Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35826.t1 | XP_003596974.1 | 98 | 347 | 7 | 0 | 3 | 349 | 4 | 350 | 7.10E-191 | 676.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35826.t1 | Q9SLN8 | 41.5 | 349 | 193 | 7 | 1 | 347 | 1 | 340 | 2.9e-68 | 260.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35826.t1 | G7ITY1 | 98.0 | 347 | 7 | 0 | 3 | 349 | 4 | 350 | 5.1e-191 | 676.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049341 | MS.gene35826 | 0.803438 | 3.49E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene35826 | 0.822784 | 1.97E-53 | -1.69E-46 |
| MS.gene049653 | MS.gene35826 | 0.818038 | 2.42E-52 | -1.69E-46 |
| MS.gene049756 | MS.gene35826 | 0.802125 | 6.51E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene35826 | 0.85259 | 4.18E-61 | -1.69E-46 |
| MS.gene051245 | MS.gene35826 | 0.822836 | 1.91E-53 | -1.69E-46 |
| MS.gene051757 | MS.gene35826 | 0.812092 | 5.04E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene35826 | 0.801302 | 9.60E-49 | -1.69E-46 |
| MS.gene052286 | MS.gene35826 | 0.834934 | 2.25E-56 | -1.69E-46 |
| MS.gene052302 | MS.gene35826 | 0.846016 | 2.83E-59 | -1.69E-46 |
| MS.gene052376 | MS.gene35826 | 0.850995 | 1.18E-60 | -1.69E-46 |
| MS.gene052856 | MS.gene35826 | 0.812167 | 4.86E-51 | -1.69E-46 |
| MS.gene052858 | MS.gene35826 | 0.802918 | 4.47E-49 | -1.69E-46 |
| MS.gene053188 | MS.gene35826 | 0.827667 | 1.38E-54 | -1.69E-46 |
| MS.gene053216 | MS.gene35826 | 0.855272 | 7.05E-62 | -1.69E-46 |
| MS.gene054537 | MS.gene35826 | 0.830339 | 3.11E-55 | -1.69E-46 |
| MS.gene05510 | MS.gene35826 | 0.818441 | 1.96E-52 | -1.69E-46 |
| MS.gene055441 | MS.gene35826 | 0.820474 | 6.73E-53 | -1.69E-46 |
| MS.gene056760 | MS.gene35826 | 0.812315 | 4.51E-51 | -1.69E-46 |
| MS.gene057079 | MS.gene35826 | 0.811649 | 6.30E-51 | -1.69E-46 |
| MS.gene057140 | MS.gene35826 | 0.823535 | 1.31E-53 | -1.69E-46 |
| MS.gene057234 | MS.gene35826 | 0.829274 | 5.64E-55 | -1.69E-46 |
| MS.gene057754 | MS.gene35826 | 0.808075 | 3.70E-50 | -1.69E-46 |
| MS.gene05795 | MS.gene35826 | 0.828998 | 6.58E-55 | -1.69E-46 |
| MS.gene058054 | MS.gene35826 | 0.816835 | 4.51E-52 | -1.69E-46 |
| MS.gene058055 | MS.gene35826 | 0.845806 | 3.23E-59 | -1.69E-46 |
| MS.gene058238 | MS.gene35826 | 0.838302 | 3.12E-57 | -1.69E-46 |
| MS.gene058906 | MS.gene35826 | 0.803071 | 4.15E-49 | -1.69E-46 |
| MS.gene059317 | MS.gene35826 | 0.935686 | 5.74E-97 | -1.69E-46 |
| MS.gene060297 | MS.gene35826 | 0.8061 | 9.69E-50 | -1.69E-46 |
| MS.gene060586 | MS.gene35826 | 0.807321 | 5.35E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35826.t1 | MTR_2g088220 | 97.983 | 347 | 7 | 0 | 3 | 349 | 4 | 350 | 0.0 | 696 |
| MS.gene35826.t1 | MTR_2g088190 | 85.100 | 349 | 52 | 0 | 1 | 349 | 1 | 349 | 0.0 | 614 |
| MS.gene35826.t1 | MTR_2g088200 | 84.857 | 350 | 52 | 1 | 1 | 349 | 1 | 350 | 0.0 | 588 |
| MS.gene35826.t1 | MTR_8g010030 | 39.766 | 342 | 201 | 4 | 6 | 347 | 5 | 341 | 1.77e-82 | 254 |
| MS.gene35826.t1 | MTR_7g406860 | 39.394 | 330 | 196 | 3 | 18 | 347 | 18 | 343 | 1.03e-79 | 247 |
| MS.gene35826.t1 | MTR_8g009820 | 42.197 | 346 | 188 | 8 | 5 | 347 | 63 | 399 | 1.05e-78 | 246 |
| MS.gene35826.t1 | MTR_8g009980 | 41.210 | 347 | 191 | 8 | 5 | 347 | 4 | 341 | 1.61e-78 | 244 |
| MS.gene35826.t1 | MTR_8g010020 | 46.642 | 268 | 139 | 3 | 80 | 347 | 46 | 309 | 1.66e-76 | 238 |
| MS.gene35826.t1 | MTR_8g009830 | 40.230 | 348 | 191 | 10 | 5 | 347 | 4 | 339 | 3.46e-74 | 233 |
| MS.gene35826.t1 | MTR_8g009840 | 40.870 | 345 | 190 | 10 | 1 | 342 | 1 | 334 | 1.10e-71 | 232 |
| MS.gene35826.t1 | MTR_0011s0280 | 34.985 | 343 | 214 | 5 | 7 | 345 | 4 | 341 | 9.94e-71 | 224 |
| MS.gene35826.t1 | MTR_8g010000 | 36.443 | 343 | 188 | 5 | 5 | 347 | 4 | 316 | 1.76e-65 | 210 |
| MS.gene35826.t1 | MTR_4g082970 | 37.931 | 348 | 201 | 8 | 5 | 347 | 10 | 347 | 1.19e-64 | 209 |
| MS.gene35826.t1 | MTR_8g007325 | 38.288 | 222 | 127 | 7 | 5 | 223 | 4 | 218 | 8.49e-37 | 132 |
| MS.gene35826.t1 | MTR_5g095030 | 40.157 | 127 | 74 | 1 | 221 | 347 | 11 | 135 | 6.73e-28 | 106 |
| MS.gene35826.t1 | MTR_4g086410 | 34.450 | 209 | 131 | 4 | 143 | 347 | 416 | 622 | 1.02e-25 | 108 |
