Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38709.t1 | XP_003603050.1 | 98 | 807 | 16 | 0 | 1 | 807 | 1 | 807 | 0.00E+00 | 1523.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38709.t1 | F4K4J0 | 55.9 | 829 | 335 | 10 | 1 | 809 | 1 | 818 | 1.4e-235 | 817.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38709.t1 | G7J6E4 | 98.0 | 807 | 16 | 0 | 1 | 807 | 1 | 807 | 0.0e+00 | 1523.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene38709 | 0.886984 | 2.12E-72 | -1.69E-46 |
| MS.gene050084 | MS.gene38709 | 0.822027 | 2.95E-53 | -1.69E-46 |
| MS.gene050085 | MS.gene38709 | 0.840393 | 8.94E-58 | -1.69E-46 |
| MS.gene050213 | MS.gene38709 | 0.847866 | 8.82E-60 | -1.69E-46 |
| MS.gene050654 | MS.gene38709 | 0.827366 | 1.63E-54 | -1.69E-46 |
| MS.gene050945 | MS.gene38709 | 0.878216 | 3.36E-69 | -1.69E-46 |
| MS.gene051003 | MS.gene38709 | 0.823414 | 1.40E-53 | -1.69E-46 |
| MS.gene051234 | MS.gene38709 | 0.811971 | 5.36E-51 | -1.69E-46 |
| MS.gene051343 | MS.gene38709 | 0.849238 | 3.68E-60 | -1.69E-46 |
| MS.gene051597 | MS.gene38709 | 0.823811 | 1.13E-53 | -1.69E-46 |
| MS.gene051975 | MS.gene38709 | 0.842749 | 2.14E-58 | -1.69E-46 |
| MS.gene052072 | MS.gene38709 | 0.803571 | 3.27E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene38709 | 0.812185 | 4.82E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene38709 | 0.827493 | 1.52E-54 | -1.69E-46 |
| MS.gene052775 | MS.gene38709 | 0.825776 | 3.90E-54 | -1.69E-46 |
| MS.gene052776 | MS.gene38709 | 0.830745 | 2.47E-55 | -1.69E-46 |
| MS.gene053058 | MS.gene38709 | 0.828034 | 1.12E-54 | -1.69E-46 |
| MS.gene053143 | MS.gene38709 | 0.802297 | 6.00E-49 | -1.69E-46 |
| MS.gene053931 | MS.gene38709 | 0.811306 | 7.48E-51 | -1.69E-46 |
| MS.gene054413 | MS.gene38709 | 0.843918 | 1.04E-58 | -1.69E-46 |
| MS.gene054892 | MS.gene38709 | 0.81501 | 1.15E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene38709 | 0.820247 | 7.59E-53 | -1.69E-46 |
| MS.gene054957 | MS.gene38709 | 0.862867 | 3.74E-64 | -1.69E-46 |
| MS.gene055513 | MS.gene38709 | 0.824665 | 7.14E-54 | -1.69E-46 |
| MS.gene056045 | MS.gene38709 | 0.869639 | 2.66E-66 | -1.69E-46 |
| MS.gene056097 | MS.gene38709 | 0.816119 | 6.52E-52 | -1.69E-46 |
| MS.gene05615 | MS.gene38709 | 0.837796 | 4.21E-57 | -1.69E-46 |
| MS.gene056181 | MS.gene38709 | 0.830628 | 2.64E-55 | -1.69E-46 |
| MS.gene056403 | MS.gene38709 | 0.836119 | 1.13E-56 | -1.69E-46 |
| MS.gene056605 | MS.gene38709 | 0.836602 | 8.50E-57 | -1.69E-46 |
| MS.gene05689 | MS.gene38709 | 0.816566 | 5.18E-52 | -1.69E-46 |
| MS.gene056973 | MS.gene38709 | 0.809754 | 1.62E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene38709 | 0.814748 | 1.32E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene38709 | 0.822001 | 2.99E-53 | -1.69E-46 |
| MS.gene058292 | MS.gene38709 | 0.831551 | 1.57E-55 | -1.69E-46 |
| MS.gene059146 | MS.gene38709 | 0.853825 | 1.85E-61 | -1.69E-46 |
| MS.gene05985 | MS.gene38709 | -0.846893 | 1.63E-59 | -1.69E-46 |
| MS.gene059901 | MS.gene38709 | -0.817434 | 3.30E-52 | -1.69E-46 |
| MS.gene060763 | MS.gene38709 | 0.810915 | 9.09E-51 | -1.69E-46 |
| MS.gene060933 | MS.gene38709 | 0.877535 | 5.81E-69 | -1.69E-46 |
| MS.gene060935 | MS.gene38709 | 0.837078 | 6.43E-57 | -1.69E-46 |
| MS.gene060937 | MS.gene38709 | 0.8581 | 1.04E-62 | -1.69E-46 |
| MS.gene061100 | MS.gene38709 | 0.821332 | 4.27E-53 | -1.69E-46 |
| MS.gene061160 | MS.gene38709 | 0.812345 | 4.44E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38709.t1 | MTR_3g101790 | 98.017 | 807 | 16 | 0 | 1 | 807 | 1 | 807 | 0.0 | 1627 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38709.t1 | AT5G42920 | 56.595 | 834 | 321 | 11 | 1 | 809 | 1 | 818 | 0.0 | 865 |
| MS.gene38709.t1 | AT5G42920 | 57.022 | 712 | 277 | 9 | 116 | 809 | 1 | 701 | 0.0 | 740 |
| MS.gene38709.t1 | AT1G45233 | 58.425 | 457 | 172 | 4 | 32 | 488 | 14 | 452 | 0.0 | 534 |
Find 165 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAAGCTTGAGCATCTTTC+AGG | 0.161581 | 3.3:+84278061 | None:intergenic |
| TAACTTACCAGTGTCCTTAT+TGG | 0.208665 | 3.3:+84278026 | None:intergenic |
| GCCTGTTAGTGGTGGGTTCT+TGG | 0.218520 | 3.3:-84274498 | MS.gene38709:CDS |
| TCATTATCTTAAAGCTATTA+AGG | 0.227514 | 3.3:-84279348 | MS.gene38709:CDS |
| GTGAACATCATCTTCCAATT+TGG | 0.244867 | 3.3:+84276745 | None:intergenic |
| GCACACTCCCTTGTGCAAAT+TGG | 0.262600 | 3.3:-84275656 | MS.gene38709:CDS |
| TACGTTGCAGCTTCATAATT+TGG | 0.262615 | 3.3:-84279384 | MS.gene38709:CDS |
| ACCGAATCCTTTATATCCTT+TGG | 0.278208 | 3.3:+84279254 | None:intergenic |
| TGATCAAACTTAGTCCTCTT+TGG | 0.279549 | 3.3:+84275457 | None:intergenic |
| TCTCTTTCGTGGATGGATTC+TGG | 0.284635 | 3.3:-84275250 | MS.gene38709:CDS |
| ACAGCAAAAGAAAATCCTTT+TGG | 0.310436 | 3.3:-84278313 | MS.gene38709:CDS |
| CCAATCCATCATTCTCAATA+TGG | 0.315483 | 3.3:+84274997 | None:intergenic |
| CCGATCCTCCTCAATCAAAA+TGG | 0.317683 | 3.3:+84279451 | None:intergenic |
| GACTTGTCAGGAACTTCTTT+CGG | 0.323775 | 3.3:+84278277 | None:intergenic |
| TTTGGAATCTTCTGAGGAAT+TGG | 0.324635 | 3.3:+84279730 | None:intergenic |
| TGCTCGCAGTCAAGCCAATA+AGG | 0.325903 | 3.3:-84278040 | MS.gene38709:CDS |
| CTGCAAACATCATGCAAAAC+TGG | 0.335266 | 3.3:-84278337 | MS.gene38709:CDS |
| AATTTATTCCCCAATGATAC+AGG | 0.341767 | 3.3:-84276473 | MS.gene38709:CDS |
| AGTAAATTTCGTGTCTTTCC+AGG | 0.345778 | 3.3:+84274436 | None:intergenic |
| TCAGGCACAAGTTCAATATC+AGG | 0.346755 | 3.3:+84279299 | None:intergenic |
| TGTGATTTACTCACAGCTAT+TGG | 0.352560 | 3.3:-84278133 | MS.gene38709:CDS |
| GGGTGATTCTTCATCCGATT+TGG | 0.352781 | 3.3:+84279712 | None:intergenic |
| CCTGTTAGTGGTGGGTTCTT+GGG | 0.353815 | 3.3:-84274497 | MS.gene38709:CDS |
| AGCTCGAGCCCTGTATCATT+GGG | 0.354935 | 3.3:+84276464 | None:intergenic |
| TGTCATGGATAGCTCCAAAT+TGG | 0.361242 | 3.3:-84276759 | MS.gene38709:CDS |
| TGATAGTTCTGATTTCTTGC+TGG | 0.365281 | 3.3:-84275353 | MS.gene38709:CDS |
| GGCACAGGTAGGGCTCTTAT+AGG | 0.366498 | 3.3:+84275622 | None:intergenic |
| CCCAAGAACCCACCACTAAC+AGG | 0.369943 | 3.3:+84274497 | None:intergenic |
| GAACTTCACGTCCTTTCAAA+TGG | 0.381979 | 3.3:-84276273 | MS.gene38709:CDS |
| CCTACAATCTCCAGATCAAT+AGG | 0.388992 | 3.3:+84278087 | None:intergenic |
| TTCCTTCACTTAATAAAGTT+AGG | 0.391363 | 3.3:-84275399 | MS.gene38709:CDS |
| TGAAATTAAGCTAGCTTGCT+TGG | 0.391939 | 3.3:+84275432 | None:intergenic |
| TTGACAGATCAAGATCAGTA+TGG | 0.393928 | 3.3:-84275081 | MS.gene38709:intron |
| TTGGAATCTTCTGAGGAATT+GGG | 0.394799 | 3.3:+84279731 | None:intergenic |
| AGATCGCGAAGGAGTTGTTT+AGG | 0.399266 | 3.3:+84279611 | None:intergenic |
