Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39404.t1 | XP_013457105.1 | 93.2 | 454 | 27 | 2 | 1 | 454 | 1 | 450 | 4.80E-240 | 840.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39404.t1 | Q38945 | 54.6 | 377 | 152 | 6 | 85 | 454 | 9 | 373 | 3.6e-103 | 376.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39404.t1 | A0A072UP28 | 93.2 | 454 | 27 | 2 | 1 | 454 | 1 | 450 | 3.5e-240 | 840.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene39404 | 0.805568 | 1.25E-49 | -1.69E-46 |
| MS.gene04918 | MS.gene39404 | 0.827055 | 1.93E-54 | -1.69E-46 |
| MS.gene04920 | MS.gene39404 | 0.807891 | 4.05E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene39404 | 0.843233 | 1.59E-58 | -1.69E-46 |
| MS.gene049283 | MS.gene39404 | 0.819691 | 1.02E-52 | -1.69E-46 |
| MS.gene049499 | MS.gene39404 | 0.830401 | 3.00E-55 | -1.69E-46 |
| MS.gene049711 | MS.gene39404 | 0.804091 | 2.55E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene39404 | 0.80728 | 5.46E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene39404 | 0.803675 | 3.11E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene39404 | 0.81293 | 3.31E-51 | -1.69E-46 |
| MS.gene051332 | MS.gene39404 | 0.808997 | 2.35E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene39404 | 0.806186 | 9.30E-50 | -1.69E-46 |
| MS.gene052016 | MS.gene39404 | 0.806498 | 7.99E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene39404 | 0.826168 | 3.15E-54 | -1.69E-46 |
| MS.gene052533 | MS.gene39404 | 0.8039 | 2.80E-49 | -1.69E-46 |
| MS.gene052534 | MS.gene39404 | 0.918362 | 1.71E-86 | -1.69E-46 |
| MS.gene052584 | MS.gene39404 | 0.818096 | 2.34E-52 | -1.69E-46 |
| MS.gene053321 | MS.gene39404 | 0.803098 | 4.10E-49 | -1.69E-46 |
| MS.gene054142 | MS.gene39404 | 0.812766 | 3.59E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene39404 | 0.809925 | 1.49E-50 | -1.69E-46 |
| MS.gene054576 | MS.gene39404 | 0.803344 | 3.65E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene39404 | 0.80786 | 4.11E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene39404 | 0.80343 | 3.50E-49 | -1.69E-46 |
| MS.gene054893 | MS.gene39404 | 0.809964 | 1.46E-50 | -1.69E-46 |
| MS.gene054991 | MS.gene39404 | 0.810907 | 9.13E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene39404 | 0.807482 | 4.95E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene39404 | 0.803662 | 3.13E-49 | -1.69E-46 |
| MS.gene055589 | MS.gene39404 | 0.809267 | 2.06E-50 | -1.69E-46 |
| MS.gene056776 | MS.gene39404 | 0.805222 | 1.48E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene39404 | 0.833658 | 4.70E-56 | -1.69E-46 |
| MS.gene056973 | MS.gene39404 | 0.805056 | 1.60E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene39404 | 0.800196 | 1.61E-48 | -1.69E-46 |
| MS.gene057208 | MS.gene39404 | 0.830888 | 2.28E-55 | -1.69E-46 |
| MS.gene057611 | MS.gene39404 | 0.813843 | 2.09E-51 | -1.69E-46 |
| MS.gene058781 | MS.gene39404 | 0.805678 | 1.19E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene39404 | 0.824132 | 9.53E-54 | -1.69E-46 |
| MS.gene05985 | MS.gene39404 | -0.840078 | 1.08E-57 | -1.69E-46 |
| MS.gene060365 | MS.gene39404 | 0.82323 | 1.55E-53 | -1.69E-46 |
| MS.gene060716 | MS.gene39404 | 0.805609 | 1.23E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene39404 | 0.819259 | 1.28E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene39404 | 0.817832 | 2.69E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene39404 | 0.829008 | 6.54E-55 | -1.69E-46 |
| MS.gene061188 | MS.gene39404 | 0.811916 | 5.51E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39404.t1 | MTR_4g090525 | 93.172 | 454 | 27 | 2 | 1 | 454 | 1 | 450 | 0.0 | 843 |
| MS.gene39404.t1 | MTR_2g012510 | 66.809 | 470 | 136 | 8 | 1 | 454 | 1 | 466 | 0.0 | 615 |
| MS.gene39404.t1 | MTR_8g464260 | 57.784 | 379 | 156 | 3 | 78 | 454 | 2 | 378 | 1.92e-154 | 443 |
| MS.gene39404.t1 | MTR_4g094672 | 34.797 | 296 | 161 | 7 | 133 | 426 | 1 | 266 | 1.78e-44 | 157 |
| MS.gene39404.t1 | MTR_2g011680 | 29.723 | 397 | 230 | 15 | 70 | 445 | 37 | 405 | 4.39e-31 | 124 |
| MS.gene39404.t1 | MTR_3g109970 | 60.000 | 60 | 23 | 1 | 129 | 187 | 6 | 65 | 1.66e-15 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39404.t1 | AT5G54390 | 55.968 | 377 | 147 | 6 | 85 | 454 | 9 | 373 | 3.40e-135 | 394 |
| MS.gene39404.t1 | AT5G63980 | 38.275 | 371 | 199 | 9 | 82 | 450 | 3 | 345 | 1.17e-67 | 220 |
| MS.gene39404.t1 | AT5G09290 | 35.588 | 340 | 180 | 6 | 82 | 419 | 3 | 305 | 4.27e-60 | 200 |
| MS.gene39404.t1 | AT5G64000 | 36.578 | 339 | 184 | 6 | 82 | 418 | 3 | 312 | 5.69e-60 | 200 |
| MS.gene39404.t1 | AT5G63990 | 33.062 | 369 | 214 | 9 | 82 | 448 | 3 | 340 | 8.23e-55 | 186 |