| MS.gene35826.t1 | MTR_4g086400 | 33.971 | 209 | 132 | 4 | 143 | 347 | 276 | 482 | 1.01e-24 | 105 |
| MS.gene35826.t1 | MTR_4g086400 | 33.971 | 209 | 132 | 4 | 143 | 347 | 416 | 622 | 1.87e-24 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35826.t1 | AT5G16970 | 40.751 | 346 | 192 | 8 | 7 | 347 | 5 | 342 | 5.85e-80 | 248 |
| MS.gene35826.t1 | AT1G65560 | 41.525 | 354 | 193 | 8 | 1 | 347 | 1 | 347 | 2.07e-79 | 247 |
| MS.gene35826.t1 | AT5G16990 | 40.541 | 333 | 187 | 7 | 19 | 347 | 15 | 340 | 2.17e-76 | 239 |
| MS.gene35826.t1 | AT5G17000 | 41.846 | 325 | 179 | 6 | 26 | 347 | 25 | 342 | 8.22e-76 | 237 |
| MS.gene35826.t1 | AT3G03080 | 40.058 | 347 | 196 | 7 | 5 | 347 | 9 | 347 | 5.18e-75 | 235 |
| MS.gene35826.t1 | AT1G26320 | 39.067 | 343 | 196 | 7 | 5 | 342 | 9 | 343 | 6.52e-74 | 233 |
| MS.gene35826.t1 | AT5G37980 | 39.521 | 334 | 191 | 5 | 19 | 347 | 23 | 350 | 2.41e-73 | 231 |
| MS.gene35826.t1 | AT5G37940 | 38.922 | 334 | 193 | 5 | 19 | 347 | 23 | 350 | 3.12e-73 | 231 |
| MS.gene35826.t1 | AT5G38000 | 38.323 | 334 | 195 | 5 | 19 | 347 | 23 | 350 | 3.08e-71 | 226 |
| MS.gene35826.t1 | AT5G16960 | 41.776 | 304 | 170 | 5 | 47 | 347 | 44 | 343 | 3.25e-71 | 226 |
| MS.gene35826.t1 | AT5G16960 | 41.776 | 304 | 170 | 5 | 47 | 347 | 44 | 343 | 3.25e-71 | 226 |
| MS.gene35826.t1 | AT1G65560 | 45.556 | 270 | 143 | 3 | 80 | 347 | 4 | 271 | 2.02e-70 | 221 |
| MS.gene35826.t1 | AT1G26320 | 38.484 | 343 | 193 | 8 | 5 | 342 | 9 | 338 | 2.17e-70 | 223 |
| MS.gene35826.t1 | AT5G38000 | 38.199 | 322 | 188 | 5 | 19 | 335 | 23 | 338 | 2.17e-67 | 216 |
| MS.gene35826.t1 | AT5G16980 | 46.789 | 218 | 114 | 1 | 130 | 347 | 21 | 236 | 1.43e-66 | 210 |
| MS.gene35826.t1 | AT5G16980 | 46.789 | 218 | 114 | 1 | 130 | 347 | 21 | 236 | 1.43e-66 | 210 |
| MS.gene35826.t1 | AT5G16980 | 46.789 | 218 | 114 | 1 | 130 | 347 | 87 | 302 | 5.41e-66 | 211 |
| MS.gene35826.t1 | AT3G59845 | 36.857 | 350 | 213 | 6 | 1 | 347 | 1 | 345 | 2.74e-64 | 207 |
| MS.gene35826.t1 | AT5G38000 | 36.228 | 334 | 183 | 6 | 19 | 347 | 23 | 331 | 2.72e-60 | 197 |
| MS.gene35826.t1 | AT3G59845 | 43.460 | 237 | 131 | 2 | 111 | 347 | 10 | 243 | 4.81e-59 | 191 |
| MS.gene35826.t1 | AT5G17000 | 41.089 | 202 | 111 | 5 | 26 | 224 | 25 | 221 | 3.45e-37 | 134 |
| MS.gene35826.t1 | AT1G49670 | 32.701 | 211 | 132 | 6 | 143 | 347 | 412 | 618 | 3.97e-22 | 97.8 |
| MS.gene35826.t1 | AT1G49670 | 33.503 | 197 | 121 | 6 | 157 | 347 | 449 | 641 | 1.10e-20 | 93.6 |
Find 89 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCGGAATTGAAGGCTTTC+TGG | 0.136264 | 2.2:+11031214 | MS.gene35826:CDS |
| TCTGATTATCTTGGTTCTTT+AGG | 0.147688 | 2.2:+11028727 | MS.gene35826:CDS |
| AAGCTTATTAAAGAGGAATT+TGG | 0.213165 | 2.2:+11030176 | MS.gene35826:CDS |
| ATTTCTTTGTCTGATTATCT+TGG | 0.289511 | 2.2:+11028718 | MS.gene35826:CDS |
| CACTTAATTGCAGGAGTTCC+GGG | 0.295934 | 2.2:+11028941 | MS.gene35826:intron |
| ACACTTAATTGCAGGAGTTC+CGG | 0.310462 | 2.2:+11028940 | MS.gene35826:intron |
| TATTCAGCAACTGGAGCATT+TGG | 0.312141 | 2.2:-11028643 | None:intergenic |
| AATACATTTGATCCTGGCTT+TGG | 0.334066 | 2.2:-11029001 | None:intergenic |
| TGTAAGGAATCTTCTGAATA+TGG | 0.335753 | 2.2:+11031067 | MS.gene35826:CDS |
| GAATCATATTGGCATCGTTT+TGG | 0.344956 | 2.2:+11031125 | MS.gene35826:CDS |
| ATTCCTTACACCTTCTCTTT+CGG | 0.360485 | 2.2:-11031054 | None:intergenic |
| TTACAGTATTTGCAGTTGTA+AGG | 0.367660 | 2.2:+11028569 | MS.gene35826:CDS |
| AGTTCCGGGGTTTGCAGCAT+GGG | 0.383168 | 2.2:+11028955 | MS.gene35826:CDS |
| AAAAGTTGTTGTTCAAGTTA+AGG | 0.388021 | 2.2:+11031274 | MS.gene35826:CDS |
| TCCGTTGACCCTTATCTTCG+TGG | 0.403886 | 2.2:+11028409 | MS.gene35826:CDS |
| TGACGGATTCAACTACAATA+AGG | 0.420365 | 2.2:+11030205 | MS.gene35826:CDS |
| AATGTTAGAGCTGGAGAATA+AGG | 0.422916 | 2.2:-11031249 | None:intergenic |
| GGTGGGAAAGCAGGTGAGGA+TGG | 0.429416 | 2.2:+11031088 | MS.gene35826:CDS |
| ACAATACTATATTCAGCAAC+TGG | 0.430511 | 2.2:-11028652 | None:intergenic |
| TCCGGGGTTTGCAGCATGGG+TGG | 0.432098 | 2.2:+11028958 | MS.gene35826:CDS |
| TCAAAGAATAAAATAAATAT+CGG | 0.432706 | 2.2:+11031197 | MS.gene35826:CDS |
| TGTAGGGTCATCGGCAGTAC+TGG | 0.437208 | 2.2:+11029085 | MS.gene35826:CDS |
| TTAGGTGAAGCTTATTAAAG+AGG | 0.443550 | 2.2:+11030169 | MS.gene35826:intron |
