Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22466.t1 | RHN48429.1 | 93.2 | 754 | 47 | 2 | 1 | 754 | 1 | 750 | 0.00E+00 | 1202.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22466.t1 | A0A396H574 | 93.2 | 754 | 47 | 2 | 1 | 754 | 1 | 750 | 0.0e+00 | 1202.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene22466 | 0.817099 | 3.93E-52 | -1.69E-46 |
| MS.gene050297 | MS.gene22466 | 0.808016 | 3.81E-50 | -1.69E-46 |
| MS.gene051896 | MS.gene22466 | 0.813724 | 2.21E-51 | -1.69E-46 |
| MS.gene051914 | MS.gene22466 | 0.831738 | 1.41E-55 | -1.69E-46 |
| MS.gene051955 | MS.gene22466 | 0.845713 | 3.42E-59 | -1.69E-46 |
| MS.gene052308 | MS.gene22466 | 0.870169 | 1.79E-66 | -1.69E-46 |
| MS.gene052367 | MS.gene22466 | 0.847147 | 1.39E-59 | -1.69E-46 |
| MS.gene053173 | MS.gene22466 | 0.824469 | 7.94E-54 | -1.69E-46 |
| MS.gene053348 | MS.gene22466 | 0.83921 | 1.82E-57 | -1.69E-46 |
| MS.gene053416 | MS.gene22466 | 0.822464 | 2.34E-53 | -1.69E-46 |
| MS.gene053417 | MS.gene22466 | 0.818448 | 1.95E-52 | -1.69E-46 |
| MS.gene054551 | MS.gene22466 | 0.822619 | 2.15E-53 | -1.69E-46 |
| MS.gene054552 | MS.gene22466 | 0.807785 | 4.27E-50 | -1.69E-46 |
| MS.gene054593 | MS.gene22466 | 0.83414 | 3.56E-56 | -1.69E-46 |
| MS.gene054633 | MS.gene22466 | 0.826422 | 2.74E-54 | -1.69E-46 |
| MS.gene055308 | MS.gene22466 | 0.847732 | 9.60E-60 | -1.69E-46 |
| MS.gene055578 | MS.gene22466 | 0.892837 | 1.10E-74 | -1.69E-46 |
| MS.gene055579 | MS.gene22466 | 0.812459 | 4.20E-51 | -1.69E-46 |
| MS.gene055957 | MS.gene22466 | 0.822305 | 2.54E-53 | -1.69E-46 |
| MS.gene056041 | MS.gene22466 | 0.886645 | 2.86E-72 | -1.69E-46 |
| MS.gene05640 | MS.gene22466 | 0.855698 | 5.30E-62 | -1.69E-46 |
| MS.gene056526 | MS.gene22466 | 0.822623 | 2.15E-53 | -1.69E-46 |
| MS.gene056528 | MS.gene22466 | 0.818169 | 2.26E-52 | -1.69E-46 |
| MS.gene05652 | MS.gene22466 | 0.812617 | 3.87E-51 | -1.69E-46 |
| MS.gene057358 | MS.gene22466 | 0.810422 | 1.16E-50 | -1.69E-46 |
| MS.gene057359 | MS.gene22466 | 0.807941 | 3.95E-50 | -1.69E-46 |
| MS.gene057458 | MS.gene22466 | 0.826769 | 2.26E-54 | -1.69E-46 |
| MS.gene058013 | MS.gene22466 | 0.821715 | 3.48E-53 | -1.69E-46 |
| MS.gene058128 | MS.gene22466 | 0.837206 | 5.96E-57 | -1.69E-46 |
| MS.gene058853 | MS.gene22466 | 0.850342 | 1.81E-60 | -1.69E-46 |
| MS.gene059553 | MS.gene22466 | 0.819111 | 1.38E-52 | -1.69E-46 |
| MS.gene059616 | MS.gene22466 | 0.821102 | 4.83E-53 | -1.69E-46 |
| MS.gene060473 | MS.gene22466 | 0.854756 | 9.95E-62 | -1.69E-46 |
| MS.gene060565 | MS.gene22466 | 0.845476 | 3.97E-59 | -1.69E-46 |
| MS.gene06093 | MS.gene22466 | 0.838343 | 3.04E-57 | -1.69E-46 |
| MS.gene061099 | MS.gene22466 | 0.853405 | 2.44E-61 | -1.69E-46 |
| MS.gene061260 | MS.gene22466 | 0.881355 | 2.57E-70 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22466.t1 | MTR_7g100700 | 96.286 | 754 | 23 | 3 | 1 | 754 | 1 | 749 | 0.0 | 1446 |
| MS.gene22466.t1 | MTR_1g066870 | 47.032 | 657 | 294 | 19 | 17 | 649 | 17 | 643 | 9.61e-105 | 335 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22466.t1 | AT3G53320 | 34.653 | 303 | 154 | 12 | 19 | 297 | 16 | 298 | 7.22e-24 | 107 |
| MS.gene22466.t1 | AT2G37070 | 40.602 | 133 | 64 | 5 | 19 | 144 | 18 | 142 | 7.75e-16 | 81.6 |
| MS.gene22466.t1 | AT2G37070 | 40.602 | 133 | 64 | 5 | 19 | 144 | 18 | 142 | 1.10e-15 | 81.3 |
Find 152 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTAGCTGCATTAGCAATTT+TGG | 0.133518 | 7.1:-8259263 | None:intergenic |
| TTTCTTCTTGCGGAATTAAA+TGG | 0.190171 | 7.1:-8260676 | None:intergenic |
| GAATTTGCACTAGGCTTTAT+TGG | 0.199904 | 7.1:-8260307 | None:intergenic |
| GTCGTCTAGCTCTGGGATTC+AGG | 0.216008 | 7.1:+8259291 | MS.gene22466:CDS |
| TCCAATTACCACCAAAATTC+AGG | 0.233828 | 7.1:+8258685 | MS.gene22466:CDS |
| TGACTGGCCAGGAGTTAATT+TGG | 0.237626 | 7.1:-8260581 | None:intergenic |
| GTGTTAATGTTTAGGGGTTT+TGG | 0.243930 | 7.1:+8259042 | MS.gene22466:intron |
| AACACTAAGCGATGCTCTTT+TGG | 0.247393 | 7.1:-8260341 | None:intergenic |
| ACAAACCTTTGCTTAATTCT+TGG | 0.254223 | 7.1:-8261911 | None:intergenic |
| TCAAGAAACAAAACTGAATC+TGG | 0.266121 | 7.1:+8260766 | MS.gene22466:CDS |
| CCAAAGATTGGTTTCTTTGA+TGG | 0.281624 | 7.1:+8261135 | MS.gene22466:CDS |
| GTGTCAAGAGCATCTGTTAT+TGG | 0.287645 | 7.1:+8260520 | MS.gene22466:CDS |
| CTTGCAGCTTTGCTTTGATT+TGG | 0.294963 | 7.1:-8261458 | None:intergenic |
| CCAGCTGTTGCGAGAGTAAT+CGG | 0.318243 | 7.1:+8260033 | MS.gene22466:CDS |
| TAAGTTGCTACCGGAAGATT+TGG | 0.323444 | 7.1:-8260632 | None:intergenic |
| AATGATTCATCAATATGATT+TGG | 0.323598 | 7.1:-8261540 | None:intergenic |
| CCAGCTCCTGCAAAACCTTC+AGG | 0.325778 | 7.1:+8261096 | MS.gene22466:CDS |
| TGAAACTGAAAGTGTTGATT+TGG | 0.331552 | 7.1:+8259186 | MS.gene22466:CDS |
| CCATACCATTGGATTTATCT+TGG | 0.343022 | 7.1:-8261848 | None:intergenic |
| TGTGAATCCATTTCGACCTT+AGG | 0.344717 | 7.1:+8259145 | MS.gene22466:CDS |
