AlfalfaGEDB | MS.gene21410

M. sativa cultivar XinJiangDaYe / MS.gene21410

KEGG: K07910
GO: GO:0000166 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0097159 GO:0097367 GO:1901265 GO:1901363
PFAM: PF00071.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21410.t1	XP_013469277.1	95.1	142	7	0	5	146	71	212	1.80E-71	278.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21410.t1	O49841	66.7	144	46	1	5	146	67	210	3.9e-51	202.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21410.t1	B7FF73	95.1	142	7	0	5	146	71	212	1.3e-71	278.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049159	MS.gene21410	0.820556	6.45E-53	-1.69E-46
MS.gene049283	MS.gene21410	0.817379	3.40E-52	-1.69E-46
MS.gene049424	MS.gene21410	0.800052	1.73E-48	-1.69E-46
MS.gene049983	MS.gene21410	0.808691	2.74E-50	-1.69E-46
MS.gene050559	MS.gene21410	0.808079	3.69E-50	-1.69E-46
MS.gene050561	MS.gene21410	0.803296	3.73E-49	-1.69E-46
MS.gene051198	MS.gene21410	0.800631	1.32E-48	-1.69E-46
MS.gene051368	MS.gene21410	0.81444	1.54E-51	-1.69E-46
MS.gene051597	MS.gene21410	0.814545	1.46E-51	-1.69E-46
MS.gene052500	MS.gene21410	0.808538	2.95E-50	-1.69E-46
MS.gene052502	MS.gene21410	0.805836	1.10E-49	-1.69E-46
MS.gene052826	MS.gene21410	0.809911	1.50E-50	-1.69E-46
MS.gene052954	MS.gene21410	0.837977	3.78E-57	-1.69E-46
MS.gene05308	MS.gene21410	0.804806	1.81E-49	-1.69E-46
MS.gene05364	MS.gene21410	0.805596	1.24E-49	-1.69E-46
MS.gene053931	MS.gene21410	0.869273	3.50E-66	-1.69E-46
MS.gene054651	MS.gene21410	0.820229	7.66E-53	-1.69E-46
MS.gene054657	MS.gene21410	0.81692	4.31E-52	-1.69E-46
MS.gene055222	MS.gene21410	0.804395	2.21E-49	-1.69E-46
MS.gene055841	MS.gene21410	0.827908	1.21E-54	-1.69E-46
MS.gene05686	MS.gene21410	0.800082	1.70E-48	-1.69E-46
MS.gene057060	MS.gene21410	0.800212	1.60E-48	-1.69E-46
MS.gene057208	MS.gene21410	0.838796	2.32E-57	-1.69E-46
MS.gene057392	MS.gene21410	0.830295	3.18E-55	-1.69E-46
MS.gene057693	MS.gene21410	0.80237	5.79E-49	-1.69E-46
MS.gene058009	MS.gene21410	0.822239	2.63E-53	-1.69E-46
MS.gene058010	MS.gene21410	0.807897	4.04E-50	-1.69E-46
MS.gene058548	MS.gene21410	0.807639	4.58E-50	-1.69E-46
MS.gene058781	MS.gene21410	0.823944	1.05E-53	-1.69E-46
MS.gene058783	MS.gene21410	0.827989	1.15E-54	-1.69E-46
MS.gene059317	MS.gene21410	0.800792	1.22E-48	-1.69E-46
MS.gene059842	MS.gene21410	0.81535	9.67E-52	-1.69E-46
MS.gene060310	MS.gene21410	0.855273	7.05E-62	-1.69E-46
MS.gene060935	MS.gene21410	0.801669	8.07E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21410.t1	MTR_1g090717	92.466	146	11	0	1	146	67	212	2.35e-99	284
MS.gene21410.t1	MTR_7g103070	65.541	148	49	1	1	146	11	158	4.39e-68	203
MS.gene21410.t1	MTR_1g062760	67.347	147	46	1	1	145	64	210	2.48e-67	203
MS.gene21410.t1	MTR_7g103070	65.541	148	49	1	1	146	67	214	3.11e-67	203
MS.gene21410.t1	MTR_1g029450	60.135	148	57	1	1	146	67	214	2.00e-59	183
MS.gene21410.t1	MTR_8g093740	59.589	146	58	1	1	145	30	175	3.55e-59	181
MS.gene21410.t1	MTR_8g093740	59.589	146	58	1	1	145	63	208	3.94e-59	182
