAT+GGG | + | chr4.1:14997653-14997672 | None:intergenic | 40.0% |
| ! | CATGTCACTTAGGCAATGTT+TGG | - | chr4.1:14998248-14998267 | MS.gene09224:intron | 40.0% |
| ! | GAAAAAGTATGGAGCAGATG+TGG | - | chr4.1:14999639-14999658 | MS.gene09224:CDS | 40.0% |
| ! | GAATGGAGTGTTTAGTTGCT+TGG | + | chr4.1:14996523-14996542 | None:intergenic | 40.0% |
| ! | GATATGCTTTCTGGAAAGGT+AGG | - | chr4.1:14995891-14995910 | MS.gene09224:CDS | 40.0% |
| ! | GCTTTTGTTGACATGGGTAT+TGG | - | chr4.1:14995098-14995117 | MS.gene09224:CDS | 40.0% |
| ! | GGAGAAAGCTTTTGTTGACA+TGG | - | chr4.1:14995091-14995110 | MS.gene09224:CDS | 40.0% |
| ! | GTTTTGCAGTTCACAGACAA+AGG | - | chr4.1:14998617-14998636 | MS.gene09224:intron | 40.0% |
| ! | TACCAGTTCCTCCATGTTTT+CGG | + | chr4.1:14998931-14998950 | None:intergenic | 40.0% |
| ! | TATAGTTTAGCTTACGCCTC+TGG | - | chr4.1:14996467-14996486 | MS.gene09224:CDS | 40.0% |
| ! | TCAGGCAACTTTTCACAACA+GGG | + | chr4.1:14998736-14998755 | None:intergenic | 40.0% |
| ! | TCATCGGTGTTCTGATTTCA+TGG | + | chr4.1:14997654-14997673 | None:intergenic | 40.0% |
| ! | TTAACTTTGGTGACCCTTTC+AGG | - | chr4.1:14997233-14997252 | MS.gene09224:intron | 40.0% |
| ! | TTTTCCTCCCAACAAGAAGA+TGG | + | chr4.1:14999567-14999586 | None:intergenic | 40.0% |
| ! | TTTTGCAATTCGATTCACGG+TGG | + | chr4.1:14997460-14997479 | None:intergenic | 40.0% |
| !! | CTTGTTATTGCTCTCCTTGT+TGG | - | chr4.1:14997420-14997439 | MS.gene09224:CDS | 40.0% |
| !! | GCTGGTGCTTTGAAAAAGTA+TGG | - | chr4.1:14999628-14999647 | MS.gene09224:CDS | 40.0% |
| !! | TGGGAGAAGATTTTAGGGAA+TGG | - | chr4.1:14995006-14995025 | MS.gene09224:CDS | 40.0% |
| AAACATGCGTCGAACTGATG+AGG | + | chr4.1:14999709-14999728 | None:intergenic | 45.0% | |
| AAGTACCTGATCAATGGCTG+AGG | + | chr4.1:14995310-14995329 | None:intergenic | 45.0% | |
| AGAGAGTGAAGAGAGAGTTG+TGG | - | chr4.1:14995070-14995089 | MS.gene09224:CDS | 45.0% | |
| AGCACAAGGAAAATCAGCCA+CGG | - | chr4.1:14999346-14999365 | MS.gene09224:intron | 45.0% | |
| AGCAGATGTTGCAAAATCCC+AGG | - | chr4.1:14997530-14997549 | MS.gene09224:intron | 45.0% | |
| AGTACCTGATCAATGGCTGA+GGG | + | chr4.1:14995309-14995328 | None:intergenic | 45.0% | |
| CAAGTCCGTGTAATTAGTGC+AGG | + | chr4.1:14997597-14997616 | None:intergenic | 45.0% | |
| CAATATCACATCCAACGCCT+TGG | - | chr4.1:14999187-14999206 | MS.gene09224:intron | 45.0% | |
| CAATTCGACTCTTGCAGATC+AGG | - | chr4.1:14995418-14995437 | MS.gene09224:intron | 45.0% | |
| CATGAGAAATGCCTAAGGTG+TGG | - | chr4.1:15000220-15000239 | MS.gene09224:CDS | 45.0% | |
| CCTTGAATCCTTTCCAACTC+AGG | + | chr4.1:14998754-14998773 | None:intergenic | 45.0% | |