| GACAAGGCAAAACACATAAA+TGG | 0.355451 | 7.1:+8260385 | MS.gene22466:CDS |
| AGCGAAGCCCGATGGTGTTC+TGG | 0.355565 | 7.1:-8260743 | None:intergenic |
| GGCTTTATTGGCACCTTTGA+CGG | 0.356299 | 7.1:-8260295 | None:intergenic |
| CCCAGAGCTAGACGACATTC+TGG | 0.369940 | 7.1:-8259284 | None:intergenic |
| CAAAGATTGGTTTCTTTGAT+GGG | 0.372758 | 7.1:+8261136 | MS.gene22466:CDS |
| CACCCCTACCAGCATTGATA+TGG | 0.384562 | 7.1:+8261953 | MS.gene22466:CDS |
| AGCAACTTATCTGATAATAT+TGG | 0.387973 | 7.1:+8260646 | MS.gene22466:CDS |
| ACCAGAATGTCGTCTAGCTC+TGG | 0.390989 | 7.1:+8259283 | MS.gene22466:CDS |
| CGACTGCCTTCGCCAAAGAT+TGG | 0.391284 | 7.1:+8261123 | MS.gene22466:CDS |
| CCATCAAAGAAACCAATCTT+TGG | 0.394047 | 7.1:-8261135 | None:intergenic |
| GGGCAGGAGGCTCAGCAAAA+TGG | 0.394670 | 7.1:+8261024 | MS.gene22466:CDS |
| TATACATCCTCTTCAATCCT+TGG | 0.397018 | 7.1:-8259115 | None:intergenic |
| GCAAGAAGAAACGTTATTGC+TGG | 0.399942 | 7.1:+8260688 | MS.gene22466:CDS |
| ATCAACCAACTTACCTGTGC+TGG | 0.411015 | 7.1:+8262067 | MS.gene22466:CDS |
| TTGGATAATATTGTGGACTT+AGG | 0.412150 | 7.1:-8260562 | None:intergenic |
| TCTTTCGCAGATTGAACTTA+GGG | 0.413908 | 7.1:-8258892 | None:intergenic |
| TGGTGGTAATTGGAAGAAAC+GGG | 0.413945 | 7.1:-8258676 | None:intergenic |
| TACATCACTGTCGCATGAAA+TGG | 0.416230 | 7.1:+8261650 | MS.gene22466:CDS |
| TCTTTGACATCGTTGTTTAT+CGG | 0.416620 | 7.1:-8258601 | None:intergenic |
| TTGGTGGTAATTGGAAGAAA+CGG | 0.418940 | 7.1:-8258677 | None:intergenic |
| CTCTTTCGCAGATTGAACTT+AGG | 0.423818 | 7.1:-8258893 | None:intergenic |
| TCAGCAACTTCCAAATCTTC+CGG | 0.426512 | 7.1:+8260622 | MS.gene22466:CDS |
| ATCGCTCCCTAAGGTCGAAA+TGG | 0.427949 | 7.1:-8259152 | None:intergenic |
| GTATAAATTCTCAGATTTCT+CGG | 0.431931 | 7.1:+8260983 | MS.gene22466:CDS |
| TTTGGAGGGTGATTTGTTTG+AGG | 0.435278 | 7.1:+8259204 | MS.gene22466:CDS |
| CTTGTTGCTGGATTTCTGAA+TGG | 0.440232 | 7.1:-8259239 | None:intergenic |
| CCCTCCCGCCAGAACACCAT+CGG | 0.440512 | 7.1:+8260735 | MS.gene22466:CDS |
| GTGAATCCATTTCGACCTTA+GGG | 0.441776 | 7.1:+8259146 | MS.gene22466:CDS |
| CATCAATATGATTTGGATGT+GGG | 0.447348 | 7.1:-8261533 | None:intergenic |
| TCGTCTAGCTCTGGGATTCA+GGG | 0.447723 | 7.1:+8259292 | MS.gene22466:CDS |
| GAACTATCACACATGTGTTT+AGG | 0.449363 | 7.1:-8260898 | None:intergenic |
| AGCAATAACGTTTCTTCTTG+CGG | 0.458182 | 7.1:-8260686 | None:intergenic |
| AACACATGTGTGATAGTTCA+AGG | 0.461632 | 7.1:+8260902 | MS.gene22466:CDS |
| CATCTGTTATTGGAGGTTCA+AGG | 0.462665 | 7.1:+8260530 | MS.gene22466:CDS |
| TTTGTAATGCTTTCCAGCAC+AGG | 0.466793 | 7.1:-8262080 | None:intergenic |
| ATCAACACTTTCAGTTTCAA+AGG | 0.467451 | 7.1:-8259182 | None:intergenic |
| TGAAGGCATCACCTGCTTCA+AGG | 0.467661 | 7.1:+8260004 | MS.gene22466:CDS |
| TGTGGTATTTGTGTAAAAGT+AGG | 0.484204 | 7.1:-8260078 | None:intergenic |
| CCCGATGGTGTTCTGGCGGG+AGG | 0.485779 | 7.1:-8260736 | None:intergenic |
| CTGGCGGGAGGGCGAGATGA+GGG | 0.488219 | 7.1:-8260724 | None:intergenic |
| TTGTCTTGGTTGATATTGAC+TGG | 0.491915 | 7.1:-8260597 | None:intergenic |
| ATTCGATAACTCCATACCAT+TGG | 0.498382 | 7.1:-8261859 | None:intergenic |
| GCTTTCCAGCACAGGTAAGT+TGG | 0.501226 | 7.1:-8262072 | None:intergenic |
| GAATTATCAGTCAAAGTGTA+AGG | 0.507200 | 7.1:+8261046 | MS.gene22466:CDS |
| ATCTGCGAAAGAGTTTAGCT+TGG | 0.507998 | 7.1:+8258903 | MS.gene22466:CDS |
| ATCTGTTATTGGAGGTTCAA+GGG | 0.509068 | 7.1:+8260531 | MS.gene22466:CDS |
| TCTGCGAAAGAGTTTAGCTT+GGG | 0.510391 | 7.1:+8258904 | MS.gene22466:CDS |
| TTCTTTGTTTCAGATGTCTG+AGG | 0.511993 | 7.1:-8258863 | None:intergenic |
| CCGCTAGTTCTGTTAGTGAC+TGG | 0.512313 | 7.1:+8260845 | MS.gene22466:CDS |
| CAAGAAACAAAACTGAATCT+GGG | 0.519601 | 7.1:+8260767 | MS.gene22466:CDS |
| TCATCAATATGATTTGGATG+TGG | 0.521364 | 7.1:-8261534 | None:intergenic |
| CCTCCCGCCAGAACACCATC+GGG | 0.521771 | 7.1:+8260736 | MS.gene22466:CDS |
| CCGATTACTCTCGCAACAGC+TGG | 0.522284 | 7.1:-8260033 | None:intergenic |
| TTGGTTGATATTGACTGGCC+AGG | 0.525155 | 7.1:-8260592 | None:intergenic |
| AGTTAATTTGGATAATATTG+TGG | 0.526161 | 7.1:-8260569 | None:intergenic |
| CCAAGATAAATCCAATGGTA+TGG | 0.527305 | 7.1:+8261848 | MS.gene22466:CDS |
| ATCTATTTCAAAGCCGTCAA+AGG | 0.527476 | 7.1:+8260282 | MS.gene22466:CDS |
| TAGGGGTGACACATTGATAC+GGG | 0.528043 | 7.1:-8261938 | None:intergenic |
| GCTGGTAGATTCCTTGAAGC+AGG | 0.530424 | 7.1:-8260015 | None:intergenic |
| TCCACATATCATAAGCGAAA+AGG | 0.535480 | 7.1:+8260363 | MS.gene22466:CDS |
| GAACATAAATTCCAAGACTC+AGG | 0.536096 | 7.1:+8261776 | MS.gene22466:CDS |
| TATTGGAGGTTCAAGGGGTA+CGG | 0.538224 | 7.1:+8260537 | MS.gene22466:CDS |
| GCTAGAGTTACTATCAATGC+TGG | 0.539482 | 7.1:-8260926 | None:intergenic |
| CCAGAATGTCGTCTAGCTCT+GGG | 0.542743 | 7.1:+8259284 | MS.gene22466:CDS |
| AAGCCCGATGGTGTTCTGGC+GGG | 0.543148 | 7.1:-8260739 | None:intergenic |
| TATCGGAGAAGCGTCGGAGT+CGG | 0.545556 | 7.1:-8258584 | None:intergenic |
| TGACTCCCTCCTTGTAGCGA+CGG | 0.546341 | 7.1:-8260260 | None:intergenic |
