Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33793.t1 | XP_013457042.1 | 78.2 | 133 | 9 | 1 | 1 | 113 | 1 | 133 | 1.10E-28 | 136 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33793.t1 | O65426 | 77.9 | 86 | 19 | 0 | 18 | 103 | 56 | 141 | 3.4e-10 | 65.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33793.t1 | A0A072UPT8 | 78.2 | 133 | 9 | 1 | 1 | 113 | 1 | 133 | 8.0e-29 | 136.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene33793.t1 | TF | C2C2-LSD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene33793 | -0.80504 | 1.62E-49 | -1.69E-46 |
| MS.gene049419 | MS.gene33793 | 0.843792 | 1.13E-58 | -1.69E-46 |
| MS.gene04991 | MS.gene33793 | 0.830531 | 2.79E-55 | -1.69E-46 |
| MS.gene049983 | MS.gene33793 | -0.825571 | 4.36E-54 | -1.69E-46 |
| MS.gene050105 | MS.gene33793 | -0.826333 | 2.87E-54 | -1.69E-46 |
| MS.gene050361 | MS.gene33793 | -0.807168 | 5.77E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene33793 | -0.854877 | 9.19E-62 | -1.69E-46 |
| MS.gene050737 | MS.gene33793 | -0.812644 | 3.82E-51 | -1.69E-46 |
| MS.gene050941 | MS.gene33793 | -0.834239 | 3.36E-56 | -1.69E-46 |
| MS.gene051122 | MS.gene33793 | -0.853165 | 2.86E-61 | -1.69E-46 |
| MS.gene051275 | MS.gene33793 | -0.80277 | 4.79E-49 | -1.69E-46 |
| MS.gene051541 | MS.gene33793 | -0.80472 | 1.89E-49 | -1.69E-46 |
| MS.gene05216 | MS.gene33793 | -0.801836 | 7.46E-49 | -1.69E-46 |
| MS.gene052434 | MS.gene33793 | -0.801348 | 9.40E-49 | -1.69E-46 |
| MS.gene052674 | MS.gene33793 | -0.813956 | 1.97E-51 | -1.69E-46 |
| MS.gene052675 | MS.gene33793 | -0.810998 | 8.72E-51 | -1.69E-46 |
| MS.gene052677 | MS.gene33793 | -0.813267 | 2.79E-51 | -1.69E-46 |
| MS.gene053726 | MS.gene33793 | -0.824141 | 9.48E-54 | -1.69E-46 |
| MS.gene054479 | MS.gene33793 | -0.854105 | 1.54E-61 | -1.69E-46 |
| MS.gene054893 | MS.gene33793 | -0.803128 | 4.04E-49 | -1.69E-46 |
| MS.gene055864 | MS.gene33793 | -0.815495 | 8.98E-52 | -1.69E-46 |
| MS.gene056480 | MS.gene33793 | -0.82583 | 3.79E-54 | -1.69E-46 |
| MS.gene056779 | MS.gene33793 | -0.81071 | 1.01E-50 | -1.69E-46 |
| MS.gene058081 | MS.gene33793 | -0.856397 | 3.31E-62 | -1.69E-46 |
| MS.gene058159 | MS.gene33793 | -0.80545 | 1.33E-49 | -1.69E-46 |
| MS.gene058223 | MS.gene33793 | 0.830391 | 3.01E-55 | -1.69E-46 |
| MS.gene058429 | MS.gene33793 | -0.837922 | 3.90E-57 | -1.69E-46 |
| MS.gene059952 | MS.gene33793 | -0.801444 | 8.98E-49 | -1.69E-46 |
| MS.gene06010 | MS.gene33793 | -0.813761 | 2.17E-51 | -1.69E-46 |
| MS.gene060850 | MS.gene33793 | -0.833977 | 3.91E-56 | -1.69E-46 |
| MS.gene060851 | MS.gene33793 | -0.848751 | 5.02E-60 | -1.69E-46 |
| MS.gene060852 | MS.gene33793 | -0.849662 | 2.80E-60 | -1.69E-46 |
| MS.gene060932 | MS.gene33793 | -0.858077 | 1.06E-62 | -1.69E-46 |
| MS.gene06121 | MS.gene33793 | -0.830957 | 2.19E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33793.t1 | MTR_4g088850 | 83.459 | 133 | 2 | 1 | 1 | 113 | 1 | 133 | 3.25e-74 | 216 |
| MS.gene33793.t1 | MTR_4g088850 | 78.947 | 114 | 4 | 1 | 1 | 94 | 1 | 114 | 1.07e-57 | 175 |
| MS.gene33793.t1 | MTR_4g098500 | 58.750 | 80 | 31 | 1 | 16 | 93 | 38 | 117 | 1.38e-27 | 98.2 |
| MS.gene33793.t1 | MTR_4g098500 | 58.750 | 80 | 31 | 1 | 16 | 93 | 64 | 143 | 4.28e-27 | 97.8 |
| MS.gene33793.t1 | MTR_8g089310 | 51.765 | 85 | 39 | 1 | 16 | 98 | 35 | 119 | 1.96e-25 | 94.4 |
| MS.gene33793.t1 | MTR_2g047838 | 44.086 | 93 | 50 | 1 | 17 | 107 | 39 | 131 | 1.98e-25 | 94.4 |
| MS.gene33793.t1 | MTR_8g089310 | 51.765 | 85 | 39 | 1 | 16 | 98 | 48 | 132 | 2.73e-25 | 94.4 |
| MS.gene33793.t1 | MTR_8g089310 | 51.765 | 85 | 39 | 1 | 16 | 98 | 82 | 166 | 5.36e-25 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33793.t1 | AT4G21610 | 75.581 | 86 | 21 | 0 | 18 | 103 | 56 | 141 | 3.11e-42 | 136 |
| MS.gene33793.t1 | AT4G21610 | 68.235 | 85 | 27 | 0 | 8 | 92 | 46 | 130 | 1.20e-33 | 114 |
| MS.gene33793.t1 | AT1G32540 | 57.500 | 80 | 32 | 1 | 16 | 93 | 98 | 177 | 6.04e-27 | 98.6 |
| MS.gene33793.t1 | AT1G32540 | 56.098 | 82 | 34 | 1 | 16 | 95 | 65 | 146 | 7.80e-27 | 97.4 |
| MS.gene33793.t1 | AT1G32540 | 56.098 | 82 | 34 | 1 | 16 | 95 | 65 | 146 | 7.80e-27 | 97.4 |
