Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35436.t1 | XP_003596850.2 | 95.9 | 533 | 20 | 1 | 1 | 533 | 1 | 531 | 1.60E-255 | 891.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35436.t1 | Q3U2S4 | 39.6 | 283 | 161 | 3 | 201 | 478 | 164 | 441 | 8.4e-51 | 203.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35436.t1 | G7IHG3 | 95.9 | 533 | 20 | 1 | 1 | 533 | 1 | 531 | 1.2e-255 | 891.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049368 | MS.gene35436 | 0.810194 | 1.30E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene35436 | 0.805646 | 1.21E-49 | -1.69E-46 |
| MS.gene050084 | MS.gene35436 | 0.841305 | 5.15E-58 | -1.69E-46 |
| MS.gene050085 | MS.gene35436 | 0.867251 | 1.57E-65 | -1.69E-46 |
| MS.gene050317 | MS.gene35436 | 0.818829 | 1.60E-52 | -1.69E-46 |
| MS.gene050384 | MS.gene35436 | 0.815854 | 7.47E-52 | -1.69E-46 |
| MS.gene050386 | MS.gene35436 | 0.830436 | 2.94E-55 | -1.69E-46 |
| MS.gene050646 | MS.gene35436 | 0.815027 | 1.14E-51 | -1.69E-46 |
| MS.gene050654 | MS.gene35436 | 0.836218 | 1.06E-56 | -1.69E-46 |
| MS.gene050689 | MS.gene35436 | 0.802338 | 5.88E-49 | -1.69E-46 |
| MS.gene050941 | MS.gene35436 | 0.807639 | 4.58E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene35436 | 0.809156 | 2.18E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene35436 | 0.815108 | 1.09E-51 | -1.69E-46 |
| MS.gene051365 | MS.gene35436 | 0.808773 | 2.63E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene35436 | 0.818689 | 1.72E-52 | -1.69E-46 |
| MS.gene051902 | MS.gene35436 | 0.812633 | 3.84E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene35436 | 0.802853 | 4.61E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene35436 | 0.831845 | 1.33E-55 | -1.69E-46 |
| MS.gene052342 | MS.gene35436 | 0.822198 | 2.69E-53 | -1.69E-46 |
| MS.gene052434 | MS.gene35436 | 0.812647 | 3.82E-51 | -1.69E-46 |
| MS.gene053058 | MS.gene35436 | 0.808751 | 2.66E-50 | -1.69E-46 |
| MS.gene054823 | MS.gene35436 | 0.803272 | 3.77E-49 | -1.69E-46 |
| MS.gene055311 | MS.gene35436 | 0.82015 | 7.99E-53 | -1.69E-46 |
| MS.gene055313 | MS.gene35436 | 0.80231 | 5.96E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene35436 | 0.808149 | 3.57E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene35436 | 0.829821 | 4.15E-55 | -1.69E-46 |
| MS.gene056787 | MS.gene35436 | 0.814483 | 1.51E-51 | -1.69E-46 |
| MS.gene056849 | MS.gene35436 | 0.808112 | 3.64E-50 | -1.69E-46 |
| MS.gene057108 | MS.gene35436 | 0.829544 | 4.85E-55 | -1.69E-46 |
| MS.gene057109 | MS.gene35436 | 0.826051 | 3.35E-54 | -1.69E-46 |
| MS.gene057110 | MS.gene35436 | 0.826802 | 2.22E-54 | -1.69E-46 |
| MS.gene05781 | MS.gene35436 | 0.80585 | 1.09E-49 | -1.69E-46 |
| MS.gene058054 | MS.gene35436 | 0.808856 | 2.52E-50 | -1.69E-46 |
| MS.gene058292 | MS.gene35436 | 0.824258 | 8.90E-54 | -1.69E-46 |
| MS.gene058646 | MS.gene35436 | 0.806939 | 6.45E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene35436 | 0.818755 | 1.66E-52 | -1.69E-46 |
| MS.gene06010 | MS.gene35436 | 0.817917 | 2.57E-52 | -1.69E-46 |
| MS.gene060296 | MS.gene35436 | 0.805692 | 1.18E-49 | -1.69E-46 |
| MS.gene060763 | MS.gene35436 | 0.808644 | 2.80E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene35436 | 0.82935 | 5.41E-55 | -1.69E-46 |
| MS.gene060935 | MS.gene35436 | 0.838521 | 2.74E-57 | -1.69E-46 |
| MS.gene060937 | MS.gene35436 | 0.845562 | 3.76E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35436.t1 | MTR_2g086780 | 96.248 | 533 | 18 | 1 | 1 | 533 | 1 | 531 | 0.0 | 1048 |
| MS.gene35436.t1 | MTR_4g094860 | 34.127 | 126 | 76 | 3 | 244 | 365 | 40 | 162 | 3.47e-14 | 74.7 |
| MS.gene35436.t1 | MTR_4g094860 | 34.127 | 126 | 76 | 3 | 244 | 365 | 40 | 162 | 7.46e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35436.t1 | AT2G27350 | 67.447 | 427 | 133 | 4 | 111 | 533 | 81 | 505 | 0.0 | 526 |
| MS.gene35436.t1 | AT2G27350 | 67.447 | 427 | 133 | 4 | 111 | 533 | 81 | 505 | 0.0 | 526 |
| MS.gene35436.t1 | AT2G27350 | 67.056 | 428 | 134 | 5 | 111 | 533 | 81 | 506 | 0.0 | 519 |
| MS.gene35436.t1 | AT2G27350 | 67.056 | 428 | 134 | 5 | 111 | 533 | 81 | 506 | 0.0 | 519 |
| MS.gene35436.t1 | AT2G27350 | 67.056 | 428 | 134 | 5 | 111 | 533 | 81 | 506 | 0.0 | 519 |
| MS.gene35436.t1 | AT2G27350 | 67.056 | 428 | 134 | 5 | 111 | 533 | 81 | 506 | 0.0 | 519 |
| MS.gene35436.t1 | AT5G67170 | 33.094 | 139 | 83 | 3 | 244 | 373 | 36 | 173 | 2.08e-16 | 81.6 |
| MS.gene35436.t1 | AT5G67170 | 33.094 | 139 | 83 | 3 | 244 | 373 | 36 | 173 | 2.08e-16 | 81.6 |
Find 163 sgRNAs with CRISPR-Local
Find 420 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCCTTTCTGGCAGGTTTA+TGG | 0.130034 | 2.1:-15458842 | MS.gene35436:intron |
| ATTGAGGCATACAGCATATT+TGG | 0.176533 | 2.1:-15457654 | MS.gene35436:CDS |
| AAATGAAGACTTTCCATTAA+AGG | 0.214610 | 2.1:+15462958 | None:intergenic |
| ATTGATATTAGAAGGGTAAA+AGG | 0.272382 | 2.1:-15461910 | MS.gene35436:CDS |
| TTCTTTCCCACTTTCCATCC+TGG | 0.297988 | 2.1:+15457743 | None:intergenic |
| ACCCTTTCTGGCAGGTTTAT+GGG | 0.298664 | 2.1:-15458841 | MS.gene35436:intron |
| CCCACAATTGGTGCAGGACT+TGG | 0.302410 | 2.1:-15458562 | MS.gene35436:CDS |
| AATGAAGACTTTCCATTAAA+GGG | 0.311292 | 2.1:+15462959 | None:intergenic |
| TTGAGGCATACAGCATATTT+GGG | 0.322519 | 2.1:-15457653 | MS.gene35436:CDS |
| GCACGATTAGGGTTAGGGTT+AGG | 0.323331 | 2.1:+15463129 | None:intergenic |
| AATGATACGCATACTCCTTT+AGG | 0.333180 | 2.1:-15462928 | MS.gene35436:CDS |
| TACTTGCATTATCGATTTGT+TGG | 0.335697 | 2.1:+15458214 | None:intergenic |
| AGTTTGAAATTGATATTAGA+AGG | 0.344316 | 2.1:-15461918 | MS.gene35436:CDS |
| TTCTATGATTTGTTACTTGT+TGG | 0.348240 | 2.1:-15457619 | MS.gene35436:CDS |
| GCAGATGAGCGTAGATTATA+TGG | 0.348920 | 2.1:-15461791 | MS.gene35436:intron |
| CACGATTAGGGTTAGGGTTA+GGG | 0.352773 | 2.1:+15463130 | None:intergenic |
| GAGCCTATCAATACATTTCA+TGG | 0.353732 | 2.1:-15458667 | MS.gene35436:CDS |
| GGACTCAGAATTGTATGATT+TGG | 0.360597 | 2.1:-15461818 | MS.gene35436:CDS |
| AGTATGCTGGGAGTAGTAAT+AGG | 0.363405 | 2.1:-15462996 | MS.gene35436:CDS |
| AAAGAGTGATGACCCTTTAA+TGG | 0.366219 | 2.1:-15462971 | MS.gene35436:CDS |
| GAAAGTGGAGAGGAGGAGCT+TGG | 0.377608 | 2.1:-15463045 | MS.gene35436:CDS |
| TCGGCTAGGACTTCGCCTGC+TGG | 0.378489 | 2.1:-15462631 | MS.gene35436:CDS |
| GACCCACGGCGTCCCACAAT+TGG | 0.381817 | 2.1:-15458574 | MS.gene35436:CDS |
| GGTGGAACAGGTGGAGGTGG+AGG | 0.383817 | 2.1:+15462763 | None:intergenic |
| TTGCCGTGATGGAAGCTTCT+CGG | 0.388388 | 2.1:-15458034 | MS.gene35436:CDS |
| GATGATGTTGTGGAGTATGC+TGG | 0.388990 | 2.1:-15463009 | MS.gene35436:CDS |
| TCTTTCCCACTTTCCATCCT+GGG | 0.392643 | 2.1:+15457744 | None:intergenic |
| GAAGAAGACCCAGCACGATT+AGG | 0.394372 | 2.1:+15463117 | None:intergenic |
| AAGAAGACCCAGCACGATTA+GGG | 0.398736 | 2.1:+15463118 | None:intergenic |
| CTTCCATGAAATGTATTGAT+AGG | 0.401908 | 2.1:+15458664 | None:intergenic |
| TGCCGTGATGGAAGCTTCTC+GGG | 0.407832 | 2.1:-15458033 | MS.gene35436:CDS |
| TCTCTTCCTCTTACAGTATG+AGG | 0.408181 | 2.1:+15460465 | None:intergenic |
| GACCCAGCACGATTAGGGTT+AGG | 0.414072 | 2.1:+15463123 | None:intergenic |
| TGTATGCCTCAATCGCTTGT+AGG | 0.415074 | 2.1:+15457664 | None:intergenic |
