Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30792.t1 | XP_024637690.1 | 89.4 | 236 | 10 | 1 | 189 | 409 | 216 | 451 | 6.90E-111 | 411 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30792.t1 | A0A072URA5 | 89.0 | 236 | 9 | 2 | 189 | 409 | 216 | 449 | 6.1e-109 | 404.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene30792 | -0.829642 | 4.59E-55 | -1.69E-46 |
| MS.gene04917 | MS.gene30792 | -0.819675 | 1.03E-52 | -1.69E-46 |
| MS.gene049703 | MS.gene30792 | 0.819948 | 8.88E-53 | -1.69E-46 |
| MS.gene049822 | MS.gene30792 | -0.813416 | 2.59E-51 | -1.69E-46 |
| MS.gene050114 | MS.gene30792 | -0.806557 | 7.76E-50 | -1.69E-46 |
| MS.gene050317 | MS.gene30792 | -0.826964 | 2.03E-54 | -1.69E-46 |
| MS.gene050320 | MS.gene30792 | -0.80588 | 1.08E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene30792 | 0.803684 | 3.10E-49 | -1.69E-46 |
| MS.gene050762 | MS.gene30792 | -0.803306 | 3.71E-49 | -1.69E-46 |
| MS.gene050763 | MS.gene30792 | -0.802727 | 4.89E-49 | -1.69E-46 |
| MS.gene051063 | MS.gene30792 | -0.801808 | 7.56E-49 | -1.69E-46 |
| MS.gene051245 | MS.gene30792 | -0.844986 | 5.38E-59 | -1.69E-46 |
| MS.gene051748 | MS.gene30792 | -0.803116 | 4.06E-49 | -1.69E-46 |
| MS.gene052242 | MS.gene30792 | 0.806234 | 9.08E-50 | -1.69E-46 |
| MS.gene052302 | MS.gene30792 | -0.802426 | 5.64E-49 | -1.69E-46 |
| MS.gene052309 | MS.gene30792 | 0.805914 | 1.06E-49 | -1.69E-46 |
| MS.gene052527 | MS.gene30792 | -0.808071 | 3.71E-50 | -1.69E-46 |
| MS.gene052818 | MS.gene30792 | 0.808282 | 3.34E-50 | -1.69E-46 |
| MS.gene052970 | MS.gene30792 | 0.801636 | 8.20E-49 | -1.69E-46 |
| MS.gene053109 | MS.gene30792 | -0.80652 | 7.91E-50 | -1.69E-46 |
| MS.gene055174 | MS.gene30792 | -0.845147 | 4.87E-59 | -1.69E-46 |
| MS.gene056464 | MS.gene30792 | 0.801348 | 9.39E-49 | -1.69E-46 |
| MS.gene056752 | MS.gene30792 | -0.825329 | 4.97E-54 | -1.69E-46 |
| MS.gene056849 | MS.gene30792 | -0.829176 | 5.96E-55 | -1.69E-46 |
| MS.gene057057 | MS.gene30792 | -0.809697 | 1.66E-50 | -1.69E-46 |
| MS.gene057234 | MS.gene30792 | -0.809992 | 1.44E-50 | -1.69E-46 |
| MS.gene057451 | MS.gene30792 | 0.886353 | 3.68E-72 | -1.69E-46 |
| MS.gene057452 | MS.gene30792 | 0.898988 | 3.09E-77 | -1.69E-46 |
| MS.gene057999 | MS.gene30792 | -0.815337 | 9.73E-52 | -1.69E-46 |
| MS.gene058074 | MS.gene30792 | -0.800928 | 1.15E-48 | -1.69E-46 |
| MS.gene058182 | MS.gene30792 | -0.810359 | 1.20E-50 | -1.69E-46 |
| MS.gene058238 | MS.gene30792 | -0.816299 | 5.94E-52 | -1.69E-46 |
| MS.gene058654 | MS.gene30792 | -0.804673 | 1.93E-49 | -1.69E-46 |
| MS.gene058661 | MS.gene30792 | 0.837997 | 3.73E-57 | -1.69E-46 |
| MS.gene059872 | MS.gene30792 | 0.86119 | 1.22E-63 | -1.69E-46 |
| MS.gene060084 | MS.gene30792 | -0.830243 | 3.28E-55 | -1.69E-46 |
| MS.gene060297 | MS.gene30792 | -0.826464 | 2.67E-54 | -1.69E-46 |
| MS.gene060563 | MS.gene30792 | -0.803171 | 3.96E-49 | -1.69E-46 |
| MS.gene060869 | MS.gene30792 | -0.844639 | 6.67E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30792.t1 | MTR_4g117570 | 88.983 | 236 | 9 | 2 | 189 | 409 | 216 | 449 | 4.93e-144 | 424 |
| MS.gene30792.t1 | MTR_2g021260 | 61.644 | 219 | 51 | 4 | 189 | 392 | 216 | 416 | 1.21e-77 | 251 |
| MS.gene30792.t1 | MTR_4g134350 | 38.674 | 181 | 89 | 5 | 191 | 351 | 219 | 397 | 8.64e-27 | 111 |
| MS.gene30792.t1 | MTR_4g134350 | 47.244 | 127 | 48 | 3 | 191 | 298 | 219 | 345 | 2.86e-26 | 110 |
| MS.gene30792.t1 | MTR_4g134350 | 47.244 | 127 | 48 | 3 | 191 | 298 | 219 | 345 | 4.68e-26 | 110 |
| MS.gene30792.t1 | MTR_2g027870 | 59.740 | 77 | 31 | 0 | 189 | 265 | 272 | 348 | 2.59e-24 | 105 |
| MS.gene30792.t1 | MTR_6g464540 | 83.929 | 56 | 8 | 1 | 91 | 145 | 271 | 326 | 1.69e-21 | 95.9 |
| MS.gene30792.t1 | MTR_8g098290 | 65.455 | 55 | 19 | 0 | 91 | 145 | 370 | 424 | 3.51e-14 | 75.1 |
| MS.gene30792.t1 | MTR_8g098290 | 65.455 | 55 | 19 | 0 | 91 | 145 | 370 | 424 | 3.99e-14 | 74.3 |
| MS.gene30792.t1 | MTR_5g010190 | 58.182 | 55 | 23 | 0 | 91 | 145 | 368 | 422 | 7.41e-13 | 70.9 |
| MS.gene30792.t1 | MTR_5g010190 | 58.182 | 55 | 23 | 0 | 91 | 145 | 368 | 422 | 8.44e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30792.t1 | AT4G14290 | 57.759 | 232 | 79 | 4 | 189 | 405 | 66 | 293 | 2.90e-80 | 254 |
| MS.gene30792.t1 | AT4G14290 | 57.759 | 232 | 79 | 4 | 189 | 405 | 101 | 328 | 6.38e-80 | 254 |
| MS.gene30792.t1 | AT4G14290 | 57.759 | 232 | 79 | 4 | 189 | 405 | 162 | 389 | 4.35e-79 | 254 |
| MS.gene30792.t1 | AT4G14290 | 57.265 | 234 | 81 | 4 | 189 | 407 | 216 | 445 | 9.28e-79 | 253 |
| MS.gene30792.t1 | AT3G23540 | 55.042 | 238 | 85 | 4 | 189 | 408 | 73 | 306 | 1.10e-78 | 250 |
| MS.gene30792.t1 | AT4G14290 | 57.265 | 234 | 81 | 4 | 189 | 407 | 216 | 445 | 2.50e-78 | 253 |
| MS.gene30792.t1 | AT3G23540 | 55.042 | 238 | 85 | 4 | 189 | 408 | 189 | 422 | 4.69e-77 | 249 |
| MS.gene30792.t1 | AT3G23540 | 55.042 | 238 | 85 | 4 | 189 | 408 | 216 | 449 | 1.08e-76 | 249 |
| MS.gene30792.t1 | AT4G17150 | 60.294 | 68 | 27 | 0 | 189 | 256 | 202 | 269 | 6.67e-22 | 98.2 |
| MS.gene30792.t1 | AT4G17150 | 60.294 | 68 | 27 | 0 | 189 | 256 | 226 | 293 | 6.73e-22 | 97.4 |
| MS.gene30792.t1 | AT4G17150 | 60.294 | 68 | 27 | 0 | 189 | 256 | 226 | 293 | 6.73e-22 | 97.4 |
| MS.gene30792.t1 | AT4G17150 | 60.294 | 68 | 27 | 0 | 189 | 256 | 226 | 293 | 8.79e-22 | 97.4 |
| MS.gene30792.t1 | AT4G17150 | 60.294 | 68 | 27 | 0 | 189 | 256 | 226 | 293 | 1.04e-21 | 97.8 |
Find 109 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGCTATAATTCTGATAATT+TGG | 0.151042 | 6.4:-39300034 | None:intergenic |