| MS.gene33793.t1 | AT1G32540 | 60.000 | 75 | 28 | 1 | 16 | 88 | 65 | 139 | 4.45e-25 | 92.8 |
| MS.gene33793.t1 | AT4G20380 | 44.944 | 89 | 40 | 1 | 20 | 99 | 48 | 136 | 4.61e-22 | 85.9 |
| MS.gene33793.t1 | AT4G20380 | 44.944 | 89 | 40 | 1 | 20 | 99 | 48 | 136 | 4.61e-22 | 85.9 |
| MS.gene33793.t1 | AT4G20380 | 44.944 | 89 | 40 | 1 | 20 | 99 | 43 | 131 | 4.69e-22 | 85.9 |
| MS.gene33793.t1 | AT4G20380 | 44.944 | 89 | 40 | 1 | 20 | 99 | 43 | 131 | 4.69e-22 | 85.9 |
| MS.gene33793.t1 | AT4G20380 | 44.944 | 89 | 40 | 1 | 20 | 99 | 43 | 131 | 4.69e-22 | 85.9 |
| MS.gene33793.t1 | AT4G20380 | 44.944 | 89 | 40 | 1 | 20 | 99 | 43 | 131 | 4.69e-22 | 85.9 |
| MS.gene33793.t1 | AT4G20380 | 44.944 | 89 | 40 | 1 | 20 | 99 | 43 | 131 | 4.69e-22 | 85.9 |
| MS.gene33793.t1 | AT4G20380 | 45.122 | 82 | 36 | 1 | 20 | 92 | 43 | 124 | 6.99e-20 | 79.0 |
| MS.gene33793.t1 | AT4G20380 | 39.744 | 78 | 44 | 1 | 22 | 96 | 4 | 81 | 1.66e-13 | 62.4 |
| MS.gene33793.t1 | AT4G20380 | 35.652 | 115 | 39 | 1 | 20 | 99 | 43 | 157 | 9.43e-19 | 77.8 |
| MS.gene33793.t1 | AT4G20380 | 44.776 | 67 | 34 | 1 | 22 | 85 | 4 | 70 | 2.84e-13 | 63.5 |
| MS.gene33793.t1 | AT1G32540 | 43.750 | 80 | 44 | 1 | 9 | 87 | 21 | 100 | 5.42e-13 | 60.5 |
| MS.gene33793.t1 | AT1G32540 | 43.750 | 80 | 44 | 1 | 9 | 87 | 21 | 100 | 5.42e-13 | 60.5 |
| MS.gene33793.t1 | AT1G32540 | 42.857 | 84 | 45 | 2 | 7 | 87 | 50 | 133 | 2.31e-12 | 59.7 |
Find 38 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTCGTCTTCTTTGTTTACT+TGG | 0.250828 | 4.4:+23890044 | None:intergenic |
| TGCCGGTTTGTGACAGAAAT+CGG | 0.319178 | 4.4:-23887385 | MS.gene33793:CDS |
| AGGCCGCTAACAACCAGATT+TGG | 0.328376 | 4.4:+23886847 | None:intergenic |
| GCATGAACATTTGACATGTT+TGG | 0.343047 | 4.4:+23889643 | None:intergenic |
| TTCCTTCGTCACAGCTGGTC+AGG | 0.400764 | 4.4:-23887485 | MS.gene33793:intron |
| CTTCTTTGTTTACTTGGTGT+TGG | 0.410923 | 4.4:+23890050 | None:intergenic |
| GGCCGCTAACAACCAGATTT+GGG | 0.413926 | 4.4:+23886848 | None:intergenic |
| AAACCAACTCCTCCCAAATC+TGG | 0.417656 | 4.4:-23886860 | MS.gene33793:CDS |
| GCCGGTTTGTGACAGAAATC+GGG | 0.420532 | 4.4:-23887384 | MS.gene33793:CDS |
| CTAATACAATGTTGACTGTC+TGG | 0.430906 | 4.4:+23889618 | None:intergenic |
| CATACGGTGCTCCACAAGTT+AGG | 0.437213 | 4.4:-23887417 | MS.gene33793:CDS |
| CAACCAGATTTGGGAGGAGT+TGG | 0.440236 | 4.4:+23886857 | None:intergenic |
| CCCCGATTTCTGTCACAAAC+CGG | 0.464843 | 4.4:+23887383 | None:intergenic |
| ATAGGTTGCCAACCAGGTGG+CGG | 0.493264 | 4.4:+23890016 | None:intergenic |
| ACAGTCAACATTGTATTAGA+AGG | 0.509196 | 4.4:-23889614 | MS.gene33793:intron |
| TAGGTTGCCAACCAGGTGGC+GGG | 0.511813 | 4.4:+23890017 | None:intergenic |
| CATTTGACATGTTTGGCACC+TGG | 0.517148 | 4.4:+23889650 | None:intergenic |
| CGCCTGCTTTCGTATCCACC+AGG | 0.522323 | 4.4:-23889668 | MS.gene33793:CDS |
| AAGTTAGGTGTTCATCATGC+CGG | 0.527912 | 4.4:-23887402 | MS.gene33793:CDS |
| CTAACTTGTGGAGCACCGTA+TGG | 0.535574 | 4.4:+23887418 | None:intergenic |
| CAGACAACAAGCGGCCTCCA+TGG | 0.537061 | 4.4:-23886898 | MS.gene33793:CDS |
| CACCTGGTGGATACGAAAGC+AGG | 0.543193 | 4.4:+23889666 | None:intergenic |
| CTCCCAAATCTGGTTGTTAG+CGG | 0.560296 | 4.4:-23886850 | None:intergenic |
| GACGACGACGGCCCGCCACC+TGG | 0.561082 | 4.4:-23890028 | MS.gene33793:intron |
| TTCGTCACAGCTGGTCAGGT+TGG | 0.564892 | 4.4:-23887481 | MS.gene33793:intron |
| TTGTGCAGGCAGACAACAAG+CGG | 0.571247 | 4.4:-23886907 | MS.gene33793:intron |
| TAACTTGTGGAGCACCGTAT+GGG | 0.583052 | 4.4:+23887419 | None:intergenic |
| TTACTTTGTTGTACAGACCA+TGG | 0.588700 | 4.4:+23886881 | None:intergenic |
| CAGGTTGGACAAGTTAAGTG+TGG | 0.602861 | 4.4:-23887466 | MS.gene33793:CDS |
| CATGATGAACACCTAACTTG+TGG | 0.604697 | 4.4:+23887406 | None:intergenic |
| AGGTTGGACAAGTTAAGTGT+GGG | 0.628125 | 4.4:-23887465 | MS.gene33793:CDS |
| TTGACATGTTTGGCACCTGG+TGG | 0.642814 | 4.4:+23889653 | None:intergenic |
| GTATTGCTAATGTACCCATA+CGG | 0.650598 | 4.4:-23887433 | MS.gene33793:CDS |
| CCGGTTTGTGACAGAAATCG+GGG | 0.660382 | 4.4:-23887383 | MS.gene33793:intron |
| CGCTAACAACCAGATTTGGG+AGG | 0.672253 | 4.4:+23886851 | None:intergenic |
| CTGGTGGATACGAAAGCAGG+CGG | 0.684251 | 4.4:+23889669 | None:intergenic |
| GTAAACAAAGAAGACGACGA+CGG | 0.708854 | 4.4:-23890040 | MS.gene33793:CDS |