| AAGTTAGTTGATGAAGGCTT+TGG | 0.423312 | 2.1:+15462739 | None:intergenic |
| ATTTGTTACTTGTTGGAAAC+TGG | 0.424650 | 2.1:-15457612 | MS.gene35436:CDS |
| GAAGGCTTTGGAGGTGGAAC+AGG | 0.425435 | 2.1:+15462751 | None:intergenic |
| TCTCGGGCTGAATACCTTGC+CGG | 0.426700 | 2.1:-15458017 | MS.gene35436:CDS |
| TTGGGTTCAGCTCTCTTCGT+GGG | 0.428248 | 2.1:-15458543 | MS.gene35436:CDS |
| GAGGAGCTTGGATTGGTTGT+TGG | 0.431403 | 2.1:-15463033 | MS.gene35436:CDS |
| CAGAATTGTATGATTTGGTC+AGG | 0.432551 | 2.1:-15461813 | MS.gene35436:CDS |
| TGCGTGGCCTGTTGTTGTTT+CGG | 0.437622 | 2.1:-15462650 | MS.gene35436:CDS |
| AATCCTGTTGTTAGCGGTGG+TGG | 0.440498 | 2.1:-15462796 | MS.gene35436:CDS |
| TGGAGAGGAGGAGCTTGGAT+TGG | 0.445208 | 2.1:-15463040 | MS.gene35436:CDS |
| ATGTGAGTTGCAGGATCGTC+AGG | 0.447330 | 2.1:-15457774 | MS.gene35436:intron |
| ACTGCTGAGCCATCTTCCTC+TGG | 0.448049 | 2.1:-15457948 | MS.gene35436:CDS |
| GAATTTAAGTTAGTTGATGA+AGG | 0.450932 | 2.1:+15462733 | None:intergenic |
| TATACATTTCACACATGGCT+TGG | 0.451765 | 2.1:+15458804 | None:intergenic |
| CCCAAGTCCTGCACCAATTG+TGG | 0.451802 | 2.1:+15458561 | None:intergenic |
| ACCCAGCACGATTAGGGTTA+GGG | 0.453125 | 2.1:+15463124 | None:intergenic |
| AATTCAAGAAGGAGTGCATC+GGG | 0.454425 | 2.1:-15462715 | MS.gene35436:CDS |
| CGGCTAGGACTTCGCCTGCT+GGG | 0.458808 | 2.1:-15462630 | MS.gene35436:CDS |
| GAGTAGGAGTATATATGAAT+AGG | 0.459015 | 2.1:+15458776 | None:intergenic |
| GTTCAACGTGGTTCTTCTGC+TGG | 0.459785 | 2.1:-15463183 | MS.gene35436:CDS |
| AACCCTAACCCTAATCGTGC+TGG | 0.461432 | 2.1:-15463126 | MS.gene35436:CDS |
| ACTTACTACATCATCATAAG+AGG | 0.463060 | 2.1:+15462528 | None:intergenic |
| GTTGATGAAGGCTTTGGAGG+TGG | 0.469803 | 2.1:+15462745 | None:intergenic |
| CCACCACCACCGCTAACAAC+AGG | 0.470320 | 2.1:+15462793 | None:intergenic |
| GATCCTGCATTAACAGCATT+AGG | 0.471649 | 2.1:+15462688 | None:intergenic |
| TAATCGTGCTGGGTCTTCTT+CGG | 0.472975 | 2.1:-15463115 | MS.gene35436:CDS |
| GGTCTCGACCTTCATCTCCC+CGG | 0.476006 | 2.1:-15462609 | MS.gene35436:CDS |
| GTCTCGACCTTCATCTCCCC+GGG | 0.476186 | 2.1:-15462608 | MS.gene35436:CDS |
| CACGTCTTTAGGAGCGGGAG+AGG | 0.481120 | 2.1:-15460522 | MS.gene35436:intron |
| GGTCTGCAACAGCACGGAAA+AGG | 0.483309 | 2.1:+15461851 | None:intergenic |
| CTGTGTAACGTGCTCCGGCC+GGG | 0.484018 | 2.1:+15463092 | None:intergenic |
| ACGAAAACTTCATTTCCTAA+AGG | 0.485670 | 2.1:+15462913 | None:intergenic |
| GGAGGTGGAACAGGTGGAGG+TGG | 0.486650 | 2.1:+15462760 | None:intergenic |
| CTTCACTTTCACTATGAGCC+CGG | 0.486820 | 2.1:+15462590 | None:intergenic |
| TGGGTCTTCTTCGGCCCGGC+CGG | 0.487424 | 2.1:-15463106 | MS.gene35436:CDS |
| TTAGTTGATGAAGGCTTTGG+AGG | 0.490951 | 2.1:+15462742 | None:intergenic |
| GTATGCTGGGAGTAGTAATA+GGG | 0.491306 | 2.1:-15462995 | MS.gene35436:CDS |
| TTTGGAGGTGGAACAGGTGG+AGG | 0.494963 | 2.1:+15462757 | None:intergenic |
| TTCACTTTCACTATGAGCCC+GGG | 0.495969 | 2.1:+15462591 | None:intergenic |
| CCACAATTGGTGCAGGACTT+GGG | 0.496349 | 2.1:-15458561 | MS.gene35436:CDS |
| GATGTTAAAGAAGAGGTTGA+GGG | 0.497092 | 2.1:-15462874 | MS.gene35436:CDS |
| GGCTTTGGAGGTGGAACAGG+TGG | 0.497303 | 2.1:+15462754 | None:intergenic |
| TGCACCTGTGTAACGTGCTC+CGG | 0.499439 | 2.1:+15463087 | None:intergenic |
| GGAAATTGAACTTGCCGTGA+TGG | 0.500131 | 2.1:-15458045 | MS.gene35436:CDS |
| CTTGGGTTCAGCTCTCTTCG+TGG | 0.501925 | 2.1:-15458544 | MS.gene35436:CDS |
| TAGTTACCTACAAGCGATTG+AGG | 0.502638 | 2.1:-15457670 | MS.gene35436:CDS |
| CCTGTGTAACGTGCTCCGGC+CGG | 0.503618 | 2.1:+15463091 | None:intergenic |
| CATGAATATGTTACTGTCGA+TGG | 0.506460 | 2.1:-15457697 | MS.gene35436:CDS |
| TAAGAGGAAGAGAAGAGATA+AGG | 0.507324 | 2.1:-15460455 | MS.gene35436:intron |
| GCACCAATTGTGGGACGCCG+TGG | 0.510578 | 2.1:+15458571 | None:intergenic |
| CTATGAGCCCGGGGAGATGA+AGG | 0.510791 | 2.1:+15462601 | None:intergenic |
| CCAAGTCCTGCACCAATTGT+GGG | 0.516638 | 2.1:+15458562 | None:intergenic |
| TGATGAAAACTTAGGCGTAC+TGG | 0.517126 | 2.1:+15458622 | None:intergenic |
| CTGTTGCAGACCAAGTGTAC+GGG | 0.517724 | 2.1:-15461840 | MS.gene35436:CDS |
| AGATGTTAAAGAAGAGGTTG+AGG | 0.517829 | 2.1:-15462875 | MS.gene35436:CDS |
| ATGATGTTGTGGAGTATGCT+GGG | 0.520937 | 2.1:-15463008 | MS.gene35436:CDS |
| GTCCTAGCCGAAACAACAAC+AGG | 0.525011 | 2.1:+15462643 | None:intergenic |
| ATAAGCTCTACCTGTGGAGT+AGG | 0.529541 | 2.1:+15458760 | None:intergenic |
| TCTCCTAATGCTGTTAATGC+AGG | 0.529824 | 2.1:-15462691 | MS.gene35436:CDS |
| GGTTGTTGGTGATGATGTTG+TGG | 0.533732 | 2.1:-15463019 | MS.gene35436:CDS |
| GCTGTTGCAGACCAAGTGTA+CGG | 0.534570 | 2.1:-15461841 | MS.gene35436:CDS |
| GTTTGAAATTGATATTAGAA+GGG | 0.536886 | 2.1:-15461917 | MS.gene35436:CDS |
| AAGCCCTCGTTCTCTATCAC+TGG | 0.537120 | 2.1:+15462829 | None:intergenic |
| GGTTACCATGATGAAAACTT+AGG | 0.539612 | 2.1:+15458614 | None:intergenic |
| GGTCAACAAGGGAGTTGTAA+TGG | 0.546094 | 2.1:+15458593 | None:intergenic |
| TGGGACGCCGTGGGTCAACA+AGG | 0.546376 | 2.1:+15458581 | None:intergenic |
| ATGAATATGTTACTGTCGAT+GGG | 0.547760 | 2.1:-15457696 | MS.gene35436:CDS |
| CCTGTTGTTAGCGGTGGTGG+TGG | 0.548646 | 2.1:-15462793 | MS.gene35436:CDS |
| GATCGTCAGGTAGTGATCCC+AGG | 0.549376 | 2.1:-15457761 | MS.gene35436:CDS |
| CGGCGTCCCACAATTGGTGC+AGG | 0.549910 | 2.1:-15458568 | MS.gene35436:CDS |
| TAGGCGTACTGGTGGTGTAT+TGG | 0.549946 | 2.1:+15458633 | None:intergenic |
| TAACTTGCTCCAGAGGAAGA+TGG | 0.550315 | 2.1:+15457939 | None:intergenic |
| GGCCACGCAGATCCTCTCCT+TGG | 0.551230 | 2.1:+15462664 | None:intergenic |
| ACAGGTGCAATCTGTTGCTA+AGG | 0.553828 | 2.1:-15463073 | MS.gene35436:CDS |
| GGCCTGTTGTTGTTTCGGCT+AGG | 0.555957 | 2.1:-15462645 | MS.gene35436:CDS |
| TGGGAAAGATGTTAAAGAAG+AGG | 0.556245 | 2.1:-15462881 | MS.gene35436:CDS |
| GGCAGCAGTAGCAGACGTAA+AGG | 0.563278 | 2.1:-15457591 | MS.gene35436:CDS |
| ACCCTAACCCTAATCGTGCT+GGG | 0.564355 | 2.1:-15463125 | MS.gene35436:CDS |
| CAACTAACTTAAATTCAAGA+AGG | 0.565387 | 2.1:-15462726 | MS.gene35436:CDS |
| ACAACTCCCTTGTTGACCCA+CGG | 0.570726 | 2.1:-15458588 | MS.gene35436:CDS |
| ATTCTGAGTCCCCGTACACT+TGG | 0.573961 | 2.1:+15461830 | None:intergenic |
| CACCAATTGTGGGACGCCGT+GGG | 0.574073 | 2.1:+15458572 | None:intergenic |
| GATGAAGGTCGAGACCCAGC+AGG | 0.574826 | 2.1:+15462616 | None:intergenic |
| GTTGCTAAGGATGAAGAAAG+TGG | 0.575080 | 2.1:-15463060 | MS.gene35436:CDS |
| TCTTCTTTAACATCTTTCCC+AGG | 0.576255 | 2.1:+15462883 | None:intergenic |
| GGATGAAGAAAGTGGAGAGG+AGG | 0.578913 | 2.1:-15463052 | MS.gene35436:CDS |
| GAGATATTAACTTGCTCCAG+AGG | 0.579465 | 2.1:+15457932 | None:intergenic |
| GTTTGCAAGAATCGAGGGAA+AGG | 0.580810 | 2.1:-15462852 | MS.gene35436:CDS |
| AAATTCAAGAAGGAGTGCAT+CGG | 0.581706 | 2.1:-15462716 | MS.gene35436:CDS |
| CATATATACTCCTACTCCAC+AGG | 0.582359 | 2.1:-15458770 | MS.gene35436:intron |
| TCATAAGAGGACACATAGCA+TGG | 0.582849 | 2.1:+15462541 | None:intergenic |
| GGTACATTTAAGCAACAACT+TGG | 0.583320 | 2.1:-15457993 | MS.gene35436:CDS |
| TTGTTGCTTAAATGTACCAC+CGG | 0.583828 | 2.1:+15457998 | None:intergenic |
| TGATCTTGAGCTCACAGAGA+AGG | 0.583852 | 2.1:-15458066 | MS.gene35436:CDS |
| TGAGGGTTTGCAAGAATCGA+GGG | 0.588811 | 2.1:-15462857 | MS.gene35436:CDS |
