Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33935.t1 | XP_013469537.1 | 90.3 | 423 | 41 | 0 | 1 | 423 | 19 | 441 | 6.00E-176 | 627.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33935.t1 | Q8VZ14 | 56.4 | 433 | 178 | 2 | 1 | 423 | 17 | 448 | 3.5e-124 | 446.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33935.t1 | A0A072VZT8 | 90.3 | 423 | 41 | 0 | 1 | 423 | 19 | 441 | 4.3e-176 | 627.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene33935 | -0.825873 | 3.70E-54 | -1.69E-46 |
| MS.gene049669 | MS.gene33935 | -0.816362 | 5.75E-52 | -1.69E-46 |
| MS.gene049825 | MS.gene33935 | -0.803771 | 2.97E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene33935 | -0.806408 | 8.35E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene33935 | -0.836313 | 1.01E-56 | -1.69E-46 |
| MS.gene050228 | MS.gene33935 | -0.842334 | 2.76E-58 | -1.69E-46 |
| MS.gene050623 | MS.gene33935 | 0.847964 | 8.28E-60 | -1.69E-46 |
| MS.gene050719 | MS.gene33935 | -0.805938 | 1.05E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene33935 | -0.809375 | 1.95E-50 | -1.69E-46 |
| MS.gene050780 | MS.gene33935 | -0.818402 | 2.00E-52 | -1.69E-46 |
| MS.gene051492 | MS.gene33935 | -0.804545 | 2.05E-49 | -1.69E-46 |
| MS.gene052176 | MS.gene33935 | -0.849283 | 3.57E-60 | -1.69E-46 |
| MS.gene052302 | MS.gene33935 | -0.807269 | 5.49E-50 | -1.69E-46 |
| MS.gene052358 | MS.gene33935 | 0.846521 | 2.06E-59 | -1.69E-46 |
| MS.gene052376 | MS.gene33935 | -0.819802 | 9.59E-53 | -1.69E-46 |
| MS.gene052586 | MS.gene33935 | -0.82171 | 3.49E-53 | -1.69E-46 |
| MS.gene053054 | MS.gene33935 | 0.811177 | 7.98E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene33935 | -0.83789 | 3.98E-57 | -1.69E-46 |
| MS.gene05415 | MS.gene33935 | -0.801097 | 1.06E-48 | -1.69E-46 |
| MS.gene054291 | MS.gene33935 | 0.804549 | 2.05E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene33935 | -0.800193 | 1.62E-48 | -1.69E-46 |
| MS.gene05468 | MS.gene33935 | -0.802402 | 5.71E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene33935 | -0.817954 | 2.52E-52 | -1.69E-46 |
| MS.gene056091 | MS.gene33935 | -0.817695 | 2.89E-52 | -1.69E-46 |
| MS.gene056403 | MS.gene33935 | -0.806741 | 7.10E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene33935 | -0.810888 | 9.22E-51 | -1.69E-46 |
| MS.gene056638 | MS.gene33935 | -0.80458 | 2.02E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene33935 | -0.827235 | 1.75E-54 | -1.69E-46 |
| MS.gene058908 | MS.gene33935 | -0.80191 | 7.20E-49 | -1.69E-46 |
| MS.gene058911 | MS.gene33935 | -0.80955 | 1.79E-50 | -1.69E-46 |
| MS.gene060572 | MS.gene33935 | -0.831554 | 1.56E-55 | -1.69E-46 |
| MS.gene061040 | MS.gene33935 | 0.868266 | 7.42E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33935.t1 | MTR_1g096780 | 97.872 | 423 | 9 | 0 | 1 | 423 | 19 | 441 | 0.0 | 842 |
| MS.gene33935.t1 | MTR_8g073120 | 31.061 | 132 | 72 | 7 | 149 | 269 | 33 | 156 | 2.18e-12 | 66.2 |
| MS.gene33935.t1 | MTR_2g035800 | 30.233 | 129 | 78 | 5 | 143 | 265 | 28 | 150 | 2.58e-12 | 65.1 |
| MS.gene33935.t1 | MTR_1g047180 | 37.179 | 78 | 44 | 2 | 182 | 259 | 652 | 724 | 4.68e-12 | 68.6 |
| MS.gene33935.t1 | MTR_5g026260 | 33.750 | 80 | 51 | 1 | 195 | 274 | 483 | 560 | 6.48e-12 | 67.8 |
| MS.gene33935.t1 | MTR_3g067995 | 52.830 | 53 | 24 | 1 | 216 | 268 | 212 | 263 | 1.59e-11 | 65.1 |
| MS.gene33935.t1 | MTR_4g064550 | 56.000 | 50 | 21 | 1 | 210 | 259 | 208 | 256 | 1.77e-11 | 64.7 |
| MS.gene33935.t1 | MTR_3g099650 | 31.148 | 122 | 71 | 6 | 149 | 259 | 59 | 178 | 1.89e-11 | 65.9 |
| MS.gene33935.t1 | MTR_4g064560 | 56.000 | 50 | 21 | 1 | 210 | 259 | 202 | 250 | 3.83e-11 | 63.9 |
| MS.gene33935.t1 | MTR_7g116180 | 32.374 | 139 | 71 | 6 | 142 | 259 | 2 | 138 | 7.00e-11 | 61.2 |
| MS.gene33935.t1 | MTR_7g116220 | 31.111 | 135 | 64 | 5 | 153 | 259 | 8 | 141 | 7.27e-11 | 61.2 |
| MS.gene33935.t1 | MTR_6g007680 | 35.345 | 116 | 62 | 6 | 147 | 259 | 3 | 108 | 9.40e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33935.t1 | AT1G71980 | 66.282 | 433 | 135 | 3 | 1 | 423 | 17 | 448 | 0.0 | 525 |
| MS.gene33935.t1 | AT4G09560 | 51.701 | 441 | 180 | 11 | 2 | 421 | 18 | 446 | 3.24e-127 | 375 |
| MS.gene33935.t1 | AT1G35630 | 57.143 | 287 | 123 | 0 | 1 | 287 | 17 | 303 | 6.03e-118 | 347 |
| MS.gene33935.t1 | AT1G35625 | 56.803 | 294 | 113 | 2 | 1 | 287 | 17 | 303 | 8.20e-115 | 339 |
| MS.gene33935.t1 | AT1G22670 | 47.685 | 432 | 183 | 11 | 3 | 422 | 22 | 422 | 1.34e-113 | 339 |
