Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28525.t1 | XP_013446432.1 | 97.7 | 44 | 1 | 0 | 1 | 44 | 1 | 44 | 5.40E-14 | 87.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28525.t1 | P0CB17 | 63.6 | 44 | 16 | 0 | 1 | 44 | 1 | 44 | 2.0e-09 | 63.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28525.t1 | G7ZVI6 | 97.7 | 44 | 1 | 0 | 1 | 44 | 1 | 44 | 3.9e-14 | 87.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene28525 | 0.811314 | 7.45E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene28525 | 0.804643 | 1.96E-49 | -1.69E-46 |
| MS.gene049404 | MS.gene28525 | 0.803313 | 3.70E-49 | -1.69E-46 |
| MS.gene049647 | MS.gene28525 | 0.804792 | 1.82E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene28525 | 0.831134 | 1.98E-55 | -1.69E-46 |
| MS.gene050719 | MS.gene28525 | 0.801844 | 7.43E-49 | -1.69E-46 |
| MS.gene050724 | MS.gene28525 | 0.804207 | 2.41E-49 | -1.69E-46 |
| MS.gene050762 | MS.gene28525 | 0.822762 | 1.99E-53 | -1.69E-46 |
| MS.gene050763 | MS.gene28525 | 0.822873 | 1.88E-53 | -1.69E-46 |
| MS.gene050807 | MS.gene28525 | 0.820908 | 5.35E-53 | -1.69E-46 |
| MS.gene050826 | MS.gene28525 | 0.825099 | 5.64E-54 | -1.69E-46 |
| MS.gene052323 | MS.gene28525 | 0.800966 | 1.12E-48 | -1.69E-46 |
| MS.gene052426 | MS.gene28525 | 0.811368 | 7.25E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene28525 | 0.817825 | 2.70E-52 | -1.69E-46 |
| MS.gene053494 | MS.gene28525 | 0.803034 | 4.23E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene28525 | 0.826168 | 3.15E-54 | -1.69E-46 |
| MS.gene054379 | MS.gene28525 | 0.830094 | 3.56E-55 | -1.69E-46 |
| MS.gene05510 | MS.gene28525 | 0.834046 | 3.76E-56 | -1.69E-46 |
| MS.gene055227 | MS.gene28525 | 0.806325 | 8.69E-50 | -1.69E-46 |
| MS.gene055623 | MS.gene28525 | 0.828025 | 1.13E-54 | -1.69E-46 |
| MS.gene055701 | MS.gene28525 | 0.816893 | 4.37E-52 | -1.69E-46 |
| MS.gene055926 | MS.gene28525 | 0.834593 | 2.74E-56 | -1.69E-46 |
| MS.gene056480 | MS.gene28525 | 0.81325 | 2.81E-51 | -1.69E-46 |
| MS.gene05761 | MS.gene28525 | 0.806879 | 6.64E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene28525 | 0.82334 | 1.46E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene28525 | 0.806216 | 9.16E-50 | -1.69E-46 |
| MS.gene058146 | MS.gene28525 | 0.82462 | 7.31E-54 | -1.69E-46 |
| MS.gene058595 | MS.gene28525 | 0.810454 | 1.14E-50 | -1.69E-46 |
| MS.gene059128 | MS.gene28525 | 0.803005 | 4.28E-49 | -1.69E-46 |
| MS.gene059161 | MS.gene28525 | 0.810764 | 9.80E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene28525 | 0.82527 | 5.14E-54 | -1.69E-46 |