| TGGGTTCAGCTCTCTTCGTG+GGG | 0.593495 | 2.1:-15458542 | MS.gene35436:intron |
| AGTGATCCCAGGATGGAAAG+TGG | 0.596810 | 2.1:-15457750 | MS.gene35436:CDS |
| TAAGGATGAAGAAAGTGGAG+AGG | 0.597056 | 2.1:-15463055 | MS.gene35436:CDS |
| ACGTCTTTAGGAGCGGGAGA+GGG | 0.598464 | 2.1:-15460521 | MS.gene35436:intron |
| GTGATCCCAGGATGGAAAGT+GGG | 0.600838 | 2.1:-15457749 | MS.gene35436:CDS |
| TTGAGGGTTTGCAAGAATCG+AGG | 0.601359 | 2.1:-15462858 | MS.gene35436:CDS |
| GAGGGTAATCCTGTTGTTAG+CGG | 0.603801 | 2.1:-15462802 | MS.gene35436:CDS |
| CAGTAGCAGACGTAAAGGAA+AGG | 0.605981 | 2.1:-15457586 | MS.gene35436:CDS |
| AGAGAACGAGGGCTTGTGTG+AGG | 0.609028 | 2.1:-15462821 | MS.gene35436:CDS |
| GCTTAAATGTACCACCGGCA+AGG | 0.611381 | 2.1:+15458003 | None:intergenic |
| CGGGCTCATAGTGAAAGTGA+AGG | 0.622688 | 2.1:-15462589 | MS.gene35436:CDS |
| GTGCTGGGTCTTCTTCGGCC+CGG | 0.623317 | 2.1:-15463110 | MS.gene35436:CDS |
| GAGAACGAGGGCTTGTGTGA+GGG | 0.624656 | 2.1:-15462820 | MS.gene35436:CDS |
| GTCAGGTAGTGATCCCAGGA+TGG | 0.629925 | 2.1:-15457757 | MS.gene35436:CDS |
| AGCCCGAGAAGCTTCCATCA+CGG | 0.635675 | 2.1:+15458031 | None:intergenic |
| TCGATTATACATTTCACACA+TGG | 0.637286 | 2.1:+15458799 | None:intergenic |
| TGAGGCATACAGCATATTTG+GGG | 0.641767 | 2.1:-15457652 | MS.gene35436:CDS |
| TGTTGACAAAGATCAAGTCA+AGG | 0.644135 | 2.1:-15458259 | MS.gene35436:CDS |
| GGTAATCCTGTTGTTAGCGG+TGG | 0.646970 | 2.1:-15462799 | MS.gene35436:CDS |
| CGGGCTGAATACCTTGCCGG+TGG | 0.647286 | 2.1:-15458014 | MS.gene35436:CDS |
| TCACTTTCACTATGAGCCCG+GGG | 0.647451 | 2.1:+15462592 | None:intergenic |
| CCGGCCGGAGCACGTTACAC+AGG | 0.649179 | 2.1:-15463091 | MS.gene35436:CDS |
| GGGCTCATAGTGAAAGTGAA+GGG | 0.654153 | 2.1:-15462588 | MS.gene35436:CDS |
| GGGACGCCGTGGGTCAACAA+GGG | 0.656673 | 2.1:+15458582 | None:intergenic |
| ACACTTGGTCTGCAACAGCA+CGG | 0.659941 | 2.1:+15461845 | None:intergenic |
| AAGGCCAGTGATAGAGAACG+AGG | 0.680419 | 2.1:-15462833 | MS.gene35436:CDS |
| TGTTGCAGACCAAGTGTACG+GGG | 0.685558 | 2.1:-15461839 | MS.gene35436:CDS |
| AATGCAGGATCACCAAGGAG+AGG | 0.689700 | 2.1:-15462676 | MS.gene35436:CDS |
| CTGTTAATGCAGGATCACCA+AGG | 0.695840 | 2.1:-15462681 | MS.gene35436:CDS |
| AGGCCAGTGATAGAGAACGA+GGG | 0.741926 | 2.1:-15462832 | MS.gene35436:CDS |
| TGAAAACTTAGGCGTACTGG+TGG | 0.744384 | 2.1:+15458625 | None:intergenic |
| ATTCAAGAAGGAGTGCATCG+GGG | 0.750742 | 2.1:-15462714 | MS.gene35436:CDS |
| CACCAAGGAGAGGATCTGCG+TGG | 0.755511 | 2.1:-15462666 | MS.gene35436:CDS |
| ACTCGTATCTATGTTCAACG+TGG | 0.784709 | 2.1:-15463195 | MS.gene35436:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAATTTCTAAATATTT+AGG | - | chr2.1:15460467-15460486 | MS.gene35436:CDS | 10.0% |
| !! | TTACAAAAATGATATTATAT+AGG | - | chr2.1:15460046-15460065 | MS.gene35436:intron | 10.0% |
| !! | TTATATATTAGTTAATTAGA+AGG | - | chr2.1:15458757-15458776 | MS.gene35436:intron | 10.0% |
| !! | AACAAATTTCAAAATATTTG+TGG | + | chr2.1:15460659-15460678 | None:intergenic | 15.0% |
| !! | ACATAAAAAGTTTAAACAAA+TGG | + | chr2.1:15461319-15461338 | None:intergenic | 15.0% |
| !! | CATAAAAAGTTTAAACAAAT+GGG | + | chr2.1:15461318-15461337 | None:intergenic | 15.0% |
| !! | GATAATATCTTATATTGAAA+TGG | - | chr2.1:15458801-15458820 | MS.gene35436:CDS | 15.0% |
| !!! | ACTTTTTAACTTTTTTGAAT+AGG | - | chr2.1:15461896-15461915 | MS.gene35436:CDS | 15.0% |
| !!! | ATTTAAGAAGATTTGATTTT+AGG | - | chr2.1:15459289-15459308 | MS.gene35436:intron | 15.0% |
| !!! | TTAAACTTTTTATGTATACT+TGG | - | chr2.1:15461324-15461343 | MS.gene35436:intron | 15.0% |
| !!! | TTTGATTTAAAATAGTTAGT+TGG | - | chr2.1:15461253-15461272 | MS.gene35436:intron | 15.0% |
| !! | AAATGGTGTAAACTAAATAT+GGG | + | chr2.1:15460636-15460655 | None:intergenic | 20.0% |
| !! | AATCATTAACAAGAAAATCA+AGG | + | chr2.1:15461757-15461776 | None:intergenic | 20.0% |
| !! | AATTCTATTAAAATATTGCC+TGG | - | chr2.1:15460195-15460214 | MS.gene35436:intron | 20.0% |
| !! | AATTTCTGTTCAATGTAATA+TGG | + | chr2.1:15462447-15462466 | None:intergenic | 20.0% |
| !! | ACAAAATCAAAGAAATGTTA+GGG | - | chr2.1:15459436-15459455 | MS.gene35436:intron | 20.0% |
| !! | ATCATTAACAAGAAAATCAA+GGG | + | chr2.1:15461756-15461775 | None:intergenic | 20.0% |
| !! | ATTATATGGTATGTTAATGT+TGG | - | chr2.1:15458996-15459015 | MS.gene35436:intron | 20.0% |
| !! | CGTAATATATTGAACTTATT+AGG | - | chr2.1:15459066-15459085 | MS.gene35436:intron | 20.0% |
| !! | GTTCTCATTAAGTAATTAAT+TGG | - | chr2.1:15458281-15458300 | MS.gene35436:intron | 20.0% |
| !! | GTTTACATGTAATAAACTAA+AGG | + | chr2.1:15461706-15461725 | None:intergenic | 20.0% |
| !! | TAAATTTACATTTATACCAC+AGG | + | chr2.1:15459963-15459982 | None:intergenic | 20.0% |
| !! | TACAAAATCAAAGAAATGTT+AGG | - | chr2.1:15459435-15459454 | MS.gene35436:intron | 20.0% |
| !! | TATATTGGCATGTTAATATT+GGG | - | chr2.1:15458682-15458701 | MS.gene35436:intron | 20.0% |
| !! | TGGTATAAATGTAAATTTAG+CGG | - | chr2.1:15459964-15459983 | MS.gene35436:intron | 20.0% |
| !! | TTAATTACTTAATGAGAACA+AGG | + | chr2.1:15458280-15458299 | None:intergenic | 20.0% |
| !! | TTATATGGTATGTTAATGTT+GGG | - | chr2.1:15458997-15459016 | MS.gene35436:intron | 20.0% |
| !! | TTTAAAAACAATACATGCTA+GGG | + | chr2.1:15460449-15460468 | None:intergenic | 20.0% |
| !! | TTTCAAAATATTTGTGGAAA+TGG | + | chr2.1:15460653-15460672 | None:intergenic | 20.0% |
| !!! | AGTTTGAAATTGATATTAGA+AGG | - | chr2.1:15458855-15458874 | MS.gene35436:intron | 20.0% |
| !!! | CATGAATTTTTTATTATAGC+TGG | - | chr2.1:15459392-15459411 | MS.gene35436:intron | 20.0% |
| !!! | CTTTCTATTTTATTGTATGA+TGG | - | chr2.1:15462295-15462314 | MS.gene35436:intron | 20.0% |
| !!! | GTTTGAAATTGATATTAGAA+GGG | - | chr2.1:15458856-15458875 | MS.gene35436:intron | 20.0% |
| !!! | TCTATTGATAGATTTAAGAT+GGG | + | chr2.1:15462903-15462922 | None:intergenic | 20.0% |
| !!! | TTCTTTGATTTTGTAACAAA+AGG | + | chr2.1:15459430-15459449 | None:intergenic | 20.0% |
| !!! | TTGATGTATTTGTTGAAATT+TGG | - | chr2.1:15462949-15462968 | MS.gene35436:CDS | 20.0% |
| !!! | TTTTAAAAACAATACATGCT+AGG | + | chr2.1:15460450-15460469 | None:intergenic | 20.0% |
| !!! | TTTTAAGATGTAAATAAGCA+AGG | - | chr2.1:15459503-15459522 | MS.gene35436:intron | 20.0% |
| !!! | TTTTCTCAATTTATAACAGA+AGG | - | chr2.1:15460280-15460299 | MS.gene35436:intron | 20.0% |
| ! | AAAAGCGGTATTTATTATGA+AGG | - | chr2.1:15459154-15459173 | MS.gene35436:intron | 25.0% |
| ! | AAACTATCCTACAATTTAAC+TGG | - | chr2.1:15458538-15458557 | MS.gene35436:intron | 25.0% |
| ! | AAATGAAGACTTTCCATTAA+AGG | + | chr2.1:15457818-15457837 | None:intergenic | 25.0% |
| ! | AACTATCCTACAATTTAACT+GGG | - | chr2.1:15458539-15458558 | MS.gene35436:intron | 25.0% |
| ! | AATGAAGACTTTCCATTAAA+GGG | + | chr2.1:15457817-15457836 | None:intergenic | 25.0% |
| ! | AATGCGGTTTAAACAAAAAA+GGG | + | chr2.1:15460791-15460810 | None:intergenic | 25.0% |
| ! | AATTACACTAAAACATGGAA+TGG | + | chr2.1:15459891-15459910 | None:intergenic | 25.0% |
| ! | ATATCTCTTCTCATACAATT+TGG | - | chr2.1:15462857-15462876 | MS.gene35436:CDS | 25.0% |
| ! | ATATCTTGACAAAAACAATG+CGG | + | chr2.1:15460807-15460826 | None:intergenic | 25.0% |