| GCTCAATTTCGAGCTATATC+AGG | 0.400382 | 3.3:-84279192 | MS.gene38709:intron |
| ACGTAATTATGTTCAGTAAC+AGG | 0.402014 | 3.3:+84274632 | None:intergenic |
| AGATAAAGAGGAGCATGTTC+AGG | 0.402679 | 3.3:-84275572 | MS.gene38709:CDS |
| AAGAGTGAAGATGTTGTATC+TGG | 0.414049 | 3.3:-84276175 | MS.gene38709:CDS |
| TGTCCTGCAAAAGTGTTCCA+TGG | 0.414215 | 3.3:-84275684 | MS.gene38709:CDS |
| TACTGAACATAATTACGTAT+TGG | 0.421369 | 3.3:-84274627 | MS.gene38709:CDS |
| TCCTTGACTTCTACCCTCCT+TGG | 0.421741 | 3.3:+84276686 | None:intergenic |
| GTCCTCTTTGGAAGTAAAGT+TGG | 0.423484 | 3.3:+84275469 | None:intergenic |
| AAGCTCGAGCCCTGTATCAT+TGG | 0.424127 | 3.3:+84276463 | None:intergenic |
| CACATTTCTTTCATCTGCGT+TGG | 0.425225 | 3.3:+84275192 | None:intergenic |
| GGCTTATGCAAGCCTGTTAG+TGG | 0.427169 | 3.3:-84274509 | MS.gene38709:CDS |
| GCCAGGAACCTACCACTACT+TGG | 0.432085 | 3.3:+84274403 | None:intergenic |
| ATTGTATGTGTTGGAGTAGA+AGG | 0.432464 | 3.3:-84276530 | MS.gene38709:CDS |
| GGATGCTCCAAAGGATATAA+AGG | 0.433541 | 3.3:-84279261 | MS.gene38709:CDS |
| TCCAAAGGATATAAAGGATT+CGG | 0.434186 | 3.3:-84279255 | MS.gene38709:CDS |
| TCAGTATGGAATATCCTCTA+AGG | 0.435454 | 3.3:-84275067 | MS.gene38709:CDS |
| CGGTGTCACAAAAGGAGAAC+TGG | 0.442782 | 3.3:-84275518 | MS.gene38709:CDS |
| GTTGATGTAATTGAAAATTC+CGG | 0.444747 | 3.3:-84275538 | MS.gene38709:CDS |
| ATCGGAGATGATTGATTCAA+TGG | 0.448522 | 3.3:+84279661 | None:intergenic |
| TTTCAAATGGGCTCAGCACC+TGG | 0.449308 | 3.3:-84276260 | MS.gene38709:CDS |
| CCTATTGATCTGGAGATTGT+AGG | 0.450944 | 3.3:-84278087 | MS.gene38709:CDS |
| GAAAATTCCGGTGTCACAAA+AGG | 0.454854 | 3.3:-84275526 | MS.gene38709:CDS |
| CTTTCCAGGAGATCGTCTTC+CGG | 0.455333 | 3.3:+84274450 | None:intergenic |
| AGTAAAATCCACCGGCGCCT+TGG | 0.456353 | 3.3:+84279406 | None:intergenic |
| TTGTATGCGTAATTCCTAGC+TGG | 0.459235 | 3.3:+84278205 | None:intergenic |
| GACGGAACGCGCCAAGGCGC+CGG | 0.461594 | 3.3:-84279417 | MS.gene38709:CDS |
| ACACGAAATTTACTTCCAAC+TGG | 0.462020 | 3.3:-84274427 | MS.gene38709:CDS |
| ATGGTCAGAGACGTAGAAAA+AGG | 0.466929 | 3.3:-84276709 | MS.gene38709:CDS |
| AACTTCACGTCCTTTCAAAT+GGG | 0.468507 | 3.3:-84276272 | MS.gene38709:CDS |
| CTTTGCAGAACCTATTGATC+TGG | 0.474661 | 3.3:-84278097 | MS.gene38709:CDS |
| GTCCTGCAAAAGTGTTCCAT+GGG | 0.475044 | 3.3:-84275683 | MS.gene38709:CDS |
| TCACTTCATCACTCTTCGTC+AGG | 0.476768 | 3.3:-84279570 | MS.gene38709:intron |
| GTAATGAGTTTCGCAGGCTT+AGG | 0.488419 | 3.3:+84276584 | None:intergenic |
| GCCTAGTGAAGTTTCGTCTC+CGG | 0.488424 | 3.3:-84275602 | MS.gene38709:CDS |
| CCTTGTGCAAATTGGATGGC+TGG | 0.488621 | 3.3:-84275648 | MS.gene38709:CDS |
| TCGACTATTATTTAGATGAC+GGG | 0.492059 | 3.3:-84274574 | MS.gene38709:CDS |
| CTCAAGGAGAAAAGCTCAGT+TGG | 0.496776 | 3.3:-84276098 | MS.gene38709:CDS |
| CTGGATAGTATGACGGAAGA+TGG | 0.496785 | 3.3:-84275499 | MS.gene38709:CDS |
| CCATATTGAGAATGATGGAT+TGG | 0.500477 | 3.3:-84274997 | MS.gene38709:CDS |
| CACAAAGTCTCTTTCGTGGA+TGG | 0.500633 | 3.3:-84275257 | MS.gene38709:CDS |
| CATCCACGAAAGAGACTTTG+TGG | 0.504004 | 3.3:+84275258 | None:intergenic |
| TTGCATAAGATGTCATTGTC+AGG | 0.506215 | 3.3:+84276494 | None:intergenic |
| ACTCTTTGTTCAAGATGCTA+TGG | 0.511192 | 3.3:-84276311 | MS.gene38709:CDS |
| GATGTGAAGGGAGACTTGTC+AGG | 0.511452 | 3.3:+84278265 | None:intergenic |
| GTGCCACAAAGTCTCTTTCG+TGG | 0.511476 | 3.3:-84275261 | MS.gene38709:CDS |
| TTAAGAGACTTAAGATGTGA+AGG | 0.514586 | 3.3:+84278252 | None:intergenic |
| TTCCTCAGAAGATTCCAAAT+CGG | 0.514850 | 3.3:-84279726 | MS.gene38709:CDS |
| GGAGCATGTTCAGGAATCAA+TGG | 0.514864 | 3.3:-84275563 | MS.gene38709:CDS |
| TTCGACTATTATTTAGATGA+CGG | 0.514880 | 3.3:-84274575 | MS.gene38709:CDS |
| TGCACTACCTTGGTTGATGT+TGG | 0.517644 | 3.3:-84274530 | MS.gene38709:CDS |
| CTCATAATTTGATGCTCAAG+AGG | 0.519703 | 3.3:-84279214 | MS.gene38709:CDS |
| GGAAGCAGTGGAGACACCTC+AGG | 0.528192 | 3.3:+84276220 | None:intergenic |
| ATCCGATTTGGAATCTTCTG+AGG | 0.529566 | 3.3:+84279724 | None:intergenic |
| AAATGGGCTCAGCACCTGGC+AGG | 0.529594 | 3.3:-84276256 | MS.gene38709:CDS |
| AGATACAACATCTTCACTCT+TGG | 0.532554 | 3.3:+84276177 | None:intergenic |
| GACCTAACTTTATTAAGTGA+AGG | 0.533202 | 3.3:+84275397 | None:intergenic |
| ATCTTCTGAGGAATTGGGAA+AGG | 0.534448 | 3.3:+84279736 | None:intergenic |
| ATCACCGGAAGACGATCTCC+TGG | 0.534779 | 3.3:-84274454 | MS.gene38709:CDS |
| GGAACGCGCCAAGGCGCCGG+TGG | 0.534919 | 3.3:-84279414 | MS.gene38709:CDS |
| CTACCACTACTTGGGCCAGT+TGG | 0.535290 | 3.3:+84274412 | None:intergenic |
| TTCCAACTTTACTTCCAAAG+AGG | 0.536943 | 3.3:-84275471 | MS.gene38709:CDS |
| ACAGCTATTGGCTCAGAAAG+AGG | 0.537328 | 3.3:-84278121 | MS.gene38709:CDS |
| GGTTTGCAATAGTCTCCAAA+AGG | 0.539923 | 3.3:+84278298 | None:intergenic |
| GCTGCTTCACTGTTATCAGC+GGG | 0.541519 | 3.3:+84276199 | None:intergenic |
| GCCAAGGAGGGTAGAAGTCA+AGG | 0.542038 | 3.3:-84276687 | MS.gene38709:CDS |
| TCCTCTTTATCTATGATAGC+CGG | 0.543176 | 3.3:+84275583 | None:intergenic |
| CTGTTATCAGCGGGAAGCAG+TGG | 0.544666 | 3.3:+84276208 | None:intergenic |
| AATGCAGACGGAACGCGCCA+AGG | 0.546272 | 3.3:-84279423 | MS.gene38709:CDS |
| TATGCAAGCCTGTTAGTGGT+GGG | 0.547975 | 3.3:-84274505 | MS.gene38709:CDS |
| TCCGGCTATCATAGATAAAG+AGG | 0.548495 | 3.3:-84275584 | MS.gene38709:CDS |
| AGGGCTCGAGCTTCCACACC+AGG | 0.548560 | 3.3:-84276453 | MS.gene38709:intron |
| CTCAGGCATTTCCACTGTCA+TGG | 0.550033 | 3.3:-84276774 | MS.gene38709:intron |
| CTTAGCGTAATGAGTTTCGC+AGG | 0.550291 | 3.3:+84276578 | None:intergenic |
| TTATATCCTTTGGAGCATCC+CGG | 0.550527 | 3.3:+84279264 | None:intergenic |
| TTATGCAAGCCTGTTAGTGG+TGG | 0.554168 | 3.3:-84274506 | MS.gene38709:CDS |
| GAGTACCATATTGAGAATGA+TGG | 0.556346 | 3.3:-84275002 | MS.gene38709:CDS |
| CTTCCAACTGGCCCAAGTAG+TGG | 0.557816 | 3.3:-84274415 | None:intergenic |
| TACGCTAAGGTTTGAGTACG+TGG | 0.557983 | 3.3:-84276564 | MS.gene38709:CDS |
| AAGGACAAATTGCACTACCT+TGG | 0.559183 | 3.3:-84274540 | MS.gene38709:CDS |
| GGCTGCTTCACTGTTATCAG+CGG | 0.559248 | 3.3:+84276198 | None:intergenic |
| GTCAAGGAGAGCCCTGACCA+AGG | 0.564171 | 3.3:-84276671 | MS.gene38709:CDS |
| AAATGTGAATCTAGAAGCCA+AGG | 0.564314 | 3.3:-84275176 | MS.gene38709:intron |
| CTGCGAAACTCATTACGCTA+AGG | 0.568154 | 3.3:-84276577 | MS.gene38709:CDS |
| AGGTGCTGAGCCCATTTGAA+AGG | 0.573624 | 3.3:+84276262 | None:intergenic |
| TAAATCACATAAAGAGCTGG+TGG | 0.575843 | 3.3:+84278147 | None:intergenic |
| GCAAGAAATCAATTCCTGCC+AGG | 0.576163 | 3.3:+84276242 | None:intergenic |
| AAGTTGAATATTGTATGTGT+TGG | 0.576638 | 3.3:-84276539 | MS.gene38709:CDS |
| GAAGACGGTGAGATAGAAGA+AGG | 0.577436 | 3.3:-84279791 | MS.gene38709:CDS |