| MS.gene060011 | MS.gene28525 | 0.803662 | 3.13E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene28525 | 0.826246 | 3.01E-54 | -1.69E-46 |
| MS.gene060480 | MS.gene28525 | 0.806165 | 9.39E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene28525 | 0.809114 | 2.22E-50 | -1.69E-46 |
| MS.gene060683 | MS.gene28525 | 0.80172 | 7.88E-49 | -1.69E-46 |
| MS.gene060942 | MS.gene28525 | 0.803879 | 2.82E-49 | -1.69E-46 |
| MS.gene060943 | MS.gene28525 | 0.811989 | 5.31E-51 | -1.69E-46 |
| MS.gene060998 | MS.gene28525 | 0.855427 | 6.36E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28525.t1 | MTR_8g078830 | 97.727 | 44 | 1 | 0 | 1 | 44 | 1 | 44 | 2.33e-23 | 90.5 |
| MS.gene28525.t1 | MTR_5g018680 | 74.419 | 43 | 11 | 0 | 1 | 43 | 1 | 43 | 3.00e-14 | 67.0 |
| MS.gene28525.t1 | MTR_4g068780 | 68.182 | 44 | 14 | 0 | 1 | 44 | 15 | 58 | 1.50e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28525.t1 | AT3G50810 | 63.636 | 44 | 16 | 0 | 1 | 44 | 1 | 44 | 1.99e-13 | 64.7 |
| MS.gene28525.t1 | AT3G50810 | 63.636 | 44 | 16 | 0 | 1 | 44 | 1 | 44 | 1.99e-13 | 64.7 |
| MS.gene28525.t1 | AT3G50810 | 63.636 | 44 | 16 | 0 | 1 | 44 | 1 | 44 | 1.99e-13 | 64.7 |
Find 37 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATGGTTACTCTGCTTTC+TGG | 0.095591 | 8.4:+27893804 | MS.gene28525:CDS |
| CAGAGAAAGTTGAAACATTT+TGG | 0.155943 | 8.4:+27894612 | MS.gene28525:CDS |
| TCAACTTTCTCTGGTGTTTA+TGG | 0.158428 | 8.4:-27894602 | None:intergenic |
| TACGATTACTTTCGGAGATA+TGG | 0.295674 | 8.4:+27895232 | MS.gene28525:CDS |
| CAAAATGTTTCAACTTTCTC+TGG | 0.310351 | 8.4:-27894611 | None:intergenic |
| TGCTTGGATGTTGATTTCTA+TGG | 0.343327 | 8.4:+27893788 | MS.gene28525:CDS |
| CTCCAGCTTTGCTCTTCGAT+TGG | 0.344325 | 8.4:+27893727 | MS.gene28525:CDS |
| GGTGTTTATGGCCGGCTACT+TGG | 0.345172 | 8.4:-27894590 | None:intergenic |
| TGATGGGTTTGGTAATTTCC+TGG | 0.359500 | 8.4:+27895135 | MS.gene28525:CDS |
| GAGGAATTGCCAGGGGTGTT+AGG | 0.368859 | 8.4:+27893698 | MS.gene28525:CDS |
| TTCCTGGAGCACAACACTAT+TGG | 0.376363 | 8.4:+27895151 | MS.gene28525:CDS |
| TCCAGCTTTGCTCTTCGATT+GGG | 0.385905 | 8.4:+27893728 | MS.gene28525:CDS |
| TTTGGTAATGGTGATGGGTT+TGG | 0.404444 | 8.4:+27895124 | MS.gene28525:CDS |
| CACCAATAGTGTTGTGCTCC+AGG | 0.420340 | 8.4:-27895153 | None:intergenic |
| GCCCAATCGAAGAGCAAAGC+TGG | 0.452438 | 8.4:-27893729 | None:intergenic |
| AAAATGAATCTCCGCTGCTT+CGG | 0.454686 | 8.4:-27895209 | None:intergenic |
| GGTGGAATGGAGGAATTGCC+AGG | 0.464393 | 8.4:+27893689 | None:intergenic |
| TCACCATGTTGAAGTGGCCT+TGG | 0.468461 | 8.4:-27894784 | None:intergenic |
| AGAGAATTACGTTGAATTAG+CGG | 0.478315 | 8.4:+27894548 | MS.gene28525:CDS |