| CTTTGTTGTACAGACCATGG+AGG | 0.723748 | 4.4:+23886884 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTAATAATATATATGTAT+AGG | + | chr4.4:23889728-23889747 | None:intergenic | 10.0% |
| !!! | TATTATTGATTTTATATTGT+TGG | - | chr4.4:23889937-23889956 | MS.gene33793:intron | 10.0% |
| !! | AAAATGTCTAATTGAAAATT+TGG | + | chr4.4:23889250-23889269 | None:intergenic | 15.0% |
| !! | ATAAAATCAATAATAGCTAT+AGG | + | chr4.4:23889932-23889951 | None:intergenic | 15.0% |
| !!! | TTTTGACTTAAAAAATTAGA+AGG | + | chr4.4:23889602-23889621 | None:intergenic | 15.0% |
| !! | ACATATTACATATTGTTCTA+AGG | - | chr4.4:23889656-23889675 | MS.gene33793:CDS | 20.0% |
| !! | AGTAACATTTCTAACAAAAA+AGG | - | chr4.4:23889141-23889160 | MS.gene33793:intron | 20.0% |
| !! | ATATTCAACATTGTATTAGA+AGG | - | chr4.4:23888916-23888935 | MS.gene33793:intron | 20.0% |
| !! | GAAAATTTCATTAACATAAC+AGG | + | chr4.4:23888850-23888869 | None:intergenic | 20.0% |
| !! | TTCATAAACAATTACATGAT+TGG | - | chr4.4:23889040-23889059 | MS.gene33793:intron | 20.0% |
| !! | TTCATATTTGAAAATTGTGT+CGG | + | chr4.4:23888352-23888371 | None:intergenic | 20.0% |
| !!! | ATAATGACCAAATATTTTCT+TGG | - | chr4.4:23888193-23888212 | MS.gene33793:intron | 20.0% |
| !!! | TTCAATTAGACATTTTAGTA+TGG | - | chr4.4:23889254-23889273 | MS.gene33793:intron | 20.0% |
| ! | AACTTAAAATGCAAGTTTCA+TGG | + | chr4.4:23888988-23889007 | None:intergenic | 25.0% |
| ! | ATCAAAAGTTGAAGATTACA+TGG | - | chr4.4:23888424-23888443 | MS.gene33793:intron | 25.0% |
| ! | CCATAAAAGGTTAAAACTAA+AGG | + | chr4.4:23887137-23887156 | None:intergenic | 25.0% |
| ! | CTTTAAATTATCCAAGTGTA+GGG | - | chr4.4:23889827-23889846 | MS.gene33793:intron | 25.0% |
| ! | GAGAAAAAAAGAGAAGTAAT+AGG | + | chr4.4:23887007-23887026 | None:intergenic | 25.0% |
| ! | TACATAAATCAACTTGCAAT+TGG | + | chr4.4:23889637-23889656 | None:intergenic | 25.0% |
| ! | TACTTGTACAAAATATGACA+TGG | - | chr4.4:23889365-23889384 | MS.gene33793:intron | 25.0% |
| ! | TCAAAAGTTGAAGATTACAT+GGG | - | chr4.4:23888425-23888444 | MS.gene33793:intron | 25.0% |
| ! | TCATCAAATTCAAATGTGAT+TGG | + | chr4.4:23889212-23889231 | None:intergenic | 25.0% |
| ! | TTTAAATTATCCAAGTGTAG+GGG | - | chr4.4:23889828-23889847 | MS.gene33793:intron | 25.0% |
| !! | ATGAAATTTTCAATGCTCTA+CGG | - | chr4.4:23887674-23887693 | MS.gene33793:intron | 25.0% |
| !!! | AGTCTATTTTTCTCTTTGTA+CGG | - | chr4.4:23889764-23889783 | MS.gene33793:intron | 25.0% |
| !!! | CCTTTAGTTTTAACCTTTTA+TGG | - | chr4.4:23887134-23887153 | MS.gene33793:intron | 25.0% |
| !!! | TCAAATGAATTGGTTTTTTG+TGG | - | chr4.4:23887158-23887177 | MS.gene33793:intron | 25.0% |
| !!! | TTTCTAAAAGCTAATTTTCG+AGG | + | chr4.4:23887413-23887432 | None:intergenic | 25.0% |
| AACAAAAGCTGTGGAAAAAA+GGG | - | chr4.4:23887072-23887091 | MS.gene33793:intron | 30.0% | |
| AACAACTATTTCAACATCGA+TGG | - | chr4.4:23888045-23888064 | MS.gene33793:intron | 30.0% | |
| AACTTCCTGGTCATTATAAA+AGG | - | chr4.4:23889164-23889183 | MS.gene33793:intron | 30.0% | |
| ACAGTCAACATTGTATTAGA+AGG | - | chr4.4:23887300-23887319 | MS.gene33793:intron | 30.0% | |
| ACTTCCTGGTCATTATAAAA+GGG | - | chr4.4:23889165-23889184 | MS.gene33793:intron | 30.0% | |
| AGACATGTTCATGAGAAAAA+AGG | + | chr4.4:23887334-23887353 | None:intergenic | 30.0% | |
| AGCTAACATGTATAAGATCA+TGG | - | chr4.4:23888701-23888720 | MS.gene33793:intron | 30.0% | |
| ATGAATAAATAGCAACTGAC+CGG | + | chr4.4:23886968-23886987 | None:intergenic | 30.0% | |
| ATGAGGATATCAGTGTTTAA+AGG | + | chr4.4:23889982-23890001 | None:intergenic | 30.0% | |
| ATTTGTCCAAAGTACAAACA+AGG | + | chr4.4:23887870-23887889 | None:intergenic | 30.0% | |
| CAATTCATTTGAGCCATAAA+AGG | + | chr4.4:23887150-23887169 | None:intergenic | 30.0% | |
| CAGGAAATTTGATTACAATC+AGG | + | chr4.4:23888831-23888850 | None:intergenic | 30.0% | |
| CCTACACTTGGATAATTTAA+AGG | + | chr4.4:23889829-23889848 | None:intergenic | 30.0% | |
| CCTTTAAATTATCCAAGTGT+AGG | - | chr4.4:23889826-23889845 | MS.gene33793:intron | 30.0% | |
| CTCAAGTTTATATCTCACAT+TGG | - | chr4.4:23887797-23887816 | MS.gene33793:intron | 30.0% | |
| TAGTTGATCTACGAAGATTT+GGG | + | chr4.4:23887581-23887600 | None:intergenic | 30.0% | |