MS.gene21410.t1	MTR_3g096350	59.732	149	53	2	1	145	62	207	1.42e-58	181
MS.gene21410.t1	MTR_3g096350	64.935	77	25	1	1	75	62	138	1.00e-30	108
MS.gene21410.t1	MTR_3g096350	69.565	69	21	0	1	69	62	130	1.72e-30	107
MS.gene21410.t1	MTR_4g099470	40.845	142	81	3	5	146	39	177	3.43e-29	105
MS.gene21410.t1	MTR_7g081700	42.254	142	79	3	5	146	63	201	3.59e-29	105
MS.gene21410.t1	MTR_1g115325	39.456	147	81	5	5	145	70	214	1.60e-27	102
MS.gene21410.t1	MTR_2g096550	39.583	144	83	4	5	145	70	212	4.70e-27	100
MS.gene21410.t1	MTR_8g006970	38.732	142	85	2	5	146	77	216	1.47e-26	99.4
MS.gene21410.t1	MTR_1g068740	39.456	147	81	5	5	145	70	214	1.50e-26	99.4
MS.gene21410.t1	MTR_6g021790	46.847	111	57	2	5	115	61	169	1.97e-26	99.0
MS.gene21410.t1	MTR_1g068730	39.456	147	81	5	5	145	70	214	2.28e-26	99.0
MS.gene21410.t1	MTR_8g031870	47.059	102	52	2	5	106	61	160	1.04e-25	96.7
MS.gene21410.t1	MTR_2g005500	39.716	141	83	2	5	145	64	202	1.27e-25	96.7
MS.gene21410.t1	MTR_4g063160	37.162	148	84	5	5	145	70	215	9.05e-25	94.7
MS.gene21410.t1	MTR_7g100020	40.000	130	71	4	5	129	70	197	1.42e-24	94.4
MS.gene21410.t1	MTR_8g006970	44.037	109	59	2	5	113	63	169	3.55e-24	92.4
MS.gene21410.t1	MTR_2g027660	46.078	102	53	2	5	106	61	160	5.05e-24	92.8
MS.gene21410.t1	MTR_1g078200	36.943	157	82	4	5	146	69	223	5.73e-24	92.8
MS.gene21410.t1	MTR_8g031660	47.059	102	52	2	5	106	61	160	6.11e-24	92.4
MS.gene21410.t1	MTR_8g031830	44.000	100	54	2	5	104	61	158	1.07e-22	89.0
MS.gene21410.t1	MTR_8g031680	44.118	102	55	2	5	106	61	160	1.32e-22	89.0
MS.gene21410.t1	MTR_2g014990	35.714	154	82	5	5	146	68	216	4.38e-22	87.8
MS.gene21410.t1	MTR_2g075950	36.424	151	85	4	5	146	68	216	5.30e-22	87.8
MS.gene21410.t1	MTR_3g087160	37.671	146	87	3	3	146	62	205	6.76e-22	87.0
MS.gene21410.t1	MTR_7g051940	41.538	130	64	4	5	125	68	194	1.34e-21	86.7
MS.gene21410.t1	MTR_6g079550	42.105	114	64	2	5	118	67	178	1.96e-21	86.3
MS.gene21410.t1	MTR_4g064897	37.719	114	69	2	5	118	67	178	2.62e-21	85.9
MS.gene21410.t1	MTR_5g076590	34.266	143	86	4	5	146	65	200	6.14e-21	84.7
MS.gene21410.t1	MTR_4g098950	35.616	146	89	3	3	145	62	205	8.60e-21	84.3
MS.gene21410.t1	MTR_8g090215	37.415	147	87	4	3	146	62	206	1.59e-20	83.6
MS.gene21410.t1	MTR_8g103550	33.803	142	87	4	5	146	64	198	1.67e-20	83.2
MS.gene21410.t1	MTR_1g094220	38.095	105	63	2	5	109	87	189	1.68e-20	83.6
MS.gene21410.t1	MTR_4g088090	34.416	154	84	5	5	146	68	216	1.86e-20	83.6
MS.gene21410.t1	MTR_4g079350	41.228	114	65	2	5	118	68	179	1.98e-20	83.6
MS.gene21410.t1	MTR_1g094220	37.391	115	69	3	5	119	87	198	2.14e-20	83.2
MS.gene21410.t1	MTR_3g064390	32.867	143	88	4	5	146	65	200	3.44e-20	82.4
MS.gene21410.t1	MTR_2g090865	36.667	150	85	4	5	146	66	213	4.21e-20	82.8
MS.gene21410.t1	MTR_3g069510	37.719	114	69	2	5	118	67	178	6.55e-20	82.4
MS.gene21410.t1	MTR_2g083860	38.596	114	68	2	5	118	68	179	9.05e-20	82.0
MS.gene21410.t1	MTR_3g086980	36.607	112	69	2	5	116	71	180	1.37e-19	81.6
MS.gene21410.t1	MTR_8g089985	37.500	112	68	2	5	116	72	181	3.02e-19	80.5
MS.gene21410.t1	MTR_7g405790	37.984	129	70	3	5	125	70	196	3.23e-19	80.5