| MS.gene39404.t1 | AT5G64000 | 36.986 | 292 | 155 | 6 | 127 | 418 | 7 | 269 | 5.74e-51 | 175 |
| MS.gene39404.t1 | AT5G63990 | 30.408 | 319 | 192 | 6 | 82 | 398 | 3 | 293 | 3.98e-43 | 154 |
| MS.gene39404.t1 | AT4G05090 | 30.130 | 385 | 216 | 14 | 81 | 448 | 45 | 393 | 1.10e-29 | 120 |
Find 118 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGTGGTGGTTGGTGTTCT+TGG | 0.150165 | 4.2:+21623320 | MS.gene39404:CDS |
| GGATATTATCTGAATGTTTA+AGG | 0.159182 | 4.2:+21622997 | MS.gene39404:CDS |
| TGGCTCATAGTGTTGGTTTC+AGG | 0.179091 | 4.2:+21623639 | MS.gene39404:CDS |
| CTATCTGAAGCACCTTTATT+TGG | 0.179496 | 4.2:+21623122 | MS.gene39404:CDS |
| GGGTTCCTTCCGGAAGATTT+TGG | 0.189270 | 4.2:+21623216 | MS.gene39404:CDS |
| TGGCCACACAAACTTCTTAT+TGG | 0.235482 | 4.2:-21623510 | None:intergenic |
| AAGTCCTCTTGATGGCAAAA+TGG | 0.254030 | 4.2:+21623244 | MS.gene39404:CDS |
| AAACTATTCTTCTCCCTTGA+TGG | 0.310707 | 4.2:+21621669 | MS.gene39404:CDS |
| CTGGTTACAAAGAGAAAATA+TGG | 0.313107 | 4.2:+21624696 | MS.gene39404:CDS |
| AAGTGGTGGTTGGTGTTCTT+GGG | 0.325198 | 4.2:+21623321 | MS.gene39404:CDS |
| AAAGGTTCATCATATTTAGA+AGG | 0.326132 | 4.2:+21624800 | MS.gene39404:CDS |
| ATCATGCTCTTAACTCCTAA+TGG | 0.327765 | 4.2:-21624617 | None:intergenic |
| GGCAAAATGGGATTTGTAAA+TGG | 0.334467 | 4.2:+21623257 | MS.gene39404:CDS |
| GGTGCTTCAGCTCCAAATAA+AGG | 0.342554 | 4.2:-21623134 | None:intergenic |
| TGACAGCAACATCCAATTCT+TGG | 0.346167 | 4.2:-21621741 | None:intergenic |
| AGAGAAATATTCCCAAGAAT+TGG | 0.348039 | 4.2:+21621729 | MS.gene39404:CDS |
| TCCTTTCTCATAGGGTAGTT+AGG | 0.348690 | 4.2:-21623347 | None:intergenic |
| CCAAGCCAGTCCTTTCTCAT+AGG | 0.354628 | 4.2:-21623356 | None:intergenic |
| GAAGTTCCAAGAGGTGATTT+TGG | 0.359062 | 4.2:-21623155 | None:intergenic |
| GTTATCAGCAAAGTTATCAT+AGG | 0.362327 | 4.2:+21623378 | MS.gene39404:CDS |
| CTTGGATGACTTGGAAATCA+AGG | 0.362527 | 4.2:-21621809 | None:intergenic |
| GATATTATCTGAATGTTTAA+GGG | 0.393568 | 4.2:+21622998 | MS.gene39404:CDS |
| TGGGCACTAAGTCCTCTTGA+TGG | 0.407243 | 4.2:+21623236 | MS.gene39404:CDS |
| AATTAGCCTTCTCAACTGTT+TGG | 0.413234 | 4.2:-21623592 | None:intergenic |
| AGTTCCTTGGATTTCTCTAA+AGG | 0.418901 | 4.2:+21624782 | MS.gene39404:CDS |
| AACTCAGTTGGGGTTCCTTC+CGG | 0.426119 | 4.2:+21623206 | MS.gene39404:CDS |
| AGTCCTCTTGATGGCAAAAT+GGG | 0.427961 | 4.2:+21623245 | MS.gene39404:CDS |
| AGATGCTAGGGGCAGTTCCT+TGG | 0.429138 | 4.2:+21624769 | MS.gene39404:CDS |
| ATTGCAATCCTTGGATGACT+TGG | 0.429607 | 4.2:-21621818 | None:intergenic |
| TTAGTCACTTCAACTCAGTT+GGG | 0.432117 | 4.2:+21623195 | MS.gene39404:CDS |
| TTCCTCCAACATCTGAAACT+TGG | 0.438895 | 4.2:+21623417 | MS.gene39404:CDS |
| AGATGCTGTTGATGCTAGTT+GGG | 0.440882 | 4.2:+21624877 | MS.gene39404:CDS |
| GTATGCAGCAATAAACCATT+AGG | 0.441863 | 4.2:+21624602 | MS.gene39404:intron |
| TTTCCATGTTTCAATATATG+TGG | 0.446055 | 4.2:-21621529 | None:intergenic |
| CAAACTTCTTATTGGCATGA+TGG | 0.448268 | 4.2:-21623502 | None:intergenic |
| ACTTAGTGCCCAAAATCTTC+CGG | 0.450046 | 4.2:-21623225 | None:intergenic |
| TTGTGTAATTTATGCTAAGA+AGG | 0.451637 | 4.2:+21623448 | MS.gene39404:CDS |
| GACAGCAACATCCAATTCTT+GGG | 0.457973 | 4.2:-21621740 | None:intergenic |
| GACATAGAGAGCAAGCCATC+TGG | 0.458291 | 4.2:-21621771 | None:intergenic |
| GACTGAAGAATTGCAATCCT+TGG | 0.459995 | 4.2:-21621827 | None:intergenic |
| GGCACAAAGTGGCCAATCCT+AGG | 0.464271 | 4.2:-21623571 | None:intergenic |
| ATTAGTCACTTCAACTCAGT+TGG | 0.470594 | 4.2:+21623194 | MS.gene39404:CDS |
| TTTATGAAGTTTGCAAGGAC+TGG | 0.487950 | 4.2:+21624677 | MS.gene39404:CDS |
| AATTCTTCAGTCACAGTGGC+AGG | 0.491383 | 4.2:+21621838 | MS.gene39404:CDS |
| GAAGCACCAAAATCACCTCT+TGG | 0.492396 | 4.2:+21623149 | MS.gene39404:CDS |
| TTGTCTGTCCTCCTCCATCA+AGG | 0.493783 | 4.2:-21621683 | None:intergenic |
| TTGTTCCAAGTTTCAGATGT+TGG | 0.495725 | 4.2:-21623422 | None:intergenic |
| TTCTGTTGACAACCTAGGAT+TGG | 0.496418 | 4.2:+21623559 | MS.gene39404:CDS |
| TCAAGTCACTCCTTTACTGA+TGG | 0.510127 | 4.2:+21623614 | MS.gene39404:CDS |
| CGTGGTATAGTTGCTTGTGC+TGG | 0.511205 | 4.2:+21624830 | MS.gene39404:CDS |
| TAGATGCTGTTGATGCTAGT+TGG | 0.511648 | 4.2:+21624876 | MS.gene39404:CDS |
| AAGGTTCATCATATTTAGAA+GGG | 0.514547 | 4.2:+21624801 | MS.gene39404:CDS |
| CAAAACCAATGTGGCTTGAG+TGG | 0.516596 | 4.2:-21621630 | None:intergenic |
| ATTTATGCTAAGAAGGATAG+TGG | 0.517265 | 4.2:+21623455 | MS.gene39404:CDS |
| CTTGATTTCCAAGTCATCCA+AGG | 0.520875 | 4.2:+21621810 | MS.gene39404:CDS |
| GTGGTTCTTATGATGATTGA+AGG | 0.521080 | 4.2:-21621611 | None:intergenic |
| AGAAGGATAGTGGCAAGGCT+TGG | 0.526645 | 4.2:+21623465 | MS.gene39404:CDS |