| CTTTCTCTGGTGTTTATGGC+CGG | 0.489586 | 8.4:-27894598 | None:intergenic |
| CTGGAGCACAACACTATTGG+TGG | 0.509436 | 8.4:+27895154 | MS.gene28525:CDS |
| TTAGTTTGTTGCCAAGTAGC+CGG | 0.513000 | 8.4:+27894579 | MS.gene28525:CDS |
| TGCTTCAGAAGATGCTGCAA+TGG | 0.533381 | 8.4:+27895047 | MS.gene28525:intron |
| AAGAGAAGCAGAGGAAAAGA+CGG | 0.546272 | 8.4:-27893756 | None:intergenic |
| AAGCAGAGGAAAAGACGGCT+TGG | 0.548579 | 8.4:-27893751 | None:intergenic |
| TGGTAGTGAGATTGCACTAA+GGG | 0.549465 | 8.4:-27894764 | None:intergenic |
| TCATAATCACCATGTTGAAG+TGG | 0.560494 | 8.4:-27894790 | None:intergenic |
| GAGCTTGTTCCTAACACCCC+TGG | 0.567572 | 8.4:-27893707 | None:intergenic |
| CATGAAGAAAAGAGAAGCAG+AGG | 0.574247 | 8.4:-27893765 | None:intergenic |
| TTGGTAGTGAGATTGCACTA+AGG | 0.583096 | 8.4:-27894765 | None:intergenic |
| GAGCACAACACTATTGGTGG+TGG | 0.623288 | 8.4:+27895157 | MS.gene28525:CDS |
| TCAAAAGTGTACCGAAGCAG+CGG | 0.627998 | 8.4:+27895198 | MS.gene28525:CDS |
| GTGGAATGGAGGAATTGCCA+GGG | 0.633206 | 8.4:+27893690 | None:intergenic |
| CTACCAAGGCCACTTCAACA+TGG | 0.636592 | 8.4:+27894781 | MS.gene28525:CDS |
| ATGCTGCAATGGCAATGTCG+CGG | 0.685066 | 8.4:+27895058 | MS.gene28525:CDS |
| TTAGTGCAATCTCACTACCA+AGG | 0.697055 | 8.4:+27894767 | MS.gene28525:CDS |
| TGGAATGGAGGAATTGCCAG+GGG | 0.755495 | 8.4:+27893691 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTATCTTCT+GGG | + | chr8.4:27893872-27893891 | MS.gene28525:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTATCTTC+TGG | + | chr8.4:27893871-27893890 | MS.gene28525:intron | 10.0% |
| !! | CTAAAGAAATAAAAATAGTT+GGG | + | chr8.4:27894041-27894060 | MS.gene28525:intron | 15.0% |
| !! | TAAAGAAATAAAAATAGTTG+GGG | + | chr8.4:27894042-27894061 | MS.gene28525:intron | 15.0% |
| !! | TCTAAAGAAATAAAAATAGT+TGG | + | chr8.4:27894040-27894059 | MS.gene28525:intron | 15.0% |
| !! | AAATACAAGTAAGAAAAAAC+GGG | - | chr8.4:27893956-27893975 | None:intergenic | 20.0% |
| !! | CAAATACAAGTAAGAAAAAA+CGG | - | chr8.4:27893957-27893976 | None:intergenic | 20.0% |
| !! | TAATCTAAAAATGTCAGAAT+TGG | + | chr8.4:27894994-27895013 | MS.gene28525:intron | 20.0% |
| !! | TTGATTGAATTTGTATTGTT+TGG | - | chr8.4:27894893-27894912 | None:intergenic | 20.0% |
| !!! | AATATTATGTTTTGGAAGTT+AGG | + | chr8.4:27894112-27894131 | MS.gene28525:intron | 20.0% |
| !!! | ATTCTGACATTTTTAGATTA+AGG | - | chr8.4:27894994-27895013 | None:intergenic | 20.0% |
| !!! | TGTTTCAACTTTATTTTCAA+AGG | + | chr8.4:27894161-27894180 | MS.gene28525:intron | 20.0% |
| !!! | TTCATTTTTACGATTACTTT+CGG | + | chr8.4:27895224-27895243 | MS.gene28525:CDS | 20.0% |