| AAAATAAATATCGGAATTGA+AGG | 0.446788 | 2.2:+11031206 | MS.gene35826:CDS |
| GAGTTCCGGGGTTTGCAGCA+TGG | 0.454566 | 2.2:+11028954 | MS.gene35826:CDS |
| CAGTACTGGCTCTGATGATA+AGG | 0.456203 | 2.2:+11029099 | MS.gene35826:CDS |
| TCAACTGCCAGATGGTTGTC+CGG | 0.459003 | 2.2:-11028373 | None:intergenic |
| GTGATTCTTCCACGAAGATA+AGG | 0.461973 | 2.2:-11028418 | None:intergenic |
| TTCAATCCCGGACAACCATC+TGG | 0.469178 | 2.2:+11028366 | MS.gene35826:CDS |
| TGCAGCATGGGTGGGAATAG+AGG | 0.473520 | 2.2:+11028967 | MS.gene35826:CDS |
| TTCTAGCATGCTTGTTGACA+TGG | 0.473843 | 2.2:-11030863 | None:intergenic |
| TTTCTAGTTATTTGAGAAGA+GGG | 0.479888 | 2.2:-11028676 | None:intergenic |
| CATGCTAGAATACCTCTTTG+TGG | 0.481113 | 2.2:+11030876 | MS.gene35826:CDS |
| GTATTCATATCTGCTGCATC+TGG | 0.483168 | 2.2:+11029019 | MS.gene35826:CDS |
| TTATTCTCCAGCTCTAACAT+TGG | 0.488548 | 2.2:+11031251 | MS.gene35826:CDS |
| TCTGAATATGGTGGGAAAGC+AGG | 0.489876 | 2.2:+11031079 | MS.gene35826:CDS |
| CCGGGGTTTGCAGCATGGGT+GGG | 0.490309 | 2.2:+11028959 | MS.gene35826:CDS |
| GGTTGTCCGGGATTGAATCA+TGG | 0.493595 | 2.2:-11028360 | None:intergenic |
| TTGCTAAGATCCGAGGATGT+AGG | 0.493652 | 2.2:+11029068 | MS.gene35826:CDS |
| GGGAAAGCAGGTGAGGATGG+AGG | 0.496125 | 2.2:+11031091 | MS.gene35826:CDS |
| CAACTGCCAGATGGTTGTCC+GGG | 0.496423 | 2.2:-11028372 | None:intergenic |
| TGATTCTTCCACGAAGATAA+GGG | 0.498487 | 2.2:-11028417 | None:intergenic |
| GGAAAGCAGGTGAGGATGGA+GGG | 0.498509 | 2.2:+11031092 | MS.gene35826:CDS |
| GATATGAATACATTTGATCC+TGG | 0.509392 | 2.2:-11029007 | None:intergenic |
| GTACTAGCAGATCCAAAGCC+AGG | 0.512860 | 2.2:+11028989 | MS.gene35826:CDS |
| TGCTAAGATCCGAGGATGTA+GGG | 0.515236 | 2.2:+11029069 | MS.gene35826:CDS |
| TACAGTATTTGCAGTTGTAA+GGG | 0.519664 | 2.2:+11028570 | MS.gene35826:CDS |
| TTCACAATATCAACTTAATG+AGG | 0.524883 | 2.2:+11028465 | MS.gene35826:CDS |
| TATCTTCGTGGAAGAATCAC+TGG | 0.528184 | 2.2:+11028421 | MS.gene35826:CDS |
| GAGGAATTTGGATATGATGA+CGG | 0.530760 | 2.2:+11030188 | MS.gene35826:CDS |
| TCTTGCCCATGATTCAATCC+CGG | 0.532637 | 2.2:+11028354 | MS.gene35826:CDS |
| GTTGTCCGGGATTGAATCAT+GGG | 0.535361 | 2.2:-11028359 | None:intergenic |
| AAGTGATAGAAAGCAGAGAA+TGG | 0.535470 | 2.2:+11028260 | MS.gene35826:CDS |
| AAGTAAACATCAATACCATC+AGG | 0.538763 | 2.2:-11030801 | None:intergenic |
| GATAAGGGTCAACGGAGAGA+AGG | 0.541178 | 2.2:-11028402 | None:intergenic |
| GGACCGAAAGAGAAGGTGTA+AGG | 0.543024 | 2.2:+11031051 | MS.gene35826:CDS |
| TGCCGATGACCCTACATCCT+CGG | 0.545063 | 2.2:-11029078 | None:intergenic |
| ATCCGAGGATGTAGGGTCAT+CGG | 0.553113 | 2.2:+11029076 | MS.gene35826:CDS |
| GATGTTTACTTTGACAATGT+TGG | 0.555848 | 2.2:+11030813 | MS.gene35826:CDS |
| CAAGAGAAAGAGAGACAGTA+CGG | 0.556497 | 2.2:-11028336 | None:intergenic |
| AGTTTGAGATGATCTGAGGT+TGG | 0.559656 | 2.2:-11028313 | None:intergenic |
| CCCACCCATGCTGCAAACCC+CGG | 0.564167 | 2.2:-11028959 | None:intergenic |
| AGAAAGCAGAGAATGGTACT+TGG | 0.573824 | 2.2:+11028267 | MS.gene35826:CDS |
| AGGAATCTTCTGAATATGGT+GGG | 0.577910 | 2.2:+11031071 | MS.gene35826:CDS |
| GTTTACTTTGACAATGTTGG+TGG | 0.578811 | 2.2:+11030816 | MS.gene35826:CDS |
| AGAATCACTGGTACCTCAGA+AGG | 0.578814 | 2.2:+11028433 | MS.gene35826:CDS |
| AAGATACTTGCAAGAAGGCA+AGG | 0.579146 | 2.2:+11031169 | MS.gene35826:CDS |
| TGAAATGAAAAGACCTTCTG+AGG | 0.585073 | 2.2:-11028446 | None:intergenic |
| ATCCTCGGATCTTAGCAAGC+TGG | 0.586327 | 2.2:-11029063 | None:intergenic |
| GGTGCTGTCGGTATAAATGC+TGG | 0.589183 | 2.2:+11029040 | MS.gene35826:CDS |
| AAGGATAGTAAATACAGTGA+GGG | 0.594157 | 2.2:+11028604 | MS.gene35826:CDS |
| TCTGCTGCATCTGGTGCTGT+CGG | 0.598213 | 2.2:+11029028 | MS.gene35826:CDS |
| ATGGAAAGATACTTGCAAGA+AGG | 0.598508 | 2.2:+11031164 | MS.gene35826:CDS |
| TTGGCTGAATATTGTACTGA+AGG | 0.602772 | 2.2:+11028286 | MS.gene35826:CDS |
| AAGGAATCTTCTGAATATGG+TGG | 0.603584 | 2.2:+11031070 | MS.gene35826:CDS |
| TGAGATATCATTCCACAAAG+AGG | 0.604157 | 2.2:-11030888 | None:intergenic |
| AGGATAGTAAATACAGTGAG+GGG | 0.615694 | 2.2:+11028605 | MS.gene35826:CDS |
| GGATTACTACTTGCTTAAAG+CGG | 0.621637 | 2.2:-11030243 | None:intergenic |
| GGAGAGTCTCAACTGCCAGA+TGG | 0.626678 | 2.2:-11028381 | None:intergenic |