| TAGCGAAAAGCTACAAAATT+TGG | 0.175808 | 6.4:+39300051 | MS.gene30792:CDS |
| TGTTTGGTTCCAGCTCTATT+AGG | 0.257508 | 6.4:+39301026 | MS.gene30792:CDS |
| CTCAAGGTGGTTGGATTTCA+TGG | 0.271540 | 6.4:+39299413 | MS.gene30792:CDS |
| GTTTGGTTCCAGCTCTATTA+GGG | 0.290817 | 6.4:+39301027 | MS.gene30792:CDS |
| CACATAATGGTTGAGGTGAT+TGG | 0.313320 | 6.4:+39299453 | MS.gene30792:CDS |
| CAGTACTGTAGATGCTATTA+AGG | 0.316481 | 6.4:+39301801 | MS.gene30792:CDS |
| AAATTTGGCATTTAATCTTA+AGG | 0.333006 | 6.4:+39300066 | MS.gene30792:CDS |
| CATCCTGCTCATTGGCCGTT+TGG | 0.334399 | 6.4:-39301833 | None:intergenic |
| TTGTCAGATGGTCATCCTTA+TGG | 0.348703 | 6.4:+39302610 | MS.gene30792:CDS |
| TCTTTCTTCCTCCTCTGCAC+TGG | 0.372065 | 6.4:-39302707 | None:intergenic |
| GTATGATATTCAGATGTTAA+TGG | 0.372335 | 6.4:+39302827 | MS.gene30792:intron |
| TGGAGATCTGTGCACGAATT+AGG | 0.376826 | 6.4:+39301632 | MS.gene30792:CDS |
| GCAGGTAGCAAAATCTTGTT+TGG | 0.384892 | 6.4:+39301010 | MS.gene30792:intron |
| GCTGGTGGTTGTTCTGCCTT+CGG | 0.399267 | 6.4:-39302891 | None:intergenic |
| TATCAACTTGAAGACCTTGC+AGG | 0.403667 | 6.4:+39302676 | MS.gene30792:CDS |
| CATCCAACACGGTGGGTACA+TGG | 0.408172 | 6.4:-39302636 | None:intergenic |
| ACATAATGGTTGAGGTGATT+GGG | 0.413574 | 6.4:+39299454 | MS.gene30792:CDS |
| TGTTCAAGCTGTAGTTGCTT+TGG | 0.418003 | 6.4:+39299985 | MS.gene30792:CDS |
| TCACTCTGATCGTATATTTG+AGG | 0.447447 | 6.4:+39301082 | MS.gene30792:CDS |
| CCCCTCCAACTCCAGCTGGT+TGG | 0.469982 | 6.4:-39299494 | None:intergenic |
| TCGTATATTTGAGGCTTACA+TGG | 0.472947 | 6.4:+39301091 | MS.gene30792:CDS |
| CAGTCTATCGCAGTACTTGA+GGG | 0.474731 | 6.4:+39300711 | MS.gene30792:intron |
| TAAGCTCAATCACCACATAA+TGG | 0.476659 | 6.4:+39299440 | MS.gene30792:CDS |
| CAAACCTCCATCCTGCTCAT+TGG | 0.479086 | 6.4:-39301841 | None:intergenic |
| TCTTCCTCCTCTGCACTGGA+TGG | 0.479687 | 6.4:-39302703 | None:intergenic |
| ACAGCTTGAACAGCAACATC+TGG | 0.480099 | 6.4:-39299974 | None:intergenic |
| TCTACAGTACTGCTAGTTGA+TGG | 0.481450 | 6.4:-39301790 | None:intergenic |
| GGACGTTCGAGCAACATCTC+GGG | 0.481980 | 6.4:+39298993 | MS.gene30792:CDS |
| TCCAGCTGGTTGGATTTCAC+AGG | 0.483663 | 6.4:-39299484 | None:intergenic |
| GTGGGTACATGGGGACCATA+AGG | 0.484951 | 6.4:-39302625 | None:intergenic |
| TCCAACCACCTTGAGCTGGC+GGG | 0.484987 | 6.4:-39299405 | None:intergenic |
| GATGTTAATGGAAGCAGTAA+TGG | 0.488225 | 6.4:+39302839 | MS.gene30792:intron |
| GTTCCAAACGGCCAATGAGC+AGG | 0.490303 | 6.4:+39301830 | MS.gene30792:CDS |
| TGACAATTCAAAGCTTATCA+TGG | 0.492892 | 6.4:-39302593 | None:intergenic |
| CCAACCACCTTGAGCTGGCG+GGG | 0.494486 | 6.4:-39299404 | None:intergenic |
| CCCCGCCAGCTCAAGGTGGT+TGG | 0.497290 | 6.4:+39299404 | MS.gene30792:CDS |
| CCGTCGAAGATAAGTATGTT+TGG | 0.498790 | 6.4:-39300468 | None:intergenic |
| TCCTACCAGGTGTTGAACCC+TGG | 0.500564 | 6.4:+39298972 | MS.gene30792:intron |
| ATCCAACCAGCTGGAGTTGG+AGG | 0.505298 | 6.4:+39299492 | MS.gene30792:CDS |
| CAAATATACGATCAGAGTGA+TGG | 0.507653 | 6.4:-39301079 | None:intergenic |
| ACTTGATGAGGGCATTCTGC+AGG | 0.514470 | 6.4:-39299031 | None:intergenic |
| GCCGTGTTCTTTATCTTCGA+CGG | 0.515974 | 6.4:+39300495 | MS.gene30792:CDS |
| TTGTATAAAATCATTGTCAA+TGG | 0.516700 | 6.4:-39301054 | None:intergenic |
| ATCCAACACGGTGGGTACAT+GGG | 0.517832 | 6.4:-39302635 | None:intergenic |
| CCCTGTGAAATCCAACCAGC+TGG | 0.518840 | 6.4:+39299483 | MS.gene30792:CDS |
| GAGATGTTGCTCGAACGTCC+AGG | 0.520762 | 6.4:-39298990 | None:intergenic |
| CCAGTCTATCGCAGTACTTG+AGG | 0.524847 | 6.4:+39300710 | MS.gene30792:intron |
| TTTCTATTTCTCACTTGATG+AGG | 0.524933 | 6.4:-39299043 | None:intergenic |
| AAATATACGATCAGAGTGAT+GGG | 0.528350 | 6.4:-39301078 | None:intergenic |
| TGGACGTTCGAGCAACATCT+CGG | 0.532148 | 6.4:+39298992 | MS.gene30792:CDS |
| CGAAGATAAGTATGTTTGGA+TGG | 0.534188 | 6.4:-39300464 | None:intergenic |
| ATGGCATGCCCTAATAGAGC+TGG | 0.538904 | 6.4:-39301035 | None:intergenic |
| TCTGCAACCTCCTGAGGATG+AGG | 0.539377 | 6.4:+39301469 | MS.gene30792:CDS |
| GAAATCCAACCAGCTGGAGT+TGG | 0.541320 | 6.4:+39299489 | MS.gene30792:CDS |
| GATTCACCAACCTCATCCTC+AGG | 0.541847 | 6.4:-39301479 | None:intergenic |
| ATCCAACCACCTTGAGCTGG+CGG | 0.544053 | 6.4:-39299406 | None:intergenic |
| GCATGCAGAAACAAGACAAA+GGG | 0.545031 | 6.4:+39299806 | MS.gene30792:intron |
| AGATGAACAAAGTGTTAATG+AGG | 0.548504 | 6.4:+39302206 | MS.gene30792:CDS |
| TATCATGGATGAAGAGGGTG+GGG | 0.549659 | 6.4:-39302578 | None:intergenic |
| CAGATACATAGCAATACTAC+TGG | 0.550822 | 6.4:-39302913 | None:intergenic |
| TTCTATTTCTCACTTGATGA+GGG | 0.551533 | 6.4:-39299042 | None:intergenic |
| CAATCACCACATAATGGTTG+AGG | 0.552542 | 6.4:+39299446 | MS.gene30792:CDS |
| CAATGTTCTGCAACCTCCTG+AGG | 0.553134 | 6.4:+39301463 | MS.gene30792:CDS |
| CTAGAGGCCCCGCCAGCTCA+AGG | 0.553457 | 6.4:+39299397 | MS.gene30792:CDS |
| GAAATCCAACCACCTTGAGC+TGG | 0.553841 | 6.4:-39299409 | None:intergenic |
| GACTCTTTACTCAGGATGCA+TGG | 0.555592 | 6.4:+39301612 | MS.gene30792:intron |
| TACATAGCAATACTACTGGC+TGG | 0.558156 | 6.4:-39302909 | None:intergenic |
| TGCTATGAAGACCATTGAAA+GGG | 0.560225 | 6.4:+39299518 | MS.gene30792:CDS |
| GCAGCCCCTCCAACTCCAGC+TGG | 0.562321 | 6.4:-39299498 | None:intergenic |
| TGTGAGTCATCTTTATCTGA+TGG | 0.570709 | 6.4:-39302941 | None:intergenic |
| CTGCTATGAAGACCATTGAA+AGG | 0.572174 | 6.4:+39299517 | MS.gene30792:CDS |
| AAAGCTTATCATGGATGAAG+AGG | 0.577943 | 6.4:-39302584 | None:intergenic |
| ATAAGCTTTGAATTGTCAGA+TGG | 0.579614 | 6.4:+39302598 | MS.gene30792:CDS |
