AlfalfaGEDB | MS.gene060716

M. sativa cultivar XinJiangDaYe / MS.gene060716

KEGG: -
GO: -
PFAM: PF03478.21

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060716.t1	KEH41356.1	87.3	259	31	2	1	258	133	390	3.00E-130	474.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060716.t1	Q3EBZ2	34.5	235	126	8	41	251	160	390	2.0e-21	104.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060716.t1	A0A072VIF8	87.3	259	31	2	1	258	133	390	2.2e-130	474.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene052534	MS.gene060716	0.814708	1.34E-51	-1.69E-46
MS.gene05686	MS.gene060716	0.802888	4.53E-49	-1.69E-46
MS.gene060716	MS.gene066513	0.806364	8.53E-50	-1.69E-46
MS.gene060716	MS.gene067087	0.802426	5.64E-49	-1.69E-46
MS.gene060716	MS.gene06857	0.803395	3.56E-49	-1.69E-46
MS.gene060716	MS.gene072029	0.807644	4.57E-50	-1.69E-46
MS.gene060716	MS.gene072280	0.807603	4.66E-50	-1.69E-46
MS.gene060716	MS.gene072299	0.804454	2.14E-49	-1.69E-46
MS.gene060716	MS.gene08862	0.805131	1.55E-49	-1.69E-46
MS.gene060716	MS.gene09233	0.805749	1.15E-49	-1.69E-46
MS.gene060716	MS.gene20582	0.802713	4.92E-49	-1.69E-46
MS.gene060716	MS.gene25978	0.803717	3.05E-49	-1.69E-46
MS.gene060716	MS.gene29036	0.833328	5.68E-56	-1.69E-46
MS.gene060716	MS.gene29096	0.829579	4.76E-55	-1.69E-46
MS.gene060716	MS.gene29428	0.805426	1.34E-49	-1.69E-46
MS.gene060716	MS.gene30970	0.802352	5.84E-49	-1.69E-46
MS.gene060716	MS.gene31142	0.809556	1.79E-50	-1.69E-46
MS.gene060716	MS.gene32184	0.807453	5.02E-50	-1.69E-46
MS.gene060716	MS.gene32801	0.809178	2.15E-50	-1.69E-46
MS.gene060716	MS.gene33651	0.809133	2.20E-50	-1.69E-46
MS.gene060716	MS.gene34444	0.809307	2.02E-50	-1.69E-46
MS.gene060716	MS.gene35044	0.800629	1.32E-48	-1.69E-46
MS.gene060716	MS.gene35858	0.8078	4.23E-50	-1.69E-46
MS.gene060716	MS.gene36987	0.804355	2.25E-49	-1.69E-46
MS.gene060716	MS.gene38759	0.804072	2.57E-49	-1.69E-46
MS.gene060716	MS.gene39404	0.805609	1.23E-49	-1.69E-46
MS.gene060716	MS.gene40709	0.810766	9.79E-51	-1.69E-46
MS.gene060716	MS.gene41218	0.808737	2.67E-50	-1.69E-46
MS.gene060716	MS.gene41383	0.800543	1.37E-48	-1.69E-46
MS.gene060716	MS.gene43972	0.800025	1.75E-48	-1.69E-46
MS.gene060716	MS.gene54704	0.805377	1.37E-49	-1.69E-46
MS.gene060716	MS.gene58653	0.811566	6.57E-51	-1.69E-46
MS.gene060716	MS.gene62677	0.809139	2.19E-50	-1.69E-46
MS.gene060716	MS.gene68198	0.821361	4.21E-53	-1.69E-46
MS.gene060716	MS.gene71945	0.807995	3.85E-50	-1.69E-46
MS.gene060716	MS.gene73467	0.81256	3.99E-51	-1.69E-46
MS.gene060716	MS.gene74537	0.809852	1.54E-50	-1.69E-46