| AGGAATTGATTTCTTGCCTG+AGG | 0.580835 | 3.3:-84276236 | MS.gene38709:CDS |
| GAGTAAATCACATAAAGAGC+TGG | 0.582503 | 3.3:+84278144 | None:intergenic |
| AAGGGAGTGTGCAAAGCCCA+TGG | 0.583753 | 3.3:+84275667 | None:intergenic |
| TAAGAGACTTAAGATGTGAA+GGG | 0.584117 | 3.3:+84278253 | None:intergenic |
| TCAAGGAGAGCCCTGACCAA+GGG | 0.584919 | 3.3:-84276670 | MS.gene38709:CDS |
| GGAGTAGAAGGATCTAATGA+TGG | 0.587145 | 3.3:-84276518 | MS.gene38709:CDS |
| ACTCCCTTGTGCAAATTGGA+TGG | 0.592687 | 3.3:-84275652 | MS.gene38709:CDS |
| AGAAGAAGGTTCAATCGCCA+TGG | 0.593173 | 3.3:-84279777 | MS.gene38709:CDS |
| GAAAGCACTCAAACCTGGTG+TGG | 0.596775 | 3.3:+84276440 | None:intergenic |
| GACGAAACTTCACTAGGCAC+AGG | 0.597712 | 3.3:+84275607 | None:intergenic |
| GACGAAGAGTGATGAAGTGA+AGG | 0.597855 | 3.3:+84279573 | None:intergenic |
| AAACTTCACTAGGCACAGGT+AGG | 0.600562 | 3.3:+84275611 | None:intergenic |
| CCAGCCATCCAATTTGCACA+AGG | 0.607211 | 3.3:+84275648 | None:intergenic |
| TCAATATGGTACTCCCCAGA+AGG | 0.607678 | 3.3:+84275011 | None:intergenic |
| AACTTCACTAGGCACAGGTA+GGG | 0.609874 | 3.3:+84275612 | None:intergenic |
| AATCTCTTACAAAACTTGAG+TGG | 0.610169 | 3.3:-84275714 | MS.gene38709:CDS |
| ATGACGGGTTATCATCTGAA+AGG | 0.619159 | 3.3:-84274559 | MS.gene38709:CDS |
| TTCTGCAGAGAATTCGCTCA+AGG | 0.620044 | 3.3:-84276114 | MS.gene38709:CDS |
| ATTTATTCCCCAATGATACA+GGG | 0.620305 | 3.3:-84276472 | MS.gene38709:CDS |
| GTGGATGGATTCTGGTGTGA+AGG | 0.621402 | 3.3:-84275242 | MS.gene38709:CDS |
| AGGAGAACTGGATAGTATGA+CGG | 0.623615 | 3.3:-84275506 | MS.gene38709:CDS |
| TTGCCTGTACAAAACCAGCT+AGG | 0.626584 | 3.3:-84278219 | MS.gene38709:CDS |
| CCAGGAACCTACCACTACTT+GGG | 0.627888 | 3.3:+84274404 | None:intergenic |
| AGTCAAGCCAATAAGGACAC+TGG | 0.636523 | 3.3:-84278033 | MS.gene38709:intron |
| GGATCGGGTTAAAATGCAGA+CGG | 0.649067 | 3.3:-84279435 | MS.gene38709:CDS |
| GTTCACGATGATGAAGAAGA+TGG | 0.649163 | 3.3:-84276728 | MS.gene38709:CDS |
| CTGTCTGTACTCGATTCTGT+TGG | 0.651052 | 3.3:+84276137 | None:intergenic |
| TGCAACGTAGTAAAATCCAC+CGG | 0.652794 | 3.3:+84279398 | None:intergenic |
| TGAACTTCGTGCAATAGAAG+CGG | 0.654739 | 3.3:-84274964 | MS.gene38709:CDS |
| CAAGGAGAGCCCTGACCAAG+GGG | 0.657687 | 3.3:-84276669 | MS.gene38709:CDS |
| CAGATCAATAGGTTCTGCAA+AGG | 0.660500 | 3.3:+84278098 | None:intergenic |
| ACTTCGTGCAATAGAAGCGG+AGG | 0.668958 | 3.3:-84274961 | MS.gene38709:intron |
| TTTGAGTAACGAGATCGCGA+AGG | 0.671039 | 3.3:+84279600 | None:intergenic |
| ACAACAGCGAAAATGGAAGA+CGG | 0.671179 | 3.3:-84279806 | None:intergenic |
| CAGCCATCCAATTTGCACAA+GGG | 0.676174 | 3.3:+84275649 | None:intergenic |
| TTTGGAGCTATCCATGACAG+TGG | 0.677285 | 3.3:+84276763 | None:intergenic |
| TTGAGAATGATGGATTGGAA+TGG | 0.679880 | 3.3:-84274992 | MS.gene38709:CDS |
| TAAATAATAGTCGAACAACA+TGG | 0.681981 | 3.3:+84274583 | None:intergenic |
| GCCGGAGACGAAACTTCACT+AGG | 0.682325 | 3.3:+84275601 | None:intergenic |
| GCATAAGCCAACATCAACCA+AGG | 0.685956 | 3.3:+84274523 | None:intergenic |
| GCTCGAGCCCTGTATCATTG+GGG | 0.698274 | 3.3:+84276465 | None:intergenic |
| AAGGAGAGCCCTGACCAAGG+GGG | 0.746053 | 3.3:-84276668 | MS.gene38709:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAAAAATTATGTTTATAT+AGG | + | chr3.3:84277129-84277148 | None:intergenic | 10.0% |
| !!! | AATAAATTTTGTAGATAAAA+AGG | + | chr3.3:84279074-84279093 | None:intergenic | 10.0% |
| !!! | ATAAATTTTGTAGATAAAAA+GGG | + | chr3.3:84279073-84279092 | None:intergenic | 10.0% |
| !!! | TATTTAACTTTTTTTATCTT+TGG | + | chr3.3:84279427-84279446 | None:intergenic | 10.0% |
| !! | AAAAATCAATTAATGTTTGA+AGG | - | chr3.3:84276839-84276858 | MS.gene38709:intron | 15.0% |
| !! | AAAAATTATGTTTATATAGG+TGG | + | chr3.3:84277126-84277145 | None:intergenic | 15.0% |
| !! | AAAATATTACCTTGAATATT+TGG | - | chr3.3:84275065-84275084 | MS.gene38709:CDS | 15.0% |
| !! | CCATTTATATAAATATAATC+CGG | + | chr3.3:84276294-84276313 | None:intergenic | 15.0% |
| !! | GATTATATTTATATAAATGG+TGG | - | chr3.3:84276294-84276313 | MS.gene38709:CDS | 15.0% |
| !! | TGAATCTATTTAAATTTCAA+GGG | + | chr3.3:84276608-84276627 | None:intergenic | 15.0% |
| !! | TTAGAAATGAAAACATTAAT+AGG | + | chr3.3:84279526-84279545 | None:intergenic | 15.0% |
| !! | TTATCTACAAAATTTATTCA+AGG | - | chr3.3:84279076-84279095 | MS.gene38709:intron | 15.0% |
| !! | TTGAAATTTAAATAGATTCA+CGG | - | chr3.3:84276608-84276627 | MS.gene38709:CDS | 15.0% |
| !!! | ATCTAATTGTATTTTTTAAC+TGG | + | chr3.3:84276360-84276379 | None:intergenic | 15.0% |
| !!! | CTTTGAAATTTAAATACTAT+GGG | + | chr3.3:84275412-84275431 | None:intergenic | 15.0% |
| !!! | GTTTTAATTTGTAACATATA+TGG | + | chr3.3:84276395-84276414 | None:intergenic | 15.0% |
| !!! | TCTTTGAAATTTAAATACTA+TGG | + | chr3.3:84275413-84275432 | None:intergenic | 15.0% |
| !!! | TTTTAAGAAAGAAAACAAAA+AGG | - | chr3.3:84276865-84276884 | MS.gene38709:intron | 15.0% |
| !!! | TTTTAATAAATATAGACCAT+TGG | - | chr3.3:84277033-84277052 | MS.gene38709:intron | 15.0% |
| !! | AAAATAGGTTTAGAGATTTA+AGG | + | chr3.3:84276497-84276516 | None:intergenic | 20.0% |
| !! | AAATTTATTCAAGGATCTAT+TGG | - | chr3.3:84279085-84279104 | MS.gene38709:intron | 20.0% |
| !! | CCGGATTATATTTATATAAA+TGG | - | chr3.3:84276291-84276310 | MS.gene38709:CDS | 20.0% |
| !! | GTGAATCTATTTAAATTTCA+AGG | + | chr3.3:84276609-84276628 | None:intergenic | 20.0% |
| !! | TCAACTAAAAAATTACAGTT+TGG | - | chr3.3:84274692-84274711 | MS.gene38709:intron | 20.0% |
| !! | TCAGTATTAAGATATTCAAA+TGG | + | chr3.3:84277338-84277357 | None:intergenic | 20.0% |
| !! | TCATTATCTTAAAGCTATTA+AGG | - | chr3.3:84274864-84274883 | MS.gene38709:intron | 20.0% |
| !! | TCTGTCAAAAAATAAAATCT+AGG | + | chr3.3:84279119-84279138 | None:intergenic | 20.0% |
| !! | TTAAAATTTGTGGAATTCTT+TGG | - | chr3.3:84278453-84278472 | MS.gene38709:intron | 20.0% |
| !!! | AAGAAATGTGCATTTTATAT+AGG | - | chr3.3:84275107-84275126 | MS.gene38709:intron | 20.0% |
| !!! | ACATTGATAATGATTTTAAG+TGG | + | chr3.3:84277586-84277605 | None:intergenic | 20.0% |
| !!! | CATTGATAATGATTTTAAGT+GGG | + | chr3.3:84277585-84277604 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTATCAATGTTGA+TGG | - | chr3.3:84276900-84276919 | MS.gene38709:intron | 20.0% |
| !!! | TGATTTTATTTTTACTACTC+AGG | - | chr3.3:84277421-84277440 | MS.gene38709:intron | 20.0% |
| !!! | TGTTTTCATTTCTAAATTGT+AGG | - | chr3.3:84279531-84279550 | MS.gene38709:intron | 20.0% |
| !!! | TGTTTTCTTCTCAATTTTAT+AGG | - | chr3.3:84274729-84274748 | MS.gene38709:intron | 20.0% |
| !!! | TTTCATAAGTTTTCTAAGAT+AGG | + | chr3.3:84275276-84275295 | None:intergenic | 20.0% |