| GGCACAGCCGTGTTCGACAA+TGG | 0.583924 | 6.4:+39300516 | MS.gene30792:CDS |
| AATGGAGTCACTGAAGGACC+TGG | 0.585649 | 6.4:+39302857 | MS.gene30792:CDS |
| TCCAACCAGCTGGAGTTGGA+GGG | 0.585820 | 6.4:+39299493 | MS.gene30792:CDS |
| AGATGTTGCTCGAACGTCCA+GGG | 0.586189 | 6.4:-39298989 | None:intergenic |
| TCAAAGTAAAACTGAGGACG+TGG | 0.589417 | 6.4:-39301419 | None:intergenic |
| AGATGACTCACATTCTTCAC+AGG | 0.589430 | 6.4:+39302952 | MS.gene30792:CDS |
| TCCAACACGGTGGGTACATG+GGG | 0.595552 | 6.4:-39302634 | None:intergenic |
| TTATCATGGATGAAGAGGGT+GGG | 0.596440 | 6.4:-39302579 | None:intergenic |
| CCAGCTGGTTGGATTTCACA+GGG | 0.599712 | 6.4:-39299483 | None:intergenic |
| CAATCACCTCAACCATTATG+TGG | 0.600044 | 6.4:-39299452 | None:intergenic |
| CAAACGGCCAATGAGCAGGA+TGG | 0.600542 | 6.4:+39301834 | MS.gene30792:CDS |
| CCAACCAGCTGGAGTTGGAG+GGG | 0.601769 | 6.4:+39299494 | MS.gene30792:CDS |
| CACTGGATGGAAAACCTGCA+AGG | 0.604166 | 6.4:-39302690 | None:intergenic |
| TTAAGGAAGTCAGTTCCAAA+CGG | 0.604253 | 6.4:+39301818 | MS.gene30792:CDS |
| CCAAACATACTTATCTTCGA+CGG | 0.613188 | 6.4:+39300468 | MS.gene30792:CDS |
| AGCAGTAATGGAGTCACTGA+AGG | 0.616451 | 6.4:+39302851 | MS.gene30792:CDS |
| TCCCCATGTACCCACCGTGT+TGG | 0.619550 | 6.4:+39302633 | MS.gene30792:CDS |
| CCTATCAGTGGTCTTACTAG+AGG | 0.620766 | 6.4:+39299381 | MS.gene30792:intron |
| CTTATCATGGATGAAGAGGG+TGG | 0.623493 | 6.4:-39302580 | None:intergenic |
| GACGTTCGAGCAACATCTCG+GGG | 0.625519 | 6.4:+39298994 | MS.gene30792:CDS |
| GTTGGATGACAATCAGTATG+TGG | 0.637267 | 6.4:+39302651 | MS.gene30792:CDS |
| TGTGCAACCATTGTCGAACA+CGG | 0.639569 | 6.4:-39300523 | None:intergenic |
| AAGCTTATCATGGATGAAGA+GGG | 0.643532 | 6.4:-39302583 | None:intergenic |
| ACGGCCAATGAGCAGGATGG+AGG | 0.644801 | 6.4:+39301837 | MS.gene30792:CDS |
| AGCATGCAGAAACAAGACAA+AGG | 0.645520 | 6.4:+39299805 | MS.gene30792:intron |
| CCTGGAAGTACAAAATCCGA+AGG | 0.656273 | 6.4:+39302875 | MS.gene30792:CDS |
| ATGGAATCAAAGTAAAACTG+AGG | 0.668425 | 6.4:-39301425 | None:intergenic |
| TGATTGTCATCCAACACGGT+GGG | 0.675098 | 6.4:-39302643 | None:intergenic |
| AATATACGATCAGAGTGATG+GGG | 0.677083 | 6.4:-39301077 | None:intergenic |
| TCACCAACCTCATCCTCAGG+AGG | 0.681966 | 6.4:-39301476 | None:intergenic |
| GAGGCCCCGCCAGCTCAAGG+TGG | 0.691227 | 6.4:+39299400 | MS.gene30792:CDS |
| CTGATTGTCATCCAACACGG+TGG | 0.711872 | 6.4:-39302644 | None:intergenic |
| ATACTGATTGTCATCCAACA+CGG | 0.712282 | 6.4:-39302647 | None:intergenic |
| ATAGCAATACTACTGGCTGG+TGG | 0.719984 | 6.4:-39302906 | None:intergenic |
| GCCGTCGAAGATAAAGAACA+CGG | 0.722857 | 6.4:-39300496 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTAAAAAAAAAAAAAA+AGG | - | chr6.4:39300326-39300345 | None:intergenic | 0.0% |
| !! | AAAAACATAATTAAATTTGA+GGG | + | chr6.4:39301383-39301402 | MS.gene30792:CDS | 10.0% |
| !! | ATTAAAAAAAAGGATAAAAA+AGG | - | chr6.4:39302237-39302256 | None:intergenic | 10.0% |
| !!! | TAATCATTTTTTATAGAAAA+AGG | - | chr6.4:39301136-39301155 | None:intergenic | 10.0% |
| !!! | TTGTTTTAAATAAAAATATG+AGG | - | chr6.4:39302113-39302132 | None:intergenic | 10.0% |
| !! | AAATAATGAAAGAATATGAT+GGG | - | chr6.4:39300981-39301000 | None:intergenic | 15.0% |
| !! | CAAAAACATAATTAAATTTG+AGG | + | chr6.4:39301382-39301401 | MS.gene30792:CDS | 15.0% |
| !! | GAAGAAATAATTAAGAAATT+AGG | - | chr6.4:39301704-39301723 | None:intergenic | 15.0% |
| !! | TAACATACATGAAAAAAAAA+AGG | + | chr6.4:39302774-39302793 | MS.gene30792:intron | 15.0% |
| !! | TAATTCAAATATCTAACTTT+AGG | + | chr6.4:39302453-39302472 | MS.gene30792:intron | 15.0% |
| !!! | GACTTATTTTATAATTTTGA+AGG | - | chr6.4:39301241-39301260 | None:intergenic | 15.0% |
| !!! | TATATTTGCTATAAGATTAT+TGG | + | chr6.4:39302298-39302317 | MS.gene30792:intron | 15.0% |
| !! | AAATAAAAATATGAGGAGAA+CGG | - | chr6.4:39302106-39302125 | None:intergenic | 20.0% |
| !! | AAATTTGGCATTTAATCTTA+AGG | + | chr6.4:39300066-39300085 | MS.gene30792:CDS | 20.0% |
| !! | AAATTTGTATTTGAATTCTG+TGG | + | chr6.4:39302131-39302150 | MS.gene30792:intron | 20.0% |
| !! | ATTGTGAAAAAAGATGTTTA+TGG | - | chr6.4:39301447-39301466 | None:intergenic | 20.0% |
| !! | CAAATAATGAAAGAATATGA+TGG | - | chr6.4:39300982-39301001 | None:intergenic | 20.0% |
| !! | CTTAAATGTTTATTTGTAGA+AGG | + | chr6.4:39300125-39300144 | MS.gene30792:intron | 20.0% |
| !! | CTTCTACAAATAAACATTTA+AGG | - | chr6.4:39300127-39300146 | None:intergenic | 20.0% |
| !! | TAAATAAAAATATGAGGAGA+CGG | - | chr6.4:39302080-39302099 | None:intergenic | 20.0% |
| !! | TAATTAAGAAATTAGGTACT+TGG | - | chr6.4:39301697-39301716 | None:intergenic | 20.0% |
| !! | TTAATAGCGTAAAATTTACA+TGG | - | chr6.4:39300369-39300388 | None:intergenic | 20.0% |
| !! | TTGTATAAAATCATTGTCAA+TGG | - | chr6.4:39301057-39301076 | None:intergenic | 20.0% |
| !!! | CAGTGAAATTTTATCAAAAA+TGG | - | chr6.4:39301566-39301585 | None:intergenic | 20.0% |
| !!! | CGGTTTTAAATAAAAATATG+AGG | - | chr6.4:39302086-39302105 | None:intergenic | 20.0% |
| !!! | GAAACAAATAATATTGCTTT+TGG | + | chr6.4:39300894-39300913 | MS.gene30792:intron | 20.0% |
| !!! | TTCATCTATGATTTTAGAAA+AGG | + | chr6.4:39299278-39299297 | MS.gene30792:intron | 20.0% |
| !!! | TTTTTTCATGTATGTTAATC+AGG | - | chr6.4:39302771-39302790 | None:intergenic | 20.0% |
| ! | AAAAGCAATATATGATCAAG+AGG | - | chr6.4:39300934-39300953 | None:intergenic | 25.0% |
| ! | AAAGCAATATATGATCAAGA+GGG | - | chr6.4:39300933-39300952 | None:intergenic | 25.0% |
| ! | AAATAAAAATATGAGGAGAC+GGG | - | chr6.4:39302079-39302098 | None:intergenic | 25.0% |