MS.gene060716	MS.gene74604	0.819023	1.44E-52	-1.69E-46
MS.gene060716	MS.gene75521	0.813834	2.09E-51	-1.69E-46
MS.gene060716	MS.gene76244	0.824393	8.27E-54	-1.69E-46
MS.gene060716	MS.gene80631	0.822783	1.97E-53	-1.69E-46
MS.gene060716	MS.gene81047	0.803889	2.81E-49	-1.69E-46
MS.gene060716	MS.gene87673	0.808852	2.53E-50	-1.69E-46
MS.gene060716	MS.gene91204	0.807045	6.12E-50	-1.69E-46
MS.gene060716	MS.gene92320	0.807565	4.75E-50	-1.69E-46
MS.gene060716	MS.gene92348	0.800332	1.51E-48	-1.69E-46
MS.gene060716	MS.gene94242	0.804975	1.67E-49	-1.69E-46
MS.gene060716	MS.gene98064	0.813574	2.39E-51	-1.69E-46
MS.gene060716	MS.gene99894	0.813168	2.93E-51	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060716.t1	MTR_1g049170	87.259	259	31	2	1	258	133	390	2.67e-169	473
MS.gene060716.t1	MTR_3g092000	69.683	221	64	2	38	257	186	404	9.14e-106	313
MS.gene060716.t1	MTR_3g091990	62.162	222	77	4	35	253	170	387	4.83e-92	278
MS.gene060716.t1	MTR_2g047180	51.082	231	94	9	31	253	148	367	1.17e-65	209
MS.gene060716.t1	MTR_3g030080	50.673	223	95	8	37	253	160	373	2.65e-63	202
MS.gene060716.t1	MTR_3g029650	53.394	221	95	7	43	258	150	367	2.67e-61	206
MS.gene060716.t1	MTR_3g029650	42.982	228	114	8	37	254	531	752	1.53e-41	151
MS.gene060716.t1	MTR_6g018315	49.782	229	101	8	33	251	141	365	1.81e-56	186
MS.gene060716.t1	MTR_1g016540	56.284	183	65	7	83	253	1	180	1.94e-56	179
MS.gene060716.t1	MTR_3g030480	50.459	218	89	8	39	253	154	355	4.50e-56	183
MS.gene060716.t1	MTR_3g030440	50.459	218	89	8	39	253	155	356	4.92e-56	183
MS.gene060716.t1	MTR_6g018360	49.782	229	101	8	33	251	156	380	7.67e-56	184
MS.gene060716.t1	MTR_3g030380	48.624	218	94	7	39	253	156	358	5.49e-54	178
MS.gene060716.t1	MTR_3g030050	42.629	251	105	5	39	251	171	420	9.63e-53	177
MS.gene060716.t1	MTR_3g030360	47.059	221	81	8	36	253	165	352	1.62e-52	174
MS.gene060716.t1	MTR_6g018400	47.248	218	101	6	37	251	162	368	2.11e-51	172
MS.gene060716.t1	MTR_1g016570	44.033	243	108	8	21	253	137	361	5.98e-51	171
MS.gene060716.t1	MTR_6g018390	47.465	217	101	7	37	251	160	365	1.12e-50	170
MS.gene060716.t1	MTR_3g029640	44.907	216	109	6	43	255	159	367	1.15e-50	170
MS.gene060716.t1	MTR_3g037710	41.784	213	111	2	52	251	50	262	3.79e-49	163
MS.gene060716.t1	MTR_3g029750	46.018	226	104	8	36	254	174	388	4.70e-49	166
MS.gene060716.t1	MTR_6g027100	44.206	233	111	8	25	251	156	375	1.59e-48	166
MS.gene060716.t1	MTR_3g029620	43.578	218	110	5	44	254	164	375	1.73e-48	164
MS.gene060716.t1	MTR_1g026850	43.946	223	114	7	37	252	146	364	5.13e-48	163
MS.gene060716.t1	MTR_6g027040	44.206	233	111	8	25	251	156	375	6.65e-48	163