| MS.gene33935.t1 | AT5G66160 | 43.985 | 266 | 139 | 5 | 1 | 264 | 22 | 279 | 1.36e-65 | 212 |
| MS.gene33935.t1 | AT5G66160 | 43.985 | 266 | 139 | 5 | 1 | 264 | 22 | 279 | 3.64e-65 | 211 |
| MS.gene33935.t1 | AT4G09120 | 29.545 | 220 | 139 | 7 | 144 | 356 | 47 | 257 | 8.16e-14 | 72.8 |
| MS.gene33935.t1 | AT5G07225 | 38.356 | 73 | 40 | 2 | 190 | 262 | 165 | 232 | 2.64e-12 | 66.6 |
| MS.gene33935.t1 | AT1G33480 | 32.432 | 148 | 86 | 7 | 190 | 326 | 75 | 219 | 1.20e-11 | 65.1 |
| MS.gene33935.t1 | AT3G55530 | 54.000 | 50 | 22 | 1 | 216 | 265 | 210 | 258 | 1.33e-11 | 65.1 |
| MS.gene33935.t1 | AT3G18773 | 27.742 | 155 | 98 | 4 | 115 | 259 | 22 | 172 | 1.37e-11 | 64.3 |
| MS.gene33935.t1 | AT1G20823 | 38.889 | 72 | 42 | 2 | 190 | 260 | 84 | 154 | 4.46e-11 | 62.4 |
| MS.gene33935.t1 | AT4G09100 | 37.662 | 77 | 44 | 3 | 186 | 259 | 52 | 127 | 4.99e-11 | 60.5 |
| MS.gene33935.t1 | AT3G10910 | 40.278 | 72 | 40 | 3 | 190 | 260 | 88 | 157 | 5.44e-11 | 61.6 |
Find 102 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTGCCTGTGTGGATTCT+TGG | 0.196122 | 1.4:-75283446 | MS.gene33935:CDS |
| TCATCTTCAGCAATACAAAT+TGG | 0.282025 | 1.4:-75283270 | MS.gene33935:CDS |
| CTTGCATCACGCTTGCAAAC+TGG | 0.302893 | 1.4:+75283399 | None:intergenic |
| TGTGTGAAGCTAGAGATCTT+TGG | 0.332608 | 1.4:+75283115 | None:intergenic |
| GATGATATTGAAGCTAATTT+CGG | 0.338035 | 1.4:-75286244 | MS.gene33935:intron |
| CAGAGCTACGGCTGAAGCTT+AGG | 0.338278 | 1.4:+75283157 | None:intergenic |
| GCTCCATCGGTCAAAGGTTC+TGG | 0.338386 | 1.4:-75285464 | MS.gene33935:CDS |
| TCTCATGTTCGTGAATTTCA+TGG | 0.340632 | 1.4:-75284395 | MS.gene33935:CDS |
| AAGAGGCTCTGCCAAGAATA+AGG | 0.342445 | 1.4:+75285430 | None:intergenic |
| TGCGTCTGCCAACTCCCTTC+CGG | 0.343050 | 1.4:-75282923 | MS.gene33935:CDS |
| TGGATTCTTGGCTTACTTCA+TGG | 0.348035 | 1.4:-75283434 | MS.gene33935:CDS |
| GCTGCTAAGGTTGTGTTGAT+TGG | 0.367855 | 1.4:-75286289 | MS.gene33935:CDS |
| GTATTTGTTTCAAAAGCTTC+GGG | 0.371506 | 1.4:-75284602 | MS.gene33935:CDS |
| GGGGTGTAGCTTTGAGGAAA+AGG | 0.371973 | 1.4:-75285330 | MS.gene33935:CDS |
| GGTATTTGTTTCAAAAGCTT+CGG | 0.372526 | 1.4:-75284603 | MS.gene33935:CDS |
| CTTAGAGAAGGCTGATTGTA+AGG | 0.389822 | 1.4:+75283201 | None:intergenic |
| GTTAGCTATGTCTGCAGTGC+TGG | 0.390348 | 1.4:-75284474 | MS.gene33935:CDS |
| CTCCAGCGCAATAATCTTCA+AGG | 0.399738 | 1.4:+75284282 | None:intergenic |
| CCACTTGTTTCTTCGTCCGC+AGG | 0.412166 | 1.4:-75284451 | MS.gene33935:CDS |
| GCACTGCAGACATAGCTAAC+AGG | 0.412818 | 1.4:+75284477 | None:intergenic |
| GAGTGGATGCTGCTGATGAC+TGG | 0.415213 | 1.4:+75282981 | None:intergenic |
| AGAATACGGAGCCTTATTCT+TGG | 0.417360 | 1.4:-75285441 | MS.gene33935:CDS |
| CTGCTAAGGTTGTGTTGATT+GGG | 0.421036 | 1.4:-75286288 | MS.gene33935:CDS |
| TTGCATCACGCTTGCAAACT+GGG | 0.424562 | 1.4:+75283400 | None:intergenic |
| GCGTGATGCAAGAACGGGTC+TGG | 0.427986 | 1.4:-75283388 | MS.gene33935:CDS |
| GCCGTAGCTCTGTGGATCTT+AGG | 0.428506 | 1.4:-75283146 | MS.gene33935:CDS |
| GTGTGCTATGGCGGCTGCTA+AGG | 0.439742 | 1.4:-75286302 | None:intergenic |
| GTGTGAAGCTAGAGATCTTT+GGG | 0.442142 | 1.4:+75283116 | None:intergenic |
| AAGAGGATGCCGCAGATGAC+GGG | 0.460435 | 1.4:+75283322 | None:intergenic |
| CTTACAATCAGCCTTCTCTA+AGG | 0.462445 | 1.4:-75283200 | MS.gene33935:CDS |
| TGCCTTGAAGATTATTGCGC+TGG | 0.467679 | 1.4:-75284284 | MS.gene33935:CDS |
| AGAGCTACGGCTGAAGCTTA+GGG | 0.468094 | 1.4:+75283158 | None:intergenic |
| AATTGAACAATTCAACATTC+CGG | 0.470205 | 1.4:+75282904 | None:intergenic |
| ACGCTTGCAAACTGGGCAAA+AGG | 0.471145 | 1.4:+75283407 | None:intergenic |
| AAACTTACTGAAGCATTGCT+TGG | 0.472660 | 1.4:+75283015 | None:intergenic |
| TGCAAGCGTGATGCAAGAAC+GGG | 0.474555 | 1.4:-75283393 | MS.gene33935:CDS |
| TTGAGGCTGACTCACTATAT+CGG | 0.477494 | 1.4:+75282959 | None:intergenic |
| GTCAAAGGTTCTGGAGAATA+CGG | 0.481854 | 1.4:-75285455 | MS.gene33935:CDS |
| ACTGAAGCATTGCTTGGACT+TGG | 0.496274 | 1.4:+75283021 | None:intergenic |
| CGAACATGAGAAGAAGTTTG+AGG | 0.503157 | 1.4:+75284407 | None:intergenic |
| GTAGCTTTGAGGAAAAGGTT+AGG | 0.503932 | 1.4:-75285325 | MS.gene33935:CDS |
| ACGGCTGAAGCTTAGGGAGG+GGG | 0.504414 | 1.4:+75283164 | None:intergenic |
| TCAACATTCCGGAAGGGAGT+TGG | 0.506625 | 1.4:+75282915 | None:intergenic |
| CCTCTAACCATCAAAACAAA+AGG | 0.508806 | 1.4:+75285353 | None:intergenic |
| GTTAGGATTGCACAAAGTGC+TGG | 0.514958 | 1.4:-75285308 | MS.gene33935:CDS |
| ATGAATTCACCGCGTTCCAT+CGG | 0.515963 | 1.4:-75283093 | MS.gene33935:CDS |