| CAAGCCAGTCCTTTCTCATA+GGG | 0.529436 | 4.2:-21623355 | None:intergenic |
| TGGTATGTTTGCACGGATGA+TGG | 0.531015 | 4.2:-21621509 | None:intergenic |
| AGGCACAGTAACAGATGCTA+GGG | 0.531099 | 4.2:+21624757 | MS.gene39404:CDS |
| TTCTTCTCCCTTGATGGAGG+AGG | 0.534323 | 4.2:+21621675 | MS.gene39404:CDS |
| TCACTCCTTTACTGATGGAC+TGG | 0.535510 | 4.2:+21623619 | MS.gene39404:CDS |
| TTCATCATCATACAAGAGGC+AGG | 0.536972 | 4.2:+21624734 | MS.gene39404:CDS |
| CAGTTCAGATGCATTAGTGT+TGG | 0.540345 | 4.2:-21623066 | None:intergenic |
| TCCTAACTACCCTATGAGAA+AGG | 0.540601 | 4.2:+21623346 | MS.gene39404:CDS |
| CTGTCTTCTGTTGACAACCT+AGG | 0.542023 | 4.2:+21623554 | MS.gene39404:CDS |
| TATCTCTATTCTAGCTGAAG+AGG | 0.543770 | 4.2:+21623028 | MS.gene39404:CDS |
| GAGGCACAGTAACAGATGCT+AGG | 0.548507 | 4.2:+21624756 | MS.gene39404:CDS |
| AGATGTTGGAGGAATCAACT+TGG | 0.552028 | 4.2:-21623408 | None:intergenic |
| ATGAGCCAGTCCATCAGTAA+AGG | 0.555704 | 4.2:-21623624 | None:intergenic |
| GATGGACTGGCTCATAGTGT+TGG | 0.557460 | 4.2:+21623632 | MS.gene39404:CDS |
| AAAATATGGGATCATGCTGC+TGG | 0.560447 | 4.2:+21624710 | MS.gene39404:CDS |
| GATGGAGGAGGACAGACAAA+TGG | 0.563044 | 4.2:+21621687 | MS.gene39404:CDS |
| CTCAACTGTTTGGCACAAAG+TGG | 0.566181 | 4.2:-21623582 | None:intergenic |
| GCTTTATCACTCATAGAGGA+TGG | 0.566527 | 4.2:+21623296 | MS.gene39404:CDS |
| AATATGTGGCACTAGCTTGT+GGG | 0.570610 | 4.2:+21624642 | MS.gene39404:CDS |
| AGGTGTTTATGAAGTTTGCA+AGG | 0.574277 | 4.2:+21624672 | MS.gene39404:CDS |
| ATATATTGAAACATGGAAAG+AGG | 0.574367 | 4.2:+21621533 | MS.gene39404:CDS |
| TGGCATGATGGATCAGTGGT+TGG | 0.576849 | 4.2:-21623490 | None:intergenic |
| ATCACCTCTTGGAACTTCAG+AGG | 0.579400 | 4.2:+21623160 | MS.gene39404:CDS |
| TTATTGGCATGATGGATCAG+TGG | 0.580390 | 4.2:-21623494 | None:intergenic |
| ATATTATCTGAATGTTTAAG+GGG | 0.582727 | 4.2:+21622999 | MS.gene39404:CDS |
| TAAGAGCATGATGAAATATG+TGG | 0.583970 | 4.2:+21624628 | MS.gene39404:CDS |
| TGCTAAGAAGGATAGTGGCA+AGG | 0.584190 | 4.2:+21623460 | MS.gene39404:CDS |
| TTCCAAGTTTCAGATGTTGG+AGG | 0.584571 | 4.2:-21623419 | None:intergenic |
| TGCTGTCAGAGCAGTCCAGA+TGG | 0.584710 | 4.2:+21621756 | MS.gene39404:CDS |
| TTTGTGCCAAACAGTTGAGA+AGG | 0.587281 | 4.2:+21623586 | MS.gene39404:CDS |
| TAGTCACTTCAACTCAGTTG+GGG | 0.588518 | 4.2:+21623196 | MS.gene39404:CDS |
| TGGTTACAAAGAGAAAATAT+GGG | 0.593622 | 4.2:+21624697 | MS.gene39404:CDS |
| GTTAGCTCAAAGGCTAGAAG+AGG | 0.593814 | 4.2:-21624900 | None:intergenic |
| GTGTCAAAGCAATTGTGAGC+TGG | 0.594825 | 4.2:+21622976 | MS.gene39404:CDS |
| CTATTCTTCTCCCTTGATGG+AGG | 0.595372 | 4.2:+21621672 | MS.gene39404:CDS |
| TGTCTGTCCTCCTCCATCAA+GGG | 0.596724 | 4.2:-21621682 | None:intergenic |
| AAGAACCACTCAAGCCACAT+TGG | 0.597231 | 4.2:+21621625 | MS.gene39404:CDS |
| AAATATGTGGCACTAGCTTG+TGG | 0.599637 | 4.2:+21624641 | MS.gene39404:CDS |
| ACATCTGAAACTTGGAACAA+AGG | 0.601359 | 4.2:+21623425 | MS.gene39404:CDS |
| CTCTATTCTAGCTGAAGAGG+AGG | 0.606843 | 4.2:+21623031 | MS.gene39404:CDS |
| ACTAGCTTGTGGGGATGCAG+AGG | 0.607440 | 4.2:+21624652 | MS.gene39404:CDS |
| ACTCATAGAGGATGGAGAAG+TGG | 0.616161 | 4.2:+21623304 | MS.gene39404:CDS |
| GAGGATGGAGAAGTGGTGGT+TGG | 0.616166 | 4.2:+21623311 | MS.gene39404:CDS |
| TGTAGCTTTATCACTCATAG+AGG | 0.619534 | 4.2:+21623292 | MS.gene39404:CDS |
| ATATATGTGGTATGTTTGCA+CGG | 0.620727 | 4.2:-21621516 | None:intergenic |
| CATAGAGGATGGAGAAGTGG+TGG | 0.626150 | 4.2:+21623307 | MS.gene39404:CDS |
| GAGGAGGACAGACAAATGGT+TGG | 0.631552 | 4.2:+21621691 | MS.gene39404:CDS |
| CCTATGAGAAAGGACTGGCT+TGG | 0.633960 | 4.2:+21623356 | MS.gene39404:CDS |
| TGGTTTCATCATCATACAAG+AGG | 0.641288 | 4.2:+21624730 | MS.gene39404:CDS |
| TATTTAGAAGGGATTGATCG+TGG | 0.644276 | 4.2:+21624812 | MS.gene39404:CDS |
| ATACCACATATATTGAAACA+TGG | 0.649185 | 4.2:+21621526 | MS.gene39404:CDS |
| AGTGCCCAAAATCTTCCGGA+AGG | 0.664161 | 4.2:-21623221 | None:intergenic |
| ACTACCCTATGAGAAAGGAC+TGG | 0.670981 | 4.2:+21623351 | MS.gene39404:CDS |
| ATATGTGGCACTAGCTTGTG+GGG | 0.671425 | 4.2:+21624643 | MS.gene39404:CDS |
| TGAACCTTTAGAGAAATCCA+AGG | 0.676390 | 4.2:-21624786 | None:intergenic |
| ATGCCAATAAGAAGTTTGTG+TGG | 0.676415 | 4.2:+21623507 | MS.gene39404:CDS |
| AGAACCTCTGAAGTTCCAAG+AGG | 0.703572 | 4.2:-21623164 | None:intergenic |
| GGCACAGTAACAGATGCTAG+GGG | 0.716087 | 4.2:+21624758 | MS.gene39404:CDS |
| TTGCAATTCTTCAGTCACAG+TGG | 0.721000 | 4.2:+21621834 | MS.gene39404:CDS |
| ATTTCGACACAAAACCAATG+TGG | 0.721385 | 4.2:-21621639 | None:intergenic |