| ! | AAGCAACTTTAAACATCTAA+AGG | - | chr6.4:39301263-39301282 | None:intergenic | 25.0% |
| ! | AGATTCACACAAAATTCTAA+TGG | - | chr6.4:39301737-39301756 | None:intergenic | 25.0% |
| ! | AGTACAATAGAAATATCTAG+AGG | - | chr6.4:39301292-39301311 | None:intergenic | 25.0% |
| ! | ATACATTGTTCTGCAAAATA+CGG | - | chr6.4:39300186-39300205 | None:intergenic | 25.0% |
| ! | ATCTAACAAATAAACAGGTA+AGG | - | chr6.4:39301764-39301783 | None:intergenic | 25.0% |
| ! | ATTAGTTAATGTGATGCTAA+TGG | - | chr6.4:39302051-39302070 | None:intergenic | 25.0% |
| ! | ATTATACAATGGACCATTTA+CGG | + | chr6.4:39302323-39302342 | MS.gene30792:intron | 25.0% |
| ! | CATTAGAATCCTTAAAGAAA+AGG | - | chr6.4:39299899-39299918 | None:intergenic | 25.0% |
| ! | GAATTCTGTAGAGTAAAAAA+TGG | - | chr6.4:39299938-39299957 | None:intergenic | 25.0% |
| ! | GAGAAATAGAAAGGTAAATA+AGG | + | chr6.4:39299054-39299073 | MS.gene30792:intron | 25.0% |
| ! | GATTATTGGCAATTATACAA+TGG | + | chr6.4:39302312-39302331 | MS.gene30792:intron | 25.0% |
| ! | GTAGAGTAAAAAATGGTAAA+CGG | - | chr6.4:39299931-39299950 | None:intergenic | 25.0% |
| ! | GTATGATATTCAGATGTTAA+TGG | + | chr6.4:39302827-39302846 | MS.gene30792:intron | 25.0% |
| ! | TAAAAATCCTTCAATTCAGT+AGG | - | chr6.4:39300268-39300287 | None:intergenic | 25.0% |
| ! | TCGAAAGAAAAAAAAAACAG+AGG | - | chr6.4:39299216-39299235 | None:intergenic | 25.0% |
| ! | TCGCTATAATTCTGATAATT+TGG | - | chr6.4:39300037-39300056 | None:intergenic | 25.0% |
| ! | TCTGTATCTAACAAATAAAC+AGG | - | chr6.4:39301769-39301788 | None:intergenic | 25.0% |
| ! | TTGAAACTGATGAAATACTT+AGG | + | chr6.4:39302476-39302495 | MS.gene30792:intron | 25.0% |
| !! | AAGAAGAGAAATAGTATTGA+AGG | - | chr6.4:39299254-39299273 | None:intergenic | 25.0% |
| !! | ATGCACTATAGTGTATTTTA+AGG | + | chr6.4:39300547-39300566 | MS.gene30792:CDS | 25.0% |
| !! | ATTTGATAGCATCTTGTTAT+TGG | + | chr6.4:39300395-39300414 | MS.gene30792:intron | 25.0% |
| !! | GAATCATCTTCTAAAAACAA+AGG | + | chr6.4:39301665-39301684 | MS.gene30792:CDS | 25.0% |
| !! | TCTTGATCATATATTGCTTT+TGG | + | chr6.4:39300933-39300952 | MS.gene30792:intron | 25.0% |
| !! | TGAAGGATTTTTATGATTGA+AGG | + | chr6.4:39300275-39300294 | MS.gene30792:intron | 25.0% |
| !!! | ACTATAGTGTATTTTAAGGA+AGG | + | chr6.4:39300551-39300570 | MS.gene30792:CDS | 25.0% |
| !!! | CAATTTTGATAATGTTCTGA+AGG | + | chr6.4:39299834-39299853 | MS.gene30792:CDS | 25.0% |
| !!! | CTATAGTGTATTTTAAGGAA+GGG | + | chr6.4:39300552-39300571 | MS.gene30792:CDS | 25.0% |
| !!! | TCTTTTGAAGAAATATCAGA+TGG | - | chr6.4:39302189-39302208 | None:intergenic | 25.0% |
| !!! | TTAATTTGTGCTTAGTTTTG+TGG | + | chr6.4:39298926-39298945 | MS.gene30792:intron | 25.0% |
| AAATATACGATCAGAGTGAT+GGG | - | chr6.4:39301081-39301100 | None:intergenic | 30.0% | |
| AATAAAAATATGAGGAGACG+GGG | - | chr6.4:39302078-39302097 | None:intergenic | 30.0% | |
| AGAAAGGACATATTATTGTG+CGG | - | chr6.4:39300837-39300856 | None:intergenic | 30.0% | |
| ATGGAATCAAAGTAAAACTG+AGG | - | chr6.4:39301428-39301447 | None:intergenic | 30.0% | |
| ATGTTTATTTGTAGAAGGTG+TGG | + | chr6.4:39300130-39300149 | MS.gene30792:intron | 30.0% | |
| CAGAAAACTATTCAACGTTT+GGG | + | chr6.4:39299616-39299635 | MS.gene30792:intron | 30.0% | |
| CTGTCTATTAAAAGGAAAGT+TGG | + | chr6.4:39300216-39300235 | MS.gene30792:intron | 30.0% | |
| GCATTACGGATCTTTAATAT+GGG | + | chr6.4:39301338-39301357 | MS.gene30792:intron | 30.0% | |
| GTATCACTTGATATTGTCTT+AGG | + | chr6.4:39300643-39300662 | MS.gene30792:intron | 30.0% | |
| TAAAACTTGACTCTTTACTC+AGG | + | chr6.4:39301604-39301623 | MS.gene30792:intron | 30.0% | |
| TAGAGGTAGGAATTTAGTAT+AGG | + | chr6.4:39299568-39299587 | MS.gene30792:intron | 30.0% | |
| TAGCGAAAAGCTACAAAATT+TGG | + | chr6.4:39300051-39300070 | MS.gene30792:CDS | 30.0% | |
| TCAGAAAACTATTCAACGTT+TGG | + | chr6.4:39299615-39299634 | MS.gene30792:intron | 30.0% | |
| TCATCAAGTGAGAAATAGAA+AGG | + | chr6.4:39299045-39299064 | MS.gene30792:intron | 30.0% | |
| TCATTATTTGTTTGCATTGC+AGG | + | chr6.4:39300992-39301011 | MS.gene30792:intron | 30.0% | |
| TGACAATTCAAAGCTTATCA+TGG | - | chr6.4:39302596-39302615 | None:intergenic | 30.0% | |
| TGCATTACGGATCTTTAATA+TGG | + | chr6.4:39301337-39301356 | MS.gene30792:intron | 30.0% | |
| TGGCATTTAATCTTAAGGTT+GGG | + | chr6.4:39300071-39300090 | MS.gene30792:intron | 30.0% | |
| TTACCGAAGTAATCATTACA+GGG | - | chr6.4:39301514-39301533 | None:intergenic | 30.0% | |
| TTATACAATGGACCATTTAC+GGG | + | chr6.4:39302324-39302343 | MS.gene30792:intron | 30.0% | |
| TTCACTAATATGTCATAGTG+AGG | - | chr6.4:39299697-39299716 | None:intergenic | 30.0% | |
| TTGGCATTTAATCTTAAGGT+TGG | + | chr6.4:39300070-39300089 | MS.gene30792:intron | 30.0% | |
| TTGTATTTGAACTACACTTG+AGG | + | chr6.4:39301945-39301964 | MS.gene30792:intron | 30.0% | |
| TTGTTACGCTGTCTATTAAA+AGG | + | chr6.4:39300208-39300227 | MS.gene30792:intron | 30.0% | |
| TTTCATGTATGTTAATCAGG+TGG | - | chr6.4:39302768-39302787 | None:intergenic | 30.0% | |
| TTTGTTAATAGACAACGAGA+TGG | - | chr6.4:39299097-39299116 | None:intergenic | 30.0% | |
| ! | ACGTGTTTTCCTTTTCTTTA+AGG | + | chr6.4:39299887-39299906 | MS.gene30792:intron | 30.0% |
| ! | AGAATTCGAAGTCTTTTGTT+TGG | + | chr6.4:39299951-39299970 | MS.gene30792:intron | 30.0% |
| ! | AGAGAAGATTCTTTTTGCAT+GGG | - | chr6.4:39302989-39303008 | None:intergenic | 30.0% |
| ! | AGATGAACAAAGTGTTAATG+AGG | + | chr6.4:39302206-39302225 | MS.gene30792:CDS | 30.0% |
| ! | ATCTCTTTCTTCTTGTTTCT+TGG | + | chr6.4:39300687-39300706 | MS.gene30792:intron | 30.0% |
| ! | ATCTTCTAAAAACAAAGGCA+TGG | + | chr6.4:39301670-39301689 | MS.gene30792:intron | 30.0% |