| TCTTTGGCGAAGGCAGTCGC+AGG | 0.546881 | 7.1:-8261119 | None:intergenic |
| AACTGAAAGTGTTGATTTGG+AGG | 0.547878 | 7.1:+8259189 | MS.gene22466:CDS |
| TCTGGCGGGAGGGCGAGATG+AGG | 0.548702 | 7.1:-8260725 | None:intergenic |
| TATAATTGAAGGTGTTGAGA+AGG | 0.549903 | 7.1:+8259084 | MS.gene22466:CDS |
| GTAGGGGTGACACATTGATA+CGG | 0.550011 | 7.1:-8261939 | None:intergenic |
| TGTTAGTGACTGGTCTTCAG+AGG | 0.550980 | 7.1:+8260855 | MS.gene22466:CDS |
| GACTCCCTCCTTGTAGCGAC+GGG | 0.552128 | 7.1:-8260259 | None:intergenic |
| TGCCATATCAATGCTGGTAG+GGG | 0.552572 | 7.1:-8261955 | None:intergenic |
| ATATTATCCAAATTAACTCC+TGG | 0.553361 | 7.1:+8260574 | MS.gene22466:CDS |
| TCAGACACTAATGCAGATCA+AGG | 0.554880 | 7.1:+8260961 | MS.gene22466:CDS |
| ACTGACCCGTGTCGATCACC+AGG | 0.556843 | 7.1:+8261698 | MS.gene22466:CDS |
| TGATAGTAACTCTAGCAGAA+AGG | 0.557439 | 7.1:+8260933 | MS.gene22466:CDS |
| GAGTTAACTAGTATAATTGA+AGG | 0.559085 | 7.1:+8259073 | MS.gene22466:CDS |
| TTGCCATATCAATGCTGGTA+GGG | 0.559511 | 7.1:-8261956 | None:intergenic |
| GGTTAAACTATCGCTCCCTA+AGG | 0.567132 | 7.1:-8259161 | None:intergenic |
| CAGCTGTTGCGAGAGTAATC+GGG | 0.570911 | 7.1:+8260034 | MS.gene22466:CDS |
| ATTATCAGATAAGTTGCTAC+CGG | 0.571364 | 7.1:-8260641 | None:intergenic |
| CACTGTCCTGGTGATCGACA+CGG | 0.577273 | 7.1:-8261704 | None:intergenic |
| TTTCTTGAAGCGAAGCCCGA+TGG | 0.578631 | 7.1:-8260751 | None:intergenic |
| CAGTCACTAACAGAACTAGC+GGG | 0.579052 | 7.1:-8260844 | None:intergenic |
| ACTGTCCTGGTGATCGACAC+GGG | 0.579748 | 7.1:-8261703 | None:intergenic |
| GAAATTGTGGAATTTGCACT+AGG | 0.580738 | 7.1:-8260316 | None:intergenic |
| CCGATGGTGTTCTGGCGGGA+GGG | 0.584412 | 7.1:-8260735 | None:intergenic |
| GGCTTGCTAAAACATGGAGC+AGG | 0.585668 | 7.1:+8261420 | MS.gene22466:CDS |
| AAAGATTGGTTTCTTTGATG+GGG | 0.587295 | 7.1:+8261137 | MS.gene22466:CDS |
| TGGTGATCGACACGGGTCAG+TGG | 0.589738 | 7.1:-8261696 | None:intergenic |
| AAGTGTAAGGACTGCTTCTG+TGG | 0.593654 | 7.1:+8261059 | MS.gene22466:CDS |
| GCGGGAGGGCGAGATGAGGG+AGG | 0.596464 | 7.1:-8260721 | None:intergenic |
| CCACACTCTTCTGTGTCTCA+CGG | 0.596515 | 7.1:+8261399 | MS.gene22466:CDS |
| AAGAAACCAATCTTTGGCGA+AGG | 0.598647 | 7.1:-8261129 | None:intergenic |
| GAAGGCAGTCGCAGGCCTGA+AGG | 0.602125 | 7.1:-8261111 | None:intergenic |
| TCTGTTATTGGAGGTTCAAG+GGG | 0.602408 | 7.1:+8260532 | MS.gene22466:CDS |
| GATTGTTTGATCGAACAAGT+TGG | 0.602661 | 7.1:+8261747 | MS.gene22466:CDS |
| TCAAGAGCATCTGTTATTGG+AGG | 0.609151 | 7.1:+8260523 | MS.gene22466:CDS |
| GTTGTTTATCGGAGAAGCGT+CGG | 0.613172 | 7.1:-8258590 | None:intergenic |
| AACATTACCAAGGATTGAAG+AGG | 0.617361 | 7.1:+8259108 | MS.gene22466:CDS |
| AGCTGCTAGAAAGGTTGGCG+TGG | 0.617848 | 7.1:+8259427 | MS.gene22466:intron |
| TGGCGTGGTTCCTCGCAACA+AGG | 0.620806 | 7.1:+8259442 | MS.gene22466:CDS |
| TGAAGTTGCCATATCAATGC+TGG | 0.621101 | 7.1:-8261961 | None:intergenic |
| GAAGCCCGATGGTGTTCTGG+CGG | 0.624470 | 7.1:-8260740 | None:intergenic |
| AAAGCCCGTCGCTACAAGGA+GGG | 0.625211 | 7.1:+8260255 | MS.gene22466:intron |
| AGCTTCCAAGATAAATCCAA+TGG | 0.625508 | 7.1:+8261843 | MS.gene22466:CDS |
| ATGTAAGTTACCTTGTTGCG+AGG | 0.626684 | 7.1:-8259452 | None:intergenic |
| TCCTCAGTGCGCACTCCACG+TGG | 0.629069 | 7.1:+8261366 | MS.gene22466:CDS |
| TATCATAAGCGAAAAGGACA+AGG | 0.631796 | 7.1:+8260369 | MS.gene22466:CDS |
| CGTCTAGCTCTGGGATTCAG+GGG | 0.637413 | 7.1:+8259293 | MS.gene22466:CDS |
| TCAGTGCGCACTCCACGTGG+TGG | 0.638649 | 7.1:+8261369 | MS.gene22466:CDS |
| CCAGTCACTAACAGAACTAG+CGG | 0.641140 | 7.1:-8260845 | None:intergenic |
| GGAGCAGGAAGTTCAAGTGA+AGG | 0.642645 | 7.1:+8261435 | MS.gene22466:CDS |
| TGTGGTTGCGCTCCACCACG+TGG | 0.647882 | 7.1:-8261381 | None:intergenic |
| TCTCACGGCTTGCTAAAACA+TGG | 0.649356 | 7.1:+8261414 | MS.gene22466:CDS |
| TATCATGATAGACACTGTCC+TGG | 0.654242 | 7.1:-8261716 | None:intergenic |
| TTGATATGGCAACTTCAGCA+AGG | 0.657298 | 7.1:+8261967 | MS.gene22466:CDS |
| GTTGCCATATCAATGCTGGT+AGG | 0.660587 | 7.1:-8261957 | None:intergenic |
| ACTGAAAGTGTTGATTTGGA+GGG | 0.665976 | 7.1:+8259190 | MS.gene22466:CDS |
| AGTCACTAACAGAACTAGCG+GGG | 0.666195 | 7.1:-8260843 | None:intergenic |
| AAGGCAAAACACATAAATGG+TGG | 0.672855 | 7.1:+8260388 | MS.gene22466:CDS |
| AAAAGCCCGTCGCTACAAGG+AGG | 0.677449 | 7.1:+8260254 | MS.gene22466:intron |
| AAGACTCAGGAAAAGATCAA+CGG | 0.677530 | 7.1:+8261789 | MS.gene22466:CDS |
| CCGTGAGACACAGAAGAGTG+TGG | 0.683825 | 7.1:-8261399 | None:intergenic |
| TTGAGAAGGAAACATTACCA+AGG | 0.691255 | 7.1:+8259098 | MS.gene22466:CDS |
| GTCACTAACAGAACTAGCGG+GGG | 0.703043 | 7.1:-8260842 | None:intergenic |
| TATGGAGTTATCGAATCACA+AGG | 0.703342 | 7.1:+8261866 | MS.gene22466:CDS |
| AGGGGTGACACATTGATACG+GGG | 0.749012 | 7.1:-8261937 | None:intergenic |
| ACCACGTGGAGTGCGCACTG+AGG | 0.755457 | 7.1:-8261367 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAGAAATGAAAAATT+AGG | - | chr7.1:8258723-8258742 | None:intergenic | 10.0% |