| ! | ATGTAAATAAGCAAGGAATA+AGG | - | chr2.1:15459510-15459529 | MS.gene35436:intron | 25.0% |
| ! | ATTACATGTAAACACATTAC+AGG | - | chr2.1:15461713-15461732 | MS.gene35436:intron | 25.0% |
| ! | ATTGATATTAGAAGGGTAAA+AGG | - | chr2.1:15458863-15458882 | MS.gene35436:intron | 25.0% |
| ! | CAACTAACTTAAATTCAAGA+AGG | - | chr2.1:15458047-15458066 | MS.gene35436:CDS | 25.0% |
| ! | CAATATTAACATGCCAATAT+AGG | + | chr2.1:15458683-15458702 | None:intergenic | 25.0% |
| ! | CTATATTGGCATGTTAATAT+TGG | - | chr2.1:15458681-15458700 | MS.gene35436:intron | 25.0% |
| ! | GAAATGGTGTAAACTAAATA+TGG | + | chr2.1:15460637-15460656 | None:intergenic | 25.0% |
| ! | GCTAAAATTACACTAAAACA+TGG | + | chr2.1:15459896-15459915 | None:intergenic | 25.0% |
| ! | GTCTATTGATAGATTTAAGA+TGG | + | chr2.1:15462904-15462923 | None:intergenic | 25.0% |
| ! | GTTCTTTAAATTGAACTTGA+CGG | - | chr2.1:15462619-15462638 | MS.gene35436:CDS | 25.0% |
| ! | TAACTATAACTGTAACTTCA+CGG | + | chr2.1:15461365-15461384 | None:intergenic | 25.0% |
| ! | TACATTGAACAGAAATTGAT+TGG | - | chr2.1:15462450-15462469 | MS.gene35436:intron | 25.0% |
| ! | TATCAATAGACAGATTCATA+TGG | - | chr2.1:15462913-15462932 | MS.gene35436:CDS | 25.0% |
| ! | TGTAAATAAGCAAGGAATAA+GGG | - | chr2.1:15459511-15459530 | MS.gene35436:intron | 25.0% |
| !! | ACTTACTTATTTGATTTCCA+CGG | - | chr2.1:15459111-15459130 | MS.gene35436:intron | 25.0% |
| !! | ATGTATTTGTTGAAATTTGG+TGG | - | chr2.1:15462952-15462971 | MS.gene35436:CDS | 25.0% |
| !! | TTAATTAGAAGGTTGATTCA+TGG | - | chr2.1:15458768-15458787 | MS.gene35436:intron | 25.0% |
| !!! | AATTTTTTATTATAGCTGGC+CGG | - | chr2.1:15459396-15459415 | MS.gene35436:intron | 25.0% |
| !!! | ACATTTTTTCCTTCATATAG+TGG | + | chr2.1:15460024-15460043 | None:intergenic | 25.0% |
| !!! | CATAATAAATACCGCTTTTT+GGG | + | chr2.1:15459153-15459172 | None:intergenic | 25.0% |
| !!! | CATTTTTTCCTTCATATAGT+GGG | + | chr2.1:15460023-15460042 | None:intergenic | 25.0% |
| !!! | GAAATTTGTTTTGTACTAAC+AGG | - | chr2.1:15460669-15460688 | MS.gene35436:intron | 25.0% |
| !!! | GAATTTAAGTTAGTTGATGA+AGG | + | chr2.1:15458043-15458062 | None:intergenic | 25.0% |
| !!! | GTTTTTTCCTATGAGAAATT+TGG | - | chr2.1:15460991-15461010 | MS.gene35436:intron | 25.0% |
| !!! | TCATAATAAATACCGCTTTT+TGG | + | chr2.1:15459154-15459173 | None:intergenic | 25.0% |
| !!! | TTCTATGATTTGTTACTTGT+TGG | - | chr2.1:15463154-15463173 | MS.gene35436:CDS | 25.0% |
| !!! | TTTTGAAAGAGTTGTTTGTT+AGG | - | chr2.1:15458654-15458673 | MS.gene35436:CDS | 25.0% |
| !!! | TTTTTTTTATATCCCCAGTT+AGG | - | chr2.1:15458333-15458352 | MS.gene35436:intron | 25.0% |
| AACAGAAATTGATTGGAAGA+TGG | - | chr2.1:15462457-15462476 | MS.gene35436:intron | 30.0% | |
| AATAGACAGATTCATATGGT+CGG | - | chr2.1:15462917-15462936 | MS.gene35436:CDS | 30.0% | |
| AATTAGAATCCTACCATGAT+GGG | + | chr2.1:15459868-15459887 | None:intergenic | 30.0% | |
| ACATAATTTAGGCTTCTATG+TGG | - | chr2.1:15460350-15460369 | MS.gene35436:intron | 30.0% | |
| ACGAAAACTTCATTTCCTAA+AGG | + | chr2.1:15457863-15457882 | None:intergenic | 30.0% | |
| ACTTACTACATCATCATAAG+AGG | + | chr2.1:15458248-15458267 | None:intergenic | 30.0% | |
| AGACAGTTTCCAAGTTATAT+AGG | + | chr2.1:15462424-15462443 | None:intergenic | 30.0% | |
| AGGTTAGCAATTCATATTGA+AGG | - | chr2.1:15459309-15459328 | MS.gene35436:intron | 30.0% | |
| ATAAAACCTAAGCCAACAAA+TGG | - | chr2.1:15459636-15459655 | MS.gene35436:intron | 30.0% | |
| ATAAGATATTATCGCAGTGA+AGG | + | chr2.1:15458794-15458813 | None:intergenic | 30.0% | |
| ATAATCGCCAAATTTCTCAT+AGG | + | chr2.1:15461001-15461020 | None:intergenic | 30.0% | |
| ATCTCTTTATCGTATGTGAT+GGG | + | chr2.1:15461491-15461510 | None:intergenic | 30.0% | |
| ATGAATATGTTACTGTCGAT+GGG | - | chr2.1:15463077-15463096 | MS.gene35436:CDS | 30.0% | |
| ATGCAAAATAATCCAGATGT+GGG | - | chr2.1:15460742-15460761 | MS.gene35436:intron | 30.0% | |
| ATTTCCTTCATTCCATTTGT+TGG | + | chr2.1:15459651-15459670 | None:intergenic | 30.0% | |
| CAATGCGGTTTAAACAAAAA+AGG | + | chr2.1:15460792-15460811 | None:intergenic | 30.0% | |
| GAAAATAACTGAATGAAGAG+CGG | + | chr2.1:15460874-15460893 | None:intergenic | 30.0% | |
| GAATGAGCAAATATAATGTC+TGG | + | chr2.1:15459702-15459721 | None:intergenic | 30.0% | |
| GACAGTTTCCAAGTTATATA+GGG | + | chr2.1:15462423-15462442 | None:intergenic | 30.0% | |
| GACATTATATTTGCTCATTC+TGG | - | chr2.1:15459702-15459721 | MS.gene35436:intron | 30.0% | |
| GATCGAATAGTCAATAGAAT+TGG | - | chr2.1:15461064-15461083 | MS.gene35436:intron | 30.0% | |
| GATGTAACACAATACATCAA+GGG | + | chr2.1:15459735-15459754 | None:intergenic | 30.0% | |
| GGTATGTCAGAACATAATTT+AGG | - | chr2.1:15460339-15460358 | MS.gene35436:intron | 30.0% | |
| GTAAATATGTTAACCCTTTC+TGG | - | chr2.1:15461920-15461939 | MS.gene35436:CDS | 30.0% | |
| TAAAAAGAATGTCAGAGGAT+GGG | - | chr2.1:15458894-15458913 | MS.gene35436:intron | 30.0% | |
| TAATTCTCTTTATCACGACA+AGG | + | chr2.1:15461028-15461047 | None:intergenic | 30.0% | |
| TACAGCTTTCAAAACATTTG+TGG | + | chr2.1:15460502-15460521 | None:intergenic | 30.0% | |
| TATTTATTATGAAGGTCCCT+GGG | - | chr2.1:15459162-15459181 | MS.gene35436:intron | 30.0% | |
| TCGATTATACATTTCACACA+TGG | + | chr2.1:15461977-15461996 | None:intergenic | 30.0% | |
| TGAAGTAAAAAGAATGTCAG+AGG | - | chr2.1:15458889-15458908 | MS.gene35436:intron | 30.0% | |
| TGATGTAACACAATACATCA+AGG | + | chr2.1:15459736-15459755 | None:intergenic | 30.0% | |
| TTCTACAAAAATATTGCCTG+TGG | - | chr2.1:15459822-15459841 | MS.gene35436:intron | 30.0% | |
| ! | AAACACATTACAGGATTTTC+TGG | - | chr2.1:15461722-15461741 | MS.gene35436:intron | 30.0% |
| ! | AAGCTGTACTTTTGTACTTA+TGG | - | chr2.1:15460514-15460533 | MS.gene35436:CDS | 30.0% |
| ! | AATACATGCTAGGGAAATTT+TGG | + | chr2.1:15460440-15460459 | None:intergenic | 30.0% |
| ! | AATGGAAAGTCTTCATTTTG+AGG | - | chr2.1:15457820-15457839 | MS.gene35436:intron | 30.0% |
| ! | ACAAAATTAGTTTGATCACC+AGG | + | chr2.1:15460216-15460235 | None:intergenic | 30.0% |
| ! | ATTTGTTACTTGTTGGAAAC+TGG | - | chr2.1:15463161-15463180 | MS.gene35436:CDS | 30.0% |
| ! | CAAATTTGTGTTTTGTCAGT+TGG | + | chr2.1:15462347-15462366 | None:intergenic | 30.0% |
| ! | CGTGTAGGACATAATTTTTA+TGG | - | chr2.1:15458410-15458429 | MS.gene35436:intron | 30.0% |
| ! | CTTACTTATTTGATTTCCAC+GGG | - | chr2.1:15459112-15459131 | MS.gene35436:intron | 30.0% |
| ! | CTTCCATGAAATGTATTGAT+AGG | + | chr2.1:15462112-15462131 | None:intergenic | 30.0% |
| ! | GAATGTGAATTTTCAACTAC+CGG | + | chr2.1:15460709-15460728 | None:intergenic | 30.0% |
| ! | GAGTAGGAGTATATATGAAT+AGG | + | chr2.1:15462000-15462019 | None:intergenic | 30.0% |
| ! | GGGTCTTTGGTATTTAATTT+AGG | - | chr2.1:15461100-15461119 | MS.gene35436:intron | 30.0% |
| ! | GTTTGTTAGGTTTCCTATAT+TGG | - | chr2.1:15458667-15458686 | MS.gene35436:CDS | 30.0% |
| ! | TAGATGGCATATTTTTCTTC+TGG | - | chr2.1:15460148-15460167 | MS.gene35436:intron | 30.0% |
| ! | TATCCATATTTCTGCTTTGT+TGG | - | chr2.1:15459041-15459060 | MS.gene35436:intron | 30.0% |
| ! | TTCCTTTAAAGAAGTGTGTT+TGG | - | chr2.1:15461170-15461189 | MS.gene35436:intron | 30.0% |
| !! | TACCTTTCCCTCTAAAATAA+GGG | - | chr2.1:15461791-15461810 | MS.gene35436:intron | 30.0% |