| ! | AAAATGTCAGAATTGGTAAA+AGG | + | chr8.4:27895001-27895020 | MS.gene28525:intron | 25.0% |
| ! | TCTTAGAGTTAAGCTAATTA+GGG | + | chr8.4:27894083-27894102 | MS.gene28525:intron | 25.0% |
| !! | GGGGTAAAAATATTATGTTT+TGG | + | chr8.4:27894104-27894123 | MS.gene28525:intron | 25.0% |
| !! | TTTTCTTACTTGTATTTGCA+TGG | + | chr8.4:27893959-27893978 | MS.gene28525:intron | 25.0% |
| !!! | ATAAGGTTTTGATTTTTGGT+TGG | + | chr8.4:27894487-27894506 | MS.gene28525:intron | 25.0% |
| !!! | CTTCTATGTCATTTTAAGAA+GGG | + | chr8.4:27894437-27894456 | MS.gene28525:intron | 25.0% |
| !!! | TAAGGTTTTGATTTTTGGTT+GGG | + | chr8.4:27894488-27894507 | MS.gene28525:intron | 25.0% |
| !!! | TGTCATAAGGTTTTGATTTT+TGG | + | chr8.4:27894483-27894502 | MS.gene28525:intron | 25.0% |
| !!! | TTATGAGTTCTGAATATGTT+TGG | + | chr8.4:27893996-27894015 | MS.gene28525:intron | 25.0% |
| !!! | TTGAAACATTTTGGCATTAT+CGG | + | chr8.4:27894621-27894640 | MS.gene28525:CDS | 25.0% |
| AGAGAATTACGTTGAATTAG+CGG | + | chr8.4:27894548-27894567 | MS.gene28525:CDS | 30.0% | |
| CAAAATGTTTCAACTTTCTC+TGG | - | chr8.4:27894614-27894633 | None:intergenic | 30.0% | |
| CTTAGAGTTAAGCTAATTAG+GGG | + | chr8.4:27894084-27894103 | MS.gene28525:intron | 30.0% | |
| GTCTTAGAGTTAAGCTAATT+AGG | + | chr8.4:27894082-27894101 | MS.gene28525:intron | 30.0% | |
| TGTCTGACATATTTCAATGT+TGG | - | chr8.4:27894316-27894335 | None:intergenic | 30.0% | |
| TTAGAGTTAAGCTAATTAGG+GGG | + | chr8.4:27894085-27894104 | MS.gene28525:intron | 30.0% | |
| TTATAGCTGATAGCTTAGAA+CGG | - | chr8.4:27894925-27894944 | None:intergenic | 30.0% | |
| TTCAGAACTCATAAAATCAC+TGG | - | chr8.4:27893990-27894009 | None:intergenic | 30.0% | |
| ! | AAATAGTTGGGGATTTTACA+AGG | + | chr8.4:27894053-27894072 | MS.gene28525:intron | 30.0% |
| ! | ATGTACACTGGTCTAATTAT+AGG | + | chr8.4:27894375-27894394 | MS.gene28525:intron | 30.0% |
| ! | CAGAGAAAGTTGAAACATTT+TGG | + | chr8.4:27894612-27894631 | MS.gene28525:CDS | 30.0% |
| ! | CATTGATTAGCAATGTCATA+AGG | + | chr8.4:27894470-27894489 | MS.gene28525:intron | 30.0% |
| ! | TCAGAATTGGTAAAAGGTTT+TGG | + | chr8.4:27895007-27895026 | MS.gene28525:intron | 30.0% |
| !!! | AAGGTTTTGATTTTTGGTTG+GGG | + | chr8.4:27894489-27894508 | MS.gene28525:intron | 30.0% |
| !!! | GCTTCTATGTCATTTTAAGA+AGG | + | chr8.4:27894436-27894455 | MS.gene28525:intron | 30.0% |
| ACAGCTTCAATATGAAGTGT+CGG | + | chr8.4:27894342-27894361 | MS.gene28525:intron | 35.0% | |
| ATGAAGCACAGACACATATA+CGG | + | chr8.4:27894202-27894221 | MS.gene28525:intron | 35.0% | |
| CTTACTTGTATTTGCATGGT+GGG | + | chr8.4:27893963-27893982 | MS.gene28525:intron | 35.0% | |