| !!! | TTTTTCAATTTCTTAAAAAT+AGG | + | chr7.1:8258972-8258991 | MS.gene22466:intron | 10.0% |
| !!! | ATTTTTATCGTTTATCAAAA+TGG | - | chr7.1:8259952-8259971 | None:intergenic | 15.0% |
| !!! | TCTTCAAATTTTTTTGAATT+CGG | - | chr7.1:8258809-8258828 | None:intergenic | 15.0% |
| !! | AATGATTCATCAATATGATT+TGG | - | chr7.1:8261543-8261562 | None:intergenic | 20.0% |
| !! | ATATGTGATTCTATTAACTA+TGG | + | chr7.1:8261296-8261315 | MS.gene22466:intron | 20.0% |
| !! | TAAAGAGATGAAGATTAAAT+TGG | - | chr7.1:8261335-8261354 | None:intergenic | 20.0% |
| !!! | AGTTAATTTGGATAATATTG+TGG | - | chr7.1:8260572-8260591 | None:intergenic | 20.0% |
| !!! | ATCGTAAATGAAATTTTAAG+TGG | + | chr7.1:8260183-8260202 | MS.gene22466:intron | 20.0% |
| !!! | CAACAAAAATACTATAGTTT+TGG | - | chr7.1:8259561-8259580 | None:intergenic | 20.0% |
| !!! | TTTCAATTGATTTTAGATGA+AGG | + | chr7.1:8259987-8260006 | MS.gene22466:intron | 20.0% |
| ! | AAAAACCAAGAATTAAGCAA+AGG | + | chr7.1:8261906-8261925 | MS.gene22466:CDS | 25.0% |
| ! | AAATTTACTACAACTCAGAA+AGG | - | chr7.1:8260475-8260494 | None:intergenic | 25.0% |
| ! | AAGTTTCATTCAGATTCAAT+TGG | - | chr7.1:8258756-8258775 | None:intergenic | 25.0% |
| ! | AATCGTAAGTTAGTATAACT+AGG | - | chr7.1:8260139-8260158 | None:intergenic | 25.0% |
| ! | AATTTGTATCATTATGACCT+TGG | + | chr7.1:8261227-8261246 | MS.gene22466:intron | 25.0% |
| ! | AGCAACTTATCTGATAATAT+TGG | + | chr7.1:8260646-8260665 | MS.gene22466:CDS | 25.0% |
| ! | ATAATGCTTATTCAAAACTG+AGG | + | chr7.1:8259348-8259367 | MS.gene22466:intron | 25.0% |
| ! | ATATTATCCAAATTAACTCC+TGG | + | chr7.1:8260574-8260593 | MS.gene22466:CDS | 25.0% |
| ! | GAGTTAACTAGTATAATTGA+AGG | + | chr7.1:8259073-8259092 | MS.gene22466:CDS | 25.0% |
| ! | GTATAAATTCTCAGATTTCT+CGG | + | chr7.1:8260983-8261002 | MS.gene22466:CDS | 25.0% |
| ! | TAAGTTAGTATAACTAGGAA+AGG | - | chr7.1:8260134-8260153 | None:intergenic | 25.0% |
| ! | TAATGCTTATTCAAAACTGA+GGG | + | chr7.1:8259349-8259368 | MS.gene22466:intron | 25.0% |
| ! | TATCAAAATGGAAAGCAATT+AGG | - | chr7.1:8259940-8259959 | None:intergenic | 25.0% |
| !! | AAAAATGTGAACCTGAATTT+TGG | - | chr7.1:8258699-8258718 | None:intergenic | 25.0% |
| !! | AAAAGATTCATTTTGCAACA+TGG | + | chr7.1:8262004-8262023 | MS.gene22466:CDS | 25.0% |
| !!! | TCTAGTTTTTTGTTTGCAAT+TGG | - | chr7.1:8261501-8261520 | None:intergenic | 25.0% |
| !!! | TCTATTGGTGTTAATGTTTA+GGG | + | chr7.1:8259035-8259054 | MS.gene22466:intron | 25.0% |
| !!! | TTAATCCTCATTTTTGCATA+AGG | + | chr7.1:8260445-8260464 | MS.gene22466:intron | 25.0% |
| !!! | TTCTATTGGTGTTAATGTTT+AGG | + | chr7.1:8259034-8259053 | MS.gene22466:intron | 25.0% |
| !!! | TTGCTTAATTCTTGGTTTTT+AGG | - | chr7.1:8261906-8261925 | None:intergenic | 25.0% |
| ACAAACCTTTGCTTAATTCT+TGG | - | chr7.1:8261914-8261933 | None:intergenic | 30.0% | |
| ATAGAATCACATATTACACG+TGG | - | chr7.1:8261290-8261309 | None:intergenic | 30.0% | |
| ATCAACACTTTCAGTTTCAA+AGG | - | chr7.1:8259185-8259204 | None:intergenic | 30.0% | |
| ATCATGTTGTCGCAATAAAA+AGG | - | chr7.1:8259605-8259624 | None:intergenic | 30.0% | |
| ATTATCAGATAAGTTGCTAC+CGG | - | chr7.1:8260644-8260663 | None:intergenic | 30.0% | |
| CAAGAAACAAAACTGAATCT+GGG | + | chr7.1:8260767-8260786 | MS.gene22466:CDS | 30.0% | |
| GAATTATCAGTCAAAGTGTA+AGG | + | chr7.1:8261046-8261065 | MS.gene22466:CDS | 30.0% | |
| GACTATGTCAAACATAAAGA+AGG | - | chr7.1:8261175-8261194 | None:intergenic | 30.0% | |
| TAATCTTCATCTCTTTATGC+AGG | + | chr7.1:8261338-8261357 | MS.gene22466:intron | 30.0% | |
| TATGTCAAACATAAAGAAGG+CGG | - | chr7.1:8261172-8261191 | None:intergenic | 30.0% | |
| TCAAGAAACAAAACTGAATC+TGG | + | chr7.1:8260766-8260785 | MS.gene22466:CDS | 30.0% | |
| TCTTTGACATCGTTGTTTAT+CGG | - | chr7.1:8258604-8258623 | None:intergenic | 30.0% | |
| TGCTACAAAAATTGAACAGT+GGG | + | chr7.1:8258832-8258851 | MS.gene22466:CDS | 30.0% | |
| TGTGGTATTTGTGTAAAAGT+AGG | - | chr7.1:8260081-8260100 | None:intergenic | 30.0% | |
| TTAAATTAGTTGCATACCTG+TGG | - | chr7.1:8260099-8260118 | None:intergenic | 30.0% | |
| TTGGATAATATTGTGGACTT+AGG | - | chr7.1:8260565-8260584 | None:intergenic | 30.0% | |
| TTTCTTCTTGCGGAATTAAA+TGG | - | chr7.1:8260679-8260698 | None:intergenic | 30.0% | |
| ! | AAATGAATCTTTTGCTGCAA+AGG | - | chr7.1:8261997-8262016 | None:intergenic | 30.0% |
| ! | AATGAATCTTTTGCTGCAAA+GGG | - | chr7.1:8261996-8262015 | None:intergenic | 30.0% |
| ! | AGAAGTGCAATATCAATTCT+AGG | + | chr7.1:8259867-8259886 | MS.gene22466:intron | 30.0% |
| ! | CATCAATATGATTTGGATGT+GGG | - | chr7.1:8261536-8261555 | None:intergenic | 30.0% |
| ! | TACTTTTACACAAATACCAC+AGG | + | chr7.1:8260080-8260099 | MS.gene22466:CDS | 30.0% |
| ! | TCATCAATATGATTTGGATG+TGG | - | chr7.1:8261537-8261556 | None:intergenic | 30.0% |
| !! | AAAGATTGGTTTCTTTGATG+GGG | + | chr7.1:8261137-8261156 | MS.gene22466:CDS | 30.0% |
| !! | CAAAGATTGGTTTCTTTGAT+GGG | + | chr7.1:8261136-8261155 | MS.gene22466:CDS | 30.0% |