| AATGCTTCAGTAAGTTTCCT+CGG | 0.522483 | 1.4:-75283009 | MS.gene33935:CDS |
| AGGGAGTTGGCAGACGCAAA+TGG | 0.523123 | 1.4:+75282928 | None:intergenic |
| CAATGAAGATGGTGGCATCC+TGG | 0.526957 | 1.4:-75285261 | MS.gene33935:CDS |
| CCTCTTTCGTGTCTTCTATG+AGG | 0.529305 | 1.4:-75283305 | MS.gene33935:CDS |
| AAAGAGGATGCCGCAGATGA+CGG | 0.530793 | 1.4:+75283321 | None:intergenic |
| GGAAGACTTACTGTGACAGC+AGG | 0.533020 | 1.4:+75284241 | None:intergenic |
| TTGCAAGCGTGATGCAAGAA+CGG | 0.539276 | 1.4:-75283394 | MS.gene33935:CDS |
| TACGGCTGAAGCTTAGGGAG+GGG | 0.539291 | 1.4:+75283163 | None:intergenic |
| ATACACTGGTTTAACTAATG+TGG | 0.540905 | 1.4:-75284564 | MS.gene33935:CDS |
| CTTGGACTTGGAATGTGTGC+AGG | 0.544542 | 1.4:+75283033 | None:intergenic |
| TCCTAAGATCCACAGAGCTA+CGG | 0.545254 | 1.4:+75283145 | None:intergenic |
| AAACTCAGCATGGTCTATCA+TGG | 0.545970 | 1.4:-75284516 | MS.gene33935:CDS |
| ATTGCGCTGGAGAGAAACTC+AGG | 0.554269 | 1.4:-75284271 | MS.gene33935:CDS |
| TTAGAGAAGGCTGATTGTAA+GGG | 0.554606 | 1.4:+75283202 | None:intergenic |
| TCAGTGGCAGGAAATTCTGC+TGG | 0.554718 | 1.4:-75284641 | MS.gene33935:intron |
| ATTTCAGCTCCATCGGTCAA+AGG | 0.556014 | 1.4:-75285470 | MS.gene33935:intron |
| GTCATCAACCCCGTCATCTG+CGG | 0.562171 | 1.4:-75283331 | MS.gene33935:CDS |
| GAGTTAAGAGATGATAAAGA+TGG | 0.565530 | 1.4:+75283066 | None:intergenic |
| GAACAATTCAACATTCCGGA+AGG | 0.572328 | 1.4:+75282908 | None:intergenic |
| CACTGCAGACATAGCTAACA+GGG | 0.573295 | 1.4:+75284478 | None:intergenic |
| TCTCCAGAACCTTTGACCGA+TGG | 0.573751 | 1.4:+75285461 | None:intergenic |
| GCAATAATCTTCAAGGCAGA+TGG | 0.580122 | 1.4:+75284289 | None:intergenic |
| TGATAAAGATGGATAACCGA+TGG | 0.589393 | 1.4:+75283077 | None:intergenic |
| CCTCATAGAAGACACGAAAG+AGG | 0.590401 | 1.4:+75283305 | None:intergenic |
| ATTGTCTATGACAATGAAGA+TGG | 0.598093 | 1.4:-75285272 | MS.gene33935:CDS |
| AAGCTTCAGCCGTAGCTCTG+TGG | 0.606819 | 1.4:-75283154 | MS.gene33935:CDS |
| GGTTGATGACAGCAGAGGTG+TGG | 0.607896 | 1.4:+75283344 | None:intergenic |
| GGCATCGCATACGAAGAGAA+AGG | 0.608323 | 1.4:-75284430 | MS.gene33935:CDS |
| GTTTAACTAATGTGGAAACA+TGG | 0.611755 | 1.4:-75284556 | MS.gene33935:CDS |
| AACAATTCAACATTCCGGAA+GGG | 0.612915 | 1.4:+75282909 | None:intergenic |
| AAGGGGTACTTGCTAAAGAG+TGG | 0.614377 | 1.4:+75283220 | None:intergenic |
| AGAGGATGCCGCAGATGACG+GGG | 0.616002 | 1.4:+75283323 | None:intergenic |
| GCTACGGCTGAAGCTTAGGG+AGG | 0.617291 | 1.4:+75283161 | None:intergenic |
| AATATCATCAAACGAGAGAG+TGG | 0.621864 | 1.4:+75286258 | None:intergenic |
| AGAGTTTCATGCTGCCTGTG+TGG | 0.623183 | 1.4:-75283454 | MS.gene33935:CDS |
| AGTTCTGTACATGCATCAAG+AGG | 0.627860 | 1.4:+75285413 | None:intergenic |
| CTACGGCTGAAGCTTAGGGA+GGG | 0.629238 | 1.4:+75283162 | None:intergenic |
| TGACGGTAGGACCTTAGAGA+AGG | 0.630058 | 1.4:+75283189 | None:intergenic |
| GAAATACTAAAGAAATACAC+TGG | 0.632691 | 1.4:-75284578 | MS.gene33935:CDS |
| TGCTGGTATAAGAATACATG+CGG | 0.638072 | 1.4:-75284624 | MS.gene33935:CDS |
| TAGAGAAGGCTGATTGTAAG+GGG | 0.638407 | 1.4:+75283203 | None:intergenic |
| GGTGTGGATTCTGAAGGTGG+TGG | 0.642431 | 1.4:+75283360 | None:intergenic |
| CTCTTCGTATGCGATGCCTG+CGG | 0.646212 | 1.4:+75284435 | None:intergenic |
| ATTGGTCATTACTTGCAACC+AGG | 0.654527 | 1.4:+75285243 | None:intergenic |
| GATGGATAACCGATGGAACG+CGG | 0.656285 | 1.4:+75283084 | None:intergenic |
| CGCAAATGGTGAGAAGCTTG+AGG | 0.656667 | 1.4:+75282942 | None:intergenic |
| AGAGGTGTGGATTCTGAAGG+TGG | 0.668803 | 1.4:+75283357 | None:intergenic |
| GAAGACTTACTGTGACAGCA+GGG | 0.683669 | 1.4:+75284242 | None:intergenic |
| GACGGGGTTGATGACAGCAG+AGG | 0.693540 | 1.4:+75283339 | None:intergenic |
| AGCAGAGGTGTGGATTCTGA+AGG | 0.694144 | 1.4:+75283354 | None:intergenic |
| CCTGCGGACGAAGAAACAAG+TGG | 0.703165 | 1.4:+75284451 | None:intergenic |
| GTCTATGACAATGAAGATGG+TGG | 0.704480 | 1.4:-75285269 | MS.gene33935:CDS |
| GCTGACTCACTATATCGGAG+TGG | 0.710724 | 1.4:+75282964 | None:intergenic |
| GCTGATGACTGGATGAACCG+AGG | 0.715695 | 1.4:+75282992 | None:intergenic |
| TTACGAGAAACAGATTGCGA+CGG | 0.739626 | 1.4:+75283243 | None:intergenic |
| AGTAAGCCAAGAATCCACAC+AGG | 0.748693 | 1.4:+75283440 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATAATCAAATGATTT+TGG | + | chr1.4:75285382-75285401 | None:intergenic | 10.0% |
| !! | AAATTATAATTTCTGATTAG+TGG | - | chr1.4:75284536-75284555 | MS.gene33935:CDS | 15.0% |
| !! | TTTAATCACAAAAATAAATC+CGG | + | chr1.4:75283576-75283595 | None:intergenic | 15.0% |