| ACTTAATTGCAGGAGTTCCG+GGG | 0.626738 | 2.2:+11028942 | MS.gene35826:intron |
| TGTAAGGGTGATCAGATCGA+AGG | 0.628532 | 2.2:+11028585 | MS.gene35826:CDS |
| TCCACGAAGATAAGGGTCAA+CGG | 0.631150 | 2.2:-11028410 | None:intergenic |
| GAAGGATAGTAAATACAGTG+AGG | 0.633548 | 2.2:+11028603 | MS.gene35826:CDS |
| TAGGTTTGGACCGAAAGAGA+AGG | 0.636182 | 2.2:+11031044 | MS.gene35826:intron |
| ACGGAGTTTGAGATGATCTG+AGG | 0.638833 | 2.2:-11028317 | None:intergenic |
| GGCCAGCTTGCTAAGATCCG+AGG | 0.644071 | 2.2:+11029061 | MS.gene35826:CDS |
| GGATAGTAAATACAGTGAGG+GGG | 0.664890 | 2.2:+11028606 | MS.gene35826:CDS |
| AATGATATCTCAATATAACA+AGG | 0.689353 | 2.2:+11030899 | MS.gene35826:CDS |
| ATATGGTGGGAAAGCAGGTG+AGG | 0.703418 | 2.2:+11031084 | MS.gene35826:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATATAAGATTTATTAG+GGG | - | chr2.2:11028785-11028804 | None:intergenic | 10.0% |
| !! | TCAAAGAATAAAATAAATAT+CGG | + | chr2.2:11031197-11031216 | MS.gene35826:CDS | 10.0% |
| !! | TTTGTTCATTTAATAAATTA+TGG | - | chr2.2:11030985-11031004 | None:intergenic | 10.0% |
| !!! | AATTCATTTTATATATTTGT+AGG | + | chr2.2:11028543-11028562 | MS.gene35826:intron | 10.0% |
| !! | GAAAAACTAAAATATTTAAC+TGG | - | chr2.2:11030731-11030750 | None:intergenic | 15.0% |
| !! | TTATATAGCAATATTTGTAA+AGG | - | chr2.2:11030294-11030313 | None:intergenic | 15.0% |
| !! | TTTATTAAATGAACAAACTT+CGG | + | chr2.2:11030988-11031007 | MS.gene35826:intron | 15.0% |
| !!! | ACAATTTATTTTGGTTTTTT+AGG | + | chr2.2:11030151-11030170 | MS.gene35826:intron | 15.0% |
| !!! | TTACAAGTTACAATTTATTT+TGG | + | chr2.2:11030142-11030161 | MS.gene35826:intron | 15.0% |
| !! | AAAATAAATATCGGAATTGA+AGG | + | chr2.2:11031206-11031225 | MS.gene35826:CDS | 20.0% |
| !! | AATATTGCTATATAAATGCA+AGG | + | chr2.2:11030299-11030318 | MS.gene35826:intron | 20.0% |
| !! | AATGATATCTCAATATAACA+AGG | + | chr2.2:11030899-11030918 | MS.gene35826:CDS | 20.0% |
| !! | AATTGTTATAATGTTGTCAT+AGG | + | chr2.2:11031025-11031044 | MS.gene35826:intron | 20.0% |
| !! | CAAAGGAAAAAAAAGTTATT+TGG | + | chr2.2:11029304-11029323 | MS.gene35826:intron | 20.0% |
| !! | GACAAAAATTAAGAAATGAT+AGG | - | chr2.2:11029128-11029147 | None:intergenic | 20.0% |
| !! | TTAGACAAATAAACAATGAA+AGG | + | chr2.2:11029669-11029688 | MS.gene35826:intron | 20.0% |
| !! | TTTATTTGTCTAAGAATATG+TGG | - | chr2.2:11029662-11029681 | None:intergenic | 20.0% |
| !!! | ACTTTTTTTACTTCTTATGA+TGG | - | chr2.2:11030330-11030349 | None:intergenic | 20.0% |
| !!! | AGATTACATGTTTTTTAATG+AGG | - | chr2.2:11029478-11029497 | None:intergenic | 20.0% |
| !!! | CTTTTTTTACTTCTTATGAT+GGG | - | chr2.2:11030329-11030348 | None:intergenic | 20.0% |
| !!! | TAAGTGTATCACATTAATTT+TGG | - | chr2.2:11028927-11028946 | None:intergenic | 20.0% |
| !!! | TATTTAGACTAGAATTTTAC+AGG | + | chr2.2:11030772-11030791 | MS.gene35826:intron | 20.0% |
| !!! | TGATTAATCTAAAACAACAA+AGG | + | chr2.2:11029287-11029306 | MS.gene35826:intron | 20.0% |
| ! | AAGCTTATTAAAGAGGAATT+TGG | + | chr2.2:11030176-11030195 | MS.gene35826:CDS | 25.0% |
| ! | AAGTAAACAAGATGAAAATG+TGG | - | chr2.2:11029606-11029625 | None:intergenic | 25.0% |
| ! | ACAATTCATAGTGAAAATCA+TGG | + | chr2.2:11029699-11029718 | MS.gene35826:intron | 25.0% |
| ! | ATTTCTTTGTCTGATTATCT+TGG | + | chr2.2:11028718-11028737 | MS.gene35826:CDS | 25.0% |
| ! | GAAAGATTCATGACATAAAT+TGG | + | chr2.2:11030690-11030709 | MS.gene35826:intron | 25.0% |
| ! | TAATATATTTCCTACCATGT+TGG | - | chr2.2:11029517-11029536 | None:intergenic | 25.0% |
| ! | TACTAAAACATATTCCAACA+TGG | + | chr2.2:11029500-11029519 | MS.gene35826:intron | 25.0% |
| ! | TAGCAATATTTGTAAAGGAA+AGG | - | chr2.2:11030289-11030308 | None:intergenic | 25.0% |
| ! | TTATAATGTTGTCATAGGTT+TGG | + | chr2.2:11031030-11031049 | MS.gene35826:intron | 25.0% |
| ! | TTCACAATATCAACTTAATG+AGG | + | chr2.2:11028465-11028484 | MS.gene35826:CDS | 25.0% |
| !! | AAAAGTTGTTGTTCAAGTTA+AGG | + | chr2.2:11031274-11031293 | MS.gene35826:CDS | 25.0% |
| !! | GTTTTATGCTAGAATCATAT+TGG | + | chr2.2:11031114-11031133 | MS.gene35826:CDS | 25.0% |
| !! | TTTTATGACTTCCTTATAGT+CGG | + | chr2.2:11028817-11028836 | MS.gene35826:intron | 25.0% |