| !! | CTATTGGTGTTAATGTTTAG+GGG | + | chr7.1:8259036-8259055 | MS.gene22466:intron | 30.0% |
| !! | TATAATTGAAGGTGTTGAGA+AGG | + | chr7.1:8259084-8259103 | MS.gene22466:CDS | 30.0% |
| !! | TGAAACTGAAAGTGTTGATT+TGG | + | chr7.1:8259186-8259205 | MS.gene22466:CDS | 30.0% |
| !! | TGCAATATCAATTCTAGGAT+AGG | + | chr7.1:8259872-8259891 | MS.gene22466:intron | 30.0% |
| !!! | ATTACATCCCAAGTTTTGAA+AGG | - | chr7.1:8259789-8259808 | None:intergenic | 30.0% |
| !!! | GGAGTGATTTTAACTTAGAA+GGG | + | chr7.1:8261004-8261023 | MS.gene22466:CDS | 30.0% |
| !!! | TTACATCCCAAGTTTTGAAA+GGG | - | chr7.1:8259788-8259807 | None:intergenic | 30.0% |
| AAAAACTCACAGTCTCTAGT+TGG | - | chr7.1:8259322-8259341 | None:intergenic | 35.0% | |
| AACACATGTGTGATAGTTCA+AGG | + | chr7.1:8260902-8260921 | MS.gene22466:CDS | 35.0% | |
| AACATTACCAAGGATTGAAG+AGG | + | chr7.1:8259108-8259127 | MS.gene22466:CDS | 35.0% | |
| AAGACTCAGGAAAAGATCAA+CGG | + | chr7.1:8261789-8261808 | MS.gene22466:CDS | 35.0% | |
| AAGGCAAAACACATAAATGG+TGG | + | chr7.1:8260388-8260407 | MS.gene22466:CDS | 35.0% | |
| AAGTAATCTTGAGAAGAGAC+AGG | - | chr7.1:8259706-8259725 | None:intergenic | 35.0% | |
| AGCAATAACGTTTCTTCTTG+CGG | - | chr7.1:8260689-8260708 | None:intergenic | 35.0% | |
| AGCTTCCAAGATAAATCCAA+TGG | + | chr7.1:8261843-8261862 | MS.gene22466:CDS | 35.0% | |
| AGTAATCTTGAGAAGAGACA+GGG | - | chr7.1:8259705-8259724 | None:intergenic | 35.0% | |
| ATCTATTTCAAAGCCGTCAA+AGG | + | chr7.1:8260282-8260301 | MS.gene22466:CDS | 35.0% | |
| ATCTGTTATTGGAGGTTCAA+GGG | + | chr7.1:8260531-8260550 | MS.gene22466:CDS | 35.0% | |
| ATTCGATAACTCCATACCAT+TGG | - | chr7.1:8261862-8261881 | None:intergenic | 35.0% | |
| CACTTAACAGTAGGATCATA+AGG | - | chr7.1:8259678-8259697 | None:intergenic | 35.0% | |
| CCAAGATAAATCCAATGGTA+TGG | + | chr7.1:8261848-8261867 | MS.gene22466:CDS | 35.0% | |
| CCATACCATTGGATTTATCT+TGG | - | chr7.1:8261851-8261870 | None:intergenic | 35.0% | |
| CCATCAAAGAAACCAATCTT+TGG | - | chr7.1:8261138-8261157 | None:intergenic | 35.0% | |
| CTGCTACAAAAATTGAACAG+TGG | + | chr7.1:8258831-8258850 | MS.gene22466:CDS | 35.0% | |
| GAAATTGTGGAATTTGCACT+AGG | - | chr7.1:8260319-8260338 | None:intergenic | 35.0% | |
| GAACATAAATTCCAAGACTC+AGG | + | chr7.1:8261776-8261795 | MS.gene22466:CDS | 35.0% | |
| GAACTATCACACATGTGTTT+AGG | - | chr7.1:8260901-8260920 | None:intergenic | 35.0% | |
| GACAAGGCAAAACACATAAA+TGG | + | chr7.1:8260385-8260404 | MS.gene22466:CDS | 35.0% | |
| GATTGTTTGATCGAACAAGT+TGG | + | chr7.1:8261747-8261766 | MS.gene22466:CDS | 35.0% | |
| GCATTCCTTATGCAAAAATG+AGG | - | chr7.1:8260453-8260472 | None:intergenic | 35.0% | |
| GTGGACATTGATATACATTC+AGG | - | chr7.1:8259831-8259850 | None:intergenic | 35.0% | |
| TATACATCCTCTTCAATCCT+TGG | - | chr7.1:8259118-8259137 | None:intergenic | 35.0% | |
| TATCATAAGCGAAAAGGACA+AGG | + | chr7.1:8260369-8260388 | MS.gene22466:CDS | 35.0% | |
| TATGGAGTTATCGAATCACA+AGG | + | chr7.1:8261866-8261885 | MS.gene22466:CDS | 35.0% | |
| TATTTCTTACCGAGTGAGAT+TGG | + | chr7.1:8259625-8259644 | MS.gene22466:intron | 35.0% | |
| TCCAATTACCACCAAAATTC+AGG | + | chr7.1:8258685-8258704 | MS.gene22466:CDS | 35.0% | |
| TCCACATATCATAAGCGAAA+AGG | + | chr7.1:8260363-8260382 | MS.gene22466:CDS | 35.0% | |
| TCTATGTAACCAATCTCACT+CGG | - | chr7.1:8259637-8259656 | None:intergenic | 35.0% | |
| TCTTTCGCAGATTGAACTTA+GGG | - | chr7.1:8258895-8258914 | None:intergenic | 35.0% | |
| TGATAGTAACTCTAGCAGAA+AGG | + | chr7.1:8260933-8260952 | MS.gene22466:CDS | 35.0% | |
| TGATATTGCACTTCTGTGAT+GGG | - | chr7.1:8259862-8259881 | None:intergenic | 35.0% | |
| TGTTTCCCCTTTCAAAACTT+GGG | + | chr7.1:8259779-8259798 | MS.gene22466:intron | 35.0% | |
| TTGAGAAGGAAACATTACCA+AGG | + | chr7.1:8259098-8259117 | MS.gene22466:CDS | 35.0% | |
| TTGATATTGCACTTCTGTGA+TGG | - | chr7.1:8259863-8259882 | None:intergenic | 35.0% | |
| ! | AATGTGAACCTGAATTTTGG+TGG | - | chr7.1:8258696-8258715 | None:intergenic | 35.0% |
| ! | CATTTTCAGAAAACGAAGCT+TGG | + | chr7.1:8258777-8258796 | MS.gene22466:intron | 35.0% |
| ! | GAATTTGCACTAGGCTTTAT+TGG | - | chr7.1:8260310-8260329 | None:intergenic | 35.0% |
| ! | GTGTTAATGTTTAGGGGTTT+TGG | + | chr7.1:8259042-8259061 | MS.gene22466:intron | 35.0% |
| ! | TCCTTTTCGCTTATGATATG+TGG | - | chr7.1:8260367-8260386 | None:intergenic | 35.0% |
| ! | TGCTCTTTTGGATGAAATTG+TGG | - | chr7.1:8260332-8260351 | None:intergenic | 35.0% |
| ! | TTCTTTGTTTCAGATGTCTG+AGG | - | chr7.1:8258866-8258885 | None:intergenic | 35.0% |
| ! | TTGGTGGTAATTGGAAGAAA+CGG | - | chr7.1:8258680-8258699 | None:intergenic | 35.0% |
| ! | TTGTCTTGGTTGATATTGAC+TGG | - | chr7.1:8260600-8260619 | None:intergenic | 35.0% |
| !! | AACTGAAAGTGTTGATTTGG+AGG | + | chr7.1:8259189-8259208 | MS.gene22466:CDS | 35.0% |
| !! | ACACAATTTCAGCTTTAGAC+AGG | - | chr7.1:8259909-8259928 | None:intergenic | 35.0% |