| !!! | TTGTTATGTCTTTTTTTTTA+TGG | + | chr1.4:75284215-75284234 | None:intergenic | 15.0% |
| !! | AATACACTGAATTTGAAAAA+GGG | + | chr1.4:75285010-75285029 | None:intergenic | 20.0% |
| !! | ACTTATATTAGGTAACATTA+TGG | - | chr1.4:75283322-75283341 | MS.gene33935:CDS | 20.0% |
| !! | CTTTCTTTATTAGATAGAAT+AGG | + | chr1.4:75283133-75283152 | None:intergenic | 20.0% |
| !! | GATAATCCAAATACAATATA+GGG | - | chr1.4:75284382-75284401 | MS.gene33935:CDS | 20.0% |
| !! | GCAATAATGTAAAATCTATA+AGG | - | chr1.4:75284422-75284441 | MS.gene33935:CDS | 20.0% |
| !! | TGATAATCCAAATACAATAT+AGG | - | chr1.4:75284381-75284400 | MS.gene33935:CDS | 20.0% |
| !! | TTCATTATTACAATATCTCT+TGG | - | chr1.4:75284289-75284308 | MS.gene33935:CDS | 20.0% |
| !! | TTTGAAAAAGGGAAAAAAAT+TGG | + | chr1.4:75284999-75285018 | None:intergenic | 20.0% |
| !!! | AAATAATTTCTATTCTGAGA+CGG | - | chr1.4:75285283-75285302 | MS.gene33935:CDS | 20.0% |
| !!! | ATTAAATTTGTGCTTTGTTT+GGG | - | chr1.4:75283590-75283609 | MS.gene33935:intron | 20.0% |
| !!! | TGAAATTATTTTACAGAAGT+TGG | - | chr1.4:75284258-75284277 | MS.gene33935:CDS | 20.0% |
| !!! | TGAATAGGATTTTGATTTTA+TGG | - | chr1.4:75283046-75283065 | MS.gene33935:CDS | 20.0% |
| !!! | TTCTAATTCAATTTTTTTCC+TGG | - | chr1.4:75285721-75285740 | MS.gene33935:intron | 20.0% |
| !!! | TTTTTACCCTATATTGTATT+TGG | + | chr1.4:75284391-75284410 | None:intergenic | 20.0% |
| ! | AAAAAAGAAAGAGAGAGAAA+AGG | - | chr1.4:75283153-75283172 | MS.gene33935:CDS | 25.0% |
| ! | AAAAGGGAAAAAAATTGGAA+TGG | + | chr1.4:75284994-75285013 | None:intergenic | 25.0% |
| ! | AAAGGGAAAAAAATTGGAAT+GGG | + | chr1.4:75284993-75285012 | None:intergenic | 25.0% |
| ! | AATTTATCAGAATATGACTC+AGG | + | chr1.4:75284521-75284540 | None:intergenic | 25.0% |
| ! | ACAAAGAAAAACAAGAAACT+AGG | + | chr1.4:75285577-75285596 | None:intergenic | 25.0% |
| ! | ATAAATCCGGAATTTATCTT+AGG | + | chr1.4:75283563-75283582 | None:intergenic | 25.0% |
| ! | ATGTACTAGTAACTTCAAAA+CGG | + | chr1.4:75285667-75285686 | None:intergenic | 25.0% |
| ! | ATGTTGCTACATAAAACAAT+TGG | + | chr1.4:75283988-75284007 | None:intergenic | 25.0% |
| ! | CAATACACTGAATTTGAAAA+AGG | + | chr1.4:75285011-75285030 | None:intergenic | 25.0% |
| ! | CACAGTTCAAACAAATTAAA+TGG | + | chr1.4:75285456-75285475 | None:intergenic | 25.0% |
| ! | GAAATACTAAAGAAATACAC+TGG | - | chr1.4:75284632-75284651 | MS.gene33935:CDS | 25.0% |
| ! | GATGATATTGAAGCTAATTT+CGG | - | chr1.4:75282966-75282985 | MS.gene33935:CDS | 25.0% |
| ! | TACTGTGTGCAATTTATTAT+TGG | - | chr1.4:75285063-75285082 | MS.gene33935:intron | 25.0% |
| ! | TAGGGTAAAAAATTGAAACT+TGG | - | chr1.4:75284400-75284419 | MS.gene33935:CDS | 25.0% |
| ! | TATAAATGCCAGTTATTATC+TGG | - | chr1.4:75285155-75285174 | MS.gene33935:intron | 25.0% |
| ! | TATAGTATTGCATTTGATTG+TGG | - | chr1.4:75283669-75283688 | MS.gene33935:intron | 25.0% |
| ! | TATATTCCGGAATTTATCTT+AGG | + | chr1.4:75283531-75283550 | None:intergenic | 25.0% |
| ! | TGTGCAATTTATTATTGGAT+TGG | - | chr1.4:75285068-75285087 | MS.gene33935:intron | 25.0% |
| ! | TTATTACAATATCTCTTGGA+AGG | - | chr1.4:75284293-75284312 | MS.gene33935:CDS | 25.0% |
| ! | TTGGTTGTTGTACTTATATT+AGG | - | chr1.4:75283311-75283330 | MS.gene33935:CDS | 25.0% |
| ! | TTTATGGAATTTGTGAGTAT+TGG | - | chr1.4:75283062-75283081 | MS.gene33935:CDS | 25.0% |
| ! | TTTCAAATTCAGTGTATTGT+TGG | - | chr1.4:75285012-75285031 | MS.gene33935:intron | 25.0% |
| !! | AAGTATATGCTTTAAGTCTA+TGG | + | chr1.4:75283502-75283521 | None:intergenic | 25.0% |
| !! | GATTAAATTTGTGCTTTGTT+TGG | - | chr1.4:75283589-75283608 | MS.gene33935:intron | 25.0% |
| !! | TCTAGAATATAACTATAGAG+AGG | + | chr1.4:75283436-75283455 | None:intergenic | 25.0% |
| !!! | CATTTAATTTGTTTGAACTG+TGG | - | chr1.4:75285454-75285473 | MS.gene33935:CDS | 25.0% |
| !!! | TAGTGGTTTTTTAATTTCAG+TGG | - | chr1.4:75284553-75284572 | MS.gene33935:CDS | 25.0% |
| !!! | TTAAATTTGTGCTTTGTTTG+GGG | - | chr1.4:75283591-75283610 | MS.gene33935:intron | 25.0% |
| !!! | TTTGATTTTTACTTCTGCTT+TGG | - | chr1.4:75284871-75284890 | MS.gene33935:intron | 25.0% |
| AAAAAATGCTGACCAAAAAC+AGG | - | chr1.4:75285401-75285420 | MS.gene33935:CDS | 30.0% | |
| AAAAGGATTTGAATTGATGC+TGG | - | chr1.4:75283170-75283189 | MS.gene33935:CDS | 30.0% | |
| AAAGTTAACACCAATGTGTA+AGG | + | chr1.4:75285124-75285143 | None:intergenic | 30.0% | |
| AATATGTCAACAAACAGTTG+AGG | - | chr1.4:75283193-75283212 | MS.gene33935:CDS | 30.0% | |
| AATTTGTGTTTCCTTTGTGA+TGG | - | chr1.4:75283455-75283474 | MS.gene33935:CDS | 30.0% | |