| !!! | ACATTTTCATCTTGTTTACT+TGG | + | chr2.2:11029605-11029624 | MS.gene35826:intron | 25.0% |
| !!! | CTCTAATTTCTAGTAATAGT+GGG | - | chr2.2:11030376-11030395 | None:intergenic | 25.0% |
| !!! | TCTCTAATTTCTAGTAATAG+TGG | - | chr2.2:11030377-11030396 | None:intergenic | 25.0% |
| !!! | TTTCTAGTTATTTGAGAAGA+GGG | - | chr2.2:11028679-11028698 | None:intergenic | 25.0% |
| !!! | TTTTCTAGTTATTTGAGAAG+AGG | - | chr2.2:11028680-11028699 | None:intergenic | 25.0% |
| !!! | TTTTCTTTTTGGTTTCTCAT+AGG | - | chr2.2:11030512-11030531 | None:intergenic | 25.0% |
| AAAACATATTCCAACATGGT+AGG | + | chr2.2:11029504-11029523 | MS.gene35826:intron | 30.0% | |
| AAGGATAGTAAATACAGTGA+GGG | + | chr2.2:11028604-11028623 | MS.gene35826:CDS | 30.0% | |
| AAGTAAACATCAATACCATC+AGG | - | chr2.2:11030804-11030823 | None:intergenic | 30.0% | |
| AATGTGATACACTTAATTGC+AGG | + | chr2.2:11028932-11028951 | MS.gene35826:intron | 30.0% | |
| ACAATACTATATTCAGCAAC+TGG | - | chr2.2:11028655-11028674 | None:intergenic | 30.0% | |
| AGAAAAATTGACACTTCAAG+TGG | + | chr2.2:11028694-11028713 | MS.gene35826:CDS | 30.0% | |
| ATTAGAATTCCAGTTGAAAG+AGG | + | chr2.2:11030466-11030485 | MS.gene35826:intron | 30.0% | |
| CAGTTAAGCACAAAAGAAAA+AGG | - | chr2.2:11029390-11029409 | None:intergenic | 30.0% | |
| CTGAGTTTAGTAAACAGAAA+AGG | - | chr2.2:11030561-11030580 | None:intergenic | 30.0% | |
| CTGTCAAAAATTTAGTGACA+TGG | + | chr2.2:11029336-11029355 | MS.gene35826:intron | 30.0% | |
| GAAAAATTGACACTTCAAGT+GGG | + | chr2.2:11028695-11028714 | MS.gene35826:CDS | 30.0% | |
| GATATGAATACATTTGATCC+TGG | - | chr2.2:11029010-11029029 | None:intergenic | 30.0% | |
| GATGTTTACTTTGACAATGT+TGG | + | chr2.2:11030813-11030832 | MS.gene35826:CDS | 30.0% | |
| TACAGTATTTGCAGTTGTAA+GGG | + | chr2.2:11028570-11028589 | MS.gene35826:CDS | 30.0% | |
| TCACTTTCTCATTCATTTCA+TGG | - | chr2.2:11029578-11029597 | None:intergenic | 30.0% | |
| TCTTCAATCCTTCATTACAA+GGG | - | chr2.2:11030057-11030076 | None:intergenic | 30.0% | |
| TGTAAGGAATCTTCTGAATA+TGG | + | chr2.2:11031067-11031086 | MS.gene35826:CDS | 30.0% | |
| TTACAGTATTTGCAGTTGTA+AGG | + | chr2.2:11028569-11028588 | MS.gene35826:CDS | 30.0% | |
| TTAGAACTTCAGCAAAATCA+CGG | - | chr2.2:11028888-11028907 | None:intergenic | 30.0% | |
| TTAGGTGAAGCTTATTAAAG+AGG | + | chr2.2:11030169-11030188 | MS.gene35826:intron | 30.0% | |
| TTCAACTGGAATTCTAATCT+TGG | - | chr2.2:11030464-11030483 | None:intergenic | 30.0% | |
| TTCTTCAATCCTTCATTACA+AGG | - | chr2.2:11030058-11030077 | None:intergenic | 30.0% | |
| ! | CACACTTCAAAATTTTCACA+AGG | - | chr2.2:11030658-11030677 | None:intergenic | 30.0% |
| ! | CATTTACGATGTAGTTGATA+AGG | - | chr2.2:11030944-11030963 | None:intergenic | 30.0% |
| ! | GCATTGATAAAGAGAAAAGA+CGG | - | chr2.2:11030267-11030286 | None:intergenic | 30.0% |
| ! | TAGTAAACAGAAAAGGCATA+TGG | - | chr2.2:11030554-11030573 | None:intergenic | 30.0% |
| ! | TCTGATTATCTTGGTTCTTT+AGG | + | chr2.2:11028727-11028746 | MS.gene35826:CDS | 30.0% |
| ! | TGGAGATTTTGCTAAAGATA+TGG | + | chr2.2:11031145-11031164 | MS.gene35826:CDS | 30.0% |
| ! | TTGAGGTCTCTTTTTCTTTT+TGG | - | chr2.2:11030523-11030542 | None:intergenic | 30.0% |
| ! | TTTTACAGGTATTTTCCTGA+TGG | + | chr2.2:11030786-11030805 | MS.gene35826:intron | 30.0% |
| !! | TCTTTGAAATCACTAGATCA+TGG | + | chr2.2:11029148-11029167 | MS.gene35826:intron | 30.0% |
| !!! | TTTTACTTCTTATGATGGGT+TGG | - | chr2.2:11030325-11030344 | None:intergenic | 30.0% |
| AAATCTGTGGACCTGATTTA+CGG | - | chr2.2:11029944-11029963 | None:intergenic | 35.0% | |
| AAGAATATGTGGTAGACTTG+TGG | - | chr2.2:11029651-11029670 | None:intergenic | 35.0% | |
| AAGGAATCTTCTGAATATGG+TGG | + | chr2.2:11031070-11031089 | MS.gene35826:CDS | 35.0% | |
| AAGTGATAGAAAGCAGAGAA+TGG | + | chr2.2:11028260-11028279 | MS.gene35826:CDS | 35.0% | |
| AATACATTTGATCCTGGCTT+TGG | - | chr2.2:11029004-11029023 | None:intergenic | 35.0% | |
| AATGTTAGAGCTGGAGAATA+AGG | - | chr2.2:11031252-11031271 | None:intergenic | 35.0% | |
| AGGAATCTTCTGAATATGGT+GGG | + | chr2.2:11031071-11031090 | MS.gene35826:CDS | 35.0% | |
| AGGATAGTAAATACAGTGAG+GGG | + | chr2.2:11028605-11028624 | MS.gene35826:CDS | 35.0% | |
| AGGATTGAAGAAATTGCTTG+AGG | + | chr2.2:11030066-11030085 | MS.gene35826:intron | 35.0% | |