| !! | TACTTGCATTATCGATTTGT+TGG | + | chr2.1:15462562-15462581 | None:intergenic | 30.0% |
| !! | TTACCTTTCCCTCTAAAATA+AGG | - | chr2.1:15461790-15461809 | MS.gene35436:intron | 30.0% |
| !! | TTTTCTCACTTTTGCTTAGA+TGG | - | chr2.1:15460132-15460151 | MS.gene35436:intron | 30.0% |
| !! | TTTTCTCATTTTTGTTCAGC+TGG | - | chr2.1:15459758-15459777 | MS.gene35436:intron | 30.0% |
| !!! | AAAGTGATCCCTTATTTTAG+AGG | + | chr2.1:15461802-15461821 | None:intergenic | 30.0% |
| !!! | AAGTGATCCCTTATTTTAGA+GGG | + | chr2.1:15461801-15461820 | None:intergenic | 30.0% |
| AAAGAGTGATGACCCTTTAA+TGG | - | chr2.1:15457802-15457821 | MS.gene35436:intron | 35.0% | |
| AAGTAGCCCAGTTAAATTGT+AGG | + | chr2.1:15458548-15458567 | None:intergenic | 35.0% | |
| AATAGTCAATAGAATTGGCG+GGG | - | chr2.1:15461069-15461088 | MS.gene35436:intron | 35.0% | |
| AATGATACGCATACTCCTTT+AGG | - | chr2.1:15457845-15457864 | MS.gene35436:intron | 35.0% | |
| AATTGAAACATGAACAGCGT+TGG | - | chr2.1:15459557-15459576 | MS.gene35436:intron | 35.0% | |
| ACTCTCAGAAGTTAAAGTTC+AGG | + | chr2.1:15459595-15459614 | None:intergenic | 35.0% | |
| AGATGTTAAAGAAGAGGTTG+AGG | - | chr2.1:15457898-15457917 | MS.gene35436:intron | 35.0% | |
| AGCAGAAATATGGATACTGA+AGG | + | chr2.1:15459037-15459056 | None:intergenic | 35.0% | |
| AGCCAAACACACTTCTTTAA+AGG | + | chr2.1:15461175-15461194 | None:intergenic | 35.0% | |
| ATTGAGGCATACAGCATATT+TGG | - | chr2.1:15463119-15463138 | MS.gene35436:CDS | 35.0% | |
| ATTGATTGGAAGATGGTTGA+CGG | - | chr2.1:15462464-15462483 | MS.gene35436:intron | 35.0% | |
| CAAATCTCAATGGACATGTT+AGG | - | chr2.1:15461551-15461570 | MS.gene35436:intron | 35.0% | |
| CATCTCTTTATCGTATGTGA+TGG | + | chr2.1:15461492-15461511 | None:intergenic | 35.0% | |
| CATCTTAGAAGAGTAAAGCA+TGG | + | chr2.1:15460920-15460939 | None:intergenic | 35.0% | |
| CATGAATATGTTACTGTCGA+TGG | - | chr2.1:15463076-15463095 | MS.gene35436:CDS | 35.0% | |
| CATGCAAAATAATCCAGATG+TGG | - | chr2.1:15460741-15460760 | MS.gene35436:intron | 35.0% | |
| CATTCTGATTTCACGTCTTT+AGG | - | chr2.1:15460240-15460259 | MS.gene35436:intron | 35.0% | |
| CGAATAGTCAATAGAATTGG+CGG | - | chr2.1:15461067-15461086 | MS.gene35436:intron | 35.0% | |
| CTTTAGTGTGCCAATTAATC+CGG | - | chr2.1:15460580-15460599 | MS.gene35436:intron | 35.0% | |
| GAATAGTCAATAGAATTGGC+GGG | - | chr2.1:15461068-15461087 | MS.gene35436:intron | 35.0% | |
| GAATTAGAATCCTACCATGA+TGG | + | chr2.1:15459869-15459888 | None:intergenic | 35.0% | |
| GAGAATGAGTTAGTGAGAAT+GGG | - | chr2.1:15459470-15459489 | MS.gene35436:intron | 35.0% | |
| GAGCCTATCAATACATTTCA+TGG | - | chr2.1:15462106-15462125 | MS.gene35436:intron | 35.0% | |
| GATCCAACAAAGCAGAAATA+TGG | + | chr2.1:15459047-15459066 | None:intergenic | 35.0% | |
| GATGTTAAAGAAGAGGTTGA+GGG | - | chr2.1:15457899-15457918 | MS.gene35436:intron | 35.0% | |
| GGACTCAGAATTGTATGATT+TGG | - | chr2.1:15458955-15458974 | MS.gene35436:intron | 35.0% | |
| GGTACATTTAAGCAACAACT+TGG | - | chr2.1:15462780-15462799 | MS.gene35436:CDS | 35.0% | |
| GGTTACCATGATGAAAACTT+AGG | + | chr2.1:15462162-15462181 | None:intergenic | 35.0% | |
| GTAAAAAGAATGTCAGAGGA+TGG | - | chr2.1:15458893-15458912 | MS.gene35436:intron | 35.0% | |
| GTAACAAAAGGTCATAAGTC+CGG | + | chr2.1:15459418-15459437 | None:intergenic | 35.0% | |
| GTATTTATTATGAAGGTCCC+TGG | - | chr2.1:15459161-15459180 | MS.gene35436:intron | 35.0% | |
| GTGTAAACTAAATATGGGCT+GGG | + | chr2.1:15460631-15460650 | None:intergenic | 35.0% | |
| TAAGAGGAAGAGAAGAGATA+AGG | - | chr2.1:15460318-15460337 | MS.gene35436:intron | 35.0% | |
| TAAGCCAACAAATGGAATGA+AGG | - | chr2.1:15459644-15459663 | MS.gene35436:intron | 35.0% | |
| TAGTGACATACTGCAGAATT+AGG | - | chr2.1:15459222-15459241 | MS.gene35436:intron | 35.0% | |
| TATACATTTCACACATGGCT+TGG | + | chr2.1:15461972-15461991 | None:intergenic | 35.0% | |
| TATAGAAGCCCCAAAAGAAA+GGG | - | chr2.1:15462397-15462416 | MS.gene35436:intron | 35.0% | |
| TATTCTGCCAAAAGACTTGT+AGG | - | chr2.1:15458435-15458454 | MS.gene35436:intron | 35.0% | |
| TCGTGTATCTCAAATCTCAA+TGG | - | chr2.1:15461541-15461560 | MS.gene35436:intron | 35.0% | |
| TCTTCTTTAACATCTTTCCC+AGG | + | chr2.1:15457893-15457912 | None:intergenic | 35.0% | |
| TGAGAATGAGTTAGTGAGAA+TGG | - | chr2.1:15459469-15459488 | MS.gene35436:intron | 35.0% | |
| TGGGAAAGATGTTAAAGAAG+AGG | - | chr2.1:15457892-15457911 | MS.gene35436:intron | 35.0% | |
| TGTTGACAAAGATCAAGTCA+AGG | - | chr2.1:15462514-15462533 | MS.gene35436:intron | 35.0% | |
| TTATAGAAGCCCCAAAAGAA+AGG | - | chr2.1:15462396-15462415 | MS.gene35436:intron | 35.0% | |
| TTGACACATTCAAAACCAAG+TGG | + | chr2.1:15461582-15461601 | None:intergenic | 35.0% | |
| TTGAGGCATACAGCATATTT+GGG | - | chr2.1:15463120-15463139 | MS.gene35436:CDS | 35.0% | |
| ! | AAATTCAAGAAGGAGTGCAT+CGG | - | chr2.1:15458057-15458076 | MS.gene35436:CDS | 35.0% |
| ! | AAGTTTTCGTTGATCTTCCT+GGG | - | chr2.1:15457873-15457892 | MS.gene35436:intron | 35.0% |
| ! | ATTTAATTTAGGTGCAGCAG+TGG | - | chr2.1:15461111-15461130 | MS.gene35436:intron | 35.0% |
| ! | ATTTTACTCCCTTATAGCTG+TGG | - | chr2.1:15461140-15461159 | MS.gene35436:intron | 35.0% |
| ! | CTCATTAGATTTGCTCATTC+TGG | - | chr2.1:15459930-15459949 | MS.gene35436:intron | 35.0% |
| ! | CTCTTATAGCATTGAAGAGA+AGG | + | chr2.1:15458481-15458500 | None:intergenic | 35.0% |
| ! | GTTTTACCTCATACTGTAAG+AGG | - | chr2.1:15460302-15460321 | MS.gene35436:intron | 35.0% |
| ! | TATATAGGGCCCTTTCTTTT+GGG | + | chr2.1:15462409-15462428 | None:intergenic | 35.0% |
| ! | TTATATAGGGCCCTTTCTTT+TGG | + | chr2.1:15462410-15462429 | None:intergenic | 35.0% |
| ! | TTGTTGCTTAAATGTACCAC+CGG | + | chr2.1:15462778-15462797 | None:intergenic | 35.0% |
| !! | AAGTTAGTTGATGAAGGCTT+TGG | + | chr2.1:15458037-15458056 | None:intergenic | 35.0% |
| !! | CAGAATTGTATGATTTGGTC+AGG | - | chr2.1:15458960-15458979 | MS.gene35436:intron | 35.0% |
| !! | TTCATTCCATTTGTTGGCTT+AGG | + | chr2.1:15459645-15459664 | None:intergenic | 35.0% |
| !! | TTGGTAACTCTTGAGTCTTT+TGG | - | chr2.1:15461272-15461291 | MS.gene35436:intron | 35.0% |
| !!! | ATCCCTTATTTTAGAGGGAA+AGG | + | chr2.1:15461796-15461815 | None:intergenic | 35.0% |
| !!! | CGATAGGTGGTTTTAAAACT+AGG | - | chr2.1:15459266-15459285 | MS.gene35436:intron | 35.0% |
| AAACTTGTGCCACAGCTATA+AGG | + | chr2.1:15461152-15461171 | None:intergenic | 40.0% | |
| AAAGACTTGTAGGAATGAGG+TGG | - | chr2.1:15458445-15458464 | MS.gene35436:intron | 40.0% | |
| AACAGTCTTCTCCCAAAAAG+CGG | - | chr2.1:15459139-15459158 | MS.gene35436:intron | 40.0% | |
| AACTTGTGCCACAGCTATAA+GGG | + | chr2.1:15461151-15461170 | None:intergenic | 40.0% | |
| AAGGAAAGGCTACTGAATGA+TGG | - | chr2.1:15463201-15463220 | MS.gene35436:CDS | 40.0% | |
| ACAGGAGTGATTTATGCAAC+CGG | - | chr2.1:15460687-15460706 | MS.gene35436:intron | 40.0% | |
| ACATGTTAGGAACTTCCACT+TGG | - | chr2.1:15461564-15461583 | MS.gene35436:intron | 40.0% | |
| ACTCGTATCTATGTTCAACG+TGG | - | chr2.1:15457578-15457597 | MS.gene35436:CDS | 40.0% | |
| AGAAAGGGCCCTATATAACT+TGG | - | chr2.1:15462412-15462431 | MS.gene35436:intron | 40.0% | |
| AGAGAGATCTCGACAACTAA+TGG | - | chr2.1:15461657-15461676 | MS.gene35436:intron | 40.0% | |