| AGAAAAACAAGAAACTAGGA+AGG | + | chr1.4:75285573-75285592 | None:intergenic | 30.0% | |
| ATTCATGTTAACAAAGAGAC+AGG | + | chr1.4:75283712-75283731 | None:intergenic | 30.0% | |
| ATTGTCTATGACAATGAAGA+TGG | - | chr1.4:75283938-75283957 | MS.gene33935:intron | 30.0% | |
| GAAATCAATCCAACAAGAAA+TGG | + | chr1.4:75284458-75284477 | None:intergenic | 30.0% | |
| GACTAAACTGATGATATACT+GGG | + | chr1.4:75285522-75285541 | None:intergenic | 30.0% | |
| GAGTTAAGAGATGATAAAGA+TGG | + | chr1.4:75286147-75286166 | None:intergenic | 30.0% | |
| GCAGAAGTAAAAATCAAACT+TGG | + | chr1.4:75284869-75284888 | None:intergenic | 30.0% | |
| GGTATTTGTTTCAAAAGCTT+CGG | - | chr1.4:75284607-75284626 | MS.gene33935:CDS | 30.0% | |
| GTATTTGTTTCAAAAGCTTC+GGG | - | chr1.4:75284608-75284627 | MS.gene33935:CDS | 30.0% | |
| GTTTAACTAATGTGGAAACA+TGG | - | chr1.4:75284654-75284673 | MS.gene33935:intron | 30.0% | |
| TCATCTTCAGCAATACAAAT+TGG | - | chr1.4:75285940-75285959 | MS.gene33935:intron | 30.0% | |
| TCTCGTATTGTTAAAGAACA+AGG | + | chr1.4:75285491-75285510 | None:intergenic | 30.0% | |
| TGTACTAGTAACTTCAAAAC+GGG | + | chr1.4:75285666-75285685 | None:intergenic | 30.0% | |
| TGTCTCTTTGTTAACATGAA+TGG | - | chr1.4:75283711-75283730 | MS.gene33935:intron | 30.0% | |
| ! | AGTATTGGAAATTCTTACAC+TGG | - | chr1.4:75283077-75283096 | MS.gene33935:CDS | 30.0% |
| ! | GCAAAAACGTTTCTAGATAA+TGG | + | chr1.4:75284141-75284160 | None:intergenic | 30.0% |
| ! | TGATTTCAGCTAGTTTGAAT+AGG | - | chr1.4:75283031-75283050 | MS.gene33935:CDS | 30.0% |
| !! | ATACACTGGTTTAACTAATG+TGG | - | chr1.4:75284646-75284665 | MS.gene33935:intron | 30.0% |
| !!! | CTTTTGTTTTGATGGTTAGA+GGG | - | chr1.4:75283858-75283877 | MS.gene33935:intron | 30.0% |
| !!! | TAGTTCACCTTTTGTTTTGA+TGG | - | chr1.4:75283850-75283869 | MS.gene33935:intron | 30.0% |
| !!! | TTGTTTTTTGCCTTCGAATT+TGG | - | chr1.4:75282995-75283014 | MS.gene33935:CDS | 30.0% |
| !!! | TTTTGTTTTGATGGTTAGAG+GGG | - | chr1.4:75283859-75283878 | MS.gene33935:intron | 30.0% |
| AAATGCTAATGTGAGTTGTC+TGG | - | chr1.4:75284069-75284088 | MS.gene33935:intron | 35.0% | |
| AAATGGAACATGAGTGTACT+AGG | + | chr1.4:75285439-75285458 | None:intergenic | 35.0% | |
| AACACAGAATCCAAATTCGA+AGG | + | chr1.4:75283008-75283027 | None:intergenic | 35.0% | |
| AATATCATCAAACGAGAGAG+TGG | + | chr1.4:75282955-75282974 | None:intergenic | 35.0% | |
| AATGCTTCAGTAAGTTTCCT+CGG | - | chr1.4:75286201-75286220 | MS.gene33935:intron | 35.0% | |
| ACAATAAAACCAACGAGACA+CGG | + | chr1.4:75285238-75285257 | None:intergenic | 35.0% | |
| ATGAGAATGTCTTTGTCATG+AGG | - | chr1.4:75285181-75285200 | MS.gene33935:intron | 35.0% | |
| CAACAAGAAATGGTCATCAA+TGG | + | chr1.4:75284448-75284467 | None:intergenic | 35.0% | |
| CATATGAAAGCCTTACACAT+TGG | - | chr1.4:75285111-75285130 | MS.gene33935:intron | 35.0% | |
| CCTCTAACCATCAAAACAAA+AGG | + | chr1.4:75283860-75283879 | None:intergenic | 35.0% | |
| CTCATTTGCCAGATAATAAC+TGG | + | chr1.4:75285166-75285185 | None:intergenic | 35.0% | |
| CTCTTGGAAGGAAAATATCA+GGG | - | chr1.4:75284305-75284324 | MS.gene33935:CDS | 35.0% | |
| GAAACAACATATCAATAGCC+AGG | + | chr1.4:75285621-75285640 | None:intergenic | 35.0% | |
| GCCATTCCTAAGATAAATTC+CGG | - | chr1.4:75283522-75283541 | MS.gene33935:intron | 35.0% | |
| GCTTTCATATGTCTCAACAA+AGG | + | chr1.4:75285102-75285121 | None:intergenic | 35.0% | |
| GGACTAAACTGATGATATAC+TGG | + | chr1.4:75285523-75285542 | None:intergenic | 35.0% | |
| GTGCATATTGAACAACATTC+TGG | - | chr1.4:75284345-75284364 | MS.gene33935:CDS | 35.0% | |
| TAGGAATGGCAAGTATATTC+CGG | + | chr1.4:75283544-75283563 | None:intergenic | 35.0% | |
| TCCGGAATTTATCTTAGGAA+TGG | + | chr1.4:75283526-75283545 | None:intergenic | 35.0% | |
| TCTCATGTTCGTGAATTTCA+TGG | - | chr1.4:75284815-75284834 | MS.gene33935:intron | 35.0% | |
| TCTCTTGGAAGGAAAATATC+AGG | - | chr1.4:75284304-75284323 | MS.gene33935:CDS | 35.0% | |
| TGATAAAGATGGATAACCGA+TGG | + | chr1.4:75286136-75286155 | None:intergenic | 35.0% | |
| TGCTGGTATAAGAATACATG+CGG | - | chr1.4:75284586-75284605 | MS.gene33935:CDS | 35.0% | |
| TTAGAGAAGGCTGATTGTAA+GGG | + | chr1.4:75286011-75286030 | None:intergenic | 35.0% | |
| TTCATCAGGGATAAAGGTAA+TGG | + | chr1.4:75285544-75285563 | None:intergenic | 35.0% | |
| ! | CATGCTGAGTTTTCAAAAGT+TGG | + | chr1.4:75284686-75284705 | None:intergenic | 35.0% |
| ! | CATTGATGACCATTTCTTGT+TGG | - | chr1.4:75284446-75284465 | MS.gene33935:CDS | 35.0% |