| TCTTCAGATTGAATGAATAG+AGG | + | chr4.4:23889906-23889925 | None:intergenic | 30.0% | |
| TGAGGATATCAGTGTTTAAA+GGG | + | chr4.4:23889981-23890000 | None:intergenic | 30.0% | |
| TGCAGCTTCAATTTCATTAT+GGG | + | chr4.4:23888463-23888482 | None:intergenic | 30.0% | |
| TGCGATTCAGTTCAATAAAT+CGG | + | chr4.4:23887654-23887673 | None:intergenic | 30.0% | |
| TTAAATTATCCAAGTGTAGG+GGG | - | chr4.4:23889829-23889848 | MS.gene33793:intron | 30.0% | |
| TTGCAGCTTCAATTTCATTA+TGG | + | chr4.4:23888464-23888483 | None:intergenic | 30.0% | |
| TTTGTCCAAAGTACAAACAA+GGG | + | chr4.4:23887869-23887888 | None:intergenic | 30.0% | |
| ! | AAACTATCCTCTTTTGTCAA+TGG | + | chr4.4:23888678-23888697 | None:intergenic | 30.0% |
| ! | ATTCAAATGTGATTGGTCAT+TGG | + | chr4.4:23889205-23889224 | None:intergenic | 30.0% |
| ! | CTTTTATGGCTCAAATGAAT+TGG | - | chr4.4:23887148-23887167 | MS.gene33793:intron | 30.0% |
| ! | TGAAATTTTCAATGCTCTAC+GGG | - | chr4.4:23887675-23887694 | MS.gene33793:intron | 30.0% |
| !! | AAGCTCGTAGCTTTAATATT+TGG | - | chr4.4:23887027-23887046 | MS.gene33793:intron | 30.0% |
| !! | AGCTCGTAGCTTTAATATTT+GGG | - | chr4.4:23887028-23887047 | MS.gene33793:intron | 30.0% |
| !! | AGTTCAGGTTTTTATACATC+TGG | - | chr4.4:23889004-23889023 | MS.gene33793:intron | 30.0% |
| !! | GGTTCAATTATTTCTGAAAG+AGG | - | chr4.4:23887049-23887068 | MS.gene33793:intron | 30.0% |
| !!! | GAAACTTGCATTTTAAGTTC+AGG | - | chr4.4:23888989-23889008 | MS.gene33793:intron | 30.0% |
| AAAGAGTGGTTAAGTTCCAT+TGG | - | chr4.4:23887740-23887759 | MS.gene33793:intron | 35.0% | |
| AAAGTTGAAGATTACATGGG+AGG | - | chr4.4:23888428-23888447 | MS.gene33793:intron | 35.0% | |
| AACAACTCGTTGATCATAGT+TGG | + | chr4.4:23888400-23888419 | None:intergenic | 35.0% | |
| AACTATGATCAACGAGTTGT+TGG | - | chr4.4:23888399-23888418 | MS.gene33793:intron | 35.0% | |
| AAGTTTGACACTTGATGTAG+CGG | - | chr4.4:23889696-23889715 | MS.gene33793:CDS | 35.0% | |
| AATGATTGACCAAGAACTCA+TGG | - | chr4.4:23888617-23888636 | MS.gene33793:intron | 35.0% | |
| ACAAAAGCTGTGGAAAAAAG+GGG | - | chr4.4:23887073-23887092 | MS.gene33793:intron | 35.0% | |
| ACAATCAGGCGTTAAACAAA+AGG | + | chr4.4:23888817-23888836 | None:intergenic | 35.0% | |
| ACAGGCTACTCCTAAAATTA+GGG | + | chr4.4:23888262-23888281 | None:intergenic | 35.0% | |
| ACATAGCGTATATGCATTCT+TGG | + | chr4.4:23889289-23889308 | None:intergenic | 35.0% | |
| ACATTGTTTGGATATTGCTG+TGG | + | chr4.4:23888318-23888337 | None:intergenic | 35.0% | |
| AGAAGATGAGAACTATAACC+AGG | - | chr4.4:23888221-23888240 | MS.gene33793:intron | 35.0% | |
| CATTGTTTGGATATTGCTGT+GGG | + | chr4.4:23888317-23888336 | None:intergenic | 35.0% | |
| CGATTCAGTTCAATAAATCG+GGG | + | chr4.4:23887652-23887671 | None:intergenic | 35.0% | |
| CTAACAAAAAAGGAACTTCC+TGG | - | chr4.4:23889151-23889170 | MS.gene33793:intron | 35.0% | |
| CTACAACAGATGAACCATAT+CGG | - | chr4.4:23887598-23887617 | MS.gene33793:intron | 35.0% | |
| CTGGGAACCAAGAAAATATT+TGG | + | chr4.4:23888203-23888222 | None:intergenic | 35.0% | |
| GAACAAAAGCTGTGGAAAAA+AGG | - | chr4.4:23887071-23887090 | MS.gene33793:intron | 35.0% | |
| GACAAATTTGCAGTTGAGAT+AGG | - | chr4.4:23887883-23887902 | MS.gene33793:intron | 35.0% | |
| GCAAATGATTGGAATGAGAA+TGG | + | chr4.4:23887995-23888014 | None:intergenic | 35.0% | |
| GCATGAACATTTGACATGTT+TGG | + | chr4.4:23887274-23887293 | None:intergenic | 35.0% | |
| GCGATTCAGTTCAATAAATC+GGG | + | chr4.4:23887653-23887672 | None:intergenic | 35.0% | |
| GGTTATAGTTCTCATCTTCT+GGG | + | chr4.4:23888221-23888240 | None:intergenic | 35.0% | |
| GTAGTTGATCTACGAAGATT+TGG | + | chr4.4:23887582-23887601 | None:intergenic | 35.0% | |
| GTATTGCTAATGTACCCATA+CGG | - | chr4.4:23889481-23889500 | MS.gene33793:intron | 35.0% | |
| GTGAGATATAAACTTGAGAG+AGG | + | chr4.4:23887795-23887814 | None:intergenic | 35.0% | |
| TACAGGCTACTCCTAAAATT+AGG | + | chr4.4:23888263-23888282 | None:intergenic | 35.0% | |
| TATCATCTTGATCTTCGTCT+TGG | + | chr4.4:23888649-23888668 | None:intergenic | 35.0% | |
| TCAATAAATCGGGGATTGTT+GGG | + | chr4.4:23887643-23887662 | None:intergenic | 35.0% | |
| TCAGATTGAATGAATAGAGG+CGG | + | chr4.4:23889903-23889922 | None:intergenic | 35.0% | |