| AGTATGCTGGGAGTAGTAAT+AGG | - | chr2.1:15457777-15457796 | MS.gene35436:intron | 40.0% | |
| ATCAAACTAACCTCCCATCA+TGG | - | chr2.1:15459852-15459871 | MS.gene35436:intron | 40.0% | |
| ATGATGTTGTGGAGTATGCT+GGG | - | chr2.1:15457765-15457784 | MS.gene35436:intron | 40.0% | |
| ATGGTATTTGCATCCATGTC+AGG | - | chr2.1:15458820-15458839 | MS.gene35436:CDS | 40.0% | |
| CATATATACTCCTACTCCAC+AGG | - | chr2.1:15462003-15462022 | MS.gene35436:intron | 40.0% | |
| CCAAAAGACTTGTAGGAATG+AGG | - | chr2.1:15458442-15458461 | MS.gene35436:intron | 40.0% | |
| CGGTTTAAACAAAAAAGGGC+CGG | + | chr2.1:15460787-15460806 | None:intergenic | 40.0% | |
| GATCCTGCATTAACAGCATT+AGG | + | chr2.1:15458088-15458107 | None:intergenic | 40.0% | |
| GCAGATGAGCGTAGATTATA+TGG | - | chr2.1:15458982-15459001 | MS.gene35436:intron | 40.0% | |
| GGTGTAAACTAAATATGGGC+TGG | + | chr2.1:15460632-15460651 | None:intergenic | 40.0% | |
| GGTGTATTAATGTGAGTTGC+AGG | - | chr2.1:15462990-15463009 | MS.gene35436:CDS | 40.0% | |
| GGTTTAAACAAAAAAGGGCC+GGG | + | chr2.1:15460786-15460805 | None:intergenic | 40.0% | |
| GTAGTAGTGCAATAAACCAC+AGG | + | chr2.1:15460106-15460125 | None:intergenic | 40.0% | |
| GTATGCTGGGAGTAGTAATA+GGG | - | chr2.1:15457778-15457797 | MS.gene35436:intron | 40.0% | |
| GTTATCATAAGCTAGACCAG+AGG | + | chr2.1:15459793-15459812 | None:intergenic | 40.0% | |
| GTTGCTAAGGATGAAGAAAG+TGG | - | chr2.1:15457713-15457732 | MS.gene35436:CDS | 40.0% | |
| TAAGGATGAAGAAAGTGGAG+AGG | - | chr2.1:15457718-15457737 | MS.gene35436:CDS | 40.0% | |
| TAGGAATGAGGTGGATGATT+TGG | - | chr2.1:15458454-15458473 | MS.gene35436:intron | 40.0% | |
| TAGTTACCTACAAGCGATTG+AGG | - | chr2.1:15463103-15463122 | MS.gene35436:CDS | 40.0% | |
| TAGTTTGATTCACAGTCCAC+AGG | + | chr2.1:15459841-15459860 | None:intergenic | 40.0% | |
| TATCACAACCACAAAACCCA+GGG | + | chr2.1:15459181-15459200 | None:intergenic | 40.0% | |
| TCATAAGAGGACACATAGCA+TGG | + | chr2.1:15458235-15458254 | None:intergenic | 40.0% | |
| TCTCCTAATGCTGTTAATGC+AGG | - | chr2.1:15458082-15458101 | MS.gene35436:CDS | 40.0% | |
| TCTCTTCCTCTTACAGTATG+AGG | + | chr2.1:15460311-15460330 | None:intergenic | 40.0% | |
| TGAGGCATACAGCATATTTG+GGG | - | chr2.1:15463121-15463140 | MS.gene35436:CDS | 40.0% | |
| TGATGAAAACTTAGGCGTAC+TGG | + | chr2.1:15462154-15462173 | None:intergenic | 40.0% | |
| TGTAAGATAAGCTCTACCTG+TGG | + | chr2.1:15462022-15462041 | None:intergenic | 40.0% | |
| TTATCACAACCACAAAACCC+AGG | + | chr2.1:15459182-15459201 | None:intergenic | 40.0% | |
| ! | AATTCAAGAAGGAGTGCATC+GGG | - | chr2.1:15458058-15458077 | MS.gene35436:CDS | 40.0% |
| ! | AGATTCATATGGTCGGTTCT+TGG | - | chr2.1:15462924-15462943 | MS.gene35436:CDS | 40.0% |
| ! | ATATAGGGCCCTTTCTTTTG+GGG | + | chr2.1:15462408-15462427 | None:intergenic | 40.0% |
| ! | ATATGTTAACCCTTTCTGGC+AGG | - | chr2.1:15461924-15461943 | MS.gene35436:CDS | 40.0% |
| ! | CCTCATTCCTACAAGTCTTT+TGG | + | chr2.1:15458445-15458464 | None:intergenic | 40.0% |
| ! | GAAGTTTTCGTTGATCTTCC+TGG | - | chr2.1:15457872-15457891 | MS.gene35436:intron | 40.0% |
| ! | GTACGCCTAAGTTTTCATCA+TGG | - | chr2.1:15462154-15462173 | MS.gene35436:intron | 40.0% |
| ! | TGATTTCACGTCTTTAGGAG+CGG | - | chr2.1:15460245-15460264 | MS.gene35436:intron | 40.0% |
| ! | TTTTACAACTCCCTTCTGAC+AGG | - | chr2.1:15462656-15462675 | MS.gene35436:CDS | 40.0% |
| !! | GAGATATTAACTTGCTCCAG+AGG | + | chr2.1:15462844-15462863 | None:intergenic | 40.0% |
| !! | TGGTGGACTATAAGCTAACT+TGG | - | chr2.1:15462969-15462988 | MS.gene35436:CDS | 40.0% |
| !! | TTAGTTGATGAAGGCTTTGG+AGG | + | chr2.1:15458034-15458053 | None:intergenic | 40.0% |
| AACTAACCTCCCATCATGGT+AGG | - | chr2.1:15459856-15459875 | MS.gene35436:intron | 45.0% | |
| AAGAAGACCCAGCACGATTA+GGG | + | chr2.1:15457658-15457677 | None:intergenic | 45.0% | |
| AAGCTAGACCAGAGGAGAAA+TGG | + | chr2.1:15459785-15459804 | None:intergenic | 45.0% | |
| ACAGGTGCAATCTGTTGCTA+AGG | - | chr2.1:15457700-15457719 | MS.gene35436:CDS | 45.0% | |
| ACTGAATGAAGAGCGGAAAG+TGG | + | chr2.1:15460867-15460886 | None:intergenic | 45.0% | |
| AGAATTGGCGGGGATATACT+TGG | - | chr2.1:15461079-15461098 | MS.gene35436:intron | 45.0% | |
| AGCTAGACCAGAGGAGAAAT+GGG | + | chr2.1:15459784-15459803 | None:intergenic | 45.0% | |
| ATAAGCTCTACCTGTGGAGT+AGG | + | chr2.1:15462016-15462035 | None:intergenic | 45.0% | |
| CACGATTAGGGTTAGGGTTA+GGG | + | chr2.1:15457646-15457665 | None:intergenic | 45.0% | |
| CAGTAGCAGACGTAAAGGAA+AGG | - | chr2.1:15463187-15463206 | MS.gene35436:CDS | 45.0% | |
| CATGGCACAATGTAACTAGC+AGG | + | chr2.1:15460902-15460921 | None:intergenic | 45.0% | |
| CTGTTAATGCAGGATCACCA+AGG | - | chr2.1:15458092-15458111 | MS.gene35436:CDS | 45.0% | |
| CTTCACTTTCACTATGAGCC+CGG | + | chr2.1:15458186-15458205 | None:intergenic | 45.0% | |
| CTTGCTCACCCACTATATGA+AGG | - | chr2.1:15460012-15460031 | MS.gene35436:intron | 45.0% | |
| GAACAATCACAACCCACATC+TGG | + | chr2.1:15460757-15460776 | None:intergenic | 45.0% | |
| GAATTGGCGGGGATATACTT+GGG | - | chr2.1:15461080-15461099 | MS.gene35436:intron | 45.0% | |
| GAGGGTAATCCTGTTGTTAG+CGG | - | chr2.1:15457971-15457990 | MS.gene35436:CDS | 45.0% | |
| GATGATGTTGTGGAGTATGC+TGG | - | chr2.1:15457764-15457783 | MS.gene35436:CDS | 45.0% | |
| GCGGTATAAATGCAACCTCA+TGG | - | chr2.1:15459983-15460002 | MS.gene35436:intron | 45.0% | |
| GGAAATTGAACTTGCCGTGA+TGG | - | chr2.1:15462728-15462747 | MS.gene35436:CDS | 45.0% | |
| GGGCTCATAGTGAAAGTGAA+GGG | - | chr2.1:15458185-15458204 | MS.gene35436:intron | 45.0% | |
| GGTCAACAAGGGAGTTGTAA+TGG | + | chr2.1:15462183-15462202 | None:intergenic | 45.0% | |
| GTTTGCAAGAATCGAGGGAA+AGG | - | chr2.1:15457921-15457940 | MS.gene35436:intron | 45.0% | |
| TAAAACCACCTATCGCAGAC+TGG | + | chr2.1:15459261-15459280 | None:intergenic | 45.0% | |
| TAAACTCGCTTGCATCATCG+CGG | - | chr2.1:15458626-15458645 | MS.gene35436:CDS | 45.0% | |
| TAATCGTGCTGGGTCTTCTT+CGG | - | chr2.1:15457658-15457677 | MS.gene35436:CDS | 45.0% | |
| TCCCATAAACCTGCCAGAAA+GGG | + | chr2.1:15461936-15461955 | None:intergenic | 45.0% | |
| TCTTTCCCACTTTCCATCCT+GGG | + | chr2.1:15463032-15463051 | None:intergenic | 45.0% | |
| TGAAAACTTAGGCGTACTGG+TGG | + | chr2.1:15462151-15462170 | None:intergenic | 45.0% | |
| TGAGGGTTTGCAAGAATCGA+GGG | - | chr2.1:15457916-15457935 | MS.gene35436:intron | 45.0% | |
| TGATCTTGAGCTCACAGAGA+AGG | - | chr2.1:15462707-15462726 | MS.gene35436:CDS | 45.0% | |
| TGTATGCCTCAATCGCTTGT+AGG | + | chr2.1:15463112-15463131 | None:intergenic | 45.0% | |
| TTATATCCCCAGTTAGGCGA+GGG | - | chr2.1:15458339-15458358 | MS.gene35436:intron | 45.0% | |
| TTCACTAAGTCTATGCACGC+CGG | - | chr2.1:15459351-15459370 | MS.gene35436:intron | 45.0% | |
| TTCACTTTCACTATGAGCCC+GGG | + | chr2.1:15458185-15458204 | None:intergenic | 45.0% | |
| TTCCCATAAACCTGCCAGAA+AGG | + | chr2.1:15461937-15461956 | None:intergenic | 45.0% | |
| TTCTTTCCCACTTTCCATCC+TGG | + | chr2.1:15463033-15463052 | None:intergenic | 45.0% | |
| TTGAGGGTTTGCAAGAATCG+AGG | - | chr2.1:15457915-15457934 | MS.gene35436:intron | 45.0% | |
| TTGTGATTGTTCCCTTCTCC+CGG | - | chr2.1:15460765-15460784 | MS.gene35436:intron | 45.0% | |