| !! | AAACTTACTGAAGCATTGCT+TGG | + | chr1.4:75286198-75286217 | None:intergenic | 35.0% |
| !! | AAAGTTTTATCCCGGTAAGT+GGG | + | chr1.4:75283293-75283312 | None:intergenic | 35.0% |
| !! | CAACAACCAAAGTTTTATCC+CGG | + | chr1.4:75283301-75283320 | None:intergenic | 35.0% |
| !! | CAACTTTTGAAAACTCAGCA+TGG | - | chr1.4:75284684-75284703 | MS.gene33935:intron | 35.0% |
| !! | TCTTACACTGGTAGTGTTTT+TGG | - | chr1.4:75283089-75283108 | MS.gene33935:CDS | 35.0% |
| !!! | CCTTTTGTTTTGATGGTTAG+AGG | - | chr1.4:75283857-75283876 | MS.gene33935:intron | 35.0% |
| !!! | GGTTTTTTAATTTCAGTGGC+AGG | - | chr1.4:75284557-75284576 | MS.gene33935:CDS | 35.0% |
| !!! | TTTGTTTTGATGGTTAGAGG+GGG | - | chr1.4:75283860-75283879 | MS.gene33935:intron | 35.0% |
| AAACTCAGCATGGTCTATCA+TGG | - | chr1.4:75284694-75284713 | MS.gene33935:intron | 40.0% | |
| AACAACATTCTGGACAAGCT+TGG | - | chr1.4:75284355-75284374 | MS.gene33935:CDS | 40.0% | |
| AGTTCTGTACATGCATCAAG+AGG | + | chr1.4:75283800-75283819 | None:intergenic | 40.0% | |
| ATTGGTCATTACTTGCAACC+AGG | + | chr1.4:75283970-75283989 | None:intergenic | 40.0% | |
| CACTTACCGGGATAAAACTT+TGG | - | chr1.4:75283292-75283311 | MS.gene33935:CDS | 40.0% | |
| CCTCATTTCATCAGGGATAA+AGG | + | chr1.4:75285550-75285569 | None:intergenic | 40.0% | |
| CCTTTATCCCTGATGAAATG+AGG | - | chr1.4:75285547-75285566 | MS.gene33935:intron | 40.0% | |
| CGAACATGAGAAGAAGTTTG+AGG | + | chr1.4:75284806-75284825 | None:intergenic | 40.0% | |
| CTTACAATCAGCCTTCTCTA+AGG | - | chr1.4:75286010-75286029 | MS.gene33935:intron | 40.0% | |
| CTTAGAGAAGGCTGATTGTA+AGG | + | chr1.4:75286012-75286031 | None:intergenic | 40.0% | |
| GCAATAATCTTCAAGGCAGA+TGG | + | chr1.4:75284924-75284943 | None:intergenic | 40.0% | |
| GTCTATGACAATGAAGATGG+TGG | - | chr1.4:75283941-75283960 | MS.gene33935:intron | 40.0% | |
| GTGTGAAGCTAGAGATCTTT+GGG | + | chr1.4:75286097-75286116 | None:intergenic | 40.0% | |
| TACTTACCGGGATAAGACTT+TGG | - | chr1.4:75283371-75283390 | MS.gene33935:CDS | 40.0% | |
| TAGAGAAGGCTGATTGTAAG+GGG | + | chr1.4:75286010-75286029 | None:intergenic | 40.0% | |
| TCGGCTACATGGATCAAATT+AGG | + | chr1.4:75283348-75283367 | None:intergenic | 40.0% | |
| TGGATTCTTGGCTTACTTCA+TGG | - | chr1.4:75285776-75285795 | MS.gene33935:intron | 40.0% | |
| TGTGTGAAGCTAGAGATCTT+TGG | + | chr1.4:75286098-75286117 | None:intergenic | 40.0% | |
| TGTTTCCTTTGTGATGGTTG+TGG | - | chr1.4:75283461-75283480 | MS.gene33935:intron | 40.0% | |
| TTACGAGAAACAGATTGCGA+CGG | + | chr1.4:75285970-75285989 | None:intergenic | 40.0% | |
| ! | AAAGTCTTATCCCGGTAAGT+AGG | + | chr1.4:75283372-75283391 | None:intergenic | 40.0% |
| ! | AAGTCTTATCCCGGTAAGTA+GGG | + | chr1.4:75283371-75283390 | None:intergenic | 40.0% |
| ! | ACCAAAAACAGGTTTGCTTG+AGG | - | chr1.4:75285412-75285431 | MS.gene33935:CDS | 40.0% |
| ! | CAACAACCAAAGTCTTATCC+CGG | + | chr1.4:75283380-75283399 | None:intergenic | 40.0% |
| ! | TCCTCAAGCAAACCTGTTTT+TGG | + | chr1.4:75285416-75285435 | None:intergenic | 40.0% |
| ! | TTGAGGCTGACTCACTATAT+CGG | + | chr1.4:75286254-75286273 | None:intergenic | 40.0% |
| !! | AAGTTTTATCCCGGTAAGTG+GGG | + | chr1.4:75283292-75283311 | None:intergenic | 40.0% |
| !! | AGAATACGGAGCCTTATTCT+TGG | - | chr1.4:75283769-75283788 | MS.gene33935:intron | 40.0% |
| !! | CAAAGTTTTATCCCGGTAAG+TGG | + | chr1.4:75283294-75283313 | None:intergenic | 40.0% |
| !! | CTGCTAAGGTTGTGTTGATT+GGG | - | chr1.4:75282922-75282941 | MS.gene33935:CDS | 40.0% |
| !! | GTAGCTTTGAGGAAAAGGTT+AGG | - | chr1.4:75283885-75283904 | MS.gene33935:intron | 40.0% |
| !! | GTCAAAGGTTCTGGAGAATA+CGG | - | chr1.4:75283755-75283774 | MS.gene33935:intron | 40.0% |
| !! | TGCTTTGTTTGGGGAAAAGA+TGG | - | chr1.4:75283600-75283619 | MS.gene33935:intron | 40.0% |
| !!! | GCTTTTGATTTCAGCTCCAT+CGG | - | chr1.4:75283733-75283752 | MS.gene33935:intron | 40.0% |
| !!! | TTGTTTTGATGGTTAGAGGG+GGG | - | chr1.4:75283861-75283880 | MS.gene33935:intron | 40.0% |
| AACTCTGTCAATAAGTCGCC+AGG | + | chr1.4:75285742-75285761 | None:intergenic | 45.0% | |
| AAGAGGCTCTGCCAAGAATA+AGG | + | chr1.4:75283783-75283802 | None:intergenic | 45.0% | |
| AGGAAGGCCTCATTTCATCA+GGG | + | chr1.4:75285557-75285576 | None:intergenic | 45.0% | |
| AGTAAGCCAAGAATCCACAC+AGG | + | chr1.4:75285773-75285792 | None:intergenic | 45.0% | |
| ATGAATTCACCGCGTTCCAT+CGG | - | chr1.4:75286117-75286136 | MS.gene33935:intron | 45.0% | |
| ATTTCAGCTCCATCGGTCAA+AGG | - | chr1.4:75283740-75283759 | MS.gene33935:intron | 45.0% | |