| TGAAATAGTTGTTACCGTCT+AGG | + | chr4.4:23888038-23888057 | None:intergenic | 35.0% | |
| TGGTTATAGTTCTCATCTTC+TGG | + | chr4.4:23888222-23888241 | None:intergenic | 35.0% | |
| TTCAATAAATCGGGGATTGT+TGG | + | chr4.4:23887644-23887663 | None:intergenic | 35.0% | |
| TTGTCCAAAGTACAAACAAG+GGG | + | chr4.4:23887868-23887887 | None:intergenic | 35.0% | |
| TTTATTTGAGAATCTCCAGC+TGG | - | chr4.4:23887385-23887404 | MS.gene33793:CDS | 35.0% | |
| TTTGATACAGTTGTGTGAAC+AGG | - | chr4.4:23887192-23887211 | MS.gene33793:intron | 35.0% | |
| ! | CATGGCATTATTCTTTTGCA+TGG | - | chr4.4:23889383-23889402 | MS.gene33793:intron | 35.0% |
| ! | CTAATACAATGTTGACTGTC+TGG | + | chr4.4:23887299-23887318 | None:intergenic | 35.0% |
| ! | GTATCCCTTTTATAATGACC+AGG | + | chr4.4:23889172-23889191 | None:intergenic | 35.0% |
| ! | TATCCTCATGATTTTTGTGC+AGG | - | chr4.4:23889993-23890012 | MS.gene33793:intron | 35.0% |
| ! | TTACTTTGTTGTACAGACCA+TGG | + | chr4.4:23890036-23890055 | None:intergenic | 35.0% |
| !! | CTTCTTTGTTTACTTGGTGT+TGG | + | chr4.4:23886867-23886886 | None:intergenic | 35.0% |
| !! | TTGTATACTCAGCTTTAAGC+TGG | + | chr4.4:23888515-23888534 | None:intergenic | 35.0% |
| AAGTTAGGTGTTCATCATGC+CGG | - | chr4.4:23889512-23889531 | MS.gene33793:intron | 40.0% | |
| AATAGTTGTTACCGTCTAGG+TGG | + | chr4.4:23888035-23888054 | None:intergenic | 40.0% | |
| ACCTATTCCAATGACGTTCT+AGG | - | chr4.4:23888144-23888163 | MS.gene33793:intron | 40.0% | |
| ACTACGCTCGTGTAATTAGA+AGG | - | chr4.4:23888733-23888752 | MS.gene33793:intron | 40.0% | |
| AGCACACAACTACCAATAAC+AGG | + | chr4.4:23889075-23889094 | None:intergenic | 40.0% | |
| AGGTTGGACAAGTTAAGTGT+GGG | - | chr4.4:23889449-23889468 | MS.gene33793:intron | 40.0% | |
| ATAAATAGCAACTGACCGGA+TGG | + | chr4.4:23886964-23886983 | None:intergenic | 40.0% | |
| ATAGTTGGAGTAGAACTGAG+CGG | + | chr4.4:23888385-23888404 | None:intergenic | 40.0% | |
| ATCTACGAAGATTTGGGTAG+TGG | + | chr4.4:23887575-23887594 | None:intergenic | 40.0% | |
| CAGATTGAATGAATAGAGGC+GGG | + | chr4.4:23889902-23889921 | None:intergenic | 40.0% | |
| CATGATGAACACCTAACTTG+TGG | + | chr4.4:23889511-23889530 | None:intergenic | 40.0% | |
| CCACTTTGACATAAAGTGGA+GGG | + | chr4.4:23887710-23887729 | None:intergenic | 40.0% | |
| CCTCCACTTTATGTCAAAGT+GGG | - | chr4.4:23887708-23887727 | MS.gene33793:intron | 40.0% | |
| GAATGGTGAATGATCCGATA+TGG | + | chr4.4:23887615-23887634 | None:intergenic | 40.0% | |
| GTAAACAAAGAAGACGACGA+CGG | - | chr4.4:23886874-23886893 | MS.gene33793:CDS | 40.0% | |
| TAAAGGAAGCTTCAAGCTTC+AGG | + | chr4.4:23887120-23887139 | None:intergenic | 40.0% | |
| TAAATAGCAACTGACCGGAT+GGG | + | chr4.4:23886963-23886982 | None:intergenic | 40.0% | |
| TATAACCCTGATACCATGTC+AGG | - | chr4.4:23887469-23887488 | MS.gene33793:CDS | 40.0% | |
| TCCTAGAACGTCATTGGAAT+AGG | + | chr4.4:23888148-23888167 | None:intergenic | 40.0% | |
| TGAAAGAGGAACAAAAGCTG+TGG | - | chr4.4:23887063-23887082 | MS.gene33793:intron | 40.0% | |
| TGTCCCACTTTGACATAAAG+TGG | + | chr4.4:23887714-23887733 | None:intergenic | 40.0% | |
| TGTTTATGCCTCAAACAGAG+AGG | - | chr4.4:23887828-23887847 | MS.gene33793:intron | 40.0% | |
| ! | ACATAAAGTGGAGGGTGTAA+AGG | + | chr4.4:23887702-23887721 | None:intergenic | 40.0% |
| ! | ATCAACCTGGCCCTAATTTT+AGG | - | chr4.4:23888249-23888268 | MS.gene33793:intron | 40.0% |
| ! | CGTCGTCTTCTTTGTTTACT+TGG | + | chr4.4:23886873-23886892 | None:intergenic | 40.0% |
| ! | CTATCCTCTTTTGTCAATGG+CGG | + | chr4.4:23888675-23888694 | None:intergenic | 40.0% |
| ! | GGTTTTGCTCAAATGGTTTG+TGG | - | chr4.4:23887213-23887232 | MS.gene33793:intron | 40.0% |
| ! | GTGAACAGGTTTTGCTCAAA+TGG | - | chr4.4:23887206-23887225 | MS.gene33793:intron | 40.0% |
| ! | TATCCTCTTTTGTCAATGGC+GGG | + | chr4.4:23888674-23888693 | None:intergenic | 40.0% |
| ! | TTGAAAATTGTGTCGGCGTT+GGG | + | chr4.4:23888345-23888364 | None:intergenic | 40.0% |
| ! | TTTGAAAATTGTGTCGGCGT+TGG | + | chr4.4:23888346-23888365 | None:intergenic | 40.0% |
| !! | ATTCCAATGACGTTCTAGGA+CGG | - | chr4.4:23888148-23888167 | MS.gene33793:intron | 40.0% |
| !! | GTGGGACATTTTGAAAAGAG+TGG | - | chr4.4:23887726-23887745 | MS.gene33793:intron | 40.0% |