| TTTATATCCCCAGTTAGGCG+AGG | - | chr2.1:15458338-15458357 | MS.gene35436:intron | 45.0% | |
| ! | AACCCTTTCTGGCAGGTTTA+TGG | - | chr2.1:15461931-15461950 | MS.gene35436:CDS | 45.0% |
| ! | ACCCTTTCTGGCAGGTTTAT+GGG | - | chr2.1:15461932-15461951 | MS.gene35436:CDS | 45.0% |
| ! | ATTCAAGAAGGAGTGCATCG+GGG | - | chr2.1:15458059-15458078 | MS.gene35436:CDS | 45.0% |
| ! | CATGAACAGCGTTGGAGATA+AGG | - | chr2.1:15459565-15459584 | MS.gene35436:intron | 45.0% |
| ! | GATTTCACGTCTTTAGGAGC+GGG | - | chr2.1:15460246-15460265 | MS.gene35436:intron | 45.0% |
| ! | TAGAATCCTACCATGATGGG+AGG | + | chr2.1:15459865-15459884 | None:intergenic | 45.0% |
| ! | TCATTCTGGTTACACTCCTG+TGG | - | chr2.1:15460087-15460106 | MS.gene35436:intron | 45.0% |
| !! | AGCTAAAAGTGCCTGTCAGA+AGG | + | chr2.1:15462670-15462689 | None:intergenic | 45.0% |
| !! | GCTAAAAGTGCCTGTCAGAA+GGG | + | chr2.1:15462669-15462688 | None:intergenic | 45.0% |
| !! | GGTTGTTGGTGATGATGTTG+TGG | - | chr2.1:15457754-15457773 | MS.gene35436:CDS | 45.0% |
| !! | TAACTTGCTCCAGAGGAAGA+TGG | + | chr2.1:15462837-15462856 | None:intergenic | 45.0% |
| !! | TGACAGGCACTTTTAGCTGA+GGG | - | chr2.1:15462672-15462691 | MS.gene35436:CDS | 45.0% |
| !!! | AATATTTTAATAGAATTAAA+AGG | + | chr2.1:15460192-15460211 | None:intergenic | 5.0% |
| AAACCTACGCCTGCATTTGC+TGG | - | chr2.1:15460388-15460407 | MS.gene35436:intron | 50.0% | |
| AACAAAAAAGGGCCGGGAGA+AGG | + | chr2.1:15460780-15460799 | None:intergenic | 50.0% | |
| AACAACTCCCTCGCCTAACT+GGG | + | chr2.1:15458349-15458368 | None:intergenic | 50.0% | |
| AACCCTAACCCTAATCGTGC+TGG | - | chr2.1:15457647-15457666 | MS.gene35436:CDS | 50.0% | |
| AACCTACGCCTGCATTTGCT+GGG | - | chr2.1:15460389-15460408 | MS.gene35436:intron | 50.0% | |
| AAGCCCTCGTTCTCTATCAC+TGG | + | chr2.1:15457947-15457966 | None:intergenic | 50.0% | |
| AAGGCCAGTGATAGAGAACG+AGG | - | chr2.1:15457940-15457959 | MS.gene35436:intron | 50.0% | |
| AATCCTGTTGTTAGCGGTGG+TGG | - | chr2.1:15457977-15457996 | MS.gene35436:CDS | 50.0% | |
| AATGCAGGATCACCAAGGAG+AGG | - | chr2.1:15458097-15458116 | MS.gene35436:CDS | 50.0% | |
| ACAAAAAAGGGCCGGGAGAA+GGG | + | chr2.1:15460779-15460798 | None:intergenic | 50.0% | |
| ACAACTCCCTTGTTGACCCA+CGG | - | chr2.1:15462185-15462204 | MS.gene35436:intron | 50.0% | |
| ACACTTGGTCTGCAACAGCA+CGG | + | chr2.1:15458931-15458950 | None:intergenic | 50.0% | |
| ACCCAGCACGATTAGGGTTA+GGG | + | chr2.1:15457652-15457671 | None:intergenic | 50.0% | |
| ACCCTAACCCTAATCGTGCT+GGG | - | chr2.1:15457648-15457667 | MS.gene35436:CDS | 50.0% | |
| ACCTTGTTCGCGATACGTGT+AGG | - | chr2.1:15458395-15458414 | MS.gene35436:intron | 50.0% | |
| AGGCCAGTGATAGAGAACGA+GGG | - | chr2.1:15457941-15457960 | MS.gene35436:intron | 50.0% | |
| AGTGATCCCAGGATGGAAAG+TGG | - | chr2.1:15463023-15463042 | MS.gene35436:CDS | 50.0% | |
| AGTTAGGCGAGGGAGTTGTT+AGG | - | chr2.1:15458349-15458368 | MS.gene35436:intron | 50.0% | |
| ATGTGAGTTGCAGGATCGTC+AGG | - | chr2.1:15462999-15463018 | MS.gene35436:CDS | 50.0% | |
| ATTCTGAGTCCCCGTACACT+TGG | + | chr2.1:15458946-15458965 | None:intergenic | 50.0% | |
| CCAAGTCCTGCACCAATTGT+GGG | + | chr2.1:15462214-15462233 | None:intergenic | 50.0% | |
| CCACAATTGGTGCAGGACTT+GGG | - | chr2.1:15462212-15462231 | MS.gene35436:intron | 50.0% | |
| CCTAAAAGCCCAGCAAATGC+AGG | + | chr2.1:15460400-15460419 | None:intergenic | 50.0% | |
| CGGGCTCATAGTGAAAGTGA+AGG | - | chr2.1:15458184-15458203 | MS.gene35436:intron | 50.0% | |
| CGGGGATATACTTGGGTCTT+TGG | - | chr2.1:15461087-15461106 | MS.gene35436:intron | 50.0% | |
| CGTATCGCGAACAAGGTCAT+TGG | + | chr2.1:15458392-15458411 | None:intergenic | 50.0% | |
| CTGTTGCAGACCAAGTGTAC+GGG | - | chr2.1:15458933-15458952 | MS.gene35436:intron | 50.0% | |
| GAACAATCAGAACCCACAGC+CGG | + | chr2.1:15460602-15460621 | None:intergenic | 50.0% | |
| GAACCCACAGCCGGATTAAT+TGG | + | chr2.1:15460593-15460612 | None:intergenic | 50.0% | |
| GAAGAAGACCCAGCACGATT+AGG | + | chr2.1:15457659-15457678 | None:intergenic | 50.0% | |
| GAGAAGACTGTTCAAACCCG+TGG | + | chr2.1:15459131-15459150 | None:intergenic | 50.0% | |
| GCACGATTAGGGTTAGGGTT+AGG | + | chr2.1:15457647-15457666 | None:intergenic | 50.0% | |
| GCTGTTGCAGACCAAGTGTA+CGG | - | chr2.1:15458932-15458951 | MS.gene35436:intron | 50.0% | |
| GCTTAAATGTACCACCGGCA+AGG | + | chr2.1:15462773-15462792 | None:intergenic | 50.0% | |
| GGATGAAGAAAGTGGAGAGG+AGG | - | chr2.1:15457721-15457740 | MS.gene35436:CDS | 50.0% | |
| GGTAATCCTGTTGTTAGCGG+TGG | - | chr2.1:15457974-15457993 | MS.gene35436:CDS | 50.0% | |
| GTCCTAGCCGAAACAACAAC+AGG | + | chr2.1:15458133-15458152 | None:intergenic | 50.0% | |
| GTGAGCAAGAAACGTCCATG+AGG | + | chr2.1:15460001-15460020 | None:intergenic | 50.0% | |
| GTGATCCCAGGATGGAAAGT+GGG | - | chr2.1:15463024-15463043 | MS.gene35436:CDS | 50.0% | |
| GTGCCAATTAATCCGGCTGT+GGG | - | chr2.1:15460587-15460606 | MS.gene35436:intron | 50.0% | |
| GTTCAACGTGGTTCTTCTGC+TGG | - | chr2.1:15457590-15457609 | MS.gene35436:CDS | 50.0% | |
| TAACAACTCCCTCGCCTAAC+TGG | + | chr2.1:15458350-15458369 | None:intergenic | 50.0% | |
| TCACTTTCACTATGAGCCCG+GGG | + | chr2.1:15458184-15458203 | None:intergenic | 50.0% | |
| TCATTCTGGTCACACTCCTG+TGG | - | chr2.1:15459944-15459963 | MS.gene35436:intron | 50.0% | |
| TCCTACACGTATCGCGAACA+AGG | + | chr2.1:15458399-15458418 | None:intergenic | 50.0% | |
| TGTCGCTCTCTTTCCTGACA+TGG | + | chr2.1:15458836-15458855 | None:intergenic | 50.0% | |
| TGTGCCAATTAATCCGGCTG+TGG | - | chr2.1:15460586-15460605 | MS.gene35436:intron | 50.0% | |
| TGTTGCAGACCAAGTGTACG+GGG | - | chr2.1:15458934-15458953 | MS.gene35436:intron | 50.0% | |
| TTGGGTTCAGCTCTCTTCGT+GGG | - | chr2.1:15462230-15462249 | MS.gene35436:intron | 50.0% | |
| ! | ATGAAGGTCCCTGGGTTTTG+TGG | - | chr2.1:15459170-15459189 | MS.gene35436:intron | 50.0% |
| ! | TAGGCGTACTGGTGGTGTAT+TGG | + | chr2.1:15462143-15462162 | None:intergenic | 50.0% |
| ! | TTGCCGTGATGGAAGCTTCT+CGG | - | chr2.1:15462739-15462758 | MS.gene35436:CDS | 50.0% |
| !! | AACTAAATATGGGCTGGGCG+AGG | + | chr2.1:15460626-15460645 | None:intergenic | 50.0% |
| !! | ACTAAATATGGGCTGGGCGA+GGG | + | chr2.1:15460625-15460644 | None:intergenic | 50.0% |
| !! | CCTGCATTTGCTGGGCTTTT+AGG | - | chr2.1:15460397-15460416 | MS.gene35436:intron | 50.0% |
| !! | CTGACAGGCACTTTTAGCTG+AGG | - | chr2.1:15462671-15462690 | MS.gene35436:CDS | 50.0% |
| !! | GACAGGCACTTTTAGCTGAG+GGG | - | chr2.1:15462673-15462692 | MS.gene35436:CDS | 50.0% |
| !! | GAGGAGCTTGGATTGGTTGT+TGG | - | chr2.1:15457740-15457759 | MS.gene35436:CDS | 50.0% |
| !! | GTTGATGAAGGCTTTGGAGG+TGG | + | chr2.1:15458031-15458050 | None:intergenic | 50.0% |
| !! | TGCGTGGCCTGTTGTTGTTT+CGG | - | chr2.1:15458123-15458142 | MS.gene35436:intron | 50.0% |
| AAATTCATGCTGCCAGCCCC+AGG | + | chr2.1:15459381-15459400 | None:intergenic | 55.0% | |
| ACAACTCCCTCGCCTAACTG+GGG | + | chr2.1:15458348-15458367 | None:intergenic | 55.0% | |
| ACTGCTGAGCCATCTTCCTC+TGG | - | chr2.1:15462825-15462844 | MS.gene35436:CDS | 55.0% | |
| AGAGAACGAGGGCTTGTGTG+AGG | - | chr2.1:15457952-15457971 | MS.gene35436:CDS | 55.0% | |