| !!! | TTTTAGTTGAATTGTGAAAT+TGG | + | chr3.3:84274682-84274701 | None:intergenic | 20.0% |
| ! | AAGTTGAATATTGTATGTGT+TGG | - | chr3.3:84277673-84277692 | MS.gene38709:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | + | chr3.3:84275134-84275153 | None:intergenic | 25.0% |
| ! | ATACAATTAGATCAAATCTC+TGG | - | chr3.3:84276368-84276387 | MS.gene38709:intron | 25.0% |
| ! | ATATGATTTCTTCAAGGAAT+GGG | - | chr3.3:84279331-84279350 | MS.gene38709:CDS | 25.0% |
| ! | ATCAACATATCAAGTAACTT+TGG | + | chr3.3:84275605-84275624 | None:intergenic | 25.0% |
| ! | ATCTTTGGACATTATAGTAA+AGG | + | chr3.3:84279412-84279431 | None:intergenic | 25.0% |
| ! | ATGGAAGATAAATATTGAGT+TGG | + | chr3.3:84277848-84277867 | None:intergenic | 25.0% |
| ! | CATGCTTAAGTTAAAATTTG+TGG | - | chr3.3:84278443-84278462 | MS.gene38709:intron | 25.0% |
| ! | GTCAAAAAATAAAATCTAGG+TGG | + | chr3.3:84279116-84279135 | None:intergenic | 25.0% |
| ! | GTTGATGTAATTGAAAATTC+CGG | - | chr3.3:84278674-84278693 | MS.gene38709:intron | 25.0% |
| ! | TAAATAATAGTCGAACAACA+TGG | + | chr3.3:84279632-84279651 | None:intergenic | 25.0% |
| ! | TAAGAAAGAAAACAAAAAGG+AGG | - | chr3.3:84276868-84276887 | MS.gene38709:intron | 25.0% |
| ! | TACAAAATGCCAAATATTCA+AGG | + | chr3.3:84275077-84275096 | None:intergenic | 25.0% |
| ! | TACTGAACATAATTACGTAT+TGG | - | chr3.3:84279585-84279604 | MS.gene38709:CDS | 25.0% |
| ! | TCTAAAAGATGAATGAATGA+AGG | + | chr3.3:84275756-84275775 | None:intergenic | 25.0% |
| ! | TCTTTGGACATTATAGTAAA+GGG | + | chr3.3:84279411-84279430 | None:intergenic | 25.0% |
| ! | TGAAAACATAACCAAAACAA+AGG | + | chr3.3:84278261-84278280 | None:intergenic | 25.0% |
| ! | TGCATATAAGAAGAATTGTA+AGG | + | chr3.3:84275832-84275851 | None:intergenic | 25.0% |
| ! | TTATGTTGAACATCATGAAA+AGG | + | chr3.3:84278200-84278219 | None:intergenic | 25.0% |
| ! | TTCCATTTCTTTCATTTGAA+TGG | - | chr3.3:84277862-84277881 | MS.gene38709:intron | 25.0% |
| ! | TTCCTTCACTTAATAAAGTT+AGG | - | chr3.3:84278813-84278832 | MS.gene38709:intron | 25.0% |
| ! | TTCGACTATTATTTAGATGA+CGG | - | chr3.3:84279637-84279656 | MS.gene38709:CDS | 25.0% |
| ! | TTTCAAAGAGAATGTGATAT+TGG | - | chr3.3:84275424-84275443 | MS.gene38709:CDS | 25.0% |
| !! | TAAACCTATTTTCCATATGT+GGG | - | chr3.3:84276505-84276524 | MS.gene38709:CDS | 25.0% |
| !!! | ACATGTTTTTTTGTTCTTGA+TGG | - | chr3.3:84279366-84279385 | MS.gene38709:CDS | 25.0% |
| !!! | ACGTGAATTTTAACATTCTT+TGG | - | chr3.3:84276217-84276236 | MS.gene38709:CDS | 25.0% |
| !!! | AGATTATGTGTGGAATTTTT+TGG | + | chr3.3:84276426-84276445 | None:intergenic | 25.0% |
| !!! | ATAAATTTTGAGAGACTGTT+TGG | + | chr3.3:84275352-84275371 | None:intergenic | 25.0% |
| !!! | CATGTTTTTTTGTTCTTGAT+GGG | - | chr3.3:84279367-84279386 | MS.gene38709:CDS | 25.0% |
| !!! | TAAATTTTGAGAGACTGTTT+GGG | + | chr3.3:84275351-84275370 | None:intergenic | 25.0% |
| AAACAAATGTATCACTCCAA+AGG | - | chr3.3:84277160-84277179 | MS.gene38709:intron | 30.0% | |
| AACAAAAAGGAGGAATGAAA+AGG | - | chr3.3:84276878-84276897 | MS.gene38709:intron | 30.0% | |
| AACGATAAGCAAGATAAACT+AGG | + | chr3.3:84278414-84278433 | None:intergenic | 30.0% | |
| AAGGATTGTAGGATAAATAC+AGG | - | chr3.3:84275526-84275545 | MS.gene38709:CDS | 30.0% | |
| AATCTCTTACAAAACTTGAG+TGG | - | chr3.3:84278498-84278517 | MS.gene38709:intron | 30.0% | |
| AATTTATTCCCCAATGATAC+AGG | - | chr3.3:84277739-84277758 | MS.gene38709:intron | 30.0% | |
| ACACTAAAATGATTCAGAAC+AGG | + | chr3.3:84278320-84278339 | None:intergenic | 30.0% | |
| ACGATAAGCAAGATAAACTA+GGG | + | chr3.3:84278413-84278432 | None:intergenic | 30.0% | |
| ACGATGAAGTAATTTGACAA+GGG | + | chr3.3:84276556-84276575 | None:intergenic | 30.0% | |
| ACGTAATTATGTTCAGTAAC+AGG | + | chr3.3:84279583-84279602 | None:intergenic | 30.0% | |
| AGAAAGAAAGTGATGAAGAA+AGG | - | chr3.3:84276963-84276982 | MS.gene38709:intron | 30.0% | |
| AGGATTGTAGGATAAATACA+GGG | - | chr3.3:84275527-84275546 | MS.gene38709:CDS | 30.0% | |
| ATTTATTCCCCAATGATACA+GGG | - | chr3.3:84277740-84277759 | MS.gene38709:intron | 30.0% | |
| CAAAAACTCAATGCAAAAAG+AGG | + | chr3.3:84279174-84279193 | None:intergenic | 30.0% | |
| CACCATTCAAATGAAAGAAA+TGG | + | chr3.3:84277867-84277886 | None:intergenic | 30.0% | |
| CACTAAAATGATTCAGAACA+GGG | + | chr3.3:84278319-84278338 | None:intergenic | 30.0% | |
| CATATCAAGTAACTTTGGAT+TGG | + | chr3.3:84275600-84275619 | None:intergenic | 30.0% | |
| CATTATAGTAAAGGGGAAAA+TGG | + | chr3.3:84279403-84279422 | None:intergenic | 30.0% | |
| CTTGTGATATGATTTCTTCA+AGG | - | chr3.3:84279325-84279344 | MS.gene38709:CDS | 30.0% | |
| CTTTGGACATTATAGTAAAG+GGG | + | chr3.3:84279410-84279429 | None:intergenic | 30.0% | |
| GACCTAACTTTATTAAGTGA+AGG | + | chr3.3:84278818-84278837 | None:intergenic | 30.0% | |
| GATATGATTTCTTCAAGGAA+TGG | - | chr3.3:84279330-84279349 | MS.gene38709:CDS | 30.0% | |
| TAAGAGACTTAAGATGTGAA+GGG | + | chr3.3:84275962-84275981 | None:intergenic | 30.0% | |
| TAGTGTGACATCAAACATTT+GGG | - | chr3.3:84276660-84276679 | MS.gene38709:CDS | 30.0% | |
| TCCAAAGGATATAAAGGATT+CGG | - | chr3.3:84274957-84274976 | MS.gene38709:intron | 30.0% | |
| TCGACTATTATTTAGATGAC+GGG | - | chr3.3:84279638-84279657 | MS.gene38709:CDS | 30.0% | |
| TGGATTTATTGCAAATGAAC+TGG | + | chr3.3:84278374-84278393 | None:intergenic | 30.0% | |
| TGTTACTCTGGTAAAATCAT+TGG | - | chr3.3:84279295-84279314 | MS.gene38709:CDS | 30.0% | |
| TTAAGAGACTTAAGATGTGA+AGG | + | chr3.3:84275963-84275982 | None:intergenic | 30.0% | |
| TTCTATGCAAGTACATTATG+TGG | - | chr3.3:84277296-84277315 | MS.gene38709:intron | 30.0% | |
| ! | ACAGCAAAAGAAAATCCTTT+TGG | - | chr3.3:84275899-84275918 | MS.gene38709:intron | 30.0% |
| ! | CAAAACAACAAGTTGAAGAA+AGG | - | chr3.3:84277243-84277262 | MS.gene38709:intron | 30.0% |
| ! | CATTTTATATAGGTCCTGTT+TGG | - | chr3.3:84275117-84275136 | MS.gene38709:intron | 30.0% |
| ! | CTAAACCTATTTTCCATATG+TGG | - | chr3.3:84276504-84276523 | MS.gene38709:CDS | 30.0% |
| ! | CTTTTTGCATTGAGTTTTTG+TGG | - | chr3.3:84279174-84279193 | MS.gene38709:intron | 30.0% |
| ! | GATCAACCTAAGATTTTCTA+TGG | - | chr3.3:84278235-84278254 | MS.gene38709:CDS | 30.0% |
| ! | GCTTATCAACACAAATCTTT+TGG | + | chr3.3:84275489-84275508 | None:intergenic | 30.0% |
| !! | ATTTTCTATGGCCTTTGTTT+TGG | - | chr3.3:84278247-84278266 | MS.gene38709:CDS | 30.0% |
| !!! | AAATCGTTCCATTTTGATTG+AGG | - | chr3.3:84274753-84274772 | MS.gene38709:intron | 30.0% |
| !!! | AGGTTTAGCTTCTTTTTTGA+TGG | + | chr3.3:84274584-84274603 | None:intergenic | 30.0% |
| !!! | GTATTTTTTAACTGGTTCAC+CGG | + | chr3.3:84276352-84276371 | None:intergenic | 30.0% |