MS.gene21410.t1	MTR_1g094220	37.069	116	69	3	5	118	87	200	5.67e-19	80.1
MS.gene21410.t1	MTR_1g094220	37.864	103	62	2	5	107	87	187	5.90e-19	79.7
MS.gene21410.t1	MTR_5g013900	41.667	108	61	2	3	110	62	167	1.31e-18	78.6
MS.gene21410.t1	MTR_0262s0050	35.714	112	70	2	5	116	70	179	3.26e-18	77.8
MS.gene21410.t1	MTR_8g027220	38.211	123	69	4	5	126	81	197	4.70e-18	77.8
MS.gene21410.t1	MTR_2g005510	38.835	103	61	2	5	107	70	170	5.16e-18	77.4
MS.gene21410.t1	MTR_8g036220	39.216	102	60	2	5	106	71	170	5.18e-18	77.4
MS.gene21410.t1	MTR_2g102060	34.862	109	69	2	5	113	65	171	8.27e-18	76.3
MS.gene21410.t1	MTR_1g052475	31.646	158	86	5	5	145	70	222	1.99e-17	75.9
MS.gene21410.t1	MTR_8g107070	38.793	116	69	2	5	120	69	182	3.29e-15	70.5
MS.gene21410.t1	MTR_1g068730	37.363	91	54	3	5	94	70	158	3.63e-13	63.5
MS.gene21410.t1	MTR_1g068740	40.506	79	45	2	5	83	70	146	5.47e-13	63.5
MS.gene21410.t1	MTR_4g069850	31.655	139	85	5	5	134	63	200	9.06e-12	60.5
MS.gene21410.t1	MTR_7g117910	41.333	75	42	2	5	79	75	147	1.15e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21410.t1	AT5G03530	64.865	148	50	1	1	146	63	210	5.00e-68	205
MS.gene21410.t1	AT5G03530	64.865	148	50	1	1	146	63	210	5.00e-68	205
MS.gene21410.t1	AT3G09910	61.644	146	52	1	1	146	63	204	1.01e-61	189
MS.gene21410.t1	AT3G09910	61.644	146	52	1	1	146	63	204	1.01e-61	189
MS.gene21410.t1	AT3G09910	61.644	146	52	1	1	146	63	204	1.01e-61	189
MS.gene21410.t1	AT1G43890	70.161	124	37	0	1	124	63	186	8.22e-61	186
MS.gene21410.t1	AT1G43890	70.161	124	37	0	1	124	63	186	8.22e-61	186
MS.gene21410.t1	AT1G43890	70.161	124	37	0	1	124	63	186	8.22e-61	186
MS.gene21410.t1	AT3G09910	64.602	113	40	0	1	113	63	175	1.57e-51	162
MS.gene21410.t1	AT3G09910	64.602	113	40	0	1	113	63	175	1.57e-51	162
MS.gene21410.t1	AT1G02130	42.254	142	80	2	5	146	63	202	1.31e-30	109
MS.gene21410.t1	AT5G03520	40.136	147	81	4	5	146	60	204	2.25e-29	106
MS.gene21410.t1	AT5G03520	40.136	147	81	4	5	146	70	214	2.51e-29	106
MS.gene21410.t1	AT4G35860	40.132	152	78	4	5	145	15	164	3.57e-29	104
MS.gene21410.t1	AT3G09900	40.268	149	80	5	5	146	70	216	4.27e-29	106
MS.gene21410.t1	AT4G35860	40.132	152	78	4	5	145	61	210	1.56e-28	104
MS.gene21410.t1	AT5G59840	39.456	147	81	5	5	145	70	214	5.85e-28	103
MS.gene21410.t1	AT5G47200	40.845	142	81	3	5	146	63	201	1.74e-27	101
MS.gene21410.t1	AT4G17530	40.845	142	81	3	5	146	63	201	4.02e-27	100
MS.gene21410.t1	AT3G53610	38.776	147	82	5	5	145	70	214	4.74e-27	100
MS.gene21410.t1	AT3G53610	38.776	147	82	5	5	145	70	214	4.74e-27	100
MS.gene21410.t1	AT3G53610	38.776	147	82	5	5	145	70	214	4.74e-27	100
MS.gene21410.t1	AT3G46060	38.095	147	83	5	5	145	70	214	2.24e-26	99.0
MS.gene21410.t1	AT3G46060	38.095	147	83	5	5	145	70	214	2.24e-26	99.0
MS.gene21410.t1	AT3G46060	38.095	147	83	5	5	145	70	214	2.24e-26	99.0
MS.gene21410.t1	AT3G11730	40.541	148	74	4	5	145	63	203	2.51e-26	98.6
MS.gene21410.t1	AT4G17170	38.816	152	80	4	5	145	61	210	2.64e-26	99.0
MS.gene21410.t1	AT4G17160	39.456	147	80	4	5	145	61	204	1.06e-25	97.1
MS.gene21410.t1	AT5G47520	36.364	154	84	3	5	146	69	220	7.35e-25	95.1