MS.gene060716.t1	MTR_3g029670	45.575	226	105	8	36	254	174	388	1.24e-47	162
MS.gene060716.t1	MTR_1g007260	44.796	221	107	9	33	247	172	383	7.12e-47	160
MS.gene060716.t1	MTR_3g030355	44.690	226	109	7	41	254	175	396	8.91e-47	160
MS.gene060716.t1	MTR_3g030560	41.964	224	115	6	40	257	164	378	1.98e-45	156
MS.gene060716.t1	MTR_3g029920	42.259	239	111	13	32	257	160	384	7.38e-43	150
MS.gene060716.t1	MTR_3g058460	42.308	208	108	5	55	251	169	375	9.44e-43	149
MS.gene060716.t1	MTR_3g029900	44.811	212	99	6	41	251	263	457	2.88e-42	150
MS.gene060716.t1	MTR_3g029800	40.271	221	113	5	41	255	152	359	3.43e-42	147
MS.gene060716.t1	MTR_3g047980	40.351	228	102	8	30	251	160	359	4.15e-41	145
MS.gene060716.t1	MTR_3g029840	44.393	214	98	7	41	253	163	356	4.06e-39	139
MS.gene060716.t1	MTR_3g029820	45.856	181	75	9	87	257	165	332	8.99e-39	138
MS.gene060716.t1	MTR_1g007250	49.701	167	72	7	83	244	1	160	1.32e-38	132
MS.gene060716.t1	MTR_5g078450	53.237	139	42	4	117	253	2	119	3.94e-37	127
MS.gene060716.t1	MTR_3g029950	43.556	225	96	9	41	253	163	368	2.17e-36	132
MS.gene060716.t1	MTR_5g042230	46.328	177	89	5	69	240	13	188	2.86e-36	128
MS.gene060716.t1	MTR_4g022880	48.872	133	62	3	125	251	39	171	1.29e-33	120
MS.gene060716.t1	MTR_6g018370	39.891	183	102	5	17	192	78	259	1.51e-32	120
MS.gene060716.t1	MTR_8g035995	67.391	92	28	2	93	183	2	92	6.56e-32	115
MS.gene060716.t1	MTR_1g007220	38.462	195	87	6	53	244	3	167	9.90e-31	112
MS.gene060716.t1	MTR_7g005990	39.151	212	97	6	51	254	172	359	2.82e-30	116
MS.gene060716.t1	MTR_3g029870	45.294	170	65	7	96	253	182	335	6.95e-27	106
MS.gene060716.t1	MTR_1g007200	45.192	104	43	6	138	237	1	94	2.02e-15	71.2
MS.gene060716.t1	MTR_3g029850	39.744	78	44	2	174	251	42	116	3.13e-13	65.1
MS.gene060716.t1	MTR_8g074610	28.079	203	121	8	63	251	204	395	6.07e-12	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060716.t1	AT2G17030	34.599	237	127	9	39	251	158	390	1.87e-25	103
MS.gene060716.t1	AT2G17036	31.250	240	136	11	33	251	152	383	1.71e-20	90.1
MS.gene060716.t1	AT2G17036	31.250	240	136	11	33	251	153	384	1.72e-20	90.1
MS.gene060716.t1	AT5G60060	26.549	226	138	9	33	241	158	372	7.15e-12	65.1
MS.gene060716.t1	AT5G24040	22.897	214	154	7	47	252	75	285	2.59e-11	62.8
MS.gene060716.t1	AT5G24040	22.897	214	154	7	47	252	160	370	7.47e-11	62.0

Find 52 sgRNAs with CRISPR-Local

Find 70 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCTATGACTCTCATTGTTT+TGG	0.157074	1.3:-31655065	MS.gene060716:CDS
CGTCAGGATCCGACACCTTT+AGG	0.286759	1.3:-31655407	MS.gene060716:CDS
CTGACTACTTCAACTTCTTC+TGG	0.327644	1.3:-31654779	MS.gene060716:CDS