| !!! | TTTTTTGATGGAGAGGATAT+CGG | + | chr3.3:84274572-84274591 | None:intergenic | 30.0% |
| AAACTCAATGCAAAAAGAGG+AGG | + | chr3.3:84279171-84279190 | None:intergenic | 35.0% | |
| AAAGATTGCATACAGAGTGA+AGG | + | chr3.3:84277278-84277297 | None:intergenic | 35.0% | |
| AAAGGGATGATTCTTTACCT+TGG | + | chr3.3:84279056-84279075 | None:intergenic | 35.0% | |
| AAATGTGAATCTAGAAGCCA+AGG | - | chr3.3:84279036-84279055 | MS.gene38709:intron | 35.0% | |
| AACTTCACGTCCTTTCAAAT+GGG | - | chr3.3:84277940-84277959 | MS.gene38709:intron | 35.0% | |
| AAGAGTGAAGATGTTGTATC+TGG | - | chr3.3:84278037-84278056 | MS.gene38709:CDS | 35.0% | |
| AATGGTTCAAGATGTTACTC+TGG | - | chr3.3:84279283-84279302 | MS.gene38709:CDS | 35.0% | |
| AATTTGTGGAATTCTTTGGC+TGG | - | chr3.3:84278457-84278476 | MS.gene38709:intron | 35.0% | |
| ACACGAAATTTACTTCCAAC+TGG | - | chr3.3:84279785-84279804 | MS.gene38709:CDS | 35.0% | |
| ACCGAATCCTTTATATCCTT+TGG | + | chr3.3:84274961-84274980 | None:intergenic | 35.0% | |
| ACTCTTTGTTCAAGATGCTA+TGG | - | chr3.3:84277901-84277920 | MS.gene38709:intron | 35.0% | |
| AGAAATATGCTTGTCCATGA+TGG | + | chr3.3:84276758-84276777 | None:intergenic | 35.0% | |
| AGATACAACATCTTCACTCT+TGG | + | chr3.3:84278038-84278057 | None:intergenic | 35.0% | |
| AGCATGAATAGGAAACTTCT+TGG | - | chr3.3:84276793-84276812 | MS.gene38709:intron | 35.0% | |
| AGTAAATTTCGTGTCTTTCC+AGG | + | chr3.3:84279779-84279798 | None:intergenic | 35.0% | |
| AGTGTGACATCAAACATTTG+GGG | - | chr3.3:84276661-84276680 | MS.gene38709:CDS | 35.0% | |
| ATCTTGCTTATCGTTGTAGT+TGG | - | chr3.3:84278419-84278438 | MS.gene38709:intron | 35.0% | |
| ATTGTATGTGTTGGAGTAGA+AGG | - | chr3.3:84277682-84277701 | MS.gene38709:intron | 35.0% | |
| ATTTGGTTAGCAAGATTGCA+AGG | - | chr3.3:84276934-84276953 | MS.gene38709:intron | 35.0% | |
| CAAAGGCCATAGAAAATCTT+AGG | + | chr3.3:84278244-84278263 | None:intergenic | 35.0% | |
| CCAATCCATCATTCTCAATA+TGG | + | chr3.3:84279218-84279237 | None:intergenic | 35.0% | |
| CGATGAAGTAATTTGACAAG+GGG | + | chr3.3:84276555-84276574 | None:intergenic | 35.0% | |
| CTAGTGTGACATCAAACATT+TGG | - | chr3.3:84276659-84276678 | MS.gene38709:CDS | 35.0% | |
| CTCATAATTTGATGCTCAAG+AGG | - | chr3.3:84274998-84275017 | MS.gene38709:CDS | 35.0% | |
| CTTTCCCACATATGGAAAAT+AGG | + | chr3.3:84276512-84276531 | None:intergenic | 35.0% | |
| GAACATCATGAAAAGGTCAT+TGG | + | chr3.3:84278193-84278212 | None:intergenic | 35.0% | |
| GACGATGAAGTAATTTGACA+AGG | + | chr3.3:84276557-84276576 | None:intergenic | 35.0% | |
| GAGTAAATCACATAAAGAGC+TGG | + | chr3.3:84276071-84276090 | None:intergenic | 35.0% | |
| GAGTACCATATTGAGAATGA+TGG | - | chr3.3:84279210-84279229 | MS.gene38709:CDS | 35.0% | |
| GTGAACATCATCTTCCAATT+TGG | + | chr3.3:84277470-84277489 | None:intergenic | 35.0% | |
| GTTTATATAGGTGGCTTCTA+GGG | + | chr3.3:84277117-84277136 | None:intergenic | 35.0% | |
| TAAAATGATTCAGAACAGGG+AGG | + | chr3.3:84278316-84278335 | None:intergenic | 35.0% | |
| TAAATCACATAAAGAGCTGG+TGG | + | chr3.3:84276068-84276087 | None:intergenic | 35.0% | |
| TAACTTACCAGTGTCCTTAT+TGG | + | chr3.3:84276189-84276208 | None:intergenic | 35.0% | |
| TACGTTGCAGCTTCATAATT+TGG | - | chr3.3:84274828-84274847 | MS.gene38709:intron | 35.0% | |
| TCAGTATGGAATATCCTCTA+AGG | - | chr3.3:84279145-84279164 | MS.gene38709:intron | 35.0% | |
| TCCTCTTTATCTATGATAGC+CGG | + | chr3.3:84278632-84278651 | None:intergenic | 35.0% | |
| TCTTGCTTATCGTTGTAGTT+GGG | - | chr3.3:84278420-84278439 | MS.gene38709:intron | 35.0% | |
| TGATCAAACTTAGTCCTCTT+TGG | + | chr3.3:84278758-84278777 | None:intergenic | 35.0% | |
| TGTGAAATTGGATAAACCCT+AGG | + | chr3.3:84274670-84274689 | None:intergenic | 35.0% | |
| TGTGATTTACTCACAGCTAT+TGG | - | chr3.3:84276079-84276098 | MS.gene38709:intron | 35.0% | |
| TGTTTATATAGGTGGCTTCT+AGG | + | chr3.3:84277118-84277137 | None:intergenic | 35.0% | |
| TTCCAACTTTACTTCCAAAG+AGG | - | chr3.3:84278741-84278760 | MS.gene38709:intron | 35.0% | |
| TTCCTCAGAAGATTCCAAAT+CGG | - | chr3.3:84274486-84274505 | MS.gene38709:CDS | 35.0% | |
| TTGACAGATCAAGATCAGTA+TGG | - | chr3.3:84279131-84279150 | MS.gene38709:intron | 35.0% | |
| TTGCAATCTTGCTAACCAAA+TGG | + | chr3.3:84276935-84276954 | None:intergenic | 35.0% | |
| TTGCATAAGATGTCATTGTC+AGG | + | chr3.3:84277721-84277740 | None:intergenic | 35.0% | |
| TTGTAGGATAAATACAGGGT+TGG | - | chr3.3:84275531-84275550 | MS.gene38709:CDS | 35.0% | |
| TTGTGTTAGGAAAGGATTGT+AGG | - | chr3.3:84275515-84275534 | MS.gene38709:CDS | 35.0% | |
| TTTGAGTGCTTTCATGTCAT+GGG | - | chr3.3:84277782-84277801 | MS.gene38709:intron | 35.0% | |
| ! | AGGTTTAGAGATTTAAGGTC+TGG | + | chr3.3:84276492-84276511 | None:intergenic | 35.0% |
| ! | ATCGGAGATGATTGATTCAA+TGG | + | chr3.3:84274554-84274573 | None:intergenic | 35.0% |
| ! | CATTAATAGGTACTGTGAGT+TGG | + | chr3.3:84279513-84279532 | None:intergenic | 35.0% |
| ! | TCAACACAAATCTTTTGGTG+AGG | + | chr3.3:84275484-84275503 | None:intergenic | 35.0% |
| ! | TGGTTTTTCTGCTAAGAACA+AGG | + | chr3.3:84279003-84279022 | None:intergenic | 35.0% |
| ! | TGTGATGATGCAGGTATATT+AGG | + | chr3.3:84279466-84279485 | None:intergenic | 35.0% |
| ! | TTGGAATCTTCTGAGGAATT+GGG | + | chr3.3:84274484-84274503 | None:intergenic | 35.0% |
| ! | TTTGGAATCTTCTGAGGAAT+TGG | + | chr3.3:84274485-84274504 | None:intergenic | 35.0% |
| !! | AATGTGGTGTTATATCAGGT+TGG | - | chr3.3:84275676-84275695 | MS.gene38709:CDS | 35.0% |
| !! | ACTGAATGTGGTGTTATATC+AGG | - | chr3.3:84275672-84275691 | MS.gene38709:CDS | 35.0% |
| !! | CCATATTGAGAATGATGGAT+TGG | - | chr3.3:84279215-84279234 | MS.gene38709:CDS | 35.0% |
| !! | TGAAATTAAGCTAGCTTGCT+TGG | + | chr3.3:84278783-84278802 | None:intergenic | 35.0% |
| !! | TGATAGTTCTGATTTCTTGC+TGG | - | chr3.3:84278859-84278878 | MS.gene38709:intron | 35.0% |
| !! | TGATGGATTCAATTGCCATT+TGG | - | chr3.3:84276917-84276936 | MS.gene38709:intron | 35.0% |
| !! | TTGAGAATGATGGATTGGAA+TGG | - | chr3.3:84279220-84279239 | MS.gene38709:CDS | 35.0% |
| !! | TTGTTCGTTTTGTTCTTCCA+TGG | + | chr3.3:84274455-84274474 | None:intergenic | 35.0% |
| !!! | ACTGTTTTGAAGCAATTCGT+AGG | + | chr3.3:84274524-84274543 | None:intergenic | 35.0% |
| !!! | ATCGCCTTTTTTGAAACTCA+GGG | + | chr3.3:84278840-84278859 | None:intergenic | 35.0% |
| !!! | CTGTTTTGAAGCAATTCGTA+GGG | + | chr3.3:84274523-84274542 | None:intergenic | 35.0% |
| !!! | GTGATTTTTTTCTGCTTCAC+CGG | - | chr3.3:84277068-84277087 | MS.gene38709:intron | 35.0% |
| !!! | TAGCTTCTTTTTTGATGGAG+AGG | + | chr3.3:84274579-84274598 | None:intergenic | 35.0% |
| AAGGACAAATTGCACTACCT+TGG | - | chr3.3:84279672-84279691 | MS.gene38709:CDS | 40.0% | |