MS.gene21410.t1	AT1G05810	47.706	109	55	2	5	113	67	173	1.42e-24	94.4
MS.gene21410.t1	AT1G05810	47.706	109	55	2	5	113	113	219	3.14e-24	94.7
MS.gene21410.t1	AT2G43130	40.000	150	79	4	5	146	67	213	1.57e-23	91.7
MS.gene21410.t1	AT2G31680	47.573	103	52	2	5	107	67	167	6.40e-23	90.1
MS.gene21410.t1	AT1G18200	42.857	112	62	2	5	116	68	177	5.45e-22	88.2
MS.gene21410.t1	AT1G16920	36.000	150	86	4	5	146	68	215	1.27e-21	86.7
MS.gene21410.t1	AT3G07410	38.816	152	81	5	5	146	67	216	1.33e-21	86.7
MS.gene21410.t1	AT5G45750	36.667	150	85	4	5	146	68	215	1.53e-21	86.7
MS.gene21410.t1	AT4G39990	40.367	109	63	2	5	113	72	178	1.94e-21	86.3
MS.gene21410.t1	AT3G54840	40.000	105	61	2	5	109	55	157	2.17e-21	85.1
MS.gene21410.t1	AT1G73640	41.379	116	66	2	5	120	68	181	3.41e-21	85.9
MS.gene21410.t1	AT3G54840	40.000	105	61	2	5	109	89	191	4.62e-21	85.1
MS.gene21410.t1	AT1G28550	42.105	114	64	2	5	118	68	179	5.79e-21	85.1
MS.gene21410.t1	AT4G18800	35.135	148	88	3	5	146	68	213	6.62e-21	84.7
MS.gene21410.t1	AT3G15060	42.105	114	64	2	5	118	68	179	8.69e-21	84.7
MS.gene21410.t1	AT4G18430	40.517	116	67	2	3	118	66	179	8.78e-21	84.7
MS.gene21410.t1	AT5G60860	35.294	153	84	4	5	146	68	216	1.29e-20	84.3
MS.gene21410.t1	AT5G59150	35.965	114	71	2	5	118	16	127	2.64e-20	82.0
MS.gene21410.t1	AT3G54840	40.777	103	59	2	5	107	89	189	2.83e-20	82.8
MS.gene21410.t1	AT5G65270	36.607	112	69	2	5	116	72	181	3.26e-20	83.2
MS.gene21410.t1	AT5G59150	35.965	114	71	2	5	118	67	178	8.03e-20	82.0
MS.gene21410.t1	AT2G33870	41.228	114	65	2	5	118	68	179	8.09e-20	82.0
MS.gene21410.t1	AT3G46830	35.965	114	71	2	5	118	67	178	1.05e-19	81.6
MS.gene21410.t1	AT3G46830	35.965	114	71	2	5	118	67	178	1.05e-19	81.6
MS.gene21410.t1	AT1G07410	30.872	149	94	3	5	146	67	213	1.75e-19	81.3
MS.gene21410.t1	AT3G12160	32.051	156	85	4	5	145	70	219	1.75e-19	81.3
MS.gene21410.t1	AT2G22290	34.667	150	87	4	3	146	62	206	4.91e-19	79.7
MS.gene21410.t1	AT5G10260	34.014	147	91	4	3	145	62	206	1.05e-18	79.0
MS.gene21410.t1	AT5G47960	35.965	114	71	2	5	118	70	181	1.17e-18	79.0
MS.gene21410.t1	AT1G06400	37.069	116	71	2	5	120	68	181	2.02e-18	78.6
MS.gene21410.t1	AT2G44610	34.459	148	90	3	3	145	62	207	2.04e-18	78.2
MS.gene21410.t1	AT1G09630	35.965	114	71	2	5	118	67	178	3.26e-18	77.8
MS.gene21410.t1	AT5G45130	34.426	122	77	3	5	125	65	184	1.32e-17	75.9
MS.gene21410.t1	AT5G45130	34.426	122	77	3	5	125	73	192	2.06e-17	75.5
MS.gene21410.t1	AT4G39890	36.207	116	73	1	3	118	62	176	2.82e-17	75.5
MS.gene21410.t1	AT4G19640	33.333	126	81	3	5	129	65	188	3.01e-17	75.1
MS.gene21410.t1	AT1G01200	38.835	103	60	3	5	106	83	183	6.95e-17	74.7
MS.gene21410.t1	AT5G46025	41.053	95	53	3	20	113	14	106	2.80e-16	70.5
MS.gene21410.t1	AT5G64990	40.741	108	54	3	3	106	67	168	3.94e-16	72.4
MS.gene21410.t1	AT5G64990	40.741	108	54	3	3	106	60	161	7.38e-16	71.2
MS.gene21410.t1	AT3G18820	33.813	139	82	5	5	134	63	200	9.30e-13	63.2

Find 28 sgRNAs with CRISPR-Local

Find 94 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTTAAAGATCTCTCATTAA+AGG	0.198626	1.4:-71897859	MS.gene21410:intron