| !! | TCATCAGCCATTTGCTGTTT+GGG | + | chr4.4:23888122-23888141 | None:intergenic | 40.0% |
| !! | TTCATCAGCCATTTGCTGTT+TGG | + | chr4.4:23888123-23888142 | None:intergenic | 40.0% |
| AAACCAACTCCTCCCAAATC+TGG | - | chr4.4:23890054-23890073 | MS.gene33793:CDS | 45.0% | |
| AATGGGGTGGTGCAAATGAT+TGG | + | chr4.4:23888006-23888025 | None:intergenic | 45.0% | |
| ACAGCTTATGAGTTGCAGTG+CGG | + | chr4.4:23888773-23888792 | None:intergenic | 45.0% | |
| AGCTGTGGAAAAAAGGGGTT+TGG | - | chr4.4:23887078-23887097 | MS.gene33793:intron | 45.0% | |
| ATCATCAATCCCCCTACACT+TGG | + | chr4.4:23889841-23889860 | None:intergenic | 45.0% | |
| ATCGGATCATTCACCATTCG+TGG | - | chr4.4:23887616-23887635 | MS.gene33793:intron | 45.0% | |
| ATCTTCATCCAGTCCTGACA+TGG | + | chr4.4:23887485-23887504 | None:intergenic | 45.0% | |
| ATTGAATGAATAGAGGCGGG+TGG | + | chr4.4:23889899-23889918 | None:intergenic | 45.0% | |
| CATTTGACATGTTTGGCACC+TGG | + | chr4.4:23887267-23887286 | None:intergenic | 45.0% | |
| CCCACTTTGACATAAAGTGG+AGG | + | chr4.4:23887711-23887730 | None:intergenic | 45.0% | |
| CCCTCCACTTTATGTCAAAG+TGG | - | chr4.4:23887707-23887726 | MS.gene33793:intron | 45.0% | |
| CGCTGAAGAGTTCAGTATTG+AGG | + | chr4.4:23888077-23888096 | None:intergenic | 45.0% | |
| CGTCTAGGTGGTTCCAAAAT+GGG | + | chr4.4:23888023-23888042 | None:intergenic | 45.0% | |
| CTACTCCTAAAATTAGGGCC+AGG | + | chr4.4:23888257-23888276 | None:intergenic | 45.0% | |
| CTGCCTGCACAAAAATCATG+AGG | + | chr4.4:23889999-23890018 | None:intergenic | 45.0% | |
| GCGTATATGCATTCTTGGAG+AGG | + | chr4.4:23889284-23889303 | None:intergenic | 45.0% | |
| GTAGTGGTCCTTGAAAAGGA+CGG | + | chr4.4:23887559-23887578 | None:intergenic | 45.0% | |
| GTCTAGGTGGTTCCAAAATG+GGG | + | chr4.4:23888022-23888041 | None:intergenic | 45.0% | |
| GTGGGATATCATCATCGCTT+GGG | + | chr4.4:23888299-23888318 | None:intergenic | 45.0% | |
| TAACCAGGATGACATCAACC+TGG | - | chr4.4:23888236-23888255 | MS.gene33793:intron | 45.0% | |
| TAGTTGGAGTAGAACTGAGC+GGG | + | chr4.4:23888384-23888403 | None:intergenic | 45.0% | |
| TGACTGACCCAAACAGCAAA+TGG | - | chr4.4:23888112-23888131 | MS.gene33793:intron | 45.0% | |
| TGCCAGTCAAGTAGCCAAAA+TGG | + | chr4.4:23888174-23888193 | None:intergenic | 45.0% | |
| TGGACGAACAGTCCTGTTAT+TGG | - | chr4.4:23889060-23889079 | MS.gene33793:intron | 45.0% | |
| TGGGATATCATCATCGCTTG+GGG | + | chr4.4:23888298-23888317 | None:intergenic | 45.0% | |
| TGTGGGATATCATCATCGCT+TGG | + | chr4.4:23888300-23888319 | None:intergenic | 45.0% | |
| TTGAATGAATAGAGGCGGGT+GGG | + | chr4.4:23889898-23889917 | None:intergenic | 45.0% | |
| TTGGTCAATCATTTCGCCAG+TGG | + | chr4.4:23888610-23888629 | None:intergenic | 45.0% | |
| ! | ATAACTGGGGTGTTACCTTC+AGG | + | chr4.4:23887514-23887533 | None:intergenic | 45.0% |
| ! | ATTGGTAGTTGTGTGCTTGC+TGG | - | chr4.4:23889078-23889097 | MS.gene33793:intron | 45.0% |
| ! | CAGGTTGGACAAGTTAAGTG+TGG | - | chr4.4:23889448-23889467 | MS.gene33793:intron | 45.0% |
| ! | CTTTGTTGTACAGACCATGG+AGG | + | chr4.4:23890033-23890052 | None:intergenic | 45.0% |
| ! | GCTTCCCCTTGTTTGTACTT+TGG | - | chr4.4:23887861-23887880 | MS.gene33793:intron | 45.0% |
| ! | TAACTGGGGTGTTACCTTCA+GGG | + | chr4.4:23887513-23887532 | None:intergenic | 45.0% |
| ! | TCATTTGCACCACCCCATTT+TGG | - | chr4.4:23888007-23888026 | MS.gene33793:intron | 45.0% |
| ! | TGGCTGGAGCTTTGATAACT+GGG | + | chr4.4:23887528-23887547 | None:intergenic | 45.0% |
| ! | TTGGGTAGTGGTCCTTGAAA+AGG | + | chr4.4:23887563-23887582 | None:intergenic | 45.0% |
| !! | CTAATTTTCGAGGAACCAGC+TGG | + | chr4.4:23887403-23887422 | None:intergenic | 45.0% |
| !! | CTTGAGAGCATCGAGCAATA+GGG | + | chr4.4:23887941-23887960 | None:intergenic | 45.0% |
| !! | TAACTTGTGGAGCACCGTAT+GGG | + | chr4.4:23889498-23889517 | None:intergenic | 45.0% |
| !! | TGCCGGTTTGTGACAGAAAT+CGG | - | chr4.4:23889529-23889548 | MS.gene33793:intron | 45.0% |
| !!! | CCATTTTGGAACCACCTAGA+CGG | - | chr4.4:23888021-23888040 | MS.gene33793:intron | 45.0% |
| AACTGCTTGTCCTGAGCCTT+CGG | + | chr4.4:23888574-23888593 | None:intergenic | 50.0% | |
| ACTCATTCCTTCGTCACAGC+TGG | - | chr4.4:23889424-23889443 | MS.gene33793:intron | 50.0% | |
| AGACCCGCCATTGACAAAAG+AGG | - | chr4.4:23888668-23888687 | MS.gene33793:intron | 50.0% | |