| CCTTGGCATTCACGTTGAAA+CGG | - | chr4.1:14999204-14999223 | MS.gene09224:intron | 45.0% | |
| CTGCAAGAGTCGAATTGATC+GGG | + | chr4.1:14995415-14995434 | None:intergenic | 45.0% | |
| GAAATGCCTAAGGTGTGGAA+TGG | - | chr4.1:15000225-15000244 | MS.gene09224:CDS | 45.0% | |
| GACGAACCTACTTGCATGAA+TGG | + | chr4.1:14998902-14998921 | None:intergenic | 45.0% | |
| GCTAAACAGGTATCTTGGTG+GGG | - | chr4.1:14997054-14997073 | MS.gene09224:intron | 45.0% | |
| GGAAACATGAGATGCATTGC+AGG | - | chr4.1:14997254-14997273 | MS.gene09224:intron | 45.0% | |
| GGAATATGTCAGAACAGCAC+AGG | - | chr4.1:14997833-14997852 | MS.gene09224:CDS | 45.0% | |
| GGAGCATATTCTTCCTGAAG+AGG | + | chr4.1:14995828-14995847 | None:intergenic | 45.0% | |
| GTGCAAGAGAATCAGGCAAA+GGG | - | chr4.1:14996256-14996275 | MS.gene09224:CDS | 45.0% | |
| GTTGGACTGTAGTGTCTTTG+TGG | - | chr4.1:14995121-14995140 | MS.gene09224:CDS | 45.0% | |
| TAGGTGATCCTGGAAGGTTT+CGG | - | chr4.1:14998168-14998187 | MS.gene09224:CDS | 45.0% | |
| TATTCTTCCTGAAGAGGGGA+TGG | + | chr4.1:14995822-14995841 | None:intergenic | 45.0% | |
| TCAGTTCGACGCATGTTTCA+TGG | - | chr4.1:14999711-14999730 | MS.gene09224:intron | 45.0% | |
| TGAAAGGGCTAGGATTGTTC+AGG | - | chr4.1:14995209-14995228 | MS.gene09224:intron | 45.0% | |
| TGCAAGAGAATCAGGCAAAG+GGG | - | chr4.1:14996257-14996276 | MS.gene09224:CDS | 45.0% | |
| TGCTAATAGGTGATCCTGGA+AGG | - | chr4.1:14998162-14998181 | MS.gene09224:CDS | 45.0% | |
| TGTTTATGGTTGACACCCCT+TGG | + | chr4.1:14999243-14999262 | None:intergenic | 45.0% | |
| TTAGCCATCTTCTTGTTGGG+AGG | - | chr4.1:14999560-14999579 | MS.gene09224:CDS | 45.0% | |
| TTCAGTCAAGATGGACCACT+TGG | - | chr4.1:14998776-14998795 | MS.gene09224:intron | 45.0% | |
| TTTACTGCTGTCTTCGCCAA+TGG | - | chr4.1:14999040-14999059 | MS.gene09224:CDS | 45.0% | |
| TTTGAGAGGCCTCTAACAAG+TGG | - | chr4.1:14995660-14995679 | MS.gene09224:CDS | 45.0% | |
| ! | ACAACTTTGGAGGAAAACCG+TGG | + | chr4.1:14999366-14999385 | None:intergenic | 45.0% |
| ! | ACCAGTTCCTCCATGTTTTC+GGG | + | chr4.1:14998930-14998949 | None:intergenic | 45.0% |
| ! | CCTGAGTTGGAAAGGATTCA+AGG | - | chr4.1:14998751-14998770 | MS.gene09224:intron | 45.0% |
| ! | CTCAGGCAACTTTTCACAAC+AGG | + | chr4.1:14998737-14998756 | None:intergenic | 45.0% |
| ! | GATGTGGTTTGTGTTAGCAG+TGG | - | chr4.1:14999655-14999674 | MS.gene09224:CDS | 45.0% |
| ! | GGGGTGTCAACCATAAACAA+AGG | - | chr4.1:14999244-14999263 | MS.gene09224:intron | 45.0% |
| ! | TACCTCGACTCCTTTTCCTT+GGG | + | chr4.1:14998000-14998019 | None:intergenic | 45.0% |
| ! | TATGCCACACCACTTGTTAG+AGG | + | chr4.1:14995672-14995691 | None:intergenic | 45.0% |
| ! | TTACCTCGACTCCTTTTCCT+TGG | + | chr4.1:14998001-14998020 | None:intergenic | 45.0% |