| ! | ATTGAAAGGGTAGAGTTTTT+GGG | + | chr6.4:39299531-39299550 | MS.gene30792:CDS | 30.0% |
| ! | GTCATACTCAACATTTTTGA+AGG | - | chr6.4:39300244-39300263 | None:intergenic | 30.0% |
| ! | GTTTTATATGCTCTGCATTA+CGG | + | chr6.4:39301324-39301343 | MS.gene30792:intron | 30.0% |
| ! | TAGAGAAGATTCTTTTTGCA+TGG | - | chr6.4:39302990-39303009 | None:intergenic | 30.0% |
| ! | TCTTAATTATTTCTTCTGCG+TGG | + | chr6.4:39301708-39301727 | MS.gene30792:intron | 30.0% |
| ! | TTCTATTTCTCACTTGATGA+GGG | - | chr6.4:39299045-39299064 | None:intergenic | 30.0% |
| ! | TTTCTATTTCTCACTTGATG+AGG | - | chr6.4:39299046-39299065 | None:intergenic | 30.0% |
| !! | ATAAGCTTTGAATTGTCAGA+TGG | + | chr6.4:39302598-39302617 | MS.gene30792:CDS | 30.0% |
| !! | GTATTTTAAGGAAGGGTAAT+GGG | + | chr6.4:39300559-39300578 | MS.gene30792:intron | 30.0% |
| !! | TATGAACTATTTTTCCTACC+AGG | + | chr6.4:39298959-39298978 | MS.gene30792:intron | 30.0% |
| !! | TGTATTTTAAGGAAGGGTAA+TGG | + | chr6.4:39300558-39300577 | MS.gene30792:intron | 30.0% |
| AAAGCTTATCATGGATGAAG+AGG | - | chr6.4:39302587-39302606 | None:intergenic | 35.0% | |
| AAAGGCCTGCAAAATATGAT+GGG | - | chr6.4:39301210-39301229 | None:intergenic | 35.0% | |
| AACACGTAACGTTATCAGAA+TGG | - | chr6.4:39299874-39299893 | None:intergenic | 35.0% | |
| AAGAAATATCAGATGGAACC+TGG | - | chr6.4:39302182-39302201 | None:intergenic | 35.0% | |
| AAGCTTATCATGGATGAAGA+GGG | - | chr6.4:39302586-39302605 | None:intergenic | 35.0% | |
| AATATACGATCAGAGTGATG+GGG | - | chr6.4:39301080-39301099 | None:intergenic | 35.0% | |
| ACATAATGGTTGAGGTGATT+GGG | + | chr6.4:39299454-39299473 | MS.gene30792:CDS | 35.0% | |
| AGAAATATCAGATGGAACCT+GGG | - | chr6.4:39302181-39302200 | None:intergenic | 35.0% | |
| ATAAAAATATGAGGAGACGG+GGG | - | chr6.4:39302077-39302096 | None:intergenic | 35.0% | |
| ATATTCCACTACAGCATAAC+AGG | - | chr6.4:39300794-39300813 | None:intergenic | 35.0% | |
| CAAAAACTCTACCCTTTCAA+TGG | - | chr6.4:39299532-39299551 | None:intergenic | 35.0% | |
| CAAATATACGATCAGAGTGA+TGG | - | chr6.4:39301082-39301101 | None:intergenic | 35.0% | |
| CAAGTGATACTTGTTTCATG+AGG | - | chr6.4:39300633-39300652 | None:intergenic | 35.0% | |
| CACGACCAAAAAAATGTATG+TGG | - | chr6.4:39302371-39302390 | None:intergenic | 35.0% | |
| CAGATACATAGCAATACTAC+TGG | - | chr6.4:39302916-39302935 | None:intergenic | 35.0% | |
| CAGTACTGTAGATGCTATTA+AGG | + | chr6.4:39301801-39301820 | MS.gene30792:CDS | 35.0% | |
| CCAAACATACTTATCTTCGA+CGG | + | chr6.4:39300468-39300487 | MS.gene30792:CDS | 35.0% | |
| CGAAGATAAGTATGTTTGGA+TGG | - | chr6.4:39300467-39300486 | None:intergenic | 35.0% | |
| CTGTAATGATTACTTCGGTA+AGG | + | chr6.4:39301513-39301532 | MS.gene30792:intron | 35.0% | |
| CTTACCGAAGTAATCATTAC+AGG | - | chr6.4:39301515-39301534 | None:intergenic | 35.0% | |
| GATGTTAATGGAAGCAGTAA+TGG | + | chr6.4:39302839-39302858 | MS.gene30792:intron | 35.0% | |
| GCATTTAATCTTAAGGTTGG+GGG | + | chr6.4:39300073-39300092 | MS.gene30792:intron | 35.0% | |
| GGCATTTAATCTTAAGGTTG+GGG | + | chr6.4:39300072-39300091 | MS.gene30792:intron | 35.0% | |
| GTAGTAGGTTAAACTAGAAG+TGG | - | chr6.4:39302410-39302429 | None:intergenic | 35.0% | |
| GTGAAATTTGATGCACTATC+TGG | + | chr6.4:39299712-39299731 | MS.gene30792:intron | 35.0% | |
| TAAAGGCCTGCAAAATATGA+TGG | - | chr6.4:39301211-39301230 | None:intergenic | 35.0% | |
| TAAGCTCAATCACCACATAA+TGG | + | chr6.4:39299440-39299459 | MS.gene30792:CDS | 35.0% | |
| TATGACACCTACTGAATTGA+AGG | + | chr6.4:39300258-39300277 | MS.gene30792:intron | 35.0% | |
| TATGTATGTGTGTCTTTCTG+AGG | - | chr6.4:39299136-39299155 | None:intergenic | 35.0% | |
| TCACTCTGATCGTATATTTG+AGG | + | chr6.4:39301082-39301101 | MS.gene30792:CDS | 35.0% | |
| TGACCCTGTAATGATTACTT+CGG | + | chr6.4:39301508-39301527 | MS.gene30792:intron | 35.0% | |
| TGCTATGAAGACCATTGAAA+GGG | + | chr6.4:39299518-39299537 | MS.gene30792:CDS | 35.0% | |
| TGTCAACTTCTTGTTCTGTT+GGG | + | chr6.4:39301172-39301191 | MS.gene30792:intron | 35.0% | |
| TGTGAGTCATCTTTATCTGA+TGG | - | chr6.4:39302944-39302963 | None:intergenic | 35.0% | |
| TTAAGGAAGTCAGTTCCAAA+CGG | + | chr6.4:39301818-39301837 | MS.gene30792:CDS | 35.0% | |
| TTGTCAACTTCTTGTTCTGT+TGG | + | chr6.4:39301171-39301190 | MS.gene30792:intron | 35.0% | |
| ! | ATACTGATTGTCATCCAACA+CGG | - | chr6.4:39302650-39302669 | None:intergenic | 35.0% |
| ! | CATTGAAAGGGTAGAGTTTT+TGG | + | chr6.4:39299530-39299549 | MS.gene30792:CDS | 35.0% |
| ! | GAGAATCTAGTTCATGTATG+TGG | - | chr6.4:39302508-39302527 | None:intergenic | 35.0% |
| ! | TCGTATATTTGAGGCTTACA+TGG | + | chr6.4:39301091-39301110 | MS.gene30792:CDS | 35.0% |
| ! | TTTATTGCATGACTTTTCCC+AGG | + | chr6.4:39302161-39302180 | MS.gene30792:intron | 35.0% |
| !! | ATTTTGAAGGCATGCTCTAA+AGG | - | chr6.4:39301228-39301247 | None:intergenic | 35.0% |
| !!! | ATACATTTTTTTGGTCGTGG+TGG | + | chr6.4:39302372-39302391 | MS.gene30792:intron | 35.0% |
| !!! | CACATACATTTTTTTGGTCG+TGG | + | chr6.4:39302369-39302388 | MS.gene30792:intron | 35.0% |
| !!! | GTGCTTAGTTTTGTGGATTT+TGG | + | chr6.4:39298933-39298952 | MS.gene30792:intron | 35.0% |
| !!! | TTGCGCCACATACATTTTTT+TGG | + | chr6.4:39302363-39302382 | MS.gene30792:intron | 35.0% |
| AAGGCCTGCAAAATATGATG+GGG | - | chr6.4:39301209-39301228 | None:intergenic | 40.0% | |
| AATGAACTTCACCCTATCAG+TGG | + | chr6.4:39299369-39299388 | MS.gene30792:intron | 40.0% | |
| ACGAGATGGTGAAGTAAAAC+TGG | - | chr6.4:39299083-39299102 | None:intergenic | 40.0% | |