| ATCATCATACAAGAGGCAGG+AGG | 0.725638 | 4.2:+21624737 | MS.gene39404:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATAAAAAAAATAAAAA+AGG | - | chr4.2:21622558-21622577 | None:intergenic | 0.0% |
| !! | AAAAACTATTATTCTCTTAT+AGG | - | chr4.2:21624552-21624571 | None:intergenic | 15.0% |
| !! | AATATATTGTGTAAAAAACA+AGG | + | chr4.2:21622460-21622479 | MS.gene39404:intron | 15.0% |
| !! | TTAAAATATCACTTGTAAAA+AGG | + | chr4.2:21624507-21624526 | MS.gene39404:intron | 15.0% |
| !!! | TCTTAAAAACAAAATTTTGA+TGG | + | chr4.2:21622274-21622293 | MS.gene39404:intron | 15.0% |
| !! | AAAAAATAAAAAAGGCAGTT+CGG | - | chr4.2:21622550-21622569 | None:intergenic | 20.0% |
| !! | AATAAGTGGTTAATTACATT+CGG | + | chr4.2:21622673-21622692 | MS.gene39404:intron | 20.0% |
| !! | AATATGCTAAATATATAGGT+TGG | + | chr4.2:21622952-21622971 | MS.gene39404:intron | 20.0% |
| !! | ACTAAACAAATAGAAAACAT+GGG | - | chr4.2:21623783-21623802 | None:intergenic | 20.0% |
| !! | ATATTATCTGAATGTTTAAG+GGG | + | chr4.2:21622999-21623018 | MS.gene39404:CDS | 20.0% |
| !! | ATTCCATATAAATCCATATA+TGG | - | chr4.2:21621953-21621972 | None:intergenic | 20.0% |
| !! | GATATTATCTGAATGTTTAA+GGG | + | chr4.2:21622998-21623017 | MS.gene39404:CDS | 20.0% |
| !! | TGTCAATATGCTAAATATAT+AGG | + | chr4.2:21622948-21622967 | MS.gene39404:intron | 20.0% |
| !! | TTCTATTTGTTTAGTCAATA+AGG | + | chr4.2:21623788-21623807 | MS.gene39404:intron | 20.0% |
| !!! | AAAATCATTTGAAACTTCAA+TGG | + | chr4.2:21623998-21624017 | MS.gene39404:intron | 20.0% |
| !!! | AAATCATTTGAAACTTCAAT+GGG | + | chr4.2:21623999-21624018 | MS.gene39404:intron | 20.0% |
| !!! | ACAAAATTTTGATGGTAAAA+TGG | + | chr4.2:21622282-21622301 | MS.gene39404:intron | 20.0% |
| !!! | TCTTTTGATATTTATCTTGT+GGG | + | chr4.2:21623706-21623725 | MS.gene39404:intron | 20.0% |
| ! | AAAGGTTCATCATATTTAGA+AGG | + | chr4.2:21624800-21624819 | MS.gene39404:CDS | 25.0% |
| ! | AAAGTCAATGAAAAACTGTT+TGG | + | chr4.2:21622216-21622235 | MS.gene39404:intron | 25.0% |
| ! | AAGGTTCATCATATTTAGAA+GGG | + | chr4.2:21624801-21624820 | MS.gene39404:CDS | 25.0% |
| ! | AATGGAAAATGATAAAGACT+TGG | + | chr4.2:21622300-21622319 | MS.gene39404:intron | 25.0% |
| ! | AATTAAGTGATAAAGCTTTG+CGG | - | chr4.2:21623929-21623948 | None:intergenic | 25.0% |
| ! | ACTAAAAAAAAGGAAGGAAA+AGG | + | chr4.2:21624104-21624123 | MS.gene39404:intron | 25.0% |
| ! | ATAAATATCAAAAGACAGGA+AGG | - | chr4.2:21623701-21623720 | None:intergenic | 25.0% |
| ! | ATACCACATATATTGAAACA+TGG | + | chr4.2:21621526-21621545 | MS.gene39404:CDS | 25.0% |
| ! | ATATATTGAAACATGGAAAG+AGG | + | chr4.2:21621533-21621552 | MS.gene39404:CDS | 25.0% |
| ! | ATTGCTAATACAGTACTATA+AGG | + | chr4.2:21624385-21624404 | MS.gene39404:intron | 25.0% |
| ! | CAAGATAAATATCAAAAGAC+AGG | - | chr4.2:21623705-21623724 | None:intergenic | 25.0% |
| ! | CTTGAAAAACTTTGATATTG+CGG | + | chr4.2:21623891-21623910 | MS.gene39404:intron | 25.0% |
| ! | GAAAAGTGACTGTTATATAA+AGG | + | chr4.2:21622242-21622261 | MS.gene39404:intron | 25.0% |
| ! | GACTAAACAAATAGAAAACA+TGG | - | chr4.2:21623784-21623803 | None:intergenic | 25.0% |
| ! | GGATATTATCTGAATGTTTA+AGG | + | chr4.2:21622997-21623016 | MS.gene39404:CDS | 25.0% |
| ! | GTGTAAGTTCGATAAAAATA+AGG | - | chr4.2:21624166-21624185 | None:intergenic | 25.0% |
| ! | TAGCCATATATGGATTTATA+TGG | + | chr4.2:21621947-21621966 | MS.gene39404:intron | 25.0% |
| ! | TGGTTACAAAGAGAAAATAT+GGG | + | chr4.2:21624697-21624716 | MS.gene39404:CDS | 25.0% |
| ! | TTACACAATATATTGTTTCC+AGG | - | chr4.2:21622454-21622473 | None:intergenic | 25.0% |
| ! | TTATTATGAAGTGACAAAAG+AGG | + | chr4.2:21622125-21622144 | MS.gene39404:intron | 25.0% |
| ! | TTGTGTAATTTATGCTAAGA+AGG | + | chr4.2:21623448-21623467 | MS.gene39404:CDS | 25.0% |
| ! | TTTCCATGTTTCAATATATG+TGG | - | chr4.2:21621532-21621551 | None:intergenic | 25.0% |
| !! | AAACATTTTCTGATACAAAC+AGG | + | chr4.2:21622153-21622172 | MS.gene39404:intron | 25.0% |
| !! | AACTTGATTTTGCTTCTATA+TGG | - | chr4.2:21621579-21621598 | None:intergenic | 25.0% |
| !! | AATGTTTATGTTAGTTTCCA+AGG | + | chr4.2:21622771-21622790 | MS.gene39404:intron | 25.0% |
| !! | ACTTTTATCTTAGCCATATA+TGG | + | chr4.2:21621937-21621956 | MS.gene39404:intron | 25.0% |
| !! | CTTGATAGAGTATTTAAGTT+TGG | + | chr4.2:21622363-21622382 | MS.gene39404:intron | 25.0% |
| !! | CTTTTGATATTTATCTTGTG+GGG | + | chr4.2:21623707-21623726 | MS.gene39404:intron | 25.0% |
| !! | GTCTTTTGATATTTATCTTG+TGG | + | chr4.2:21623705-21623724 | MS.gene39404:intron | 25.0% |
| !! | GTTTTTAAACATTCCAACAT+GGG | + | chr4.2:21623736-21623755 | MS.gene39404:intron | 25.0% |
| !! | TATGATCTTTTCATGTAATG+TGG | - | chr4.2:21624858-21624877 | None:intergenic | 25.0% |