| AGCCCGAGAAGCTTCCATCA+CGG | + | chr2.1:15462745-15462764 | None:intergenic | 55.0% | |
| CACCTATCGCAGACTGGTAG+TGG | + | chr2.1:15459255-15459274 | None:intergenic | 55.0% | |
| CACTACCAGTCTGCGATAGG+TGG | - | chr2.1:15459253-15459272 | MS.gene35436:intron | 55.0% | |
| CCCAAGTCCTGCACCAATTG+TGG | + | chr2.1:15462215-15462234 | None:intergenic | 55.0% | |
| CCCACAATTGGTGCAGGACT+TGG | - | chr2.1:15462211-15462230 | MS.gene35436:intron | 55.0% | |
| CTTGGGTTCAGCTCTCTTCG+TGG | - | chr2.1:15462229-15462248 | MS.gene35436:intron | 55.0% | |
| GAAAGTGGAGAGGAGGAGCT+TGG | - | chr2.1:15457728-15457747 | MS.gene35436:CDS | 55.0% | |
| GACCCAGCACGATTAGGGTT+AGG | + | chr2.1:15457653-15457672 | None:intergenic | 55.0% | |
| GAGAACGAGGGCTTGTGTGA+GGG | - | chr2.1:15457953-15457972 | MS.gene35436:CDS | 55.0% | |
| GATCGTCAGGTAGTGATCCC+AGG | - | chr2.1:15463012-15463031 | MS.gene35436:CDS | 55.0% | |
| GGCAGCAGTAGCAGACGTAA+AGG | - | chr2.1:15463182-15463201 | MS.gene35436:CDS | 55.0% | |
| GGTCTGCAACAGCACGGAAA+AGG | + | chr2.1:15458925-15458944 | None:intergenic | 55.0% | |
| GTCAGGTAGTGATCCCAGGA+TGG | - | chr2.1:15463016-15463035 | MS.gene35436:CDS | 55.0% | |
| TCTCGGGCTGAATACCTTGC+CGG | - | chr2.1:15462756-15462775 | MS.gene35436:CDS | 55.0% | |
| TGCACCTGTGTAACGTGCTC+CGG | + | chr2.1:15457689-15457708 | None:intergenic | 55.0% | |
| TGCCACTACCAGTCTGCGAT+AGG | - | chr2.1:15459250-15459269 | MS.gene35436:intron | 55.0% | |
| TGGAGAGGAGGAGCTTGGAT+TGG | - | chr2.1:15457733-15457752 | MS.gene35436:CDS | 55.0% | |
| TGGGTTCAGCTCTCTTCGTG+GGG | - | chr2.1:15462231-15462250 | MS.gene35436:intron | 55.0% | |
| TTTGGAGGTGGAACAGGTGG+AGG | + | chr2.1:15458019-15458038 | None:intergenic | 55.0% | |
| ! | ACGTCTTTAGGAGCGGGAGA+GGG | - | chr2.1:15460252-15460271 | MS.gene35436:intron | 55.0% |
| ! | TGCCGTGATGGAAGCTTCTC+GGG | - | chr2.1:15462740-15462759 | MS.gene35436:CDS | 55.0% |
| !! | AGGCACTTTTAGCTGAGGGG+CGG | - | chr2.1:15462676-15462695 | MS.gene35436:CDS | 55.0% |
| !! | CTAAATATGGGCTGGGCGAG+GGG | + | chr2.1:15460624-15460643 | None:intergenic | 55.0% |
| !! | GAAGGCTTTGGAGGTGGAAC+AGG | + | chr2.1:15458025-15458044 | None:intergenic | 55.0% |
| !! | GGCCTGTTGTTGTTTCGGCT+AGG | - | chr2.1:15458128-15458147 | MS.gene35436:intron | 55.0% |
| AACTTGACGGCTGACGCTGC+TGG | - | chr2.1:15462632-15462651 | MS.gene35436:CDS | 60.0% | |
| AGCCCAGCAAATGCAGGCGT+AGG | + | chr2.1:15460394-15460413 | None:intergenic | 60.0% | |
| CACCAAGGAGAGGATCTGCG+TGG | - | chr2.1:15458107-15458126 | MS.gene35436:intron | 60.0% | |
| CACCAATTGTGGGACGCCGT+GGG | + | chr2.1:15462204-15462223 | None:intergenic | 60.0% | |
| CAGCTGGCCCATTTCTCCTC+TGG | - | chr2.1:15459774-15459793 | MS.gene35436:intron | 60.0% | |
| CCACCACCACCGCTAACAAC+AGG | + | chr2.1:15457983-15458002 | None:intergenic | 60.0% | |
| CTATGAGCCCGGGGAGATGA+AGG | + | chr2.1:15458175-15458194 | None:intergenic | 60.0% | |
| CTATGCACGCCGGAATGCCT+GGG | - | chr2.1:15459361-15459380 | MS.gene35436:intron | 60.0% | |
| GATGAAGGTCGAGACCCAGC+AGG | + | chr2.1:15458160-15458179 | None:intergenic | 60.0% | |
| GGTCTCGACCTTCATCTCCC+CGG | - | chr2.1:15458164-15458183 | MS.gene35436:intron | 60.0% | |
| GTCTCGACCTTCATCTCCCC+GGG | - | chr2.1:15458165-15458184 | MS.gene35436:intron | 60.0% | |
| TATGCACGCCGGAATGCCTG+GGG | - | chr2.1:15459362-15459381 | MS.gene35436:intron | 60.0% | |
| TCTATGCACGCCGGAATGCC+TGG | - | chr2.1:15459360-15459379 | MS.gene35436:intron | 60.0% | |
| ! | CACGTCTTTAGGAGCGGGAG+AGG | - | chr2.1:15460251-15460270 | MS.gene35436:intron | 60.0% |
| ! | CCTGTTGTTAGCGGTGGTGG+TGG | - | chr2.1:15457980-15457999 | MS.gene35436:CDS | 60.0% |
| !! | GGCTTTGGAGGTGGAACAGG+TGG | + | chr2.1:15458022-15458041 | None:intergenic | 60.0% |
| CCTGTGTAACGTGCTCCGGC+CGG | + | chr2.1:15457685-15457704 | None:intergenic | 65.0% | |
| CGGCGTCCCACAATTGGTGC+AGG | - | chr2.1:15462205-15462224 | MS.gene35436:intron | 65.0% | |
| CGGCTAGGACTTCGCCTGCT+GGG | - | chr2.1:15458143-15458162 | MS.gene35436:intron | 65.0% | |
| CGGGCTGAATACCTTGCCGG+TGG | - | chr2.1:15462759-15462778 | MS.gene35436:CDS | 65.0% | |
| CTGTGTAACGTGCTCCGGCC+GGG | + | chr2.1:15457684-15457703 | None:intergenic | 65.0% | |
| GACCCACGGCGTCCCACAAT+TGG | - | chr2.1:15462199-15462218 | MS.gene35436:intron | 65.0% | |
| GCACCAATTGTGGGACGCCG+TGG | + | chr2.1:15462205-15462224 | None:intergenic | 65.0% | |
| GGAGGTGGAACAGGTGGAGG+TGG | + | chr2.1:15458016-15458035 | None:intergenic | 65.0% | |
| GGCCACGCAGATCCTCTCCT+TGG | + | chr2.1:15458112-15458131 | None:intergenic | 65.0% | |
| GGGACGCCGTGGGTCAACAA+GGG | + | chr2.1:15462194-15462213 | None:intergenic | 65.0% | |
| GGTGGAACAGGTGGAGGTGG+AGG | + | chr2.1:15458013-15458032 | None:intergenic | 65.0% | |
| GTGCTGGGTCTTCTTCGGCC+CGG | - | chr2.1:15457663-15457682 | MS.gene35436:CDS | 65.0% | |
| TCGGCTAGGACTTCGCCTGC+TGG | - | chr2.1:15458142-15458161 | MS.gene35436:intron | 65.0% | |
| TGGGACGCCGTGGGTCAACA+AGG | + | chr2.1:15462195-15462214 | None:intergenic | 65.0% | |
| CCGGCCGGAGCACGTTACAC+AGG | - | chr2.1:15457682-15457701 | MS.gene35436:CDS | 70.0% | |
| GCTGCCAGCCCCAGGCATTC+CGG | + | chr2.1:15459373-15459392 | None:intergenic | 70.0% | |
| TGGGTCTTCTTCGGCCCGGC+CGG | - | chr2.1:15457667-15457686 | MS.gene35436:CDS | 70.0% | |
| CACGCCGGAATGCCTGGGGC+TGG | - | chr2.1:15459366-15459385 | MS.gene35436:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 15457575 | 15463220 | 15457575 | ID=MS.gene35436 |
| chr2.1 | mRNA | 15457575 | 15463220 | 15457575 | ID=MS.gene35436.t1;Parent=MS.gene35436 |
| chr2.1 | exon | 15462534 | 15463220 | 15462534 | ID=MS.gene35436.t1.exon1;Parent=MS.gene35436.t1 |
| chr2.1 | CDS | 15462534 | 15463220 | 15462534 | ID=cds.MS.gene35436.t1;Parent=MS.gene35436.t1 |
| chr2.1 | exon | 15461792 | 15461953 | 15461792 | ID=MS.gene35436.t1.exon2;Parent=MS.gene35436.t1 |
| chr2.1 | CDS | 15461792 | 15461953 | 15461792 | ID=cds.MS.gene35436.t1;Parent=MS.gene35436.t1 |
| chr2.1 | exon | 15460456 | 15460533 | 15460456 | ID=MS.gene35436.t1.exon3;Parent=MS.gene35436.t1 |
| chr2.1 | CDS | 15460456 | 15460533 | 15460456 | ID=cds.MS.gene35436.t1;Parent=MS.gene35436.t1 |
| chr2.1 | exon | 15458771 | 15458849 | 15458771 | ID=MS.gene35436.t1.exon4;Parent=MS.gene35436.t1 |
| chr2.1 | CDS | 15458771 | 15458849 | 15458771 | ID=cds.MS.gene35436.t1;Parent=MS.gene35436.t1 |
| chr2.1 | exon | 15458543 | 15458688 | 15458543 | ID=MS.gene35436.t1.exon5;Parent=MS.gene35436.t1 |
| chr2.1 | CDS | 15458543 | 15458688 | 15458543 | ID=cds.MS.gene35436.t1;Parent=MS.gene35436.t1 |
| chr2.1 | exon | 15458221 | 15458286 | 15458221 | ID=MS.gene35436.t1.exon6;Parent=MS.gene35436.t1 |
| chr2.1 | CDS | 15458221 | 15458286 | 15458221 | ID=cds.MS.gene35436.t1;Parent=MS.gene35436.t1 |
| chr2.1 | exon | 15457943 | 15458117 | 15457943 | ID=MS.gene35436.t1.exon7;Parent=MS.gene35436.t1 |
| chr2.1 | CDS | 15457943 | 15458117 | 15457943 | ID=cds.MS.gene35436.t1;Parent=MS.gene35436.t1 |
| chr2.1 | exon | 15457575 | 15457783 | 15457575 | ID=MS.gene35436.t1.exon8;Parent=MS.gene35436.t1 |
| chr2.1 | CDS | 15457575 | 15457783 | 15457575 | ID=cds.MS.gene35436.t1;Parent=MS.gene35436.t1 |
| Gene Sequence |
| Protein sequence |