| CTTCATATTGAAGCTGTGTT+TGG | - | chr8.4:27894339-27894358 | None:intergenic | 35.0% | |
| TAAGATTGCAAAAACAGTGC+TGG | - | chr8.4:27894718-27894737 | None:intergenic | 35.0% | |
| TACGATTACTTTCGGAGATA+TGG | + | chr8.4:27895232-27895251 | MS.gene28525:CDS | 35.0% | |
| TCAACTTTCTCTGGTGTTTA+TGG | - | chr8.4:27894605-27894624 | None:intergenic | 35.0% | |
| TCATAATCACCATGTTGAAG+TGG | - | chr8.4:27894793-27894812 | None:intergenic | 35.0% | |
| TCTTACTTGTATTTGCATGG+TGG | + | chr8.4:27893962-27893981 | MS.gene28525:intron | 35.0% | |
| ! | TCTGTTATTGCACAGCTTTT+TGG | + | chr8.4:27895106-27895125 | MS.gene28525:CDS | 35.0% |
| ! | TTCTCTTTTCTTCATGTGCT+TGG | + | chr8.4:27893772-27893791 | MS.gene28525:CDS | 35.0% |
| !! | ATTGCACAGCTTTTTGGTAA+TGG | + | chr8.4:27895112-27895131 | MS.gene28525:CDS | 35.0% |
| !! | GAGTTCTGAATATGTTTGGT+AGG | + | chr8.4:27894000-27894019 | MS.gene28525:intron | 35.0% |
| !! | TGCTTGGATGTTGATTTCTA+TGG | + | chr8.4:27893788-27893807 | MS.gene28525:CDS | 35.0% |
| !!! | AGCTTTTTGGTAATGGTGAT+GGG | + | chr8.4:27895119-27895138 | MS.gene28525:CDS | 35.0% |
| AAAATGAATCTCCGCTGCTT+CGG | - | chr8.4:27895212-27895231 | None:intergenic | 40.0% | |
| AAGAGAAGCAGAGGAAAAGA+CGG | - | chr8.4:27893759-27893778 | None:intergenic | 40.0% | |
| AGACCAGTGTACATCAATGT+AGG | - | chr8.4:27894369-27894388 | None:intergenic | 40.0% | |
| CATGAAGAAAAGAGAAGCAG+AGG | - | chr8.4:27893768-27893787 | None:intergenic | 40.0% | |
| TCTATGGTTACTCTGCTTTC+TGG | + | chr8.4:27893804-27893823 | MS.gene28525:CDS | 40.0% | |
| TTAGTGCAATCTCACTACCA+AGG | + | chr8.4:27894767-27894786 | MS.gene28525:CDS | 40.0% | |
| TTCAATGTTGGACACTGTCA+CGG | - | chr8.4:27894304-27894323 | None:intergenic | 40.0% | |
| ! | TGGTAGTGAGATTGCACTAA+GGG | - | chr8.4:27894767-27894786 | None:intergenic | 40.0% |
| !! | ACATTTTGGCATTATCGGAG+AGG | + | chr8.4:27894626-27894645 | MS.gene28525:CDS | 40.0% |
| !! | TGATGGGTTTGGTAATTTCC+TGG | + | chr8.4:27895135-27895154 | MS.gene28525:CDS | 40.0% |
| !! | TTAGTTTGTTGCCAAGTAGC+CGG | + | chr8.4:27894579-27894598 | MS.gene28525:CDS | 40.0% |
| !! | TTGGTAGTGAGATTGCACTA+AGG | - | chr8.4:27894768-27894787 | None:intergenic | 40.0% |
| !! | TTTGGTAATGGTGATGGGTT+TGG | + | chr8.4:27895124-27895143 | MS.gene28525:CDS | 40.0% |
| !!! | CAGCTTTTTGGTAATGGTGA+TGG | + | chr8.4:27895118-27895137 | MS.gene28525:CDS | 40.0% |
| CTGTGCTTCATAGCGAGTAT+TGG | - | chr8.4:27894193-27894212 | None:intergenic | 45.0% | |
| CTTTCTCTGGTGTTTATGGC+CGG | - | chr8.4:27894601-27894620 | None:intergenic | 45.0% | |