GTCAGGATCCGACACCTTTA+GGG	0.352646	1.3:-31655406	MS.gene060716:CDS
ACAATACTGGATGACCGTTT+TGG	0.352729	1.3:+31655306	None:intergenic
GTCGAAGAGCTTAAGGGATA+AGG	0.404239	1.3:-31654976	MS.gene060716:CDS
TCGCTGCAGTGAAACAATAC+TGG	0.407261	1.3:+31655293	None:intergenic
AATGGAAGTCGAAGAGCTTA+AGG	0.422589	1.3:-31654983	MS.gene060716:CDS
ATTGGTCGGACAGTTGCGTT+TGG	0.424683	1.3:-31655185	MS.gene060716:CDS
CCACATCGCATGTTATCAAA+AGG	0.430095	1.3:+31654855	None:intergenic
CAGAAGAAGTTGAAGTAGTC+AGG	0.435981	1.3:+31654780	None:intergenic
TCGGACAGTTGCGTTTGGAT+TGG	0.449462	1.3:-31655180	MS.gene060716:CDS
GGACTATAGTGTCGAGTTAG+TGG	0.460930	1.3:-31655159	MS.gene060716:CDS
CAACTTCTTCTGGCCACCTC+CGG	0.471703	1.3:-31654769	MS.gene060716:CDS
TAAGCTTAATGAGAAGAAGA+AGG	0.474353	1.3:-31655006	MS.gene060716:CDS
TCAGTTGAAGGTACAGCGTC+AGG	0.478522	1.3:-31655423	MS.gene060716:CDS
TTTCCCATGCCATACCCTAA+AGG	0.485274	1.3:+31655392	None:intergenic
GTTTGAACTCTATCAGTTGA+AGG	0.490865	1.3:-31655435	MS.gene060716:CDS
TTAATGAGAAGAAGAAGGAA+TGG	0.498438	1.3:-31655001	MS.gene060716:CDS
ATGGAAGTCGAAGAGCTTAA+GGG	0.506592	1.3:-31654982	MS.gene060716:CDS
TTCACTGCAGCGAAGAGCGT+TGG	0.509094	1.3:-31655283	MS.gene060716:CDS
TCGAGAATCCACTCCGGAGG+TGG	0.511300	1.3:+31654756	None:intergenic
AAAGACGACACAATTCCCTT+TGG	0.513520	1.3:+31654896	None:intergenic
TTTGGGTTCCCTGTCAAAGA+GGG	0.520426	1.3:-31655047	MS.gene060716:CDS
CAGATTTGTCTATTGCCAAA+GGG	0.522486	1.3:-31654911	MS.gene060716:CDS
AGAAAGTACGTTGACATGCA+TGG	0.524824	1.3:+31655251	None:intergenic
AGTCAGGATAATCAGACAAA+GGG	0.533962	1.3:+31654796	None:intergenic
TCAGATTTGTCTATTGCCAA+AGG	0.535639	1.3:-31654912	MS.gene060716:CDS
GATCCGACACCTTTAGGGTA+TGG	0.541589	1.3:-31655401	MS.gene060716:CDS
CTCGGGACATTGAACCAAAA+CGG	0.542934	1.3:-31655320	MS.gene060716:CDS
ACTCACCTTCACACTCTACA+AGG	0.545195	1.3:+31655105	None:intergenic
CACATCGCATGTTATCAAAA+GGG	0.547013	1.3:+31654856	None:intergenic
GAAAGTACGTTGACATGCAT+GGG	0.547996	1.3:+31655252	None:intergenic
AATCAGACAAAGGGATAAGC+CGG	0.556570	1.3:+31654805	None:intergenic
ATGCAGTTAATAAAATTGGT+CGG	0.557335	1.3:-31655199	MS.gene060716:CDS
CAAAGAGGGTCTAAAACTGA+AGG	0.576112	1.3:-31655033	MS.gene060716:CDS
TCTTCTGGCCACCTCCGGAG+TGG	0.587712	1.3:-31654764	MS.gene060716:CDS
ATGCCATACCCTAAAGGTGT+CGG	0.595533	1.3:+31655398	None:intergenic
AGGTGAGTTGTTGCTAGTAG+TGG	0.596067	1.3:-31655090	MS.gene060716:CDS
ATATCTGTGCGTTTAAAGAG+CGG	0.602087	1.3:-31655226	MS.gene060716:CDS
TAGTCAGGATAATCAGACAA+AGG	0.606271	1.3:+31654795	None:intergenic
TTAGTGGCTGAACATGTGAA+TGG	0.607438	1.3:-31655143	MS.gene060716:CDS