| AAGGAGAGGCAGAATTATTG+TGG | - | chr3.3:84276982-84277001 | MS.gene38709:intron | 40.0% | |
| AAGTCTCTCTCTTTCCATCA+TGG | - | chr3.3:84276741-84276760 | MS.gene38709:CDS | 40.0% | |
| AATCACGCATATGAGAGATG+TGG | + | chr3.3:84276454-84276473 | None:intergenic | 40.0% | |
| AGGAGAGGCAGAATTATTGT+GGG | - | chr3.3:84276983-84277002 | MS.gene38709:intron | 40.0% | |
| AGGGACTCTTGGAGATATAA+TGG | + | chr3.3:84278394-84278413 | None:intergenic | 40.0% | |
| AGGTCCCTGAGTTTCAAAAA+AGG | - | chr3.3:84278833-84278852 | MS.gene38709:intron | 40.0% | |
| ATATGCGTGATTGTGTTCGT+AGG | - | chr3.3:84276462-84276481 | MS.gene38709:CDS | 40.0% | |
| ATCACGCATATGAGAGATGT+GGG | + | chr3.3:84276453-84276472 | None:intergenic | 40.0% | |
| ATGGTCAGAGACGTAGAAAA+AGG | - | chr3.3:84277503-84277522 | MS.gene38709:intron | 40.0% | |
| CAAAAGCTTGAGCATCTTTC+AGG | + | chr3.3:84276154-84276173 | None:intergenic | 40.0% | |
| CAAGATAAACTAGGGACTCT+TGG | + | chr3.3:84278405-84278424 | None:intergenic | 40.0% | |
| CACATTTCTTTCATCTGCGT+TGG | + | chr3.3:84279023-84279042 | None:intergenic | 40.0% | |
| CAGATCAATAGGTTCTGCAA+AGG | + | chr3.3:84276117-84276136 | None:intergenic | 40.0% | |
| CCTACAATCTCCAGATCAAT+AGG | + | chr3.3:84276128-84276147 | None:intergenic | 40.0% | |
| CCTATTGATCTGGAGATTGT+AGG | - | chr3.3:84276125-84276144 | MS.gene38709:CDS | 40.0% | |
| CTGCAAACATCATGCAAAAC+TGG | - | chr3.3:84275875-84275894 | MS.gene38709:intron | 40.0% | |
| CTTTGCAGAACCTATTGATC+TGG | - | chr3.3:84276115-84276134 | MS.gene38709:CDS | 40.0% | |
| GAAAGTGATGAAGAAAGGAG+AGG | - | chr3.3:84276968-84276987 | MS.gene38709:intron | 40.0% | |
| GAACTTCACGTCCTTTCAAA+TGG | - | chr3.3:84277939-84277958 | MS.gene38709:intron | 40.0% | |
| GACTTGTCAGGAACTTCTTT+CGG | + | chr3.3:84275938-84275957 | None:intergenic | 40.0% | |
| GAGCTGATGAAAACAGCTTA+TGG | + | chr3.3:84275327-84275346 | None:intergenic | 40.0% | |
| GATAAGCCTGCTATTGTGTT+AGG | - | chr3.3:84275502-84275521 | MS.gene38709:CDS | 40.0% | |
| GCTCAATTTCGAGCTATATC+AGG | - | chr3.3:84275020-84275039 | MS.gene38709:CDS | 40.0% | |
| GCTTGTTTGAGCTTATATGC+TGG | + | chr3.3:84275376-84275395 | None:intergenic | 40.0% | |
| GGAGTAGAAGGATCTAATGA+TGG | - | chr3.3:84277694-84277713 | MS.gene38709:intron | 40.0% | |
| GGATGCTCCAAAGGATATAA+AGG | - | chr3.3:84274951-84274970 | MS.gene38709:intron | 40.0% | |
| GGTTTGCAATAGTCTCCAAA+AGG | + | chr3.3:84275917-84275936 | None:intergenic | 40.0% | |
| GTTCACGATGATGAAGAAGA+TGG | - | chr3.3:84277484-84277503 | MS.gene38709:intron | 40.0% | |
| GTTTGAGTGCTTTCATGTCA+TGG | - | chr3.3:84277781-84277800 | MS.gene38709:intron | 40.0% | |
| TATTCATGCTTCTCCTCTAC+CGG | + | chr3.3:84276783-84276802 | None:intergenic | 40.0% | |
| TCAGGCACAAGTTCAATATC+AGG | + | chr3.3:84274916-84274935 | None:intergenic | 40.0% | |
| TCCGGCTATCATAGATAAAG+AGG | - | chr3.3:84278628-84278647 | MS.gene38709:intron | 40.0% | |
| TCCTTTCCTAACACAATAGC+AGG | + | chr3.3:84275511-84275530 | None:intergenic | 40.0% | |
| TGAACTTCGTGCAATAGAAG+CGG | - | chr3.3:84279248-84279267 | MS.gene38709:CDS | 40.0% | |
| TGCAACGTAGTAAAATCCAC+CGG | + | chr3.3:84274817-84274836 | None:intergenic | 40.0% | |
| TGGACAAGCATATTTCTTCC+CGG | - | chr3.3:84276761-84276780 | MS.gene38709:CDS | 40.0% | |
| TGTCATGGATAGCTCCAAAT+TGG | - | chr3.3:84277453-84277472 | MS.gene38709:intron | 40.0% | |
| TTAAATACTATGGGCCTGCT+TGG | + | chr3.3:84275403-84275422 | None:intergenic | 40.0% | |
| TTCAAGAGCTAACAATGTCC+TGG | + | chr3.3:84277196-84277215 | None:intergenic | 40.0% | |
| TTGTATGCGTAATTCCTAGC+TGG | + | chr3.3:84276010-84276029 | None:intergenic | 40.0% | |
| ! | ACACTTTTGCAGGACAAAAG+AGG | + | chr3.3:84278524-84278543 | None:intergenic | 40.0% |
| ! | ACTGTGAGTTGGAGAAATCA+AGG | + | chr3.3:84279502-84279521 | None:intergenic | 40.0% |
| ! | AGATAAAGAGGAGCATGTTC+AGG | - | chr3.3:84278640-84278659 | MS.gene38709:intron | 40.0% |
| ! | AGCAACATTTGTGATGATGC+AGG | + | chr3.3:84279475-84279494 | None:intergenic | 40.0% |
| ! | AGGAATTGATTTCTTGCCTG+AGG | - | chr3.3:84277976-84277995 | MS.gene38709:intron | 40.0% |
| ! | AGTTTTTGTGGTAGACCTTC+TGG | - | chr3.3:84279186-84279205 | MS.gene38709:intron | 40.0% |
| ! | ATCTTCTGAGGAATTGGGAA+AGG | + | chr3.3:84274479-84274498 | None:intergenic | 40.0% |
| ! | GACTTTTGAATATACCCCCT+TGG | + | chr3.3:84277561-84277580 | None:intergenic | 40.0% |
| ! | GTCCTCTTTGGAAGTAAAGT+TGG | + | chr3.3:84278746-84278765 | None:intergenic | 40.0% |
| ! | GTTTTTGTGGTAGACCTTCT+GGG | - | chr3.3:84279187-84279206 | MS.gene38709:intron | 40.0% |
| ! | TCACGGCATTTTCTTCATGT+GGG | - | chr3.3:84276625-84276644 | MS.gene38709:CDS | 40.0% |
| ! | TGCCTGAAGAAGAGTTTTTC+CGG | - | chr3.3:84274929-84274948 | MS.gene38709:intron | 40.0% |
| ! | TTCACGGCATTTTCTTCATG+TGG | - | chr3.3:84276624-84276643 | MS.gene38709:CDS | 40.0% |
| ! | TTCTTGGGCAGATCTTTTAG+AGG | - | chr3.3:84279730-84279749 | MS.gene38709:CDS | 40.0% |
| ! | TTTTGTTCTTGATGGGAGTC+TGG | - | chr3.3:84279374-84279393 | MS.gene38709:CDS | 40.0% |
| ! | TTTTTGTGGTAGACCTTCTG+GGG | - | chr3.3:84279188-84279207 | MS.gene38709:intron | 40.0% |
| !! | AAATGGTGGATTCTAAGCTG+AGG | - | chr3.3:84276308-84276327 | MS.gene38709:CDS | 40.0% |
| !! | AATGGTGGATTCTAAGCTGA+GGG | - | chr3.3:84276309-84276328 | MS.gene38709:CDS | 40.0% |
| !! | AATTCTTTGGCTGGCTTACA+GGG | - | chr3.3:84278466-84278485 | MS.gene38709:intron | 40.0% |
| !! | AGACCATTGGTTCAATCTGA+CGG | - | chr3.3:84277046-84277065 | MS.gene38709:intron | 40.0% |
| !! | ATCCGATTTGGAATCTTCTG+AGG | + | chr3.3:84274491-84274510 | None:intergenic | 40.0% |
| !! | ATGACGGGTTATCATCTGAA+AGG | - | chr3.3:84279653-84279672 | MS.gene38709:CDS | 40.0% |
| !! | GAAAATTCCGGTGTCACAAA+AGG | - | chr3.3:84278686-84278705 | MS.gene38709:intron | 40.0% |
| !! | GGTGTTATATCAGGTTGGTT+TGG | - | chr3.3:84275681-84275700 | MS.gene38709:CDS | 40.0% |
| !! | TGGTTTGGCTTTAAGTATGC+TGG | - | chr3.3:84275696-84275715 | MS.gene38709:CDS | 40.0% |
| !! | TTATATCCTTTGGAGCATCC+CGG | + | chr3.3:84274951-84274970 | None:intergenic | 40.0% |
| !!! | ATTCCTAGCTGGTTTTGTAC+AGG | + | chr3.3:84275999-84276018 | None:intergenic | 40.0% |
| !!! | CATCGCCTTTTTTGAAACTC+AGG | + | chr3.3:84278841-84278860 | None:intergenic | 40.0% |
| !!! | CATTTTGATTGAGGAGGATC+GGG | - | chr3.3:84274762-84274781 | MS.gene38709:intron | 40.0% |
| !!! | CCATTTTGATTGAGGAGGAT+CGG | - | chr3.3:84274761-84274780 | MS.gene38709:intron | 40.0% |
| !!! | TCGTTCCATTTTGATTGAGG+AGG | - | chr3.3:84274756-84274775 | MS.gene38709:intron | 40.0% |
| AAACTTCACTAGGCACAGGT+AGG | + | chr3.3:84278604-84278623 | None:intergenic | 45.0% | |
| AACTTCACTAGGCACAGGTA+GGG | + | chr3.3:84278603-84278622 | None:intergenic | 45.0% | |