| ATGGAAAGATACTTGCAAGA+AGG | + | chr2.2:11031164-11031183 | MS.gene35826:CDS | 35.0% | |
| ATTACATCATCTGCACTAGA+AGG | - | chr2.2:11029761-11029780 | None:intergenic | 35.0% | |
| ATTCCTTACACCTTCTCTTT+CGG | - | chr2.2:11031057-11031076 | None:intergenic | 35.0% | |
| CAATCATGAAACAAAGCACA+AGG | - | chr2.2:11029911-11029930 | None:intergenic | 35.0% | |
| GAAGGATAGTAAATACAGTG+AGG | + | chr2.2:11028603-11028622 | MS.gene35826:CDS | 35.0% | |
| GAGGAATTTGGATATGATGA+CGG | + | chr2.2:11030188-11030207 | MS.gene35826:CDS | 35.0% | |
| GGATTACTACTTGCTTAAAG+CGG | - | chr2.2:11030246-11030265 | None:intergenic | 35.0% | |
| GTTTACTTTGACAATGTTGG+TGG | + | chr2.2:11030816-11030835 | MS.gene35826:CDS | 35.0% | |
| TGAAATGAAAAGACCTTCTG+AGG | - | chr2.2:11028449-11028468 | None:intergenic | 35.0% | |
| TGAAGGGTCTATCATAAAAC+AGG | - | chr2.2:11029877-11029896 | None:intergenic | 35.0% | |
| TGACATAAATTGGCATACTC+AGG | + | chr2.2:11030700-11030719 | MS.gene35826:intron | 35.0% | |
| TGAGATATCATTCCACAAAG+AGG | - | chr2.2:11030891-11030910 | None:intergenic | 35.0% | |
| TGATGTACAAACCAAATCTG+TGG | - | chr2.2:11029957-11029976 | None:intergenic | 35.0% | |
| TGATTCTTCCACGAAGATAA+GGG | - | chr2.2:11028420-11028439 | None:intergenic | 35.0% | |
| TTGGCTGAATATTGTACTGA+AGG | + | chr2.2:11028286-11028305 | MS.gene35826:CDS | 35.0% | |
| ! | AACTTTTCCAATGTTAGAGC+TGG | - | chr2.2:11031261-11031280 | None:intergenic | 35.0% |
| ! | GAATCATATTGGCATCGTTT+TGG | + | chr2.2:11031125-11031144 | MS.gene35826:CDS | 35.0% |
| ! | TTATTCTCCAGCTCTAACAT+TGG | + | chr2.2:11031251-11031270 | MS.gene35826:CDS | 35.0% |
| ! | TTTTCTCCTCTGTCAAACTA+TGG | - | chr2.2:11029450-11029469 | None:intergenic | 35.0% |
| !! | TGACGGATTCAACTACAATA+AGG | + | chr2.2:11030205-11030224 | MS.gene35826:CDS | 35.0% |
| AAGATACTTGCAAGAAGGCA+AGG | + | chr2.2:11031169-11031188 | MS.gene35826:CDS | 40.0% | |
| ACAAGGTTATGACAGTCTGA+AGG | - | chr2.2:11029894-11029913 | None:intergenic | 40.0% | |
| ACACTTAATTGCAGGAGTTC+CGG | + | chr2.2:11028940-11028959 | MS.gene35826:intron | 40.0% | |
| ACCATTGCTGTAGTTGCATA+AGG | + | chr2.2:11030623-11030642 | MS.gene35826:intron | 40.0% | |
| AGAAAGCAGAGAATGGTACT+TGG | + | chr2.2:11028267-11028286 | MS.gene35826:CDS | 40.0% | |
| AGAGGTTATCCTCTTTCAAC+TGG | - | chr2.2:11030478-11030497 | None:intergenic | 40.0% | |
| ATGTCAAGTAGAATGTCCGT+AGG | + | chr2.2:11030594-11030613 | MS.gene35826:intron | 40.0% | |
| CAAGAGAAAGAGAGACAGTA+CGG | - | chr2.2:11028339-11028358 | None:intergenic | 40.0% | |
| CAAGGTTATGACAGTCTGAA+GGG | - | chr2.2:11029893-11029912 | None:intergenic | 40.0% | |
| CATAAATTGGCATACTCAGG+AGG | + | chr2.2:11030703-11030722 | MS.gene35826:intron | 40.0% | |
| CATGCTAGAATACCTCTTTG+TGG | + | chr2.2:11030876-11030895 | MS.gene35826:CDS | 40.0% | |
| CCTTATAGTCGGTACATGTT+TGG | + | chr2.2:11028828-11028847 | MS.gene35826:intron | 40.0% | |
| CTAACTCACCCTTGTAATGA+AGG | + | chr2.2:11030046-11030065 | MS.gene35826:intron | 40.0% | |
| GAAAATCATGGCTCAAGTGA+TGG | + | chr2.2:11029711-11029730 | MS.gene35826:intron | 40.0% | |
| GATTCCTGTTTCCGTAAATC+AGG | + | chr2.2:11029930-11029949 | MS.gene35826:intron | 40.0% | |
| GCAAGGGTGAAGTAAATGTT+GGG | + | chr2.2:11029182-11029201 | MS.gene35826:intron | 40.0% | |
| GGATAGTAAATACAGTGAGG+GGG | + | chr2.2:11028606-11028625 | MS.gene35826:CDS | 40.0% | |
| GTAAATCAGGTCCACAGATT+TGG | + | chr2.2:11029943-11029962 | MS.gene35826:intron | 40.0% | |
| GTATTCATATCTGCTGCATC+TGG | + | chr2.2:11029019-11029038 | MS.gene35826:CDS | 40.0% | |
| GTGATTCTTCCACGAAGATA+AGG | - | chr2.2:11028421-11028440 | None:intergenic | 40.0% | |
| TATCGGAATTGAAGGCTTTC+TGG | + | chr2.2:11031214-11031233 | MS.gene35826:CDS | 40.0% | |
| TATCTTCGTGGAAGAATCAC+TGG | + | chr2.2:11028421-11028440 | MS.gene35826:CDS | 40.0% | |
| TCATTACAAGGGTGAGTTAG+TGG | - | chr2.2:11030046-11030065 | None:intergenic | 40.0% | |
| TCCTTATGCAACTACAGCAA+TGG | - | chr2.2:11030627-11030646 | None:intergenic | 40.0% | |
| TGAAAGAGGATAACCTCTTG+TGG | + | chr2.2:11030480-11030499 | MS.gene35826:intron | 40.0% | |
| TGCAAGGGTGAAGTAAATGT+TGG | + | chr2.2:11029181-11029200 | MS.gene35826:intron | 40.0% | |