| !! | TTTTTAAACATTCCAACATG+GGG | + | chr4.2:21623737-21623756 | MS.gene39404:intron | 25.0% |
| !!! | GTTTTAGATTGCAATAACTT+TGG | + | chr4.2:21621988-21622007 | MS.gene39404:intron | 25.0% |
| AAATGTTTATTAACCGAGGT+TGG | + | chr4.2:21622734-21622753 | MS.gene39404:intron | 30.0% | |
| AACATGGGAATAATCCAAAT+AGG | - | chr4.2:21623768-21623787 | None:intergenic | 30.0% | |
| ACTGTATTAGCAATGATGAT+TGG | - | chr4.2:21624379-21624398 | None:intergenic | 30.0% | |
| AGAGAAATATTCCCAAGAAT+TGG | + | chr4.2:21621729-21621748 | MS.gene39404:CDS | 30.0% | |
| ATATATGTGGTATGTTTGCA+CGG | - | chr4.2:21621519-21621538 | None:intergenic | 30.0% | |
| ATTGTCTAGTCCATATTGAT+CGG | + | chr4.2:21622331-21622350 | MS.gene39404:intron | 30.0% | |
| ATTTATGCTAAGAAGGATAG+TGG | + | chr4.2:21623455-21623474 | MS.gene39404:CDS | 30.0% | |
| CAGTTGACTAAAAAAAAGGA+AGG | + | chr4.2:21624098-21624117 | MS.gene39404:intron | 30.0% | |
| CTGGTTACAAAGAGAAAATA+TGG | + | chr4.2:21624696-21624715 | MS.gene39404:CDS | 30.0% | |
| GCTAACACACTTTAAATAAG+TGG | + | chr4.2:21622659-21622678 | MS.gene39404:intron | 30.0% | |
| GTACAATACACCAAAATAGT+GGG | + | chr4.2:21622492-21622511 | MS.gene39404:intron | 30.0% | |
| GTGTCAGTTGACTAAAAAAA+AGG | + | chr4.2:21624094-21624113 | MS.gene39404:intron | 30.0% | |
| GTTATCAGCAAAGTTATCAT+AGG | + | chr4.2:21623378-21623397 | MS.gene39404:CDS | 30.0% | |
| TAATATGCAGACAAGTTCTA+CGG | + | chr4.2:21623952-21623971 | MS.gene39404:intron | 30.0% | |
| ! | GGTTTTTAAACATTCCAACA+TGG | + | chr4.2:21623735-21623754 | MS.gene39404:intron | 30.0% |
| ! | TAAGAGCATGATGAAATATG+TGG | + | chr4.2:21624628-21624647 | MS.gene39404:CDS | 30.0% |
| AAACTATTCTTCTCCCTTGA+TGG | + | chr4.2:21621669-21621688 | MS.gene39404:CDS | 35.0% | |
| AAATAGGAATAACCCCATGT+TGG | - | chr4.2:21623752-21623771 | None:intergenic | 35.0% | |
| AACATGGGGTTATTCCTATT+TGG | + | chr4.2:21623751-21623770 | MS.gene39404:intron | 35.0% | |
| AATTATGACAAGTGGCTTCT+TGG | + | chr4.2:21622100-21622119 | MS.gene39404:intron | 35.0% | |
| ACATCTACTGATCAGTCTAT+TGG | + | chr4.2:21622865-21622884 | MS.gene39404:intron | 35.0% | |
| AGGCAAATGTTTATTAACCG+AGG | + | chr4.2:21622730-21622749 | MS.gene39404:intron | 35.0% | |
| AGGTGTTTATGAAGTTTGCA+AGG | + | chr4.2:21624672-21624691 | MS.gene39404:CDS | 35.0% | |
| AGTTCCTTGGATTTCTCTAA+AGG | + | chr4.2:21624782-21624801 | MS.gene39404:CDS | 35.0% | |
| ATATTTATCTTGTGGGGTTG+TGG | + | chr4.2:21623713-21623732 | MS.gene39404:intron | 35.0% | |
| ATCAAATACGACCTTAATCG+TGG | + | chr4.2:21623859-21623878 | MS.gene39404:intron | 35.0% | |
| ATCATGCTCTTAACTCCTAA+TGG | - | chr4.2:21624620-21624639 | None:intergenic | 35.0% | |
| ATGCCAATAAGAAGTTTGTG+TGG | + | chr4.2:21623507-21623526 | MS.gene39404:CDS | 35.0% | |
| ATGCGGTAAACAACTTTGAT+AGG | - | chr4.2:21624310-21624329 | None:intergenic | 35.0% | |
| ATGGGACATATGTTGTCTTA+CGG | + | chr4.2:21624017-21624036 | MS.gene39404:intron | 35.0% | |
| ATTAGTCACTTCAACTCAGT+TGG | + | chr4.2:21623194-21623213 | MS.gene39404:CDS | 35.0% | |
| ATTTCGACACAAAACCAATG+TGG | - | chr4.2:21621642-21621661 | None:intergenic | 35.0% | |
| CAAACTTCTTATTGGCATGA+TGG | - | chr4.2:21623505-21623524 | None:intergenic | 35.0% | |
| CGTACAATACACCAAAATAG+TGG | + | chr4.2:21622491-21622510 | MS.gene39404:intron | 35.0% | |
| CTGTTATATAAAGGCTTCAG+AGG | + | chr4.2:21622251-21622270 | MS.gene39404:intron | 35.0% | |
| CTTTGCTACAACGATTTAAG+TGG | + | chr4.2:21622637-21622656 | MS.gene39404:intron | 35.0% | |
| GGCAAAATGGGATTTGTAAA+TGG | + | chr4.2:21623257-21623276 | MS.gene39404:CDS | 35.0% | |
| GTATGCAGCAATAAACCATT+AGG | + | chr4.2:21624602-21624621 | MS.gene39404:intron | 35.0% | |
| GTGGTTCTTATGATGATTGA+AGG | - | chr4.2:21621614-21621633 | None:intergenic | 35.0% | |
| TATTTAGAAGGGATTGATCG+TGG | + | chr4.2:21624812-21624831 | MS.gene39404:CDS | 35.0% | |
| TATTTATCTTGTGGGGTTGT+GGG | + | chr4.2:21623714-21623733 | MS.gene39404:intron | 35.0% | |
| TCCAGTCAAATTATGACAAG+TGG | + | chr4.2:21622092-21622111 | MS.gene39404:intron | 35.0% | |
| TGGTTTCATCATCATACAAG+AGG | + | chr4.2:21624730-21624749 | MS.gene39404:CDS | 35.0% | |
| TTAGTCACTTCAACTCAGTT+GGG | + | chr4.2:21623195-21623214 | MS.gene39404:CDS | 35.0% | |
| TTGTTCCAAGTTTCAGATGT+TGG | - | chr4.2:21623425-21623444 | None:intergenic | 35.0% | |
| TTTATGAAGTTTGCAAGGAC+TGG | + | chr4.2:21624677-21624696 | MS.gene39404:CDS | 35.0% | |
| ! | ACATCTGAAACTTGGAACAA+AGG | + | chr4.2:21623425-21623444 | MS.gene39404:CDS | 35.0% |
| ! | CTATCTGAAGCACCTTTATT+TGG | + | chr4.2:21623122-21623141 | MS.gene39404:CDS | 35.0% |
| ! | TATCTCTATTCTAGCTGAAG+AGG | + | chr4.2:21623028-21623047 | MS.gene39404:CDS | 35.0% |