| AAGCGGAGGTAAGTACACAA+TGG | - | chr3.3:84279265-84279284 | MS.gene38709:CDS | 45.0% | |
| ACGTAGAAAAAGGCCAAGGA+GGG | - | chr3.3:84277513-84277532 | MS.gene38709:intron | 45.0% | |
| ACTCCCTTGTGCAAATTGGA+TGG | - | chr3.3:84278560-84278579 | MS.gene38709:intron | 45.0% | |
| AGAAGAAGGTTCAATCGCCA+TGG | - | chr3.3:84274435-84274454 | MS.gene38709:CDS | 45.0% | |
| AGAGACGTAGAAAAAGGCCA+AGG | - | chr3.3:84277509-84277528 | MS.gene38709:intron | 45.0% | |
| AGATCGCGAAGGAGTTGTTT+AGG | + | chr3.3:84274604-84274623 | None:intergenic | 45.0% | |
| AGCATATTTCTTCCCGGTAG+AGG | - | chr3.3:84276767-84276786 | MS.gene38709:CDS | 45.0% | |
| AGTCAAGCCAATAAGGACAC+TGG | - | chr3.3:84276179-84276198 | MS.gene38709:CDS | 45.0% | |
| ATTCATGCTTCTCCTCTACC+GGG | + | chr3.3:84276782-84276801 | None:intergenic | 45.0% | |
| CACAAAGTCTCTTTCGTGGA+TGG | - | chr3.3:84278955-84278974 | MS.gene38709:intron | 45.0% | |
| CAGCCATCCAATTTGCACAA+GGG | + | chr3.3:84278566-84278585 | None:intergenic | 45.0% | |
| CATCCACGAAAGAGACTTTG+TGG | + | chr3.3:84278957-84278976 | None:intergenic | 45.0% | |
| CCACATTCAGTTTGATCGAC+AGG | + | chr3.3:84275663-84275682 | None:intergenic | 45.0% | |
| CCGATCCTCCTCAATCAAAA+TGG | + | chr3.3:84274764-84274783 | None:intergenic | 45.0% | |
| CCTGTCGATCAAACTGAATG+TGG | - | chr3.3:84275660-84275679 | MS.gene38709:CDS | 45.0% | |
| CTCAAGGAGAAAAGCTCAGT+TGG | - | chr3.3:84278114-84278133 | MS.gene38709:CDS | 45.0% | |
| CTGCGAAACTCATTACGCTA+AGG | - | chr3.3:84277635-84277654 | MS.gene38709:intron | 45.0% | |
| CTGTCTGTACTCGATTCTGT+TGG | + | chr3.3:84278078-84278097 | None:intergenic | 45.0% | |
| CTTAGCGTAATGAGTTTCGC+AGG | + | chr3.3:84277637-84277656 | None:intergenic | 45.0% | |
| GAAGACGACTTTCCCACATA+TGG | + | chr3.3:84276520-84276539 | None:intergenic | 45.0% | |
| GAAGACGGTGAGATAGAAGA+AGG | - | chr3.3:84274421-84274440 | MS.gene38709:CDS | 45.0% | |
| GACGAAGAGTGATGAAGTGA+AGG | + | chr3.3:84274642-84274661 | None:intergenic | 45.0% | |
| GCAAGAAATCAATTCCTGCC+AGG | + | chr3.3:84277973-84277992 | None:intergenic | 45.0% | |
| GCATAAGCCAACATCAACCA+AGG | + | chr3.3:84279692-84279711 | None:intergenic | 45.0% | |
| GCCTGCTATTGTGTTAGGAA+AGG | - | chr3.3:84275507-84275526 | MS.gene38709:CDS | 45.0% | |
| GGAGCATGTTCAGGAATCAA+TGG | - | chr3.3:84278649-84278668 | MS.gene38709:intron | 45.0% | |
| GGATCGGGTTAAAATGCAGA+CGG | - | chr3.3:84274777-84274796 | MS.gene38709:intron | 45.0% | |
| GGCAGTGTATATTCTGACAC+CGG | - | chr3.3:84276272-84276291 | MS.gene38709:CDS | 45.0% | |
| GGCTCTATTAAGTCCATCAC+CGG | + | chr3.3:84277090-84277109 | None:intergenic | 45.0% | |
| GGGTGATTCTTCATCCGATT+TGG | + | chr3.3:84274503-84274522 | None:intergenic | 45.0% | |
| GTAATGAGTTTCGCAGGCTT+AGG | + | chr3.3:84277631-84277650 | None:intergenic | 45.0% | |
| GTCAGAATATACACTGCCAG+CGG | + | chr3.3:84276270-84276289 | None:intergenic | 45.0% | |
| TACGCTAAGGTTTGAGTACG+TGG | - | chr3.3:84277648-84277667 | MS.gene38709:intron | 45.0% | |
| TATGCAAGCCTGTTAGTGGT+GGG | - | chr3.3:84279707-84279726 | MS.gene38709:CDS | 45.0% | |
| TCAAACAAGCCAATCCAAGC+AGG | - | chr3.3:84275386-84275405 | MS.gene38709:CDS | 45.0% | |
| TCAATATGGTACTCCCCAGA+AGG | + | chr3.3:84279204-84279223 | None:intergenic | 45.0% | |
| TCACCGTCAGATTGAACCAA+TGG | + | chr3.3:84277052-84277071 | None:intergenic | 45.0% | |
| TCACTTCATCACTCTTCGTC+AGG | - | chr3.3:84274642-84274661 | MS.gene38709:CDS | 45.0% | |
| TCCCGGAAAAACTCTTCTTC+AGG | + | chr3.3:84274934-84274953 | None:intergenic | 45.0% | |
| TCCTGGCTGGATAATACCTT+TGG | + | chr3.3:84277179-84277198 | None:intergenic | 45.0% | |
| TGAATATACCCCCTTGGTCA+GGG | + | chr3.3:84277555-84277574 | None:intergenic | 45.0% | |
| TGTGGGAGTGAGATTATGTG+TGG | + | chr3.3:84276436-84276455 | None:intergenic | 45.0% | |
| TTATGCAAGCCTGTTAGTGG+TGG | - | chr3.3:84279706-84279725 | MS.gene38709:CDS | 45.0% | |
| TTCTGCAGAGAATTCGCTCA+AGG | - | chr3.3:84278098-84278117 | MS.gene38709:CDS | 45.0% | |
| TTCTTCATGTGGGGAACACT+AGG | - | chr3.3:84276635-84276654 | MS.gene38709:CDS | 45.0% | |
| TTGAATATACCCCCTTGGTC+AGG | + | chr3.3:84277556-84277575 | None:intergenic | 45.0% | |
| TTGCCTGTACAAAACCAGCT+AGG | - | chr3.3:84275993-84276012 | MS.gene38709:intron | 45.0% | |
| TTTGAGTAACGAGATCGCGA+AGG | + | chr3.3:84274615-84274634 | None:intergenic | 45.0% | |
| ! | CACGGCATTTTCTTCATGTG+GGG | - | chr3.3:84276626-84276645 | MS.gene38709:CDS | 45.0% |
| ! | CAGTTCTCCTTTTGTGACAC+CGG | + | chr3.3:84278696-84278715 | None:intergenic | 45.0% |
| ! | GCCTGAAGAAGAGTTTTTCC+GGG | - | chr3.3:84274930-84274949 | MS.gene38709:intron | 45.0% |
| ! | GGTAGAGGAGAAGCATGAAT+AGG | - | chr3.3:84276782-84276801 | MS.gene38709:intron | 45.0% |
| ! | TCTCTTTCGTGGATGGATTC+TGG | - | chr3.3:84278962-84278981 | MS.gene38709:intron | 45.0% |
| ! | TGCACTACCTTGGTTGATGT+TGG | - | chr3.3:84279682-84279701 | MS.gene38709:CDS | 45.0% |
| ! | TTTGGAGCTATCCATGACAG+TGG | + | chr3.3:84277452-84277471 | None:intergenic | 45.0% |
| ! | TTTTTCTGCTTCACCGGTGA+TGG | - | chr3.3:84277074-84277093 | MS.gene38709:intron | 45.0% |
| !! | ACAGCTATTGGCTCAGAAAG+AGG | - | chr3.3:84276091-84276110 | MS.gene38709:CDS | 45.0% |
| !! | CTTTTAGAGGAAGGGATCAC+CGG | - | chr3.3:84279743-84279762 | MS.gene38709:CDS | 45.0% |
| !! | GAATTCTTTGGCTGGCTTAC+AGG | - | chr3.3:84278465-84278484 | MS.gene38709:intron | 45.0% |
| !! | GACATGAAAGCACTCAAACC+TGG | + | chr3.3:84277780-84277799 | None:intergenic | 45.0% |
| !! | GGGCAGATCTTTTAGAGGAA+GGG | - | chr3.3:84279735-84279754 | MS.gene38709:CDS | 45.0% |
| !! | GTCCTGCAAAAGTGTTCCAT+GGG | - | chr3.3:84278529-84278548 | MS.gene38709:intron | 45.0% |
| !! | TCCAAAGGTATTATCCAGCC+AGG | - | chr3.3:84277175-84277194 | MS.gene38709:intron | 45.0% |
| !! | TGGGCAGATCTTTTAGAGGA+AGG | - | chr3.3:84279734-84279753 | MS.gene38709:CDS | 45.0% |
| !! | TGTCCTGCAAAAGTGTTCCA+TGG | - | chr3.3:84278528-84278547 | MS.gene38709:intron | 45.0% |
| !!! | TAGCTGGTTTTGTACAGGCA+AGG | + | chr3.3:84275994-84276013 | None:intergenic | 45.0% |
| AAGCTCGAGCCCTGTATCAT+TGG | + | chr3.3:84277752-84277771 | None:intergenic | 50.0% | |
| ACTTCGTGCAATAGAAGCGG+AGG | - | chr3.3:84279251-84279270 | MS.gene38709:CDS | 50.0% | |
| AGAGCTAACAATGTCCTGGC+TGG | + | chr3.3:84277192-84277211 | None:intergenic | 50.0% | |
| AGCTCGAGCCCTGTATCATT+GGG | + | chr3.3:84277751-84277770 | None:intergenic | 50.0% | |
| CACTCTTCGTCAGGTACCTA+GGG | - | chr3.3:84274651-84274670 | MS.gene38709:CDS | 50.0% | |
| CCAGCCATCCAATTTGCACA+AGG | + | chr3.3:84278567-84278586 | None:intergenic | 50.0% | |
| CCTTGTGCAAATTGGATGGC+TGG | - | chr3.3:84278564-84278583 | MS.gene38709:intron | 50.0% | |