| ACTATCTGGAGATACTTGTC+GGG | + | chr6.4:39299726-39299745 | MS.gene30792:intron | 40.0% | |
| ACTGATAGGGTGAAGTTCAT+TGG | - | chr6.4:39299370-39299389 | None:intergenic | 40.0% | |
| AGATGACTCACATTCTTCAC+AGG | + | chr6.4:39302952-39302971 | MS.gene30792:CDS | 40.0% | |
| AGCATGCAGAAACAAGACAA+AGG | + | chr6.4:39299805-39299824 | MS.gene30792:intron | 40.0% | |
| CAATCACCACATAATGGTTG+AGG | + | chr6.4:39299446-39299465 | MS.gene30792:CDS | 40.0% | |
| CAATCACCTCAACCATTATG+TGG | - | chr6.4:39299455-39299474 | None:intergenic | 40.0% | |
| CACATAATGGTTGAGGTGAT+TGG | + | chr6.4:39299453-39299472 | MS.gene30792:CDS | 40.0% | |
| CACTATCTGGAGATACTTGT+CGG | + | chr6.4:39299725-39299744 | MS.gene30792:intron | 40.0% | |
| CCGTCGAAGATAAGTATGTT+TGG | - | chr6.4:39300471-39300490 | None:intergenic | 40.0% | |
| CTCTAGTAAGACCACTGATA+GGG | - | chr6.4:39299383-39299402 | None:intergenic | 40.0% | |
| CTGATAGGGTGAAGTTCATT+GGG | - | chr6.4:39299369-39299388 | None:intergenic | 40.0% | |
| CTGCTATGAAGACCATTGAA+AGG | + | chr6.4:39299517-39299536 | MS.gene30792:CDS | 40.0% | |
| GAATTACATTCTTCAAGCCC+AGG | - | chr6.4:39302439-39302458 | None:intergenic | 40.0% | |
| GATTCGAACTAAGCAACTTG+AGG | - | chr6.4:39302004-39302023 | None:intergenic | 40.0% | |
| GCAGGTAGCAAAATCTTGTT+TGG | + | chr6.4:39301010-39301029 | MS.gene30792:intron | 40.0% | |
| GCATGCAGAAACAAGACAAA+GGG | + | chr6.4:39299806-39299825 | MS.gene30792:intron | 40.0% | |
| GGACATATTATTGTGCGGAA+AGG | - | chr6.4:39300832-39300851 | None:intergenic | 40.0% | |
| GTTGGATGACAATCAGTATG+TGG | + | chr6.4:39302651-39302670 | MS.gene30792:CDS | 40.0% | |
| TACATAGCAATACTACTGGC+TGG | - | chr6.4:39302912-39302931 | None:intergenic | 40.0% | |
| TACTTGTCGGGACAAACATT+TGG | + | chr6.4:39299738-39299757 | MS.gene30792:intron | 40.0% | |
| TATCAACTTGAAGACCTTGC+AGG | + | chr6.4:39302676-39302695 | MS.gene30792:CDS | 40.0% | |
| TCAAAGTAAAACTGAGGACG+TGG | - | chr6.4:39301422-39301441 | None:intergenic | 40.0% | |
| TCTACAGTACTGCTAGTTGA+TGG | - | chr6.4:39301793-39301812 | None:intergenic | 40.0% | |
| TGTTCAAGCTGTAGTTGCTT+TGG | + | chr6.4:39299985-39300004 | MS.gene30792:CDS | 40.0% | |
| TTATCATGGATGAAGAGGGT+GGG | - | chr6.4:39302582-39302601 | None:intergenic | 40.0% | |
| TTCTGATGAGCAATGATGTC+TGG | - | chr6.4:39299649-39299668 | None:intergenic | 40.0% | |
| TTGTCAGATGGTCATCCTTA+TGG | + | chr6.4:39302610-39302629 | MS.gene30792:CDS | 40.0% | |
| ! | AAGTCCCCATCATATTTTGC+AGG | + | chr6.4:39301202-39301221 | MS.gene30792:intron | 40.0% |
| ! | GTTTGGTTCCAGCTCTATTA+GGG | + | chr6.4:39301027-39301046 | MS.gene30792:CDS | 40.0% |
| ! | TGCATGATTTTCTTGCAAGC+AGG | + | chr6.4:39302534-39302553 | MS.gene30792:intron | 40.0% |
| ! | TGTTTGGTTCCAGCTCTATT+AGG | + | chr6.4:39301026-39301045 | MS.gene30792:CDS | 40.0% |
| ACAGCTTGAACAGCAACATC+TGG | - | chr6.4:39299977-39299996 | None:intergenic | 45.0% | |
| ATGCCTATGTGTGAGGTTCT+GGG | - | chr6.4:39300771-39300790 | None:intergenic | 45.0% | |
| ATGGGTTTCTGTGCTTTGCA+GGG | + | chr6.4:39301356-39301375 | MS.gene30792:intron | 45.0% | |
| ATTCTTCAAGCCCAGGTACT+GGG | - | chr6.4:39302432-39302451 | None:intergenic | 45.0% | |
| CAGTCTATCGCAGTACTTGA+GGG | + | chr6.4:39300711-39300730 | MS.gene30792:intron | 45.0% | |
| CATCTGCTGGACAATGAGAA+AGG | - | chr6.4:39300853-39300872 | None:intergenic | 45.0% | |
| CCTCTAGTAAGACCACTGAT+AGG | - | chr6.4:39299384-39299403 | None:intergenic | 45.0% | |
| CTCAAGGTGGTTGGATTTCA+TGG | + | chr6.4:39299413-39299432 | MS.gene30792:CDS | 45.0% | |
| CTTATCATGGATGAAGAGGG+TGG | - | chr6.4:39302583-39302602 | None:intergenic | 45.0% | |
| GACTCTTTACTCAGGATGCA+TGG | + | chr6.4:39301612-39301631 | MS.gene30792:intron | 45.0% | |
| GCCGTCGAAGATAAAGAACA+CGG | - | chr6.4:39300499-39300518 | None:intergenic | 45.0% | |
| GCCGTGTTCTTTATCTTCGA+CGG | + | chr6.4:39300495-39300514 | MS.gene30792:CDS | 45.0% | |
| GGCGCAAAATAGAAATGCAG+TGG | - | chr6.4:39302350-39302369 | None:intergenic | 45.0% | |
| TAACAGGATGCCTATGTGTG+AGG | - | chr6.4:39300778-39300797 | None:intergenic | 45.0% | |
| TAACCTACTACCCAGTACCT+GGG | + | chr6.4:39302419-39302438 | MS.gene30792:intron | 45.0% | |
| TATCATGGATGAAGAGGGTG+GGG | - | chr6.4:39302581-39302600 | None:intergenic | 45.0% | |
| TATGGGTTTCTGTGCTTTGC+AGG | + | chr6.4:39301355-39301374 | MS.gene30792:intron | 45.0% | |
| TGATTGTCATCCAACACGGT+GGG | - | chr6.4:39302646-39302665 | None:intergenic | 45.0% | |
| TGGAGATCTGTGCACGAATT+AGG | + | chr6.4:39301632-39301651 | MS.gene30792:CDS | 45.0% | |
| TGTGCAACCATTGTCGAACA+CGG | - | chr6.4:39300526-39300545 | None:intergenic | 45.0% | |
| TTAACCTACTACCCAGTACC+TGG | + | chr6.4:39302418-39302437 | MS.gene30792:intron | 45.0% | |
| TTCCAGGATTACGAGAGATC+TGG | - | chr6.4:39300587-39300606 | None:intergenic | 45.0% | |
| TTCTGCTTTGCATCATCTGC+TGG | - | chr6.4:39300866-39300885 | None:intergenic | 45.0% | |
| TTGCTTAGTTCGAATCCCCT+CGG | + | chr6.4:39302008-39302027 | MS.gene30792:intron | 45.0% | |
| ! | AGCAGTAATGGAGTCACTGA+AGG | + | chr6.4:39302851-39302870 | MS.gene30792:CDS | 45.0% |
| ! | ATTTTACAACCACTCCCGAG+GGG | - | chr6.4:39302026-39302045 | None:intergenic | 45.0% |
| ! | CATTTTACAACCACTCCCGA+GGG | - | chr6.4:39302027-39302046 | None:intergenic | 45.0% |
| ! | CCTATCAGTGGTCTTACTAG+AGG | + | chr6.4:39299381-39299400 | MS.gene30792:intron | 45.0% |
| ! | CCTGGAAGTACAAAATCCGA+AGG | + | chr6.4:39302875-39302894 | MS.gene30792:CDS | 45.0% |
| ! | CCTTCGGATTTTGTACTTCC+AGG | - | chr6.4:39302878-39302897 | None:intergenic | 45.0% |
| ! | TCATTTTACAACCACTCCCG+AGG | - | chr6.4:39302028-39302047 | None:intergenic | 45.0% |