| TGCTGTAGTTGCATAAGGAT+TGG | + | chr2.2:11030628-11030647 | MS.gene35826:intron | 40.0% | |
| ! | AGTTTGAGATGATCTGAGGT+TGG | - | chr2.2:11028316-11028335 | None:intergenic | 40.0% |
| ! | GCAACTACAGCAATGGTTTT+AGG | - | chr2.2:11030620-11030639 | None:intergenic | 40.0% |
| ! | TATTCAGCAACTGGAGCATT+TGG | - | chr2.2:11028646-11028665 | None:intergenic | 40.0% |
| ! | TTCTAGCATGCTTGTTGACA+TGG | - | chr2.2:11030866-11030885 | None:intergenic | 40.0% |
| !! | CCAAACATGTACCGACTATA+AGG | - | chr2.2:11028831-11028850 | None:intergenic | 40.0% |
| AAGAGGATAACCTCTTGTGG+AGG | + | chr2.2:11030483-11030502 | MS.gene35826:intron | 45.0% | |
| ACTTAATTGCAGGAGTTCCG+GGG | + | chr2.2:11028942-11028961 | MS.gene35826:intron | 45.0% | |
| AGAATCACTGGTACCTCAGA+AGG | + | chr2.2:11028433-11028452 | MS.gene35826:CDS | 45.0% | |
| AGAGGATAACCTCTTGTGGA+GGG | + | chr2.2:11030484-11030503 | MS.gene35826:intron | 45.0% | |
| CACTTAATTGCAGGAGTTCC+GGG | + | chr2.2:11028941-11028960 | MS.gene35826:intron | 45.0% | |
| GCACATCCATAGTTTGACAG+AGG | + | chr2.2:11029441-11029460 | MS.gene35826:intron | 45.0% | |
| GGCATATGGTCTAACAGTTG+AGG | - | chr2.2:11030540-11030559 | None:intergenic | 45.0% | |
| GTTGTCCGGGATTGAATCAT+GGG | - | chr2.2:11028362-11028381 | None:intergenic | 45.0% | |
| TAGGTTTGGACCGAAAGAGA+AGG | + | chr2.2:11031044-11031063 | MS.gene35826:intron | 45.0% | |
| TCCACGAAGATAAGGGTCAA+CGG | - | chr2.2:11028413-11028432 | None:intergenic | 45.0% | |
| TCCTATCAGTGCAGATAGCA+GGG | + | chr2.2:11029821-11029840 | MS.gene35826:intron | 45.0% | |
| TCTTGCCCATGATTCAATCC+CGG | + | chr2.2:11028354-11028373 | MS.gene35826:CDS | 45.0% | |
| TGCTAAGATCCGAGGATGTA+GGG | + | chr2.2:11029069-11029088 | MS.gene35826:CDS | 45.0% | |
| TGGACCTGATTTACGGAAAC+AGG | - | chr2.2:11029937-11029956 | None:intergenic | 45.0% | |
| TGTAAGGGTGATCAGATCGA+AGG | + | chr2.2:11028585-11028604 | MS.gene35826:CDS | 45.0% | |
| TTGCTAAGATCCGAGGATGT+AGG | + | chr2.2:11029068-11029087 | MS.gene35826:CDS | 45.0% | |
| ! | ACGGAGTTTGAGATGATCTG+AGG | - | chr2.2:11028320-11028339 | None:intergenic | 45.0% |
| ! | TCTGAATATGGTGGGAAAGC+AGG | + | chr2.2:11031079-11031098 | MS.gene35826:CDS | 45.0% |
| !! | CAGTACTGGCTCTGATGATA+AGG | + | chr2.2:11029099-11029118 | MS.gene35826:CDS | 45.0% |
| !!! | CAGCAATGGTTTTAGGCCTA+CGG | - | chr2.2:11030613-11030632 | None:intergenic | 45.0% |
| !! | ATAAAATATAAGATTTATTA+GGG | - | chr2.2:11028786-11028805 | None:intergenic | 5.0% |
| !! | TATAAAATATAAGATTTATT+AGG | - | chr2.2:11028787-11028806 | None:intergenic | 5.0% |
| !!! | AATCTTATATTTTATAAAAA+AGG | + | chr2.2:11028791-11028810 | MS.gene35826:intron | 5.0% |
| AGACCTCAGCTCTTACCAAC+GGG | + | chr2.2:11030394-11030413 | MS.gene35826:intron | 50.0% | |
| ATCCGAGGATGTAGGGTCAT+CGG | + | chr2.2:11029076-11029095 | MS.gene35826:CDS | 50.0% | |
| ATCCTCGGATCTTAGCAAGC+TGG | - | chr2.2:11029066-11029085 | None:intergenic | 50.0% | |
| CCTATCAGTGCAGATAGCAG+GGG | + | chr2.2:11029822-11029841 | MS.gene35826:intron | 50.0% | |
| CTCCTATCAGTGCAGATAGC+AGG | + | chr2.2:11029820-11029839 | MS.gene35826:intron | 50.0% | |
| GAGACCTCAGCTCTTACCAA+CGG | + | chr2.2:11030393-11030412 | MS.gene35826:intron | 50.0% | |
| GATAAGGGTCAACGGAGAGA+AGG | - | chr2.2:11028405-11028424 | None:intergenic | 50.0% | |
| GGGGGTTGGATTTAGTGGAA+GGG | + | chr2.2:11030414-11030433 | MS.gene35826:intron | 50.0% | |
| GGGGTTGGATTTAGTGGAAG+GGG | + | chr2.2:11030415-11030434 | MS.gene35826:intron | 50.0% | |
| GGGTTGGATTTAGTGGAAGG+GGG | + | chr2.2:11030416-11030435 | MS.gene35826:intron | 50.0% | |
| GGTTGTCCGGGATTGAATCA+TGG | - | chr2.2:11028363-11028382 | None:intergenic | 50.0% | |
| GTACTAGCAGATCCAAAGCC+AGG | + | chr2.2:11028989-11029008 | MS.gene35826:CDS | 50.0% | |
| TACTTCACCCTTGCATCGCA+CGG | - | chr2.2:11029176-11029195 | None:intergenic | 50.0% | |
| TCAACTGCCAGATGGTTGTC+CGG | - | chr2.2:11028376-11028395 | None:intergenic | 50.0% | |
| TCATAGGTTCCCTCCACAAG+AGG | - | chr2.2:11030496-11030515 | None:intergenic | 50.0% | |
| TCCGTTGACCCTTATCTTCG+TGG | + | chr2.2:11028409-11028428 | MS.gene35826:CDS | 50.0% | |
| TGTGGTAGACTTGTGGCTGA+AGG | - | chr2.2:11029644-11029663 | None:intergenic | 50.0% | |