| !! | TGTTGACATGGGTATTGGGT+TGG | - | chr4.1:14995103-14995122 | MS.gene09224:CDS | 45.0% |
| !! | TGTTTGGTTGGCCTCATGAA+TGG | - | chr4.1:14998971-14998990 | MS.gene09224:CDS | 45.0% |
| !! | ATTTATTAAACAAATTAAAA+AGG | + | chr4.1:14997566-14997585 | None:intergenic | 5.0% |
| !!! | TTTTAATTTGTTTAATAAAT+TGG | - | chr4.1:14997566-14997585 | MS.gene09224:intron | 5.0% |
| AAGCTGTCCTGGATAGCTCA+TGG | + | chr4.1:14996712-14996731 | None:intergenic | 50.0% | |
| ACCCATCCATTCCACACCTT+AGG | + | chr4.1:15000234-15000253 | None:intergenic | 50.0% | |
| ACGACACTGACACGTCAACA+CGG | + | chr4.1:14995519-14995538 | None:intergenic | 50.0% | |
| AGGCGGTTTCTGTTTGAACC+TGG | + | chr4.1:14997364-14997383 | None:intergenic | 50.0% | |
| ATTGCAGCACATGGCAAAGG+CGG | + | chr4.1:14997381-14997400 | None:intergenic | 50.0% | |
| CCGTTTCAACGTGAATGCCA+AGG | + | chr4.1:14999207-14999226 | None:intergenic | 50.0% | |
| CGTGCAAGAGAATCAGGCAA+AGG | - | chr4.1:14996255-14996274 | MS.gene09224:CDS | 50.0% | |
| GCATGTGTGATGAAAGGGCT+AGG | - | chr4.1:14995199-14995218 | MS.gene09224:intron | 50.0% | |
| GCCTAAGGTGTGGAATGGAT+GGG | - | chr4.1:15000230-15000249 | MS.gene09224:CDS | 50.0% | |
| GGAGCTTAAAAAACGTGCGG+AGG | - | chr4.1:14997506-14997525 | MS.gene09224:CDS | 50.0% | |
| GGCCTCATGAATGGCGAAAT+TGG | - | chr4.1:14998980-14998999 | MS.gene09224:CDS | 50.0% | |
| GGCGGTTTCTGTTTGAACCT+GGG | + | chr4.1:14997363-14997382 | None:intergenic | 50.0% | |
| GTCAGAACAGCACAGGAAAG+TGG | - | chr4.1:14997840-14997859 | MS.gene09224:CDS | 50.0% | |
| GTGTTGCGTGCAAGAGAATC+AGG | - | chr4.1:14996249-14996268 | MS.gene09224:CDS | 50.0% | |
| TCCCGAAAACATGGAGGAAC+TGG | - | chr4.1:14998926-14998945 | MS.gene09224:CDS | 50.0% | |
| TCGATCTCCCGAAAACATGG+AGG | - | chr4.1:14998920-14998939 | MS.gene09224:CDS | 50.0% | |
| TCGTCGATCTCCCGAAAACA+TGG | - | chr4.1:14998917-14998936 | MS.gene09224:CDS | 50.0% | |
| TCTAGGCAAGGTTCGAAAGC+CGG | - | chr4.1:14995385-14995404 | MS.gene09224:intron | 50.0% | |
| TGCCTAAGGTGTGGAATGGA+TGG | - | chr4.1:15000229-15000248 | MS.gene09224:CDS | 50.0% | |
| ! | GTCGAATTGATCGGGAGTAC+CGG | + | chr4.1:14995407-14995426 | None:intergenic | 50.0% |
| !!! | GGGTTTTAACTGCACCCTTC+AGG | - | chr4.1:14996277-14996296 | MS.gene09224:CDS | 50.0% |
| ATTGGAGCCATCCCCTCTTC+AGG | - | chr4.1:14995812-14995831 | MS.gene09224:CDS | 55.0% | |
| CAACGTGAATGCCAAGGCGT+TGG | + | chr4.1:14999201-14999220 | None:intergenic | 55.0% | |
| CATGCGTCGAACTGATGAGG+TGG | + | chr4.1:14999706-14999725 | None:intergenic | 55.0% | |
| CGACACTGACACGTCAACAC+GGG | + | chr4.1:14995518-14995537 | None:intergenic | 55.0% | |