| !!! | AGGGTAGAGTTTTTGGGACT+TGG | + | chr6.4:39299537-39299556 | MS.gene30792:CDS | 45.0% |
| !!! | GGGTAGAGTTTTTGGGACTT+GGG | + | chr6.4:39299538-39299557 | MS.gene30792:CDS | 45.0% |
| !!! | GGTAGAGTTTTTGGGACTTG+GGG | + | chr6.4:39299539-39299558 | MS.gene30792:CDS | 45.0% |
| !!! | GTAGAGTTTTTGGGACTTGG+GGG | + | chr6.4:39299540-39299559 | MS.gene30792:CDS | 45.0% |
| !!! | TTTTTTTGGTCGTGGTGGTC+TGG | + | chr6.4:39302377-39302396 | MS.gene30792:intron | 45.0% |
| !! | AAAATATTGAAAAATTATAA+AGG | - | chr6.4:39300426-39300445 | None:intergenic | 5.0% |
| !!! | TAAATTTTCAATTAAAAAAA+AGG | - | chr6.4:39302247-39302266 | None:intergenic | 5.0% |
| AATGGAGTCACTGAAGGACC+TGG | + | chr6.4:39302857-39302876 | MS.gene30792:CDS | 50.0% | |
| AGATGTTGCTCGAACGTCCA+GGG | - | chr6.4:39298992-39299011 | None:intergenic | 50.0% | |
| ATCCAACACGGTGGGTACAT+GGG | - | chr6.4:39302638-39302657 | None:intergenic | 50.0% | |
| ATGGCATGCCCTAATAGAGC+TGG | - | chr6.4:39301038-39301057 | None:intergenic | 50.0% | |
| CAAACCTCCATCCTGCTCAT+TGG | - | chr6.4:39301844-39301863 | None:intergenic | 50.0% | |
| CAATGTTCTGCAACCTCCTG+AGG | + | chr6.4:39301463-39301482 | MS.gene30792:CDS | 50.0% | |
| CACTGGATGGAAAACCTGCA+AGG | - | chr6.4:39302693-39302712 | None:intergenic | 50.0% | |
| CATTCTTCAAGCCCAGGTAC+TGG | - | chr6.4:39302433-39302452 | None:intergenic | 50.0% | |
| CCAGCTGGTTGGATTTCACA+GGG | - | chr6.4:39299486-39299505 | None:intergenic | 50.0% | |
| CCAGTCTATCGCAGTACTTG+AGG | + | chr6.4:39300710-39300729 | MS.gene30792:intron | 50.0% | |
| CTCCAGATCTCTCGTAATCC+TGG | + | chr6.4:39300582-39300601 | MS.gene30792:intron | 50.0% | |
| CTGATTGTCATCCAACACGG+TGG | - | chr6.4:39302647-39302666 | None:intergenic | 50.0% | |
| GAAATCCAACCACCTTGAGC+TGG | - | chr6.4:39299412-39299431 | None:intergenic | 50.0% | |
| GAAATCCAACCAGCTGGAGT+TGG | + | chr6.4:39299489-39299508 | MS.gene30792:CDS | 50.0% | |
| GAAATGCAGTGGCCCGTAAA+TGG | - | chr6.4:39302339-39302358 | None:intergenic | 50.0% | |
| GATGCCTATGTGTGAGGTTC+TGG | - | chr6.4:39300772-39300791 | None:intergenic | 50.0% | |
| GATTCACCAACCTCATCCTC+AGG | - | chr6.4:39301482-39301501 | None:intergenic | 50.0% | |
| GGCATCCTGTTATGCTGTAG+TGG | + | chr6.4:39300786-39300805 | MS.gene30792:intron | 50.0% | |
| GGTGAAGTTCATTGGGTCGT+AGG | - | chr6.4:39299362-39299381 | None:intergenic | 50.0% | |
| GTAATCCTGGAAGAGCAGAG+AGG | + | chr6.4:39300595-39300614 | MS.gene30792:intron | 50.0% | |
| TCATTGGGTCGTAGGTGTAG+CGG | - | chr6.4:39299354-39299373 | None:intergenic | 50.0% | |
| TCCAGCTGGTTGGATTTCAC+AGG | - | chr6.4:39299487-39299506 | None:intergenic | 50.0% | |
| TCTTTCTTCCTCCTCTGCAC+TGG | - | chr6.4:39302710-39302729 | None:intergenic | 50.0% | |
| TGCCTATGTGTGAGGTTCTG+GGG | - | chr6.4:39300770-39300789 | None:intergenic | 50.0% | |
| TGCTTAGTTCGAATCCCCTC+GGG | + | chr6.4:39302009-39302028 | MS.gene30792:intron | 50.0% | |
| TGGACGTTCGAGCAACATCT+CGG | + | chr6.4:39298992-39299011 | MS.gene30792:CDS | 50.0% | |
| ! | AGGTTTTCCATCCAGTGCAG+AGG | + | chr6.4:39302696-39302715 | MS.gene30792:CDS | 50.0% |
| ! | CACTTGAGGTGCTAGCTAAG+TGG | + | chr6.4:39301959-39301978 | MS.gene30792:intron | 50.0% |
| ! | CCTCAAGTACTGCGATAGAC+TGG | - | chr6.4:39300713-39300732 | None:intergenic | 50.0% |
| ! | TTTTCCATCCAGTGCAGAGG+AGG | + | chr6.4:39302699-39302718 | MS.gene30792:CDS | 50.0% |
| !! | ACTTGATGAGGGCATTCTGC+AGG | - | chr6.4:39299034-39299053 | None:intergenic | 50.0% |
| AACGTCCAGGGTTCAACACC+TGG | - | chr6.4:39298980-39298999 | None:intergenic | 55.0% | |
| ATCCAACCACCTTGAGCTGG+CGG | - | chr6.4:39299409-39299428 | None:intergenic | 55.0% | |
| ATCCAACCAGCTGGAGTTGG+AGG | + | chr6.4:39299492-39299511 | MS.gene30792:CDS | 55.0% | |
| CAAACGGCCAATGAGCAGGA+TGG | + | chr6.4:39301834-39301853 | MS.gene30792:CDS | 55.0% | |
| CAACCTCCTGAGGATGAGGT+TGG | + | chr6.4:39301473-39301492 | MS.gene30792:intron | 55.0% | |
| CATCCAACACGGTGGGTACA+TGG | - | chr6.4:39302639-39302658 | None:intergenic | 55.0% | |
| CATCCTGCTCATTGGCCGTT+TGG | - | chr6.4:39301836-39301855 | None:intergenic | 55.0% | |
| CCCTGTGAAATCCAACCAGC+TGG | + | chr6.4:39299483-39299502 | MS.gene30792:CDS | 55.0% | |
| GACGTTCGAGCAACATCTCG+GGG | + | chr6.4:39298994-39299013 | MS.gene30792:CDS | 55.0% | |
| GAGATGTTGCTCGAACGTCC+AGG | - | chr6.4:39298993-39299012 | None:intergenic | 55.0% | |
| GGACGTTCGAGCAACATCTC+GGG | + | chr6.4:39298993-39299012 | MS.gene30792:CDS | 55.0% | |
| GTGGGTACATGGGGACCATA+AGG | - | chr6.4:39302628-39302647 | None:intergenic | 55.0% | |
| GTTCCAAACGGCCAATGAGC+AGG | + | chr6.4:39301830-39301849 | MS.gene30792:CDS | 55.0% | |
| TCACCAACCTCATCCTCAGG+AGG | - | chr6.4:39301479-39301498 | None:intergenic | 55.0% | |
| TCCAACACGGTGGGTACATG+GGG | - | chr6.4:39302637-39302656 | None:intergenic | 55.0% | |
| TCCAACCAGCTGGAGTTGGA+GGG | + | chr6.4:39299493-39299512 | MS.gene30792:CDS | 55.0% | |
| TCCAGGGTTCAACACCTGGT+AGG | - | chr6.4:39298976-39298995 | None:intergenic | 55.0% | |
| TCTCTCCTCTCTGCTCTTCC+AGG | - | chr6.4:39300603-39300622 | None:intergenic | 55.0% | |
| TCTGCAACCTCCTGAGGATG+AGG | + | chr6.4:39301469-39301488 | MS.gene30792:CDS | 55.0% | |
| TCTTCCTCCTCTGCACTGGA+TGG | - | chr6.4:39302706-39302725 | None:intergenic | 55.0% | |
| TGCCCCAGAACCTCACACAT+AGG | + | chr6.4:39300765-39300784 | MS.gene30792:intron | 55.0% | |
| ! | CTTGGGGGCGTAATAGAGGT+AGG | + | chr6.4:39299555-39299574 | MS.gene30792:intron | 55.0% |
| ! | TTTTGGTCGTGGTGGTCTGG+TGG | + | chr6.4:39302380-39302399 | MS.gene30792:intron | 55.0% |