CAAAATTCTTGTTGGCAATA+AGG	0.238391	1.4:-71898180	MS.gene21410:CDS
GTGCCAAGTTTGCGCGAAAA+AGG	0.252534	1.4:-71897204	MS.gene21410:CDS
AAGAACAGCAACCGCCTCTT+TGG	0.326685	1.4:+71897133	None:intergenic
TTTGATGCAATCTTGATTAG+TGG	0.340799	1.4:+71898199	None:intergenic
AGAGATCTTTAAAGCATTGC+TGG	0.346216	1.4:+71897868	None:intergenic
AATTGATTTACAGATATTAG+AGG	0.361028	1.4:-71897226	MS.gene21410:intron
GATTGCATCAAAATTCTTGT+TGG	0.374427	1.4:-71898188	MS.gene21410:CDS
GGCGCACATGGAATCGTTCT+TGG	0.394093	1.4:-71898594	MS.gene21410:intron
TGTTGGCAATAAGGTGGATA+AGG	0.416713	1.4:-71898171	MS.gene21410:intron
GCAGCTGGACAAGAGAGGTT+TGG	0.417511	1.4:-71898642	MS.gene21410:intron
AGAACAGCAACCGCCTCTTT+GGG	0.440538	1.4:+71897134	None:intergenic
TTACAAACCTGGTGGGAACA+TGG	0.492228	1.4:-71898244	MS.gene21410:CDS
GGAACATGGGCAAAAGAGGT+TGG	0.518611	1.4:-71898230	MS.gene21410:CDS
GGTGGGAACATGGGCAAAAG+AGG	0.525668	1.4:-71898234	MS.gene21410:CDS
AGAGGGTATGGCTCTTGCAC+AGG	0.538120	1.4:-71897940	MS.gene21410:CDS
TGTAAGCAAAGAAGAGGGTA+TGG	0.544429	1.4:-71897952	MS.gene21410:CDS
TACAAACCTGGTGGGAACAT+GGG	0.559570	1.4:-71898243	MS.gene21410:CDS
AATTCTTGTTGGCAATAAGG+TGG	0.571818	1.4:-71898177	MS.gene21410:CDS
TCTTATTACAGAGGCGCACA+TGG	0.580596	1.4:-71898606	MS.gene21410:CDS
GCGAGAGACATTTACAAACC+TGG	0.589818	1.4:-71898255	MS.gene21410:CDS
AAGAGCTGTAAGCAAAGAAG+AGG	0.595756	1.4:-71897958	MS.gene21410:CDS
AGAGCTGTAAGCAAAGAAGA+GGG	0.635800	1.4:-71897957	MS.gene21410:CDS
TACGAGACATCCCAAAGAGG+CGG	0.640161	1.4:-71897144	MS.gene21410:CDS
ATTTAGTGTATGATGTAACA+AGG	0.660740	1.4:-71898277	MS.gene21410:intron
GTGATATGCTCTTATTACAG+AGG	0.674573	1.4:-71898615	MS.gene21410:CDS
GAGACATTTACAAACCTGGT+GGG	0.674869	1.4:-71898251	MS.gene21410:CDS
AGAGACATTTACAAACCTGG+TGG	0.692793	1.4:-71898252	MS.gene21410:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTATAATATTTAATTTTTTT+TGG	-	chr1.4:71897195-71897214	MS.gene21410:CDS	0.0%
!!	TATCTGTAAATCAATTTATA+TGG	+	chr1.4:71898629-71898648	None:intergenic	15.0%
!!	TAAAAAACTTGGACAAATAA+AGG	-	chr1.4:71898505-71898524	MS.gene21410:intron	20.0%
!!!	AAACTACTTGATAACTTATT+TGG	-	chr1.4:71897798-71897817	MS.gene21410:intron	20.0%
!!!	AATTGATTTACAGATATTAG+AGG	-	chr1.4:71898633-71898652	MS.gene21410:CDS	20.0%
!!!	GTTAAAATTTTAGTGGAAAA+AGG	+	chr1.4:71898575-71898594	None:intergenic	20.0%
!	AAATATTATGGTCTATGGTA+TGG	-	chr1.4:71897712-71897731	MS.gene21410:intron	25.0%
!	AAGGTAAATATTATGGTCTA+TGG	-	chr1.4:71897707-71897726	MS.gene21410:intron	25.0%
!	AGAACATGCATATATGAATT+TGG	+	chr1.4:71898241-71898260	None:intergenic	25.0%
!	ATAAGCTGATCTAAAAAACT+TGG	-	chr1.4:71898494-71898513	MS.gene21410:intron	25.0%
!	ATAAGTTATCAAGTAGTTTG+AGG	+	chr1.4:71897797-71897816	None:intergenic	25.0%
!	ATTTAGTGTATGATGTAACA+AGG	-	chr1.4:71897582-71897601	MS.gene21410:intron	25.0%
!	ATTTGTAGCAAAATTATCCA+GGG	+	chr1.4:71897490-71897509	None:intergenic	25.0%
!	GTATTGTATTCAAATGTGAA+TGG	-	chr1.4:71898066-71898085	MS.gene21410:intron	25.0%
!	TAAGTTATCAAGTAGTTTGA+GGG	+	chr1.4:71897796-71897815	None:intergenic	25.0%