| !! | ACCTGAATTTTGGTGGTAAT+TGG | - | chr7.1:8258689-8258708 | None:intergenic | 35.0% |
| !! | ACTGAAAGTGTTGATTTGGA+GGG | + | chr7.1:8259190-8259209 | MS.gene22466:CDS | 35.0% |
| !! | CCAAAGATTGGTTTCTTTGA+TGG | + | chr7.1:8261135-8261154 | MS.gene22466:CDS | 35.0% |
| !!! | ACTGCTTTTTTCACTAATGC+TGG | + | chr7.1:8258929-8258948 | MS.gene22466:CDS | 35.0% |
| !!! | CGGAGTGATTTTAACTTAGA+AGG | + | chr7.1:8261003-8261022 | MS.gene22466:CDS | 35.0% |
| !!! | GATTTTATCTCTGAAGTTGC+TGG | - | chr7.1:8262050-8262069 | None:intergenic | 35.0% |
| !!! | TACATCCCAAGTTTTGAAAG+GGG | - | chr7.1:8259787-8259806 | None:intergenic | 35.0% |
| !!! | TCTTTTTTCAGCTGCTAGAA+AGG | + | chr7.1:8259418-8259437 | MS.gene22466:intron | 35.0% |
| !!! | TGATTTTAACTTAGAAGGGC+AGG | + | chr7.1:8261008-8261027 | MS.gene22466:CDS | 35.0% |
| AAGAAACCAATCTTTGGCGA+AGG | - | chr7.1:8261132-8261151 | None:intergenic | 40.0% | |
| ATCTGCGAAAGAGTTTAGCT+TGG | + | chr7.1:8258903-8258922 | MS.gene22466:CDS | 40.0% | |
| ATGGTGGTTAGTACTTGCAT+TGG | + | chr7.1:8260404-8260423 | MS.gene22466:intron | 40.0% | |
| ATGTAAGTTACCTTGTTGCG+AGG | - | chr7.1:8259455-8259474 | None:intergenic | 40.0% | |
| CAGCTGAAAAAAGAGAGTCA+AGG | - | chr7.1:8259412-8259431 | None:intergenic | 40.0% | |
| CAGGGTTAACACTTAACAGT+AGG | - | chr7.1:8259687-8259706 | None:intergenic | 40.0% | |
| CATCTGTTATTGGAGGTTCA+AGG | + | chr7.1:8260530-8260549 | MS.gene22466:CDS | 40.0% | |
| CATTCAGGTCAAAGTTCCAA+AGG | - | chr7.1:8259816-8259835 | None:intergenic | 40.0% | |
| CTCTTTCGCAGATTGAACTT+AGG | - | chr7.1:8258896-8258915 | None:intergenic | 40.0% | |
| CTGTTTCCCCTTTCAAAACT+TGG | + | chr7.1:8259778-8259797 | MS.gene22466:intron | 40.0% | |
| CTTGCAGCTTTGCTTTGATT+TGG | - | chr7.1:8261461-8261480 | None:intergenic | 40.0% | |
| CTTGTTGCTGGATTTCTGAA+TGG | - | chr7.1:8259242-8259261 | None:intergenic | 40.0% | |
| GAAAAACCAATACGTGGCTA+TGG | - | chr7.1:8261268-8261287 | None:intergenic | 40.0% | |
| GATATTGCACTTCTGTGATG+GGG | - | chr7.1:8259861-8259880 | None:intergenic | 40.0% | |
| GCAAGAAGAAACGTTATTGC+TGG | + | chr7.1:8260688-8260707 | MS.gene22466:CDS | 40.0% | |
| GCTAGAGTTACTATCAATGC+TGG | - | chr7.1:8260929-8260948 | None:intergenic | 40.0% | |
| GTGAATCCATTTCGACCTTA+GGG | + | chr7.1:8259146-8259165 | MS.gene22466:CDS | 40.0% | |
| TAAGTTGCTACCGGAAGATT+TGG | - | chr7.1:8260635-8260654 | None:intergenic | 40.0% | |
| TACATCACTGTCGCATGAAA+TGG | + | chr7.1:8261650-8261669 | MS.gene22466:CDS | 40.0% | |
| TATCATGATAGACACTGTCC+TGG | - | chr7.1:8261719-8261738 | None:intergenic | 40.0% | |
| TCAGACACTAATGCAGATCA+AGG | + | chr7.1:8260961-8260980 | MS.gene22466:CDS | 40.0% | |
| TCAGCAACTTCCAAATCTTC+CGG | + | chr7.1:8260622-8260641 | MS.gene22466:CDS | 40.0% | |
| TCTGTTATTGGAGGTTCAAG+GGG | + | chr7.1:8260532-8260551 | MS.gene22466:CDS | 40.0% | |
| TGAAGTTGCCATATCAATGC+TGG | - | chr7.1:8261964-8261983 | None:intergenic | 40.0% | |
| TGGTGGTAATTGGAAGAAAC+GGG | - | chr7.1:8258679-8258698 | None:intergenic | 40.0% | |
| TGTGAATCCATTTCGACCTT+AGG | + | chr7.1:8259145-8259164 | MS.gene22466:CDS | 40.0% | |
| TTGATATGGCAACTTCAGCA+AGG | + | chr7.1:8261967-8261986 | MS.gene22466:CDS | 40.0% | |
| TTGCCATATCAATGCTGGTA+GGG | - | chr7.1:8261959-8261978 | None:intergenic | 40.0% | |
| TTGGGATGTAATTCCACCTT+TGG | + | chr7.1:8259797-8259816 | MS.gene22466:intron | 40.0% | |
| TTTGTAATGCTTTCCAGCAC+AGG | - | chr7.1:8262083-8262102 | None:intergenic | 40.0% | |
| ! | AACACTAAGCGATGCTCTTT+TGG | - | chr7.1:8260344-8260363 | None:intergenic | 40.0% |
| ! | GGTAGCTGCATTAGCAATTT+TGG | - | chr7.1:8259266-8259285 | None:intergenic | 40.0% |
| ! | GTTGATCTTTTCCTGAGTCT+TGG | - | chr7.1:8261790-8261809 | None:intergenic | 40.0% |
| ! | TCTGCGAAAGAGTTTAGCTT+GGG | + | chr7.1:8258904-8258923 | MS.gene22466:CDS | 40.0% |
| ! | TTTTCAGCTGCTAGAAAGGT+TGG | + | chr7.1:8259422-8259441 | MS.gene22466:intron | 40.0% |
| !! | GTGTCAAGAGCATCTGTTAT+TGG | + | chr7.1:8260520-8260539 | MS.gene22466:CDS | 40.0% |
| !! | TCAAGAGCATCTGTTATTGG+AGG | + | chr7.1:8260523-8260542 | MS.gene22466:CDS | 40.0% |
| !! | TTTGGAGGGTGATTTGTTTG+AGG | + | chr7.1:8259204-8259223 | MS.gene22466:CDS | 40.0% |
| !!! | AGCAATTTTGGACTTGTTGC+TGG | - | chr7.1:8259254-8259273 | None:intergenic | 40.0% |
| !!! | GGAAGTTGCTGATTTTGTCT+TGG | - | chr7.1:8260614-8260633 | None:intergenic | 40.0% |
| !!! | TTTTAACTTAGAAGGGCAGG+AGG | + | chr7.1:8261011-8261030 | MS.gene22466:CDS | 40.0% |
| AAGTGTAAGGACTGCTTCTG+TGG | + | chr7.1:8261059-8261078 | MS.gene22466:CDS | 45.0% | |
| AATACGTGGCTATGGCTTTC+AGG | - | chr7.1:8261260-8261279 | None:intergenic | 45.0% | |
| AGTCACTAACAGAACTAGCG+GGG | - | chr7.1:8260846-8260865 | None:intergenic | 45.0% | |
| ATCAACCAACTTACCTGTGC+TGG | + | chr7.1:8262067-8262086 | MS.gene22466:CDS | 45.0% | |
| CACGTGGAAAAACCAATACG+TGG | - | chr7.1:8261274-8261293 | None:intergenic | 45.0% | |
| CAGTCACTAACAGAACTAGC+GGG | - | chr7.1:8260847-8260866 | None:intergenic | 45.0% | |