| CAACCAGATTTGGGAGGAGT+TGG | + | chr4.4:23890060-23890079 | None:intergenic | 50.0% | |
| CAACTCAAGACCTGCTGCAA+TGG | - | chr4.4:23888542-23888561 | MS.gene33793:intron | 50.0% | |
| CAGCTTATGAGTTGCAGTGC+GGG | + | chr4.4:23888772-23888791 | None:intergenic | 50.0% | |
| CATACGGTGCTCCACAAGTT+AGG | - | chr4.4:23889497-23889516 | MS.gene33793:intron | 50.0% | |
| CCAGTCCTGACATGGTATCA+GGG | + | chr4.4:23887477-23887496 | None:intergenic | 50.0% | |
| CCCCGATTTCTGTCACAAAC+CGG | + | chr4.4:23889534-23889553 | None:intergenic | 50.0% | |
| CCGTCTAGGTGGTTCCAAAA+TGG | + | chr4.4:23888024-23888043 | None:intergenic | 50.0% | |
| GATGAAGATACGACCCCTGA+AGG | - | chr4.4:23887496-23887515 | MS.gene33793:intron | 50.0% | |
| GGAATGAGAATGGAGCTGTC+AGG | + | chr4.4:23887985-23888004 | None:intergenic | 50.0% | |
| GTATTTAGCCTCCTCAGCAG+TGG | + | chr4.4:23887773-23887792 | None:intergenic | 50.0% | |
| TAGGTGGTTCCAAAATGGGG+TGG | + | chr4.4:23888019-23888038 | None:intergenic | 50.0% | |
| TATCATCATCGCTTGGGGCT+AGG | + | chr4.4:23888293-23888312 | None:intergenic | 50.0% | |
| TCCAGTCCTGACATGGTATC+AGG | + | chr4.4:23887478-23887497 | None:intergenic | 50.0% | |
| TGGCATGAGCCATGAGTTCT+TGG | + | chr4.4:23888629-23888648 | None:intergenic | 50.0% | |
| TTGACATGTTTGGCACCTGG+TGG | + | chr4.4:23887264-23887283 | None:intergenic | 50.0% | |
| TTGTGCAGGCAGACAACAAG+CGG | - | chr4.4:23890007-23890026 | MS.gene33793:intron | 50.0% | |
| ! | AACTGGGGTGTTACCTTCAG+GGG | + | chr4.4:23887512-23887531 | None:intergenic | 50.0% |
| ! | CCGGTTTGTGACAGAAATCG+GGG | - | chr4.4:23889531-23889550 | MS.gene33793:intron | 50.0% |
| ! | CTGGCTGGAGCTTTGATAAC+TGG | + | chr4.4:23887529-23887548 | None:intergenic | 50.0% |
| ! | GGCTGGAGCTTTGATAACTG+GGG | + | chr4.4:23887527-23887546 | None:intergenic | 50.0% |
| !! | CTAACTTGTGGAGCACCGTA+TGG | + | chr4.4:23889499-23889518 | None:intergenic | 50.0% |
| !! | GCCGGTTTGTGACAGAAATC+GGG | - | chr4.4:23889530-23889549 | MS.gene33793:intron | 50.0% |
| !! | GCTTGAGAGCATCGAGCAAT+AGG | + | chr4.4:23887942-23887961 | None:intergenic | 50.0% |
| !!! | ACGTTCTAGGACGGCCATTT+TGG | - | chr4.4:23888157-23888176 | MS.gene33793:intron | 50.0% |
| !!! | GGCCATTTTGGCTACTTGAC+TGG | - | chr4.4:23888169-23888188 | MS.gene33793:intron | 50.0% |
| AACCTGACCAGCTGTGACGA+AGG | + | chr4.4:23889434-23889453 | None:intergenic | 55.0% | |
| AACTGACCGGATGGGAGTGA+CGG | + | chr4.4:23886955-23886974 | None:intergenic | 55.0% | |
| ATAGGTTGCCAACCAGGTGG+CGG | + | chr4.4:23886901-23886920 | None:intergenic | 55.0% | |
| ATGGATACAGCCGAAGGCTC+AGG | - | chr4.4:23888561-23888580 | MS.gene33793:intron | 55.0% | |
| ATTTCGCCAGTGGCGCGAAA+TGG | + | chr4.4:23888600-23888619 | None:intergenic | 55.0% | |
| CCCTGATACCATGTCAGGAC+TGG | - | chr4.4:23887474-23887493 | MS.gene33793:CDS | 55.0% | |
| CCTCAAACAGAGAGGCTTGC+AGG | - | chr4.4:23887836-23887855 | MS.gene33793:intron | 55.0% | |
| CCTGCAAGCCTCTCTGTTTG+AGG | + | chr4.4:23887839-23887858 | None:intergenic | 55.0% | |
| GCGTTGGGCACGACATTGTT+TGG | + | chr4.4:23888330-23888349 | None:intergenic | 55.0% | |
| GCTGCAATGGATACAGCCGA+AGG | - | chr4.4:23888555-23888574 | MS.gene33793:intron | 55.0% | |
| GGAATAGGTTGCCAACCAGG+TGG | + | chr4.4:23886904-23886923 | None:intergenic | 55.0% | |
| GGGATTGTTGGGTCCACGAA+TGG | + | chr4.4:23887632-23887651 | None:intergenic | 55.0% | |
| GTGGTCCTTGAAAAGGACGG+AGG | + | chr4.4:23887556-23887575 | None:intergenic | 55.0% | |
| TCGATGCTCTCAAGCCGACT+CGG | - | chr4.4:23887947-23887966 | MS.gene33793:intron | 55.0% | |
| TCGGCTGTATCCATTGCAGC+AGG | + | chr4.4:23888555-23888574 | None:intergenic | 55.0% | |
| TGAAAAGGACGGAGGTCTGC+TGG | + | chr4.4:23887548-23887567 | None:intergenic | 55.0% | |
| TGGCCGTCCTAGAACGTCAT+TGG | + | chr4.4:23888154-23888173 | None:intergenic | 55.0% | |
| TTCCTTCGTCACAGCTGGTC+AGG | - | chr4.4:23889429-23889448 | MS.gene33793:intron | 55.0% | |
| TTCGTCACAGCTGGTCAGGT+TGG | - | chr4.4:23889433-23889452 | MS.gene33793:intron | 55.0% | |
| TTGGAACTCCACCACTGCTG+AGG | - | chr4.4:23887759-23887778 | MS.gene33793:intron | 55.0% | |
| TTTAGCCTCCTCAGCAGTGG+TGG | + | chr4.4:23887770-23887789 | None:intergenic | 55.0% | |