| GAGGCCTCTAACAAGTGGTG+TGG | - | chr4.1:14995665-14995684 | MS.gene09224:CDS | 55.0% | |
| GAGTCCCTCAGCCATTGATC+AGG | - | chr4.1:14995302-14995321 | MS.gene09224:intron | 55.0% | |
| GTCCCAAGGAAAAGGAGTCG+AGG | - | chr4.1:14997995-14998014 | MS.gene09224:intron | 55.0% | |
| GTGAATCGTGCAGTAGCAGC+TGG | - | chr4.1:14999610-14999629 | MS.gene09224:CDS | 55.0% | |
| GCAAGCATGCTTGCCCTGAG+TGG | + | chr4.1:14999469-14999488 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 14994991 | 15000321 | 14994991 | ID=MS.gene09224 |
| chr4.1 | mRNA | 14994991 | 15000321 | 14994991 | ID=MS.gene09224.t1;Parent=MS.gene09224 |
| chr4.1 | exon | 14999989 | 15000321 | 14999989 | ID=MS.gene09224.t1.exon1;Parent=MS.gene09224.t1 |
| chr4.1 | CDS | 14999989 | 15000321 | 14999989 | ID=cds.MS.gene09224.t1;Parent=MS.gene09224.t1 |
| chr4.1 | exon | 14999404 | 14999685 | 14999404 | ID=MS.gene09224.t1.exon2;Parent=MS.gene09224.t1 |
| chr4.1 | CDS | 14999404 | 14999685 | 14999404 | ID=cds.MS.gene09224.t1;Parent=MS.gene09224.t1 |
| chr4.1 | exon | 14998909 | 14999078 | 14998909 | ID=MS.gene09224.t1.exon3;Parent=MS.gene09224.t1 |
| chr4.1 | CDS | 14998909 | 14999078 | 14998909 | ID=cds.MS.gene09224.t1;Parent=MS.gene09224.t1 |
| chr4.1 | exon | 14998037 | 14998249 | 14998037 | ID=MS.gene09224.t1.exon4;Parent=MS.gene09224.t1 |
| chr4.1 | CDS | 14998037 | 14998249 | 14998037 | ID=cds.MS.gene09224.t1;Parent=MS.gene09224.t1 |
| chr4.1 | exon | 14997761 | 14997947 | 14997761 | ID=MS.gene09224.t1.exon5;Parent=MS.gene09224.t1 |
| chr4.1 | CDS | 14997761 | 14997947 | 14997761 | ID=cds.MS.gene09224.t1;Parent=MS.gene09224.t1 |
| chr4.1 | exon | 14997627 | 14997678 | 14997627 | ID=MS.gene09224.t1.exon6;Parent=MS.gene09224.t1 |
| chr4.1 | CDS | 14997627 | 14997678 | 14997627 | ID=cds.MS.gene09224.t1;Parent=MS.gene09224.t1 |
| chr4.1 | exon | 14997296 | 14997525 | 14997296 | ID=MS.gene09224.t1.exon7;Parent=MS.gene09224.t1 |
| chr4.1 | CDS | 14997296 | 14997525 | 14997296 | ID=cds.MS.gene09224.t1;Parent=MS.gene09224.t1 |
| chr4.1 | exon | 14997086 | 14997184 | 14997086 | ID=MS.gene09224.t1.exon8;Parent=MS.gene09224.t1 |
| chr4.1 | CDS | 14997086 | 14997184 | 14997086 | ID=cds.MS.gene09224.t1;Parent=MS.gene09224.t1 |
| chr4.1 | exon | 14995554 | 14996686 | 14995554 | ID=MS.gene09224.t1.exon9;Parent=MS.gene09224.t1 |
| chr4.1 | CDS | 14995554 | 14996686 | 14995554 | ID=cds.MS.gene09224.t1;Parent=MS.gene09224.t1 |
| chr4.1 | exon | 14994991 | 14995204 | 14994991 | ID=MS.gene09224.t1.exon10;Parent=MS.gene09224.t1 |
| chr4.1 | CDS | 14994991 | 14995204 | 14994991 | ID=cds.MS.gene09224.t1;Parent=MS.gene09224.t1 |
| Gene Sequence |
| Protein sequence |