!	TAGCATGAATGTTTCAAAAA+CGG	-	chr1.4:71898365-71898384	MS.gene21410:intron	25.0%
!	TATTATAATCTAACTGCAAC+AGG	+	chr1.4:71897183-71897202	None:intergenic	25.0%
!	TATTTGTAGCAAAATTATCC+AGG	+	chr1.4:71897491-71897510	None:intergenic	25.0%
!!	CTTTAAAGATCTCTCATTAA+AGG	-	chr1.4:71898000-71898019	MS.gene21410:intron	25.0%
!!	GAAAGCTGTTAAAATTTTAG+TGG	+	chr1.4:71898582-71898601	None:intergenic	25.0%
!!!	ATTTAATTTTTTTTGGCAGC+TGG	-	chr1.4:71897202-71897221	MS.gene21410:CDS	25.0%
!!!	CCTTGGTTTTATTATATGAT+CGG	-	chr1.4:71898448-71898467	MS.gene21410:intron	25.0%
!!!	CTTGGTTTTATTATATGATC+GGG	-	chr1.4:71898449-71898468	MS.gene21410:intron	25.0%
!!!	TGTATTGTTTTTCACTTTTC+AGG	-	chr1.4:71897871-71897890	MS.gene21410:CDS	25.0%
!!!	TTTTTTAGATCAGCTTATTG+TGG	+	chr1.4:71898492-71898511	None:intergenic	25.0%
	AAAACAGAACTATGCGAAAT+TGG	+	chr1.4:71898198-71898217	None:intergenic	30.0%
	AACATGAAATCTTGTAGTGT+TGG	-	chr1.4:71897157-71897176	MS.gene21410:CDS	30.0%
	AAGTTATCAAGTAGTTTGAG+GGG	+	chr1.4:71897795-71897814	None:intergenic	30.0%
	AATAAAACCAAGGCATAAGA+GGG	+	chr1.4:71898441-71898460	None:intergenic	30.0%
	ATGCTCAGATGGTTAAAAAA+TGG	-	chr1.4:71898301-71898320	MS.gene21410:intron	30.0%
	CAAAATTCTTGTTGGCAATA+AGG	-	chr1.4:71897679-71897698	MS.gene21410:intron	30.0%
	CAACATTTGATACATAAGAG+AGG	-	chr1.4:71898116-71898135	MS.gene21410:intron	30.0%
	CCGATCATATAATAAAACCA+AGG	+	chr1.4:71898451-71898470	None:intergenic	30.0%
	GATGGTTAAAAAATGGAACT+CGG	-	chr1.4:71898308-71898327	MS.gene21410:intron	30.0%
	GATTGCATCAAAATTCTTGT+TGG	-	chr1.4:71897671-71897690	MS.gene21410:intron	30.0%
	GGTGGATAAGGTAAATATTA+TGG	-	chr1.4:71897700-71897719	MS.gene21410:intron	30.0%
	TAATAAAACCAAGGCATAAG+AGG	+	chr1.4:71898442-71898461	None:intergenic	30.0%
	TTAAAAAATGGAACTCGGTA+TGG	-	chr1.4:71898313-71898332	MS.gene21410:intron	30.0%
	TTTGATGCAATCTTGATTAG+TGG	+	chr1.4:71897663-71897682	None:intergenic	30.0%
	TTTGTAGCAAAATTATCCAG+GGG	+	chr1.4:71897489-71897508	None:intergenic	30.0%
!	TATGAATTTGGAATCAAGAG+TGG	+	chr1.4:71898229-71898248	None:intergenic	30.0%
!	TTTTAGTGGAAAAAGGTGAT+TGG	+	chr1.4:71898568-71898587	None:intergenic	30.0%
!!	TCTTTTGTTATAGCAATGCT+TGG	-	chr1.4:71897451-71897470	MS.gene21410:intron	30.0%
	AATTCTTGTTGGCAATAAGG+TGG	-	chr1.4:71897682-71897701	MS.gene21410:intron	35.0%
	AGGTGATTGGATCATACATT+AGG	+	chr1.4:71898555-71898574	None:intergenic	35.0%
	CTTGCATTCATTACTTACTC+AGG	-	chr1.4:71897736-71897755	MS.gene21410:intron	35.0%
	GGGAGAAAACATAATCTGTA+TGG	+	chr1.4:71897775-71897794	None:intergenic	35.0%
	GGTGATTGGATCATACATTA+GGG	+	chr1.4:71898554-71898573	None:intergenic	35.0%
	GTGATATGCTCTTATTACAG+AGG	-	chr1.4:71897244-71897263	MS.gene21410:intron	35.0%
!	TATGCGAAATTGGTGATCAA+AGG	+	chr1.4:71898188-71898207	None:intergenic	35.0%
!!	AGAGATCTTTAAAGCATTGC+TGG	+	chr1.4:71897994-71898013	None:intergenic	35.0%
	AAGAGCTGTAAGCAAAGAAG+AGG	-	chr1.4:71897901-71897920	MS.gene21410:CDS	40.0%
	AGAGACATTTACAAACCTGG+TGG	-	chr1.4:71897607-71897626	MS.gene21410:intron	40.0%