| ! | TGAACCTTTAGAGAAATCCA+AGG | - | chr4.2:21624789-21624808 | None:intergenic | 35.0% |
| !! | AATTAGCCTTCTCAACTGTT+TGG | - | chr4.2:21623595-21623614 | None:intergenic | 35.0% |
| !! | GAGTTTTAATATGCGTGTCA+TGG | - | chr4.2:21624345-21624364 | None:intergenic | 35.0% |
| !! | TGTAGCTTTATCACTCATAG+AGG | + | chr4.2:21623292-21623311 | MS.gene39404:CDS | 35.0% |
| !!! | ACAGAGATACTTGTTTTGCA+TGG | - | chr4.2:21623538-21623557 | None:intergenic | 35.0% |
| !!! | GATACTTGTTTTGCATGGTT+TGG | - | chr4.2:21623533-21623552 | None:intergenic | 35.0% |
| !!! | TTTTCAAGTACCAGTCTAAG+TGG | - | chr4.2:21623982-21624001 | None:intergenic | 35.0% |
| AAAATATGGGATCATGCTGC+TGG | + | chr4.2:21624710-21624729 | MS.gene39404:CDS | 40.0% | |
| ACTTAGTGCCCAAAATCTTC+CGG | - | chr4.2:21623228-21623247 | None:intergenic | 40.0% | |
| AGATGCTGTTGATGCTAGTT+GGG | + | chr4.2:21624877-21624896 | MS.gene39404:CDS | 40.0% | |
| AGATGTTCCTAGTAGTAGCT+CGG | - | chr4.2:21622851-21622870 | None:intergenic | 40.0% | |
| AGATGTTGGAGGAATCAACT+TGG | - | chr4.2:21623411-21623430 | None:intergenic | 40.0% | |
| ATTGCAATCCTTGGATGACT+TGG | - | chr4.2:21621821-21621840 | None:intergenic | 40.0% | |
| CAGCAACATCCAATTCTTAC+AGG | - | chr4.2:21622031-21622050 | None:intergenic | 40.0% | |
| CAGTTCAGATGCATTAGTGT+TGG | - | chr4.2:21623069-21623088 | None:intergenic | 40.0% | |
| CCTCGTGCTTAAAACTCTTT+CGG | + | chr4.2:21622807-21622826 | MS.gene39404:intron | 40.0% | |
| CGGTAAACAACTTTGATAGG+TGG | - | chr4.2:21624307-21624326 | None:intergenic | 40.0% | |
| CTTACGGAAGTAAAAGCTCA+CGG | + | chr4.2:21624033-21624052 | MS.gene39404:intron | 40.0% | |
| CTTGATTTCCAAGTCATCCA+AGG | + | chr4.2:21621810-21621829 | MS.gene39404:CDS | 40.0% | |
| GACAGCAACATCCAATTCTT+GGG | - | chr4.2:21621743-21621762 | None:intergenic | 40.0% | |
| GACTGAAGAATTGCAATCCT+TGG | - | chr4.2:21621830-21621849 | None:intergenic | 40.0% | |
| GCCACTTGTCATAATTTGAC+TGG | - | chr4.2:21622096-21622115 | None:intergenic | 40.0% | |
| GCTTTATCACTCATAGAGGA+TGG | + | chr4.2:21623296-21623315 | MS.gene39404:CDS | 40.0% | |
| GGTATATGCTTCATTAACCG+AGG | + | chr4.2:21622694-21622713 | MS.gene39404:intron | 40.0% | |
| GTCTACTGTCCTGTAAGAAT+TGG | + | chr4.2:21622019-21622038 | MS.gene39404:intron | 40.0% | |
| GTTGTTTACCGCATAACCTA+CGG | + | chr4.2:21624316-21624335 | MS.gene39404:intron | 40.0% | |
| TAGATGCTGTTGATGCTAGT+TGG | + | chr4.2:21624876-21624895 | MS.gene39404:CDS | 40.0% | |
| TAGTCACTTCAACTCAGTTG+GGG | + | chr4.2:21623196-21623215 | MS.gene39404:CDS | 40.0% | |
| TATGCTTCATTAACCGAGGT+TGG | + | chr4.2:21622698-21622717 | MS.gene39404:intron | 40.0% | |
| TCAAGTCACTCCTTTACTGA+TGG | + | chr4.2:21623614-21623633 | MS.gene39404:CDS | 40.0% | |
| TCATATGAACGCTTGTGCAT+CGG | + | chr4.2:21622386-21622405 | MS.gene39404:intron | 40.0% | |
| TCCTAACTACCCTATGAGAA+AGG | + | chr4.2:21623346-21623365 | MS.gene39404:CDS | 40.0% | |
| TCCTTTCTCATAGGGTAGTT+AGG | - | chr4.2:21623350-21623369 | None:intergenic | 40.0% | |
| TGACAGCAACATCCAATTCT+TGG | - | chr4.2:21621744-21621763 | None:intergenic | 40.0% | |
| TGATATTGCGGTTCAGATTG+TGG | + | chr4.2:21623903-21623922 | MS.gene39404:intron | 40.0% | |
| TGCAATTCTCGACAGTATCA+AGG | - | chr4.2:21623839-21623858 | None:intergenic | 40.0% | |
| TGGCCACACAAACTTCTTAT+TGG | - | chr4.2:21623513-21623532 | None:intergenic | 40.0% | |
| TGTTCAATACTAATCCACCG+TGG | + | chr4.2:21624280-21624299 | MS.gene39404:intron | 40.0% | |
| TTCATCATCATACAAGAGGC+AGG | + | chr4.2:21624734-21624753 | MS.gene39404:CDS | 40.0% | |
| TTCCAAGTTTCAGATGTTGG+AGG | - | chr4.2:21623422-21623441 | None:intergenic | 40.0% | |
| TTCTGTTGACAACCTAGGAT+TGG | + | chr4.2:21623559-21623578 | MS.gene39404:CDS | 40.0% | |
| TTGCAATTCTTCAGTCACAG+TGG | + | chr4.2:21621834-21621853 | MS.gene39404:CDS | 40.0% | |
| TTTGTGCCAAACAGTTGAGA+AGG | + | chr4.2:21623586-21623605 | MS.gene39404:CDS | 40.0% | |
| ! | AAATATGTGGCACTAGCTTG+TGG | + | chr4.2:21624641-21624660 | MS.gene39404:CDS | 40.0% |
| ! | AAGTCCTCTTGATGGCAAAA+TGG | + | chr4.2:21623244-21623263 | MS.gene39404:CDS | 40.0% |
| ! | AATATGTGGCACTAGCTTGT+GGG | + | chr4.2:21624642-21624661 | MS.gene39404:CDS | 40.0% |
| ! | AATCCCATTTTGCCATCAAG+AGG | - | chr4.2:21623251-21623270 | None:intergenic | 40.0% |
| ! | AGTCCTCTTGATGGCAAAAT+GGG | + | chr4.2:21623245-21623264 | MS.gene39404:CDS | 40.0% |
| ! | CTTGGATGACTTGGAAATCA+AGG | - | chr4.2:21621812-21621831 | None:intergenic | 40.0% |
| ! | GAAGTTCCAAGAGGTGATTT+TGG | - | chr4.2:21623158-21623177 | None:intergenic | 40.0% |
| ! | GAGGTCTAGGATTTAAACCT+TGG | - | chr4.2:21622791-21622810 | None:intergenic | 40.0% |