| CCAGTCACTAACAGAACTAG+CGG | - | chr7.1:8260848-8260867 | None:intergenic | 45.0% | |
| GGTTAAACTATCGCTCCCTA+AGG | - | chr7.1:8259164-8259183 | None:intergenic | 45.0% | |
| GTAGGGGTGACACATTGATA+CGG | - | chr7.1:8261942-8261961 | None:intergenic | 45.0% | |
| GTTGCCATATCAATGCTGGT+AGG | - | chr7.1:8261960-8261979 | None:intergenic | 45.0% | |
| TAGGGGTGACACATTGATAC+GGG | - | chr7.1:8261941-8261960 | None:intergenic | 45.0% | |
| TATTGGAGGTTCAAGGGGTA+CGG | + | chr7.1:8260537-8260556 | MS.gene22466:CDS | 45.0% | |
| TCAGGTCAAAGTTCCAAAGG+TGG | - | chr7.1:8259813-8259832 | None:intergenic | 45.0% | |
| TGAAAGCCATAGCCACGTAT+TGG | + | chr7.1:8261259-8261278 | MS.gene22466:intron | 45.0% | |
| TGCCATATCAATGCTGGTAG+GGG | - | chr7.1:8261958-8261977 | None:intergenic | 45.0% | |
| ! | GATTTGGATGTGGGTTTTGC+TGG | - | chr7.1:8261527-8261546 | None:intergenic | 45.0% |
| ! | GTTGTTTATCGGAGAAGCGT+CGG | - | chr7.1:8258593-8258612 | None:intergenic | 45.0% |
| ! | TCTGTGATGGGGTTACTTTG+TGG | - | chr7.1:8259850-8259869 | None:intergenic | 45.0% |
| ! | TGACTGGCCAGGAGTTAATT+TGG | - | chr7.1:8260584-8260603 | None:intergenic | 45.0% |
| ! | TTGGTTGATATTGACTGGCC+AGG | - | chr7.1:8260595-8260614 | None:intergenic | 45.0% |
| !! | CAGCTTTAGACAGGACAACA+TGG | - | chr7.1:8259900-8259919 | None:intergenic | 45.0% |
| !! | GGCTTTATTGGCACCTTTGA+CGG | - | chr7.1:8260298-8260317 | None:intergenic | 45.0% |
| !! | TCTCACGGCTTGCTAAAACA+TGG | + | chr7.1:8261414-8261433 | MS.gene22466:CDS | 45.0% |
| !! | TGTTAGTGACTGGTCTTCAG+AGG | + | chr7.1:8260855-8260874 | MS.gene22466:CDS | 45.0% |
| !!! | TTTAGGGGTTTTGGATGCTG+AGG | + | chr7.1:8259051-8259070 | MS.gene22466:intron | 45.0% |
| !!! | GTTTTTTTTTTTTTTTAAAA+AGG | + | chr7.1:8259535-8259554 | MS.gene22466:intron | 5.0% |
| !!! | TTTATTTATTTATTTTCTAT+TGG | + | chr7.1:8259020-8259039 | MS.gene22466:intron | 5.0% |
| AGGGGTGACACATTGATACG+GGG | - | chr7.1:8261940-8261959 | None:intergenic | 50.0% | |
| ATCGCTCCCTAAGGTCGAAA+TGG | - | chr7.1:8259155-8259174 | None:intergenic | 50.0% | |
| CAGCTGTTGCGAGAGTAATC+GGG | + | chr7.1:8260034-8260053 | MS.gene22466:CDS | 50.0% | |
| CCACACTCTTCTGTGTCTCA+CGG | + | chr7.1:8261399-8261418 | MS.gene22466:CDS | 50.0% | |
| CCAGCTGTTGCGAGAGTAAT+CGG | + | chr7.1:8260033-8260052 | MS.gene22466:CDS | 50.0% | |
| GCTGGTAGATTCCTTGAAGC+AGG | - | chr7.1:8260018-8260037 | None:intergenic | 50.0% | |
| GCTTTCCAGCACAGGTAAGT+TGG | - | chr7.1:8262075-8262094 | None:intergenic | 50.0% | |
| GGAGCAGGAAGTTCAAGTGA+AGG | + | chr7.1:8261435-8261454 | MS.gene22466:CDS | 50.0% | |
| GTCACTAACAGAACTAGCGG+GGG | - | chr7.1:8260845-8260864 | None:intergenic | 50.0% | |
| TGAAAAAGCCCGTCGCTACA+AGG | + | chr7.1:8260251-8260270 | MS.gene22466:intron | 50.0% | |
| TTTCTTGAAGCGAAGCCCGA+TGG | - | chr7.1:8260754-8260773 | None:intergenic | 50.0% | |
| ! | ACCAGAATGTCGTCTAGCTC+TGG | + | chr7.1:8259283-8259302 | MS.gene22466:CDS | 50.0% |
| ! | CTGAAGGTTTTGCAGGAGCT+GGG | - | chr7.1:8261098-8261117 | None:intergenic | 50.0% |
| ! | TGAAGGTTTTGCAGGAGCTG+GGG | - | chr7.1:8261097-8261116 | None:intergenic | 50.0% |
| !! | CACCCCTACCAGCATTGATA+TGG | + | chr7.1:8261953-8261972 | MS.gene22466:CDS | 50.0% |
| !! | CCAGAATGTCGTCTAGCTCT+GGG | + | chr7.1:8259284-8259303 | MS.gene22466:CDS | 50.0% |
| !! | CCGCTAGTTCTGTTAGTGAC+TGG | + | chr7.1:8260845-8260864 | MS.gene22466:CDS | 50.0% |
| !! | GGCTTGCTAAAACATGGAGC+AGG | + | chr7.1:8261420-8261439 | MS.gene22466:CDS | 50.0% |
| !! | TCGTCTAGCTCTGGGATTCA+GGG | + | chr7.1:8259292-8259311 | MS.gene22466:CDS | 50.0% |
| !! | TGAAGGCATCACCTGCTTCA+AGG | + | chr7.1:8260004-8260023 | MS.gene22466:CDS | 50.0% |
| AAAAGCCCGTCGCTACAAGG+AGG | + | chr7.1:8260254-8260273 | MS.gene22466:intron | 55.0% | |
| AAAGCCCGTCGCTACAAGGA+GGG | + | chr7.1:8260255-8260274 | MS.gene22466:intron | 55.0% | |
| ACTGTCCTGGTGATCGACAC+GGG | - | chr7.1:8261706-8261725 | None:intergenic | 55.0% | |
| AGCTGCTAGAAAGGTTGGCG+TGG | + | chr7.1:8259427-8259446 | MS.gene22466:intron | 55.0% | |
| CACTGTCCTGGTGATCGACA+CGG | - | chr7.1:8261707-8261726 | None:intergenic | 55.0% | |
| CCAGCTCCTGCAAAACCTTC+AGG | + | chr7.1:8261096-8261115 | MS.gene22466:CDS | 55.0% | |
| CCAGTTGAACCAGCCCATTG+GGG | - | chr7.1:8259752-8259771 | None:intergenic | 55.0% | |
| CCCAGAGCTAGACGACATTC+TGG | - | chr7.1:8259287-8259306 | None:intergenic | 55.0% | |
| CCCAGTTGAACCAGCCCATT+GGG | - | chr7.1:8259753-8259772 | None:intergenic | 55.0% | |
| CCGATTACTCTCGCAACAGC+TGG | - | chr7.1:8260036-8260055 | None:intergenic | 55.0% | |
| CCGTGAGACACAGAAGAGTG+TGG | - | chr7.1:8261402-8261421 | None:intergenic | 55.0% | |
| CGACTGCCTTCGCCAAAGAT+TGG | + | chr7.1:8261123-8261142 | MS.gene22466:CDS | 55.0% | |
| GCTAGATGTGCCACCCCAAT+GGG | + | chr7.1:8259736-8259755 | MS.gene22466:intron | 55.0% | |
| TGACTCCCTCCTTGTAGCGA+CGG | - | chr7.1:8260263-8260282 | None:intergenic | 55.0% | |