	AGAGCTGTAAGCAAAGAAGA+GGG	-	chr1.4:71897902-71897921	MS.gene21410:CDS	40.0%
	ATTTCAAGGGCTTGAATGTG+GGG	+	chr1.4:71897416-71897435	None:intergenic	40.0%
	CCACAATGAAAATGCTCAGA+TGG	-	chr1.4:71898290-71898309	MS.gene21410:intron	40.0%
	GAGACATTTACAAACCTGGT+GGG	-	chr1.4:71897608-71897627	MS.gene21410:intron	40.0%
	GATTTCAAGGGCTTGAATGT+GGG	+	chr1.4:71897417-71897436	None:intergenic	40.0%
	TGATTTCAAGGGCTTGAATG+TGG	+	chr1.4:71897418-71897437	None:intergenic	40.0%
	TGTAAGCAAAGAAGAGGGTA+TGG	-	chr1.4:71897907-71897926	MS.gene21410:CDS	40.0%
	TGTTGGCAATAAGGTGGATA+AGG	-	chr1.4:71897688-71897707	MS.gene21410:intron	40.0%
	TTCATTACCCTCTTATGCCT+TGG	-	chr1.4:71898431-71898450	MS.gene21410:intron	40.0%
	TTGGATGTACTAATATCCCC+TGG	-	chr1.4:71897470-71897489	MS.gene21410:intron	40.0%
!	ATTTGGAATCAAGAGTGGTG+TGG	+	chr1.4:71898224-71898243	None:intergenic	40.0%
!	CCATCTGAGCATTTTCATTG+TGG	+	chr1.4:71898293-71898312	None:intergenic	40.0%
!	TGGTTTTTGCACTACACTCT+AGG	+	chr1.4:71897961-71897980	None:intergenic	40.0%
!	TTTTACGAGACATCCCAAAG+AGG	-	chr1.4:71898712-71898731	MS.gene21410:intron	40.0%
!!	GAAGAACAGCAGATTTTAGC+TGG	+	chr1.4:71898607-71898626	None:intergenic	40.0%
	AAGTTTGCGCGAAAAAGGGT+CGG	-	chr1.4:71898660-71898679	MS.gene21410:intron	45.0%
	CATCTGTAGTAGTCGAGTGT+TGG	-	chr1.4:71898044-71898063	MS.gene21410:intron	45.0%
	CTGTGCGTGCTTGATTTCAA+GGG	+	chr1.4:71897429-71897448	None:intergenic	45.0%
	GCGAGAGACATTTACAAACC+TGG	-	chr1.4:71897604-71897623	MS.gene21410:intron	45.0%
	TACAAACCTGGTGGGAACAT+GGG	-	chr1.4:71897616-71897635	MS.gene21410:intron	45.0%
	TGCCAAGTTTGCGCGAAAAA+GGG	-	chr1.4:71898656-71898675	MS.gene21410:intron	45.0%
	TGGGGGAAGAATAGCAATAG+CGG	+	chr1.4:71897398-71897417	None:intergenic	45.0%
	TTACAAACCTGGTGGGAACA+TGG	-	chr1.4:71897615-71897634	MS.gene21410:intron	45.0%
	TTTCAAGGGCTTGAATGTGG+GGG	+	chr1.4:71897415-71897434	None:intergenic	45.0%
!	GCATTGCTGGACATTTTCTC+TGG	+	chr1.4:71897981-71898000	None:intergenic	45.0%
!	TCTTATTACAGAGGCGCACA+TGG	-	chr1.4:71897253-71897272	MS.gene21410:intron	45.0%
!!	GGTGATCAAAGGTGTCACTT+AGG	+	chr1.4:71898177-71898196	None:intergenic	45.0%
	AAGAACAGCAACCGCCTCTT+TGG	+	chr1.4:71898729-71898748	None:intergenic	50.0%
	AGAACAGCAACCGCCTCTTT+GGG	+	chr1.4:71898728-71898747	None:intergenic	50.0%
	CCTGTGCGTGCTTGATTTCA+AGG	+	chr1.4:71897430-71897449	None:intergenic	50.0%
	CCTTGAAATCAAGCACGCAC+AGG	-	chr1.4:71897427-71897446	MS.gene21410:intron	50.0%
	GGAACATGGGCAAAAGAGGT+TGG	-	chr1.4:71897629-71897648	MS.gene21410:intron	50.0%
	GTGCCAAGTTTGCGCGAAAA+AGG	-	chr1.4:71898655-71898674	MS.gene21410:intron	50.0%
	TACGAGACATCCCAAAGAGG+CGG	-	chr1.4:71898715-71898734	MS.gene21410:intron	50.0%
!	TTTTGGCAGCTGGACAAGAG+AGG	-	chr1.4:71897212-71897231	MS.gene21410:CDS	50.0%
!!	GACCCTTTTTCGCGCAAACT+TGG	+	chr1.4:71898661-71898680	None:intergenic	50.0%
	GCAGCTGGACAAGAGAGGTT+TGG	-	chr1.4:71897217-71897236	MS.gene21410:intron	55.0%
	GGCGCACATGGAATCGTTCT+TGG	-	chr1.4:71897265-71897284	MS.gene21410:intron	55.0%
	GGTGGGAACATGGGCAAAAG+AGG	-	chr1.4:71897625-71897644	MS.gene21410:intron	55.0%