| CACTGCAGACATAGCTAACA+GGG | + | chr1.4:75284735-75284754 | None:intergenic | 45.0% | |
| CCTCATAGAAGACACGAAAG+AGG | + | chr1.4:75285908-75285927 | None:intergenic | 45.0% | |
| CCTCTTTCGTGTCTTCTATG+AGG | - | chr1.4:75285905-75285924 | MS.gene33935:intron | 45.0% | |
| CTCCAGCGCAATAATCTTCA+AGG | + | chr1.4:75284931-75284950 | None:intergenic | 45.0% | |
| CTTTGTCATGAGGCAGGTTA+TGG | - | chr1.4:75285191-75285210 | MS.gene33935:intron | 45.0% | |
| GAAGACTTACTGTGACAGCA+GGG | + | chr1.4:75284971-75284990 | None:intergenic | 45.0% | |
| GAATGTCTTTGTCATGAGGC+AGG | - | chr1.4:75285185-75285204 | MS.gene33935:intron | 45.0% | |
| GAGTTGTCTGGTACACTAAC+TGG | - | chr1.4:75284081-75284100 | MS.gene33935:intron | 45.0% | |
| GTTAGGATTGCACAAAGTGC+TGG | - | chr1.4:75283902-75283921 | MS.gene33935:intron | 45.0% | |
| TAGGAAGGCCTCATTTCATC+AGG | + | chr1.4:75285558-75285577 | None:intergenic | 45.0% | |
| TCCTAAGATCCACAGAGCTA+CGG | + | chr1.4:75286068-75286087 | None:intergenic | 45.0% | |
| TCTGGTACACTAACTGGTTG+TGG | - | chr1.4:75284087-75284106 | MS.gene33935:intron | 45.0% | |
| TGCCTTGAAGATTATTGCGC+TGG | - | chr1.4:75284926-75284945 | MS.gene33935:intron | 45.0% | |
| TTCCTTTGTGATGGTTGTGG+TGG | - | chr1.4:75283464-75283483 | MS.gene33935:intron | 45.0% | |
| TTGCAAGCGTGATGCAAGAA+CGG | - | chr1.4:75285816-75285835 | MS.gene33935:intron | 45.0% | |
| TTGCATCACGCTTGCAAACT+GGG | + | chr1.4:75285813-75285832 | None:intergenic | 45.0% | |
| ! | GCTGCTAAGGTTGTGTTGAT+TGG | - | chr1.4:75282921-75282940 | MS.gene33935:CDS | 45.0% |
| !! | AAGGGGTACTTGCTAAAGAG+TGG | + | chr1.4:75285993-75286012 | None:intergenic | 45.0% |
| !! | ACTGAAGCATTGCTTGGACT+TGG | + | chr1.4:75286192-75286211 | None:intergenic | 45.0% |
| !! | CAGGTTATGGCTATTTTCCC+AGG | - | chr1.4:75285204-75285223 | MS.gene33935:intron | 45.0% |
| !! | CGATTTTGCTATACGCTTCC+TGG | - | chr1.4:75285600-75285619 | MS.gene33935:intron | 45.0% |
| !! | GGCTATTTTCCCAGGATTTC+CGG | - | chr1.4:75285212-75285231 | MS.gene33935:intron | 45.0% |
| !!! | TGGTAGTGTTTTTGGCACAC+TGG | - | chr1.4:75283097-75283116 | MS.gene33935:CDS | 45.0% |
| !! | AAATTATTTAAAAAAATTCA+TGG | + | chr1.4:75285272-75285291 | None:intergenic | 5.0% |
| AAAGAGGATGCCGCAGATGA+CGG | + | chr1.4:75285892-75285911 | None:intergenic | 50.0% | |
| ACGCTTGCAAACTGGGCAAA+AGG | + | chr1.4:75285806-75285825 | None:intergenic | 50.0% | |
| AGAGCTACGGCTGAAGCTTA+GGG | + | chr1.4:75286055-75286074 | None:intergenic | 50.0% | |
| AGAGTTTCATGCTGCCTGTG+TGG | - | chr1.4:75285756-75285775 | MS.gene33935:intron | 50.0% | |
| ATGCTGCCTGTGTGGATTCT+TGG | - | chr1.4:75285764-75285783 | MS.gene33935:intron | 50.0% | |
| ATGTAGCCGACCCTACTTAC+CGG | - | chr1.4:75283358-75283377 | MS.gene33935:CDS | 50.0% | |
| ATTGCGCTGGAGAGAAACTC+AGG | - | chr1.4:75284939-75284958 | MS.gene33935:intron | 50.0% | |
| CACCACCACAACCATCACAA+AGG | + | chr1.4:75283469-75283488 | None:intergenic | 50.0% | |
| CAGTTGAGGCATGCAAAGCA+TGG | - | chr1.4:75283207-75283226 | MS.gene33935:CDS | 50.0% | |
| CGCAAATGGTGAGAAGCTTG+AGG | + | chr1.4:75286271-75286290 | None:intergenic | 50.0% | |
| CTTATCCCGGTAAGTAGGGT+CGG | + | chr1.4:75283367-75283386 | None:intergenic | 50.0% | |
| CTTGCATCACGCTTGCAAAC+TGG | + | chr1.4:75285814-75285833 | None:intergenic | 50.0% | |
| CTTGGACTTGGAATGTGTGC+AGG | + | chr1.4:75286180-75286199 | None:intergenic | 50.0% | |
| GATGGATAACCGATGGAACG+CGG | + | chr1.4:75286129-75286148 | None:intergenic | 50.0% | |
| GCACTGCAGACATAGCTAAC+AGG | + | chr1.4:75284736-75284755 | None:intergenic | 50.0% | |
| GGAAGACTTACTGTGACAGC+AGG | + | chr1.4:75284972-75284991 | None:intergenic | 50.0% | |
| GGCATCGCATACGAAGAGAA+AGG | - | chr1.4:75284780-75284799 | MS.gene33935:intron | 50.0% | |
| GTTAGCTATGTCTGCAGTGC+TGG | - | chr1.4:75284736-75284755 | MS.gene33935:intron | 50.0% | |
| TAAAACCAACGAGACACGGC+CGG | + | chr1.4:75285234-75285253 | None:intergenic | 50.0% | |
| TCAACATTCCGGAAGGGAGT+TGG | + | chr1.4:75286298-75286317 | None:intergenic | 50.0% | |
| TCAGTGGCAGGAAATTCTGC+TGG | - | chr1.4:75284569-75284588 | MS.gene33935:CDS | 50.0% | |
| TCTCCAGAACCTTTGACCGA+TGG | + | chr1.4:75283752-75283771 | None:intergenic | 50.0% | |
| TGACGGTAGGACCTTAGAGA+AGG | + | chr1.4:75286024-75286043 | None:intergenic | 50.0% | |
| TGCAAGCGTGATGCAAGAAC+GGG | - | chr1.4:75285817-75285836 | MS.gene33935:intron | 50.0% | |
| TTTATCCCGGTAAGTGGGGT+CGG | + | chr1.4:75283288-75283307 | None:intergenic | 50.0% | |
| ! | AGAGGTGTGGATTCTGAAGG+TGG | + | chr1.4:75285856-75285875 | None:intergenic | 50.0% |