| !! | AAGCCCAGGTACTGGGTAGT+AGG | - | chr6.4:39302425-39302444 | None:intergenic | 55.0% |
| !! | TCCTACCAGGTGTTGAACCC+TGG | + | chr6.4:39298972-39298991 | MS.gene30792:intron | 55.0% |
| ACGGCCAATGAGCAGGATGG+AGG | + | chr6.4:39301837-39301856 | MS.gene30792:CDS | 60.0% | |
| AGTTCGAATCCCCTCGGGAG+TGG | + | chr6.4:39302014-39302033 | MS.gene30792:intron | 60.0% | |
| CCAACCAGCTGGAGTTGGAG+GGG | + | chr6.4:39299494-39299513 | MS.gene30792:CDS | 60.0% | |
| GGCACAGCCGTGTTCGACAA+TGG | + | chr6.4:39300516-39300535 | MS.gene30792:CDS | 60.0% | |
| TCCAACCACCTTGAGCTGGC+GGG | - | chr6.4:39299408-39299427 | None:intergenic | 60.0% | |
| TCCCCATGTACCCACCGTGT+TGG | + | chr6.4:39302633-39302652 | MS.gene30792:CDS | 60.0% | |
| TGCCAACCTCCCTGCCCAAA+GGG | + | chr6.4:39300736-39300755 | MS.gene30792:intron | 60.0% | |
| TTGGGTCGTAGGTGTAGCGG+AGG | - | chr6.4:39299351-39299370 | None:intergenic | 60.0% | |
| ! | GGGACTTGGGGGCGTAATAG+AGG | + | chr6.4:39299551-39299570 | MS.gene30792:CDS | 60.0% |
| ! | GTCGTAGGTGTAGCGGAGGT+AGG | - | chr6.4:39299347-39299366 | None:intergenic | 60.0% |
| !! | TGTGTGAGGTTCTGGGGCAG+CGG | - | chr6.4:39300764-39300783 | None:intergenic | 60.0% |
| CCAACCACCTTGAGCTGGCG+GGG | - | chr6.4:39299407-39299426 | None:intergenic | 65.0% | |
| CCCCTCCAACTCCAGCTGGT+TGG | - | chr6.4:39299497-39299516 | None:intergenic | 65.0% | |
| CTGCCAACCTCCCTGCCCAA+AGG | + | chr6.4:39300735-39300754 | MS.gene30792:intron | 65.0% | |
| !! | GTGTGAGGTTCTGGGGCAGC+GGG | - | chr6.4:39300763-39300782 | None:intergenic | 65.0% |
| !! | TGTGAGGTTCTGGGGCAGCG+GGG | - | chr6.4:39300762-39300781 | None:intergenic | 65.0% |
| CCCCGCCAGCTCAAGGTGGT+TGG | + | chr6.4:39299404-39299423 | MS.gene30792:CDS | 70.0% | |
| CTAGAGGCCCCGCCAGCTCA+AGG | + | chr6.4:39299397-39299416 | MS.gene30792:CDS | 70.0% | |
| GCAGCCCCTCCAACTCCAGC+TGG | - | chr6.4:39299501-39299520 | None:intergenic | 70.0% | |
| GGCCCTTTGGGCAGGGAGGT+TGG | - | chr6.4:39300741-39300760 | None:intergenic | 70.0% | |
| CTGGGGCAGCGGGGCCCTTT+GGG | - | chr6.4:39300753-39300772 | None:intergenic | 75.0% | |
| GAGGCCCCGCCAGCTCAAGG+TGG | + | chr6.4:39299400-39299419 | MS.gene30792:CDS | 75.0% | |
| GCAGCGGGGCCCTTTGGGCA+GGG | - | chr6.4:39300748-39300767 | None:intergenic | 75.0% | |
| ! | TCTGGGGCAGCGGGGCCCTT+TGG | - | chr6.4:39300754-39300773 | None:intergenic | 75.0% |
| ! | GCGGGGCCCTTTGGGCAGGG+AGG | - | chr6.4:39300745-39300764 | None:intergenic | 80.0% |
| ! | GGCAGCGGGGCCCTTTGGGC+AGG | - | chr6.4:39300749-39300768 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 39298908 | 39303010 | 39298908 | ID=MS.gene30792 |
| chr6.4 | mRNA | 39298908 | 39303010 | 39298908 | ID=MS.gene30792.t1;Parent=MS.gene30792 |
| chr6.4 | exon | 39298908 | 39298910 | 39298908 | ID=MS.gene30792.t1.exon1;Parent=MS.gene30792.t1 |
| chr6.4 | CDS | 39298908 | 39298910 | 39298908 | ID=cds.MS.gene30792.t1;Parent=MS.gene30792.t1 |
| chr6.4 | exon | 39298981 | 39299051 | 39298981 | ID=MS.gene30792.t1.exon2;Parent=MS.gene30792.t1 |
| chr6.4 | CDS | 39298981 | 39299051 | 39298981 | ID=cds.MS.gene30792.t1;Parent=MS.gene30792.t1 |
| chr6.4 | exon | 39299389 | 39299572 | 39299389 | ID=MS.gene30792.t1.exon3;Parent=MS.gene30792.t1 |
| chr6.4 | CDS | 39299389 | 39299572 | 39299389 | ID=cds.MS.gene30792.t1;Parent=MS.gene30792.t1 |
| chr6.4 | exon | 39299814 | 39299855 | 39299814 | ID=MS.gene30792.t1.exon4;Parent=MS.gene30792.t1 |
| chr6.4 | CDS | 39299814 | 39299855 | 39299814 | ID=cds.MS.gene30792.t1;Parent=MS.gene30792.t1 |
| chr6.4 | exon | 39299953 | 39300087 | 39299953 | ID=MS.gene30792.t1.exon5;Parent=MS.gene30792.t1 |
| chr6.4 | CDS | 39299953 | 39300087 | 39299953 | ID=cds.MS.gene30792.t1;Parent=MS.gene30792.t1 |
| chr6.4 | exon | 39300458 | 39300573 | 39300458 | ID=MS.gene30792.t1.exon6;Parent=MS.gene30792.t1 |
| chr6.4 | CDS | 39300458 | 39300573 | 39300458 | ID=cds.MS.gene30792.t1;Parent=MS.gene30792.t1 |
| chr6.4 | exon | 39300714 | 39300732 | 39300714 | ID=MS.gene30792.t1.exon7;Parent=MS.gene30792.t1 |
| chr6.4 | CDS | 39300714 | 39300732 | 39300714 | ID=cds.MS.gene30792.t1;Parent=MS.gene30792.t1 |
| chr6.4 | exon | 39301014 | 39301112 | 39301014 | ID=MS.gene30792.t1.exon8;Parent=MS.gene30792.t1 |
| chr6.4 | CDS | 39301014 | 39301112 | 39301014 | ID=cds.MS.gene30792.t1;Parent=MS.gene30792.t1 |
| chr6.4 | exon | 39301377 | 39301490 | 39301377 | ID=MS.gene30792.t1.exon9;Parent=MS.gene30792.t1 |
| chr6.4 | CDS | 39301377 | 39301490 | 39301377 | ID=cds.MS.gene30792.t1;Parent=MS.gene30792.t1 |
| chr6.4 | exon | 39301626 | 39301686 | 39301626 | ID=MS.gene30792.t1.exon10;Parent=MS.gene30792.t1 |
| chr6.4 | CDS | 39301626 | 39301686 | 39301626 | ID=cds.MS.gene30792.t1;Parent=MS.gene30792.t1 |
| chr6.4 | exon | 39301782 | 39301858 | 39301782 | ID=MS.gene30792.t1.exon11;Parent=MS.gene30792.t1 |
| chr6.4 | CDS | 39301782 | 39301858 | 39301782 | ID=cds.MS.gene30792.t1;Parent=MS.gene30792.t1 |
| chr6.4 | exon | 39302183 | 39302227 | 39302183 | ID=MS.gene30792.t1.exon12;Parent=MS.gene30792.t1 |
| chr6.4 | CDS | 39302183 | 39302227 | 39302183 | ID=cds.MS.gene30792.t1;Parent=MS.gene30792.t1 |
| chr6.4 | exon | 39302556 | 39302729 | 39302556 | ID=MS.gene30792.t1.exon13;Parent=MS.gene30792.t1 |
| chr6.4 | CDS | 39302556 | 39302729 | 39302556 | ID=cds.MS.gene30792.t1;Parent=MS.gene30792.t1 |
| chr6.4 | exon | 39302840 | 39303010 | 39302840 | ID=MS.gene30792.t1.exon14;Parent=MS.gene30792.t1 |
| chr6.4 | CDS | 39302840 | 39303010 | 39302840 | ID=cds.MS.gene30792.t1;Parent=MS.gene30792.t1 |
| Gene Sequence |
| Protein sequence |