!	AGAGGGTATGGCTCTTGCAC+AGG	-	chr1.4:71897919-71897938	MS.gene21410:CDS	55.0%
!	CTTTTGCCCATGTTCCCACC+AGG	+	chr1.4:71897625-71897644	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.4	gene	71897131	71898750	71897131	ID=MS.gene21410
chr1.4	mRNA	71897131	71898750	71897131	ID=MS.gene21410.t1;Parent=MS.gene21410
chr1.4	exon	71898732	71898750	71898732	ID=MS.gene21410.t1.exon1;Parent=MS.gene21410.t1
chr1.4	CDS	71898732	71898750	71898732	ID=cds.MS.gene21410.t1;Parent=MS.gene21410.t1
chr1.4	exon	71898595	71898660	71898595	ID=MS.gene21410.t1.exon2;Parent=MS.gene21410.t1
chr1.4	CDS	71898595	71898660	71898595	ID=cds.MS.gene21410.t1;Parent=MS.gene21410.t1
chr1.4	exon	71898172	71898293	71898172	ID=MS.gene21410.t1.exon3;Parent=MS.gene21410.t1
chr1.4	CDS	71898172	71898293	71898172	ID=cds.MS.gene21410.t1;Parent=MS.gene21410.t1
chr1.4	exon	71897860	71897988	71897860	ID=MS.gene21410.t1.exon4;Parent=MS.gene21410.t1
chr1.4	CDS	71897860	71897988	71897860	ID=cds.MS.gene21410.t1;Parent=MS.gene21410.t1
chr1.4	exon	71897131	71897235	71897131	ID=MS.gene21410.t1.exon5;Parent=MS.gene21410.t1
chr1.4	CDS	71897131	71897235	71897131	ID=cds.MS.gene21410.t1;Parent=MS.gene21410.t1

Gene Sequence

>MS.gene21410

ATGATTTTGTCAAACAACAGTCTGTTAACATGAAATCTTGTAGTGTTGGCCTGTTGCAGTTAGATTATAATATTTAATTTTTTTTGGCAGCTGGACAAGAGAGGTTTGGAACAGTGATATGCTCTTATTACAGAGGCGCACATGGAATCGTTCTTGGTATGCTATTTATATTATAAAATGTAATTTATTTTTTATATATACATTTAGATTTATGATATGTAAATATTAGTAGTTAGTTTCATAATTGTGAAAATTATGTTTTGTCCGCTATTGCTATTCTTCCCCCACATTCAAGCCCTTGAAATCAAGCACGCACAGGTTCTTTTGTTATAGCAATGCTTGGATGTACTAATATCCCCTGGATAATTTTGCTACAAATATTACTGATACAATTTCTCAGTATTGCTTTAGTGCTGACATCTAATATTTTTTTTTTCTTTTCAATTTTCTAATTTAGTGTATGATGTAACAAGGCGAGAGACATTTACAAACCTGGTGGGAACATGGGCAAAAGAGGTTGGACTTTACTCCACTAATCAAGATTGCATCAAAATTCTTGTTGGCAATAAGGTGGATAAGGTAAATATTATGGTCTATGGTATGGTCTTGCATTCATTACTTACTCAGGAAAAGACAGAAAACCATACAGATTATGTTTTCTCCCCTCAAACTACTTGATAACTTATTTGGAATTAGAATAGATCTTCAATGTATCATTATTATCATTGAAGAGTTTCTGTTGTATTGTTTTTCACTTTTCAGGAGAGTGAAAGAGCTGTAAGCAAAGAAGAGGGTATGGCTCTTGCACAGGAACATAGATGCTTGTTCCTAGAGTGTAGTGCAAAAACCAGAGAAAATGTCCAGCAATGCTTTAAAGATCTCTCATTAAAGGTATTAATTTATGATTTTTGTACATCTGTAGTAGTCGAGTGTTGGTATTGTATTCAAATGTGAATGGTAGTTGTACATCGACTATGAATGTATTCAACATTTGATACATAAGAGAGGCGATTCAAGAAACTGAGTTTGCATGTAAATTTCTTCCTAAGTGACACCTTTGATCACCAATTTCGCATAGTTCTGTTTTGCACCACACCACTCTTGATTCCAAATTCATATATGCATGTTCTCTGTTTCATCTATGCTTCATCTTTCTTGTCCACAATGAAAATGCTCAGATGGTTAAAAAATGGAACTCGGTATGGAGTAAAATGTTAATTTCTCAGTCTTCTTATAGCATGAATGTTTCAAAAACGGATGCTTCAGCAAAGAAGTTAGAGTTCTCTGCATGAAGCATATTTTCATTACCCTCTTATGCCTTGGTTTTATTATATGATCGGGATTAAATATTTGTAGTTCCACAATAAGCTGATCTAAAAAACTTGGACAAATAAAGGAAATAATGTGCTATTTTTAATGACCCTAATGTATGATCCAATCACCTTTTTCCACTAAAATTTTAACAGCTTTCAACCAGCTAAAATCTGCTGTTCTTCCATATAAATTGATTTACAGATATTAGAGGTGCCAAGTTTGCGCGAAAAAGGGTCGGTAGAAGTGAAGAGACAAAAGCAAAAGCGCTTTTACGAGACATCCCAAAGAGGCGGTTGCTGTTCTTAG

Protein sequence

>MS.gene21410.t1

MILSNNTGQERFGTVICSYYRGAHGIVLVYDVTRRETFTNLVGTWAKEVGLYSTNQDCIKILVGNKVDKESERAVSKEEGMALAQEHRCLFLECSAKTRENVQQCFKDLSLKILEVPSLREKGSVEVKRQKQKRFYETSQRGGCCS