| TGCTAGATGTGCCACCCCAA+TGG | + | chr7.1:8259735-8259754 | MS.gene22466:intron | 55.0% | |
| ! | CCTGAAGGTTTTGCAGGAGC+TGG | - | chr7.1:8261099-8261118 | None:intergenic | 55.0% |
| ! | GAAGGTTTTGCAGGAGCTGG+GGG | - | chr7.1:8261096-8261115 | None:intergenic | 55.0% |
| ! | GGCTTTCAGGTGTGTCACCA+AGG | - | chr7.1:8261247-8261266 | None:intergenic | 55.0% |
| !! | CCAATGGGCTGGTTCAACTG+GGG | + | chr7.1:8259751-8259770 | MS.gene22466:intron | 55.0% |
| !! | CCCAATGGGCTGGTTCAACT+GGG | + | chr7.1:8259750-8259769 | MS.gene22466:intron | 55.0% |
| !! | CGTCTAGCTCTGGGATTCAG+GGG | + | chr7.1:8259293-8259312 | MS.gene22466:CDS | 55.0% |
| !! | GTCGTCTAGCTCTGGGATTC+AGG | + | chr7.1:8259291-8259310 | MS.gene22466:CDS | 55.0% |
| !! | TATCGGAGAAGCGTCGGAGT+CGG | - | chr7.1:8258587-8258606 | None:intergenic | 55.0% |
| AAGCCCGATGGTGTTCTGGC+GGG | - | chr7.1:8260742-8260761 | None:intergenic | 60.0% | |
| AGCGAAGCCCGATGGTGTTC+TGG | - | chr7.1:8260746-8260765 | None:intergenic | 60.0% | |
| CCCCAGTTGAACCAGCCCAT+TGG | - | chr7.1:8259754-8259773 | None:intergenic | 60.0% | |
| GAAGCCCGATGGTGTTCTGG+CGG | - | chr7.1:8260743-8260762 | None:intergenic | 60.0% | |
| GACTCCCTCCTTGTAGCGAC+GGG | - | chr7.1:8260262-8260281 | None:intergenic | 60.0% | |
| GGGCAGGAGGCTCAGCAAAA+TGG | + | chr7.1:8261024-8261043 | MS.gene22466:CDS | 60.0% | |
| GTTGAACCAGCCCATTGGGG+TGG | - | chr7.1:8259749-8259768 | None:intergenic | 60.0% | |
| TCTTTGGCGAAGGCAGTCGC+AGG | - | chr7.1:8261122-8261141 | None:intergenic | 60.0% | |
| TGGCGTGGTTCCTCGCAACA+AGG | + | chr7.1:8259442-8259461 | MS.gene22466:CDS | 60.0% | |
| TGGTGATCGACACGGGTCAG+TGG | - | chr7.1:8261699-8261718 | None:intergenic | 60.0% | |
| ! | ACTGACCCGTGTCGATCACC+AGG | + | chr7.1:8261698-8261717 | MS.gene22466:CDS | 60.0% |
| ! | CGCAGGCCTGAAGGTTTTGC+AGG | - | chr7.1:8261105-8261124 | None:intergenic | 60.0% |
| !! | CCCCAATGGGCTGGTTCAAC+TGG | + | chr7.1:8259749-8259768 | MS.gene22466:intron | 60.0% |
| !! | TGGGCTGGTTCAACTGGGGA+TGG | + | chr7.1:8259755-8259774 | MS.gene22466:intron | 60.0% |
| ACCACGTGGAGTGCGCACTG+AGG | - | chr7.1:8261370-8261389 | None:intergenic | 65.0% | |
| CCCTCCCGCCAGAACACCAT+CGG | + | chr7.1:8260735-8260754 | MS.gene22466:CDS | 65.0% | |
| CCGATGGTGTTCTGGCGGGA+GGG | - | chr7.1:8260738-8260757 | None:intergenic | 65.0% | |
| CCTCCCGCCAGAACACCATC+GGG | + | chr7.1:8260736-8260755 | MS.gene22466:CDS | 65.0% | |
| GAAGGCAGTCGCAGGCCTGA+AGG | - | chr7.1:8261114-8261133 | None:intergenic | 65.0% | |
| GATGTGCCACCCCAATGGGC+TGG | + | chr7.1:8259740-8259759 | MS.gene22466:intron | 65.0% | |
| TCAGTGCGCACTCCACGTGG+TGG | + | chr7.1:8261369-8261388 | MS.gene22466:CDS | 65.0% | |
| TCCTCAGTGCGCACTCCACG+TGG | + | chr7.1:8261366-8261385 | MS.gene22466:CDS | 65.0% | |
| TGTGGTTGCGCTCCACCACG+TGG | - | chr7.1:8261384-8261403 | None:intergenic | 65.0% | |
| CCCGATGGTGTTCTGGCGGG+AGG | - | chr7.1:8260739-8260758 | None:intergenic | 70.0% | |
| CTGGCGGGAGGGCGAGATGA+GGG | - | chr7.1:8260727-8260746 | None:intergenic | 70.0% | |
| TCTGGCGGGAGGGCGAGATG+AGG | - | chr7.1:8260728-8260747 | None:intergenic | 70.0% | |
| GCGGGAGGGCGAGATGAGGG+AGG | - | chr7.1:8260724-8260743 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 8258577 | 8262115 | 8258577 | ID=MS.gene22466 |
| chr7.1 | mRNA | 8258577 | 8262115 | 8258577 | ID=MS.gene22466.t1;Parent=MS.gene22466 |
| chr7.1 | exon | 8258577 | 8258706 | 8258577 | ID=MS.gene22466.t1.exon1;Parent=MS.gene22466.t1 |
| chr7.1 | CDS | 8258577 | 8258706 | 8258577 | ID=cds.MS.gene22466.t1;Parent=MS.gene22466.t1 |
| chr7.1 | exon | 8258786 | 8258950 | 8258786 | ID=MS.gene22466.t1.exon2;Parent=MS.gene22466.t1 |
| chr7.1 | CDS | 8258786 | 8258950 | 8258786 | ID=cds.MS.gene22466.t1;Parent=MS.gene22466.t1 |
| chr7.1 | exon | 8259056 | 8259331 | 8259056 | ID=MS.gene22466.t1.exon3;Parent=MS.gene22466.t1 |
| chr7.1 | CDS | 8259056 | 8259331 | 8259056 | ID=cds.MS.gene22466.t1;Parent=MS.gene22466.t1 |
| chr7.1 | exon | 8259429 | 8259463 | 8259429 | ID=MS.gene22466.t1.exon4;Parent=MS.gene22466.t1 |
| chr7.1 | CDS | 8259429 | 8259463 | 8259429 | ID=cds.MS.gene22466.t1;Parent=MS.gene22466.t1 |
| chr7.1 | exon | 8260003 | 8260101 | 8260003 | ID=MS.gene22466.t1.exon5;Parent=MS.gene22466.t1 |
| chr7.1 | CDS | 8260003 | 8260101 | 8260003 | ID=cds.MS.gene22466.t1;Parent=MS.gene22466.t1 |
| chr7.1 | exon | 8260259 | 8260409 | 8260259 | ID=MS.gene22466.t1.exon6;Parent=MS.gene22466.t1 |
| chr7.1 | CDS | 8260259 | 8260409 | 8260259 | ID=cds.MS.gene22466.t1;Parent=MS.gene22466.t1 |
| chr7.1 | exon | 8260506 | 8261158 | 8260506 | ID=MS.gene22466.t1.exon7;Parent=MS.gene22466.t1 |
| chr7.1 | CDS | 8260506 | 8261158 | 8260506 | ID=cds.MS.gene22466.t1;Parent=MS.gene22466.t1 |
| chr7.1 | exon | 8261360 | 8262115 | 8261360 | ID=MS.gene22466.t1.exon8;Parent=MS.gene22466.t1 |
| chr7.1 | CDS | 8261360 | 8262115 | 8261360 | ID=cds.MS.gene22466.t1;Parent=MS.gene22466.t1 |
| Gene Sequence |
| Protein sequence |