| TTTCGCCAGTGGCGCGAAAT+GGG | + | chr4.4:23888599-23888618 | None:intergenic | 55.0% | |
| ! | ACTCTTCAGCGCACTGATGC+AGG | - | chr4.4:23888086-23888105 | MS.gene33793:intron | 55.0% |
| ! | CACCTGGTGGATACGAAAGC+AGG | + | chr4.4:23887251-23887270 | None:intergenic | 55.0% |
| ! | CAGCAGTGGTGGAGTTCCAA+TGG | + | chr4.4:23887759-23887778 | None:intergenic | 55.0% |
| ! | CTGGTGGATACGAAAGCAGG+CGG | + | chr4.4:23887248-23887267 | None:intergenic | 55.0% |
| ! | GCAGACCTCCGTCCTTTTCA+AGG | - | chr4.4:23887548-23887567 | MS.gene33793:intron | 55.0% |
| !! | GAGCATCGAGCAATAGGGTG+AGG | + | chr4.4:23887936-23887955 | None:intergenic | 55.0% |
| CAGACAACAAGCGGCCTCCA+TGG | - | chr4.4:23890016-23890035 | MS.gene33793:intron | 60.0% | |
| CGCCTGCTTTCGTATCCACC+AGG | - | chr4.4:23887246-23887265 | MS.gene33793:intron | 60.0% | |
| GAACTCCACCACTGCTGAGG+AGG | - | chr4.4:23887762-23887781 | MS.gene33793:intron | 60.0% | |
| GGGGGAATAGGTTGCCAACC+AGG | + | chr4.4:23886907-23886926 | None:intergenic | 60.0% | |
| GTTGTCCCATTTCGCGCCAC+TGG | - | chr4.4:23888591-23888610 | MS.gene33793:intron | 60.0% | |
| TAGGTTGCCAACCAGGTGGC+GGG | + | chr4.4:23886900-23886919 | None:intergenic | 60.0% | |
| TCATCGCTTGGGGCTAGGTG+TGG | + | chr4.4:23888288-23888307 | None:intergenic | 60.0% | |
| TGGGGCTAGGTGTGGAGTAC+AGG | + | chr4.4:23888280-23888299 | None:intergenic | 60.0% | |
| ! | CGATGCTCTCAAGCCGACTC+GGG | - | chr4.4:23887948-23887967 | MS.gene33793:intron | 60.0% |
| !! | GGGCCAGGTTGATGTCATCC+TGG | + | chr4.4:23888242-23888261 | None:intergenic | 60.0% |
| AAGGACGGAGGTCTGCTGGC+TGG | + | chr4.4:23887544-23887563 | None:intergenic | 65.0% | |
| GGCGTTCCAGTGACCCGAGT+CGG | + | chr4.4:23887964-23887983 | None:intergenic | 65.0% | |
| TGACCGGATGGGAGTGACGG+TGG | + | chr4.4:23886952-23886971 | None:intergenic | 65.0% | |
| !! | CTCAAGCCGACTCGGGTCAC+TGG | - | chr4.4:23887955-23887974 | MS.gene33793:intron | 65.0% |
| CCGCCACCGTCACTCCCATC+CGG | - | chr4.4:23886946-23886965 | MS.gene33793:intron | 70.0% | |
| CCGGATGGGAGTGACGGTGG+CGG | + | chr4.4:23886949-23886968 | None:intergenic | 70.0% | |
| TTCCCCCACCGCAACGCCCA+CGG | - | chr4.4:23886920-23886939 | MS.gene33793:intron | 70.0% | |
| ! | GATGGGAGTGACGGTGGCGG+TGG | + | chr4.4:23886946-23886965 | None:intergenic | 70.0% |
| ! | GGGCGTTGCGGTGGGGGAAT+AGG | + | chr4.4:23886919-23886938 | None:intergenic | 70.0% |
| ACGACGGCCCGCCACCTGGT+TGG | - | chr4.4:23886890-23886909 | MS.gene33793:CDS | 75.0% | |
| ! | AGTGACGGTGGCGGTGGCCG+TGG | + | chr4.4:23886940-23886959 | None:intergenic | 75.0% |
| ! | GTGACGGTGGCGGTGGCCGT+GGG | + | chr4.4:23886939-23886958 | None:intergenic | 75.0% |
| ! | GTGGCCGTGGGCGTTGCGGT+GGG | + | chr4.4:23886927-23886946 | None:intergenic | 75.0% |
| ! | TGGCCGTGGGCGTTGCGGTG+GGG | + | chr4.4:23886926-23886945 | None:intergenic | 75.0% |
| ! | GACGACGACGGCCCGCCACC+TGG | - | chr4.4:23886886-23886905 | MS.gene33793:CDS | 80.0% |
| !! | GGCCGTGGGCGTTGCGGTGG+GGG | + | chr4.4:23886925-23886944 | None:intergenic | 80.0% |
| !! | GGCGGTGGCCGTGGGCGTTG+CGG | + | chr4.4:23886931-23886950 | None:intergenic | 80.0% |
| !! | GGTGGCCGTGGGCGTTGCGG+TGG | + | chr4.4:23886928-23886947 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 23886853 | 23890083 | 23886853 | ID=MS.gene33793 |
| chr4.4 | mRNA | 23886853 | 23890083 | 23886853 | ID=MS.gene33793.t1;Parent=MS.gene33793 |
| chr4.4 | exon | 23890029 | 23890083 | 23890029 | ID=MS.gene33793.t1.exon1;Parent=MS.gene33793.t1 |
| chr4.4 | CDS | 23890029 | 23890083 | 23890029 | ID=cds.MS.gene33793.t1;Parent=MS.gene33793.t1 |
| chr4.4 | exon | 23889615 | 23889722 | 23889615 | ID=MS.gene33793.t1.exon2;Parent=MS.gene33793.t1 |
| chr4.4 | CDS | 23889615 | 23889722 | 23889615 | ID=cds.MS.gene33793.t1;Parent=MS.gene33793.t1 |
| chr4.4 | exon | 23887384 | 23887493 | 23887384 | ID=MS.gene33793.t1.exon3;Parent=MS.gene33793.t1 |
| chr4.4 | CDS | 23887384 | 23887493 | 23887384 | ID=cds.MS.gene33793.t1;Parent=MS.gene33793.t1 |
| chr4.4 | exon | 23886853 | 23886921 | 23886853 | ID=MS.gene33793.t1.exon4;Parent=MS.gene33793.t1 |
| chr4.4 | CDS | 23886853 | 23886921 | 23886853 | ID=cds.MS.gene33793.t1;Parent=MS.gene33793.t1 |
| Gene Sequence |
| Protein sequence |