| ! | TTCCTCCAACATCTGAAACT+TGG | + | chr4.2:21623417-21623436 | MS.gene39404:CDS | 40.0% |
| !! | TTATTGGCATGATGGATCAG+TGG | - | chr4.2:21623497-21623516 | None:intergenic | 40.0% |
| AAGAACCACTCAAGCCACAT+TGG | + | chr4.2:21621625-21621644 | MS.gene39404:CDS | 45.0% | |
| AATTCTTCAGTCACAGTGGC+AGG | + | chr4.2:21621838-21621857 | MS.gene39404:CDS | 45.0% | |
| ACATACACAGGATTCGGGAA+AGG | - | chr4.2:21622520-21622539 | None:intergenic | 45.0% | |
| ACTACCCTATGAGAAAGGAC+TGG | + | chr4.2:21623351-21623370 | MS.gene39404:CDS | 45.0% | |
| ACTCATAGAGGATGGAGAAG+TGG | + | chr4.2:21623304-21623323 | MS.gene39404:CDS | 45.0% | |
| AGGCACAGTAACAGATGCTA+GGG | + | chr4.2:21624757-21624776 | MS.gene39404:CDS | 45.0% | |
| ATCAAGGATCGTAAGGCAAC+TGG | - | chr4.2:21623823-21623842 | None:intergenic | 45.0% | |
| ATCACCTCTTGGAACTTCAG+AGG | + | chr4.2:21623160-21623179 | MS.gene39404:CDS | 45.0% | |
| ATCATCATACAAGAGGCAGG+AGG | + | chr4.2:21624737-21624756 | MS.gene39404:CDS | 45.0% | |
| ATGAGCCAGTCCATCAGTAA+AGG | - | chr4.2:21623627-21623646 | None:intergenic | 45.0% | |
| ATGCCATCTTCTCAGTCGTA+TGG | + | chr4.2:21624191-21624210 | MS.gene39404:intron | 45.0% | |
| CAAAACCAATGTGGCTTGAG+TGG | - | chr4.2:21621633-21621652 | None:intergenic | 45.0% | |
| CAACTTTGATAGGTGGTCCA+CGG | - | chr4.2:21624300-21624319 | None:intergenic | 45.0% | |
| CAAGCCAGTCCTTTCTCATA+GGG | - | chr4.2:21623358-21623377 | None:intergenic | 45.0% | |
| CATACACAGGATTCGGGAAA+GGG | - | chr4.2:21622519-21622538 | None:intergenic | 45.0% | |
| CGACAGTATCAAGGATCGTA+AGG | - | chr4.2:21623830-21623849 | None:intergenic | 45.0% | |
| CTATTCTTCTCCCTTGATGG+AGG | + | chr4.2:21621672-21621691 | MS.gene39404:CDS | 45.0% | |
| CTCAACTGTTTGGCACAAAG+TGG | - | chr4.2:21623585-21623604 | None:intergenic | 45.0% | |
| CTGCAAGCTTCTACTTCCAA+AGG | + | chr4.2:21624224-21624243 | MS.gene39404:intron | 45.0% | |
| CTGTCTCAACCATGAAAACG+TGG | - | chr4.2:21624063-21624082 | None:intergenic | 45.0% | |
| CTGTCTTCTGTTGACAACCT+AGG | + | chr4.2:21623554-21623573 | MS.gene39404:CDS | 45.0% | |
| CTTCCACATACACAGGATTC+GGG | - | chr4.2:21622525-21622544 | None:intergenic | 45.0% | |
| GACTGGATACCAAAGCAACT+TGG | - | chr4.2:21622079-21622098 | None:intergenic | 45.0% | |
| GCCTACAAAAAGACCAACCT+CGG | - | chr4.2:21622714-21622733 | None:intergenic | 45.0% | |
| GCTTCCACATACACAGGATT+CGG | - | chr4.2:21622526-21622545 | None:intergenic | 45.0% | |
| GGTGCTTCAGCTCCAAATAA+AGG | - | chr4.2:21623137-21623156 | None:intergenic | 45.0% | |
| GTGTCAAAGCAATTGTGAGC+TGG | + | chr4.2:21622976-21622995 | MS.gene39404:CDS | 45.0% | |
| TATGCAGACAAGTTCTACGG+TGG | + | chr4.2:21623955-21623974 | MS.gene39404:intron | 45.0% | |
| TCTCAACCATGAAAACGTGG+AGG | - | chr4.2:21624060-21624079 | None:intergenic | 45.0% | |
| TGGTATGTTTGCACGGATGA+TGG | - | chr4.2:21621512-21621531 | None:intergenic | 45.0% | |
| TTTCCCGAATCCTGTGTATG+TGG | + | chr4.2:21622519-21622538 | MS.gene39404:intron | 45.0% | |
| ! | AAGTGGTGGTTGGTGTTCTT+GGG | + | chr4.2:21623321-21623340 | MS.gene39404:CDS | 45.0% |
| ! | ATATGTGGCACTAGCTTGTG+GGG | + | chr4.2:21624643-21624662 | MS.gene39404:CDS | 45.0% |
| ! | CAATGATTTGCGACGACCTT+TGG | - | chr4.2:21624243-21624262 | None:intergenic | 45.0% |
| ! | CTCTATTCTAGCTGAAGAGG+AGG | + | chr4.2:21623031-21623050 | MS.gene39404:CDS | 45.0% |
| ! | GAAGCACCAAAATCACCTCT+TGG | + | chr4.2:21623149-21623168 | MS.gene39404:CDS | 45.0% |
| ! | GCTTCTCGTACCGATCAATA+TGG | - | chr4.2:21622344-21622363 | None:intergenic | 45.0% |
| ! | GGTTCCTTCCGGAAGATTTT+GGG | + | chr4.2:21623217-21623236 | MS.gene39404:CDS | 45.0% |
| ! | TCACTCCTTTACTGATGGAC+TGG | + | chr4.2:21623619-21623638 | MS.gene39404:CDS | 45.0% |
| ! | TGCTAAGAAGGATAGTGGCA+AGG | + | chr4.2:21623460-21623479 | MS.gene39404:CDS | 45.0% |
| !! | AGAACCTCTGAAGTTCCAAG+AGG | - | chr4.2:21623167-21623186 | None:intergenic | 45.0% |
| !! | TGGCTCATAGTGTTGGTTTC+AGG | + | chr4.2:21623639-21623658 | MS.gene39404:CDS | 45.0% |
| !!! | ACCGAGGTTGGTCTTTTTGT+AGG | + | chr4.2:21622710-21622729 | MS.gene39404:intron | 45.0% |
| !!! | CCGAAAGAGTTTTAAGCACG+AGG | - | chr4.2:21622810-21622829 | None:intergenic | 45.0% |
| !!! | GAGTTTTAAGCACGAGGTCT+AGG | - | chr4.2:21622804-21622823 | None:intergenic | 45.0% |
| AAAGTCGCGGGTTTAAGTCC+TGG | + | chr4.2:21622433-21622452 | MS.gene39404:intron | 50.0% | |
| AACTCAGTTGGGGTTCCTTC+CGG | + | chr4.2:21623206-21623225 | MS.gene39404:CDS | 50.0% | |
| AGTCTCTGCGACCACGATTA+AGG | - | chr4.2:21623873-21623892 | None:intergenic | 50.0% | |
| AGTGCCCAAAATCTTCCGGA+AGG | - | chr4.2:21623224-21623243 | None:intergenic | 50.0% | |
| CATAGAGGATGGAGAAGTGG+TGG | + | chr4.2:21623307-21623326 | MS.gene39404:CDS | 50.0% | |