| GGACCTACATTGATGTACAC+TGG | + | chr8.4:27894363-27894382 | MS.gene28525:intron | 45.0% | |
| TCCAGCTTTGCTCTTCGATT+GGG | + | chr8.4:27893728-27893747 | MS.gene28525:CDS | 45.0% | |
| TGCTTCAGAAGATGCTGCAA+TGG | + | chr8.4:27895047-27895066 | MS.gene28525:intron | 45.0% | |
| TTCCTGGAGCACAACACTAT+TGG | + | chr8.4:27895151-27895170 | MS.gene28525:CDS | 45.0% | |
| ! | TCAAAAGTGTACCGAAGCAG+CGG | + | chr8.4:27895198-27895217 | MS.gene28525:CDS | 45.0% |
| !! | ATTGCAGCATCTTCTGAAGC+AGG | - | chr8.4:27895048-27895067 | None:intergenic | 45.0% |
| AAGCAGAGGAAAAGACGGCT+TGG | - | chr8.4:27893754-27893773 | None:intergenic | 50.0% | |
| ATGCTGCAATGGCAATGTCG+CGG | + | chr8.4:27895058-27895077 | MS.gene28525:CDS | 50.0% | |
| CACCAATAGTGTTGTGCTCC+AGG | - | chr8.4:27895156-27895175 | None:intergenic | 50.0% | |
| CTACCAAGGCCACTTCAACA+TGG | + | chr8.4:27894781-27894800 | MS.gene28525:CDS | 50.0% | |
| CTCCAGCTTTGCTCTTCGAT+TGG | + | chr8.4:27893727-27893746 | MS.gene28525:CDS | 50.0% | |
| CTGGAGCACAACACTATTGG+TGG | + | chr8.4:27895154-27895173 | MS.gene28525:CDS | 50.0% | |
| GAGCACAACACTATTGGTGG+TGG | + | chr8.4:27895157-27895176 | MS.gene28525:CDS | 50.0% | |
| TCACCATGTTGAAGTGGCCT+TGG | - | chr8.4:27894787-27894806 | None:intergenic | 50.0% | |
| GCCCAATCGAAGAGCAAAGC+TGG | - | chr8.4:27893732-27893751 | None:intergenic | 55.0% | |
| GGTGTTTATGGCCGGCTACT+TGG | - | chr8.4:27894593-27894612 | None:intergenic | 55.0% | |
| ! | GAGCTTGTTCCTAACACCCC+TGG | - | chr8.4:27893710-27893729 | None:intergenic | 55.0% |
| !! | GAGGAATTGCCAGGGGTGTT+AGG | + | chr8.4:27893698-27893717 | MS.gene28525:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 27893695 | 27895285 | 27893695 | ID=MS.gene28525 |
| chr8.4 | mRNA | 27893695 | 27895285 | 27893695 | ID=MS.gene28525.t1;Parent=MS.gene28525 |
| chr8.4 | exon | 27893695 | 27893825 | 27893695 | ID=MS.gene28525.t1.exon1;Parent=MS.gene28525.t1 |
| chr8.4 | CDS | 27893695 | 27893825 | 27893695 | ID=cds.MS.gene28525.t1;Parent=MS.gene28525.t1 |
| chr8.4 | exon | 27894545 | 27894667 | 27894545 | ID=MS.gene28525.t1.exon2;Parent=MS.gene28525.t1 |
| chr8.4 | CDS | 27894545 | 27894667 | 27894545 | ID=cds.MS.gene28525.t1;Parent=MS.gene28525.t1 |
| chr8.4 | exon | 27894763 | 27894802 | 27894763 | ID=MS.gene28525.t1.exon3;Parent=MS.gene28525.t1 |
| chr8.4 | CDS | 27894763 | 27894802 | 27894763 | ID=cds.MS.gene28525.t1;Parent=MS.gene28525.t1 |
| chr8.4 | exon | 27895055 | 27895285 | 27895055 | ID=MS.gene28525.t1.exon4;Parent=MS.gene28525.t1 |
| chr8.4 | CDS | 27895055 | 27895285 | 27895055 | ID=cds.MS.gene28525.t1;Parent=MS.gene28525.t1 |
| Gene Sequence |
| Protein sequence |