| TTCAATCCCGGACAACCATC+TGG | + | chr2.2:11028366-11028385 | MS.gene35826:CDS | 50.0% | |
| ! | ATATGGTGGGAAAGCAGGTG+AGG | + | chr2.2:11031084-11031103 | MS.gene35826:CDS | 50.0% |
| ! | GGACCGAAAGAGAAGGTGTA+AGG | + | chr2.2:11031051-11031070 | MS.gene35826:CDS | 50.0% |
| ! | GGTGCTGTCGGTATAAATGC+TGG | + | chr2.2:11029040-11029059 | MS.gene35826:CDS | 50.0% |
| ACCTCAGCTCTTACCAACGG+GGG | + | chr2.2:11030396-11030415 | MS.gene35826:intron | 55.0% | |
| ACTTCACCCTTGCATCGCAC+GGG | - | chr2.2:11029175-11029194 | None:intergenic | 55.0% | |
| AGTTCCGGGGTTTGCAGCAT+GGG | + | chr2.2:11028955-11028974 | MS.gene35826:CDS | 55.0% | |
| CAACTGCCAGATGGTTGTCC+GGG | - | chr2.2:11028375-11028394 | None:intergenic | 55.0% | |
| CCAACGGGGGTTGGATTTAG+TGG | + | chr2.2:11030409-11030428 | MS.gene35826:intron | 55.0% | |
| CCACTAAATCCAACCCCCGT+TGG | - | chr2.2:11030412-11030431 | None:intergenic | 55.0% | |
| CGGGGGTTGGATTTAGTGGA+AGG | + | chr2.2:11030413-11030432 | MS.gene35826:intron | 55.0% | |
| GACCTCAGCTCTTACCAACG+GGG | + | chr2.2:11030395-11030414 | MS.gene35826:intron | 55.0% | |
| GGAAAGCAGGTGAGGATGGA+GGG | + | chr2.2:11031092-11031111 | MS.gene35826:CDS | 55.0% | |
| GGAGAGTCTCAACTGCCAGA+TGG | - | chr2.2:11028384-11028403 | None:intergenic | 55.0% | |
| GGGGGCAGTATCTCACAACA+CGG | + | chr2.2:11030434-11030453 | MS.gene35826:intron | 55.0% | |
| TGCAGCATGGGTGGGAATAG+AGG | + | chr2.2:11028967-11028986 | MS.gene35826:CDS | 55.0% | |
| TGCCGATGACCCTACATCCT+CGG | - | chr2.2:11029081-11029100 | None:intergenic | 55.0% | |
| TGTAGGGTCATCGGCAGTAC+TGG | + | chr2.2:11029085-11029104 | MS.gene35826:CDS | 55.0% | |
| ! | CCCCTGCTATCTGCACTGAT+AGG | - | chr2.2:11029825-11029844 | None:intergenic | 55.0% |
| !! | TCTGCTGCATCTGGTGCTGT+CGG | + | chr2.2:11029028-11029047 | MS.gene35826:CDS | 55.0% |
| CAGCTCTTACCAACGGGGGT+TGG | + | chr2.2:11030400-11030419 | MS.gene35826:intron | 60.0% | |
| CATGGACCCGTGCGATGCAA+GGG | + | chr2.2:11029166-11029185 | MS.gene35826:intron | 60.0% | |
| GAGTTCCGGGGTTTGCAGCA+TGG | + | chr2.2:11028954-11028973 | MS.gene35826:CDS | 60.0% | |
| GGGAAAGCAGGTGAGGATGG+AGG | + | chr2.2:11031091-11031110 | MS.gene35826:CDS | 60.0% | |
| GGTGGGAAAGCAGGTGAGGA+TGG | + | chr2.2:11031088-11031107 | MS.gene35826:CDS | 60.0% | |
| TCATGGACCCGTGCGATGCA+AGG | + | chr2.2:11029165-11029184 | MS.gene35826:intron | 60.0% | |
| ! | ACCCCCGTTGGTAAGAGCTG+AGG | - | chr2.2:11030400-11030419 | None:intergenic | 60.0% |
| !! | GGCCAGCTTGCTAAGATCCG+AGG | + | chr2.2:11029061-11029080 | MS.gene35826:CDS | 60.0% |
| CCCACCCATGCTGCAAACCC+CGG | - | chr2.2:11028962-11028981 | None:intergenic | 65.0% | |
| CCGGGGTTTGCAGCATGGGT+GGG | + | chr2.2:11028959-11028978 | MS.gene35826:CDS | 65.0% | |
| TCCGGGGTTTGCAGCATGGG+TGG | + | chr2.2:11028958-11028977 | MS.gene35826:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 11028253 | 11031301 | 11028253 | ID=MS.gene35826 |
| chr2.2 | mRNA | 11028253 | 11031301 | 11028253 | ID=MS.gene35826.t1;Parent=MS.gene35826 |
| chr2.2 | exon | 11028253 | 11028486 | 11028253 | ID=MS.gene35826.t1.exon1;Parent=MS.gene35826.t1 |
| chr2.2 | CDS | 11028253 | 11028486 | 11028253 | ID=cds.MS.gene35826.t1;Parent=MS.gene35826.t1 |
| chr2.2 | exon | 11028565 | 11028748 | 11028565 | ID=MS.gene35826.t1.exon2;Parent=MS.gene35826.t1 |
| chr2.2 | CDS | 11028565 | 11028748 | 11028565 | ID=cds.MS.gene35826.t1;Parent=MS.gene35826.t1 |
| chr2.2 | exon | 11028954 | 11029120 | 11028954 | ID=MS.gene35826.t1.exon3;Parent=MS.gene35826.t1 |
| chr2.2 | CDS | 11028954 | 11029120 | 11028954 | ID=cds.MS.gene35826.t1;Parent=MS.gene35826.t1 |
| chr2.2 | exon | 11030173 | 11030255 | 11030173 | ID=MS.gene35826.t1.exon4;Parent=MS.gene35826.t1 |
| chr2.2 | CDS | 11030173 | 11030255 | 11030173 | ID=cds.MS.gene35826.t1;Parent=MS.gene35826.t1 |
| chr2.2 | exon | 11030794 | 11030920 | 11030794 | ID=MS.gene35826.t1.exon5;Parent=MS.gene35826.t1 |
| chr2.2 | CDS | 11030794 | 11030920 | 11030794 | ID=cds.MS.gene35826.t1;Parent=MS.gene35826.t1 |
| chr2.2 | exon | 11031047 | 11031301 | 11031047 | ID=MS.gene35826.t1.exon6;Parent=MS.gene35826.t1 |
| chr2.2 | CDS | 11031047 | 11031301 | 11031047 | ID=cds.MS.gene35826.t1;Parent=MS.gene35826.t1 |
| Gene Sequence |
| Protein sequence |