| CATGGTAGCCGTAGGTTATG+CGG | - | chr4.2:21624327-21624346 | None:intergenic | 50.0% | |
| CCAAAGCAACTTGGCACAAG+TGG | - | chr4.2:21622070-21622089 | None:intergenic | 50.0% | |
| CCAAGCCAGTCCTTTCTCAT+AGG | - | chr4.2:21623359-21623378 | None:intergenic | 50.0% | |
| CCACTTGTGCCAAGTTGCTT+TGG | + | chr4.2:21622067-21622086 | MS.gene39404:intron | 50.0% | |
| CGTCCATACGACTGAGAAGA+TGG | - | chr4.2:21624197-21624216 | None:intergenic | 50.0% | |
| CGTGGTATAGTTGCTTGTGC+TGG | + | chr4.2:21624830-21624849 | MS.gene39404:CDS | 50.0% | |
| CTTCTCAGTCGTATGGACGA+GGG | + | chr4.2:21624198-21624217 | MS.gene39404:intron | 50.0% | |
| GACATAGAGAGCAAGCCATC+TGG | - | chr4.2:21621774-21621793 | None:intergenic | 50.0% | |
| GAGGAGGACAGACAAATGGT+TGG | + | chr4.2:21621691-21621710 | MS.gene39404:CDS | 50.0% | |
| GAGGCACAGTAACAGATGCT+AGG | + | chr4.2:21624756-21624775 | MS.gene39404:CDS | 50.0% | |
| GATGGAGGAGGACAGACAAA+TGG | + | chr4.2:21621687-21621706 | MS.gene39404:CDS | 50.0% | |
| GGCACAGTAACAGATGCTAG+GGG | + | chr4.2:21624758-21624777 | MS.gene39404:CDS | 50.0% | |
| GTTCCTAGTAGTAGCTCGGT+TGG | - | chr4.2:21622847-21622866 | None:intergenic | 50.0% | |
| TCACCAACCGAGCTACTACT+AGG | + | chr4.2:21622841-21622860 | MS.gene39404:intron | 50.0% | |
| TCCCGTGACTGAAAAAGTCG+CGG | + | chr4.2:21622420-21622439 | MS.gene39404:intron | 50.0% | |
| TCTTCTCAGTCGTATGGACG+AGG | + | chr4.2:21624197-21624216 | MS.gene39404:intron | 50.0% | |
| TGGGCACTAAGTCCTCTTGA+TGG | + | chr4.2:21623236-21623255 | MS.gene39404:CDS | 50.0% | |
| TGTCTGTCCTCCTCCATCAA+GGG | - | chr4.2:21621685-21621704 | None:intergenic | 50.0% | |
| TTCTCAGTCGTATGGACGAG+GGG | + | chr4.2:21624199-21624218 | MS.gene39404:intron | 50.0% | |
| TTCTTCTCCCTTGATGGAGG+AGG | + | chr4.2:21621675-21621694 | MS.gene39404:CDS | 50.0% | |
| TTGTCTGTCCTCCTCCATCA+AGG | - | chr4.2:21621686-21621705 | None:intergenic | 50.0% | |
| ! | AGAAGGATAGTGGCAAGGCT+TGG | + | chr4.2:21623465-21623484 | MS.gene39404:CDS | 50.0% |
| ! | GAAGTGGTGGTTGGTGTTCT+TGG | + | chr4.2:21623320-21623339 | MS.gene39404:CDS | 50.0% |
| ! | GGGAAAGGGTCCCACTATTT+TGG | - | chr4.2:21622505-21622524 | None:intergenic | 50.0% |
| ! | GGGTTCCTTCCGGAAGATTT+TGG | + | chr4.2:21623216-21623235 | MS.gene39404:CDS | 50.0% |
| !! | CCTATGAGAAAGGACTGGCT+TGG | + | chr4.2:21623356-21623375 | MS.gene39404:CDS | 50.0% |
| !! | GATGGACTGGCTCATAGTGT+TGG | + | chr4.2:21623632-21623651 | MS.gene39404:CDS | 50.0% |
| !! | TGGCATGATGGATCAGTGGT+TGG | - | chr4.2:21623493-21623512 | None:intergenic | 50.0% |
| !! | TTCGGTGCTTCCACATACAC+AGG | - | chr4.2:21622532-21622551 | None:intergenic | 50.0% |
| !!! | ACCCGCGACTTTTTCAGTCA+CGG | - | chr4.2:21622425-21622444 | None:intergenic | 50.0% |
| AGATGCTAGGGGCAGTTCCT+TGG | + | chr4.2:21624769-21624788 | MS.gene39404:CDS | 55.0% | |
| ATGCGTGTCATGGTAGCCGT+AGG | - | chr4.2:21624335-21624354 | None:intergenic | 55.0% | |
| CCCGTGACTGAAAAAGTCGC+GGG | + | chr4.2:21622421-21622440 | MS.gene39404:intron | 55.0% | |
| CTACGGTGGACCACTTAGAC+TGG | + | chr4.2:21623969-21623988 | MS.gene39404:intron | 55.0% | |
| CTTTGATAGGTGGTCCACGG+TGG | - | chr4.2:21624297-21624316 | None:intergenic | 55.0% | |
| GAGGATGGAGAAGTGGTGGT+TGG | + | chr4.2:21623311-21623330 | MS.gene39404:CDS | 55.0% | |
| GGCACAAAGTGGCCAATCCT+AGG | - | chr4.2:21623574-21623593 | None:intergenic | 55.0% | |
| TCTCAGTCGTATGGACGAGG+GGG | + | chr4.2:21624200-21624219 | MS.gene39404:intron | 55.0% | |
| TGCTGTCAGAGCAGTCCAGA+TGG | + | chr4.2:21621756-21621775 | MS.gene39404:CDS | 55.0% | |
| ! | ACTAGCTTGTGGGGATGCAG+AGG | + | chr4.2:21624652-21624671 | MS.gene39404:CDS | 55.0% |
| ! | CACGGTCCTCCACGTTTTCA+TGG | + | chr4.2:21624051-21624070 | MS.gene39404:intron | 55.0% |
| !!! | CCCGCGACTTTTTCAGTCAC+GGG | - | chr4.2:21622424-21622443 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 21621493 | 21624916 | 21621493 | ID=MS.gene39404 |
| chr4.2 | mRNA | 21621493 | 21624916 | 21621493 | ID=MS.gene39404.t1;Parent=MS.gene39404 |
| chr4.2 | exon | 21621493 | 21621859 | 21621493 | ID=MS.gene39404.t1.exon1;Parent=MS.gene39404.t1 |
| chr4.2 | CDS | 21621493 | 21621859 | 21621493 | ID=cds.MS.gene39404.t1;Parent=MS.gene39404.t1 |
| chr4.2 | exon | 21622970 | 21623660 | 21622970 | ID=MS.gene39404.t1.exon2;Parent=MS.gene39404.t1 |
| chr4.2 | CDS | 21622970 | 21623660 | 21622970 | ID=cds.MS.gene39404.t1;Parent=MS.gene39404.t1 |
| chr4.2 | exon | 21624610 | 21624916 | 21624610 | ID=MS.gene39404.t1.exon3;Parent=MS.gene39404.t1 |
| chr4.2 | CDS | 21624610 | 21624916 | 21624610 | ID=cds.MS.gene39404.t1;Parent=MS.gene39404.t1 |
| Gene Sequence |
| Protein sequence |