| CTCAGGCATTTCCACTGTCA+TGG | - | chr3.3:84277438-84277457 | MS.gene38709:intron | 50.0% | |
| CTTTCCAGGAGATCGTCTTC+CGG | + | chr3.3:84279765-84279784 | None:intergenic | 50.0% | |
| GACGAAACTTCACTAGGCAC+AGG | + | chr3.3:84278608-84278627 | None:intergenic | 50.0% | |
| GACGTAGAAAAAGGCCAAGG+AGG | - | chr3.3:84277512-84277531 | MS.gene38709:intron | 50.0% | |
| GATGTGAAGGGAGACTTGTC+AGG | + | chr3.3:84275950-84275969 | None:intergenic | 50.0% | |
| GCAAAAAGAGGAGGCCTTAG+AGG | + | chr3.3:84279162-84279181 | None:intergenic | 50.0% | |
| GCACACTCCCTTGTGCAAAT+TGG | - | chr3.3:84278556-84278575 | MS.gene38709:intron | 50.0% | |
| GCCTAGTGAAGTTTCGTCTC+CGG | - | chr3.3:84278610-84278629 | MS.gene38709:intron | 50.0% | |
| GCTGCTTCACTGTTATCAGC+GGG | + | chr3.3:84278016-84278035 | None:intergenic | 50.0% | |
| GGCTCTATTAAATCCCTCGC+CGG | - | chr3.3:84276330-84276349 | MS.gene38709:intron | 50.0% | |
| GGCTGCTTCACTGTTATCAG+CGG | + | chr3.3:84278017-84278036 | None:intergenic | 50.0% | |
| GGCTTATGCAAGCCTGTTAG+TGG | - | chr3.3:84279703-84279722 | MS.gene38709:CDS | 50.0% | |
| GTGCCACAAAGTCTCTTTCG+TGG | - | chr3.3:84278951-84278970 | MS.gene38709:intron | 50.0% | |
| GTTACCAGTTCTATTGCCGC+TGG | - | chr3.3:84276251-84276270 | MS.gene38709:CDS | 50.0% | |
| TACTATGGGCCTGCTTGGAT+TGG | + | chr3.3:84275398-84275417 | None:intergenic | 50.0% | |
| TCACTCTTCGTCAGGTACCT+AGG | - | chr3.3:84274650-84274669 | MS.gene38709:CDS | 50.0% | |
| TCCTTGACTTCTACCCTCCT+TGG | + | chr3.3:84277529-84277548 | None:intergenic | 50.0% | |
| TGCTCGCAGTCAAGCCAATA+AGG | - | chr3.3:84276172-84276191 | MS.gene38709:CDS | 50.0% | |
| ! | AGCCCATGGAACACTTTTGC+AGG | + | chr3.3:84278534-84278553 | None:intergenic | 50.0% |
| ! | GTGGATGGATTCTGGTGTGA+AGG | - | chr3.3:84278970-84278989 | MS.gene38709:intron | 50.0% |
| ! | GTTGGCTCTTCTGTGAGTCA+CGG | - | chr3.3:84278132-84278151 | MS.gene38709:CDS | 50.0% |
| ! | GTTTTTCCGGGATGCTCCAA+AGG | - | chr3.3:84274942-84274961 | MS.gene38709:intron | 50.0% |
| ! | TTTAACTGGTTCACCGGCGA+GGG | + | chr3.3:84276346-84276365 | None:intergenic | 50.0% |
| ! | TTTCAAATGGGCTCAGCACC+TGG | - | chr3.3:84277952-84277971 | MS.gene38709:intron | 50.0% |
| !! | AGGTGCTGAGCCCATTTGAA+AGG | + | chr3.3:84277953-84277972 | None:intergenic | 50.0% |
| !! | ATAGGTGGCTTCTAGGGTGA+GGG | + | chr3.3:84277111-84277130 | None:intergenic | 50.0% |
| !! | CCTGTTAGTGGTGGGTTCTT+GGG | - | chr3.3:84279715-84279734 | MS.gene38709:CDS | 50.0% |
| !! | CGGTGTCACAAAAGGAGAAC+TGG | - | chr3.3:84278694-84278713 | MS.gene38709:intron | 50.0% |
| !! | GAAAGCACTCAAACCTGGTG+TGG | + | chr3.3:84277775-84277794 | None:intergenic | 50.0% |
| !! | TATAGGTGGCTTCTAGGGTG+AGG | + | chr3.3:84277112-84277131 | None:intergenic | 50.0% |
| !! | TTTTAACTGGTTCACCGGCG+AGG | + | chr3.3:84276347-84276366 | None:intergenic | 50.0% |
| ACTGCCAGCGGCAATAGAAC+TGG | + | chr3.3:84276258-84276277 | None:intergenic | 55.0% | |
| AGTAAAATCCACCGGCGCCT+TGG | + | chr3.3:84274809-84274828 | None:intergenic | 55.0% | |
| ATCACCGGAAGACGATCTCC+TGG | - | chr3.3:84279758-84279777 | MS.gene38709:CDS | 55.0% | |
| CCCAAGAACCCACCACTAAC+AGG | + | chr3.3:84279718-84279737 | None:intergenic | 55.0% | |
| CTGTTATCAGCGGGAAGCAG+TGG | + | chr3.3:84278007-84278026 | None:intergenic | 55.0% | |
| GCCAAGGAGGGTAGAAGTCA+AGG | - | chr3.3:84277525-84277544 | MS.gene38709:intron | 55.0% | |
| GCCGGAGACGAAACTTCACT+AGG | + | chr3.3:84278614-84278633 | None:intergenic | 55.0% | |
| GCTCGAGCCCTGTATCATTG+GGG | + | chr3.3:84277750-84277769 | None:intergenic | 55.0% | |
| GGCACAGGTAGGGCTCTTAT+AGG | + | chr3.3:84278593-84278612 | None:intergenic | 55.0% | |
| TCAAGGAGAGCCCTGACCAA+GGG | - | chr3.3:84277542-84277561 | MS.gene38709:intron | 55.0% | |
| ! | AAGGGAGTGTGCAAAGCCCA+TGG | + | chr3.3:84278548-84278567 | None:intergenic | 55.0% |
| !! | GCCTGTTAGTGGTGGGTTCT+TGG | - | chr3.3:84279714-84279733 | MS.gene38709:CDS | 55.0% |
| AAGGAGAGCCCTGACCAAGG+GGG | - | chr3.3:84277544-84277563 | MS.gene38709:intron | 60.0% | |
| AATGCAGACGGAACGCGCCA+AGG | - | chr3.3:84274789-84274808 | MS.gene38709:intron | 60.0% | |
| CAAGGAGAGCCCTGACCAAG+GGG | - | chr3.3:84277543-84277562 | MS.gene38709:intron | 60.0% | |
| GGAAGCAGTGGAGACACCTC+AGG | + | chr3.3:84277995-84278014 | None:intergenic | 60.0% | |
| GTCAAGGAGAGCCCTGACCA+AGG | - | chr3.3:84277541-84277560 | MS.gene38709:intron | 60.0% | |
| ! | AAATGGGCTCAGCACCTGGC+AGG | - | chr3.3:84277956-84277975 | MS.gene38709:intron | 60.0% |
| AGGGCTCGAGCTTCCACACC+AGG | - | chr3.3:84277759-84277778 | MS.gene38709:intron | 65.0% | |
| GACGGAACGCGCCAAGGCGC+CGG | - | chr3.3:84274795-84274814 | MS.gene38709:intron | 75.0% | |
| !!! | GGAACGCGCCAAGGCGCCGG+TGG | - | chr3.3:84274798-84274817 | MS.gene38709:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 84274418 | 84279816 | 84274418 | ID=MS.gene38709 |
| chr3.3 | mRNA | 84274418 | 84279816 | 84274418 | ID=MS.gene38709.t1;Parent=MS.gene38709 |
| chr3.3 | exon | 84279571 | 84279816 | 84279571 | ID=MS.gene38709.t1.exon1;Parent=MS.gene38709.t1 |
| chr3.3 | CDS | 84279571 | 84279816 | 84279571 | ID=cds.MS.gene38709.t1;Parent=MS.gene38709.t1 |
| chr3.3 | exon | 84279193 | 84279483 | 84279193 | ID=MS.gene38709.t1.exon2;Parent=MS.gene38709.t1 |
| chr3.3 | CDS | 84279193 | 84279483 | 84279193 | ID=cds.MS.gene38709.t1;Parent=MS.gene38709.t1 |
| chr3.3 | exon | 84278034 | 84278370 | 84278034 | ID=MS.gene38709.t1.exon3;Parent=MS.gene38709.t1 |
| chr3.3 | CDS | 84278034 | 84278370 | 84278034 | ID=cds.MS.gene38709.t1;Parent=MS.gene38709.t1 |
| chr3.3 | exon | 84276454 | 84276791 | 84276454 | ID=MS.gene38709.t1.exon4;Parent=MS.gene38709.t1 |
| chr3.3 | CDS | 84276454 | 84276791 | 84276454 | ID=cds.MS.gene38709.t1;Parent=MS.gene38709.t1 |
| chr3.3 | exon | 84276091 | 84276341 | 84276091 | ID=MS.gene38709.t1.exon5;Parent=MS.gene38709.t1 |
| chr3.3 | CDS | 84276091 | 84276341 | 84276091 | ID=cds.MS.gene38709.t1;Parent=MS.gene38709.t1 |
| chr3.3 | exon | 84275177 | 84275747 | 84275177 | ID=MS.gene38709.t1.exon6;Parent=MS.gene38709.t1 |
| chr3.3 | CDS | 84275177 | 84275747 | 84275177 | ID=cds.MS.gene38709.t1;Parent=MS.gene38709.t1 |
| chr3.3 | exon | 84274962 | 84275096 | 84274962 | ID=MS.gene38709.t1.exon7;Parent=MS.gene38709.t1 |
| chr3.3 | CDS | 84274962 | 84275096 | 84274962 | ID=cds.MS.gene38709.t1;Parent=MS.gene38709.t1 |
| chr3.3 | exon | 84274418 | 84274681 | 84274418 | ID=MS.gene38709.t1.exon8;Parent=MS.gene38709.t1 |
| chr3.3 | CDS | 84274418 | 84274681 | 84274418 | ID=cds.MS.gene38709.t1;Parent=MS.gene38709.t1 |
| Gene Sequence |
| Protein sequence |