| ! | AGCAGAGGTGTGGATTCTGA+AGG | + | chr1.4:75285859-75285878 | None:intergenic | 50.0% |
| ! | CAATGAAGATGGTGGCATCC+TGG | - | chr1.4:75283949-75283968 | MS.gene33935:intron | 50.0% |
| ! | GCTGACTCACTATATCGGAG+TGG | + | chr1.4:75286249-75286268 | None:intergenic | 50.0% |
| !! | CAGGGTTCTAGCTTAGCATG+TGG | - | chr1.4:75284323-75284342 | MS.gene33935:CDS | 50.0% |
| !! | GGGGTGTAGCTTTGAGGAAA+AGG | - | chr1.4:75283880-75283899 | MS.gene33935:intron | 50.0% |
| AAGAGGATGCCGCAGATGAC+GGG | + | chr1.4:75285891-75285910 | None:intergenic | 55.0% | |
| AGCTTAGGGAGGGGGATTGA+CGG | + | chr1.4:75286041-75286060 | None:intergenic | 55.0% | |
| AGGGAGTTGGCAGACGCAAA+TGG | + | chr1.4:75286285-75286304 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAC+CGG | - | chr1.4:75283279-75283298 | MS.gene33935:CDS | 55.0% | |
| CAGAGCTACGGCTGAAGCTT+AGG | + | chr1.4:75286056-75286075 | None:intergenic | 55.0% | |
| CCTGCGGACGAAGAAACAAG+TGG | + | chr1.4:75284762-75284781 | None:intergenic | 55.0% | |
| CTACGGCTGAAGCTTAGGGA+GGG | + | chr1.4:75286051-75286070 | None:intergenic | 55.0% | |
| CTCTTCGTATGCGATGCCTG+CGG | + | chr1.4:75284778-75284797 | None:intergenic | 55.0% | |
| GAGTGGATGCTGCTGATGAC+TGG | + | chr1.4:75286232-75286251 | None:intergenic | 55.0% | |
| GCTCCATCGGTCAAAGGTTC+TGG | - | chr1.4:75283746-75283765 | MS.gene33935:intron | 55.0% | |
| GCTGATGACTGGATGAACCG+AGG | + | chr1.4:75286221-75286240 | None:intergenic | 55.0% | |
| GGTAAGTAGGGTCGGCTACA+TGG | + | chr1.4:75283359-75283378 | None:intergenic | 55.0% | |
| GTCATCAACCCCGTCATCTG+CGG | - | chr1.4:75285879-75285898 | MS.gene33935:intron | 55.0% | |
| TACGGCTGAAGCTTAGGGAG+GGG | + | chr1.4:75286050-75286069 | None:intergenic | 55.0% | |
| TGTAGCCGACCCTACTTACC+GGG | - | chr1.4:75283359-75283378 | MS.gene33935:CDS | 55.0% | |
| ! | AAGCTTCAGCCGTAGCTCTG+TGG | - | chr1.4:75286056-75286075 | MS.gene33935:intron | 55.0% |
| ! | CCACTTGTTTCTTCGTCCGC+AGG | - | chr1.4:75284759-75284778 | MS.gene33935:intron | 55.0% |
| ! | GCCGTAGCTCTGTGGATCTT+AGG | - | chr1.4:75286064-75286083 | MS.gene33935:intron | 55.0% |
| ! | GGTGTGGATTCTGAAGGTGG+TGG | + | chr1.4:75285853-75285872 | None:intergenic | 55.0% |
| ! | TAGAGGGGGGTGTAGCTTTG+AGG | - | chr1.4:75283874-75283893 | MS.gene33935:intron | 55.0% |
| !! | GGTTGATGACAGCAGAGGTG+TGG | + | chr1.4:75285869-75285888 | None:intergenic | 55.0% |
| ACGGCTGAAGCTTAGGGAGG+GGG | + | chr1.4:75286049-75286068 | None:intergenic | 60.0% | |
| AGAGGATGCCGCAGATGACG+GGG | + | chr1.4:75285890-75285909 | None:intergenic | 60.0% | |
| GAGACACGGCCGGAAATCCT+GGG | + | chr1.4:75285224-75285243 | None:intergenic | 60.0% | |
| GATTTCCGGCCGTGTCTCGT+TGG | - | chr1.4:75285226-75285245 | MS.gene33935:intron | 60.0% | |
| GCGTGATGCAAGAACGGGTC+TGG | - | chr1.4:75285822-75285841 | MS.gene33935:intron | 60.0% | |
| GCTACGGCTGAAGCTTAGGG+AGG | + | chr1.4:75286052-75286071 | None:intergenic | 60.0% | |
| GGTAAGTGGGGTCGGCTACA+TGG | + | chr1.4:75283280-75283299 | None:intergenic | 60.0% | |
| TAGGGAGGGGGATTGACGGT+AGG | + | chr1.4:75286037-75286056 | None:intergenic | 60.0% | |
| TGCGTCTGCCAACTCCCTTC+CGG | - | chr1.4:75286287-75286306 | MS.gene33935:CDS | 60.0% | |
| TGTAGCCGACCCCACTTACC+GGG | - | chr1.4:75283280-75283299 | MS.gene33935:CDS | 60.0% | |
| !! | GACGGGGTTGATGACAGCAG+AGG | + | chr1.4:75285874-75285893 | None:intergenic | 60.0% |
| CGAGACACGGCCGGAAATCC+TGG | + | chr1.4:75285225-75285244 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 75282915 | 75286317 | 75282915 | ID=MS.gene33935 |
| chr1.4 | mRNA | 75282915 | 75286317 | 75282915 | ID=MS.gene33935.t1;Parent=MS.gene33935 |
| chr1.4 | exon | 75286245 | 75286317 | 75286245 | ID=MS.gene33935.t1.exon1;Parent=MS.gene33935.t1 |
| chr1.4 | CDS | 75286245 | 75286317 | 75286245 | ID=cds.MS.gene33935.t1;Parent=MS.gene33935.t1 |
| chr1.4 | exon | 75285255 | 75285485 | 75285255 | ID=MS.gene33935.t1.exon2;Parent=MS.gene33935.t1 |
| chr1.4 | CDS | 75285255 | 75285485 | 75285255 | ID=cds.MS.gene33935.t1;Parent=MS.gene33935.t1 |
| chr1.4 | exon | 75284252 | 75284659 | 75284252 | ID=MS.gene33935.t1.exon3;Parent=MS.gene33935.t1 |
| chr1.4 | CDS | 75284252 | 75284659 | 75284252 | ID=cds.MS.gene33935.t1;Parent=MS.gene33935.t1 |
| chr1.4 | exon | 75282915 | 75283474 | 75282915 | ID=MS.gene33935.t1.exon4;Parent=MS.gene33935.t1 |
| chr1.4 | CDS | 75282915 | 75283474 | 75282915 | ID=cds.MS.gene33935.t1;Parent=MS.gene33935.t1 |
| Gene Sequence |
| Protein sequence |