GACACCTTTAGGGTATGGCA+TGG	0.609897	1.3:-31655396	MS.gene060716:CDS
TGGCTGAACATGTGAATGGA+GGG	0.622410	1.3:-31655139	MS.gene060716:CDS
ACACCTTTAGGGTATGGCAT+GGG	0.643517	1.3:-31655395	MS.gene060716:CDS
GTGGCTGAACATGTGAATGG+AGG	0.661757	1.3:-31655140	MS.gene060716:CDS
ATTTCGAGAATCCACTCCGG+AGG	0.662099	1.3:+31654753	None:intergenic
AAATTCCTTGTAGAGTGTGA+AGG	0.674175	1.3:-31655110	MS.gene060716:CDS
TGCATTTCGAGAATCCACTC+CGG	0.678133	1.3:+31654750	None:intergenic
GGCTGAACATGTGAATGGAG+GGG	0.690996	1.3:-31655138	MS.gene060716:CDS
TAGTTGCTATTATGCAACGT+GGG	0.698080	1.3:-31655364	MS.gene060716:CDS
GTAGTTGCTATTATGCAACG+TGG	0.761838	1.3:-31655365	MS.gene060716:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTATGCAGTTAATAAAAT+TGG	-	chr1.3:31655025-31655044	MS.gene060716:CDS	15.0%
!	ATGCAGTTAATAAAATTGGT+CGG	-	chr1.3:31655029-31655048	MS.gene060716:CDS	25.0%
	AACAAAAAAACTGTTGCTCT+CGG	-	chr1.3:31654890-31654909	MS.gene060716:CDS	30.0%
	TAAGCTTAATGAGAAGAAGA+AGG	-	chr1.3:31655222-31655241	MS.gene060716:CDS	30.0%
	TTAATGAGAAGAAGAAGGAA+TGG	-	chr1.3:31655227-31655246	MS.gene060716:CDS	30.0%
!	ATCTATGACTCTCATTGTTT+TGG	-	chr1.3:31655163-31655182	MS.gene060716:CDS	30.0%
!	TCTATGACTCTCATTGTTTT+GGG	-	chr1.3:31655164-31655183	MS.gene060716:CDS	30.0%
!!!	AAGATCAGACCGTTTTAAAA+CGG	-	chr1.3:31654753-31654772	MS.gene060716:CDS	30.0%
!!!	TTCCTTAGACCGTTTTAAAA+CGG	+	chr1.3:31654765-31654784	None:intergenic	30.0%
	AAATTCCTTGTAGAGTGTGA+AGG	-	chr1.3:31655118-31655137	MS.gene060716:CDS	35.0%
	ACAAAAAAACTGTTGCTCTC+GGG	-	chr1.3:31654891-31654910	MS.gene060716:CDS	35.0%
	AGTCAGGATAATCAGACAAA+GGG	+	chr1.3:31655435-31655454	None:intergenic	35.0%
	ATATCTGTGCGTTTAAAGAG+CGG	-	chr1.3:31655002-31655021	MS.gene060716:CDS	35.0%
	CACATCGCATGTTATCAAAA+GGG	+	chr1.3:31655375-31655394	None:intergenic	35.0%
	CAGATTTGTCTATTGCCAAA+GGG	-	chr1.3:31655317-31655336	MS.gene060716:CDS	35.0%
	GTTTGAACTCTATCAGTTGA+AGG	-	chr1.3:31654793-31654812	MS.gene060716:CDS	35.0%
	TAGTCAGGATAATCAGACAA+AGG	+	chr1.3:31655436-31655455	None:intergenic	35.0%
	TCAGATTTGTCTATTGCCAA+AGG	-	chr1.3:31655316-31655335	MS.gene060716:CDS	35.0%
!	TAGTTGCTATTATGCAACGT+GGG	-	chr1.3:31654864-31654883	MS.gene060716:CDS	35.0%
!	TGGGATGTGTGTTTTTCATT+TGG	-	chr1.3:31655393-31655412	MS.gene060716:CDS	35.0%
!	TTTTTCATTTGGACGAACAC+CGG	-	chr1.3:31655404-31655423	MS.gene060716:CDS	35.0%
!!	CTTTTGATAACATGCGATGT+GGG	-	chr1.3:31655374-31655393	MS.gene060716:CDS	35.0%
!!!	AAGGGATAAGGTTTTGTTCT+TGG	-	chr1.3:31655264-31655283	MS.gene060716:CDS	35.0%
!!!	AAGGTTTTGTTCTTGGGAAA+TGG	-	chr1.3:31655271-31655290	MS.gene060716:CDS	35.0%
!!!	AGGGATAAGGTTTTGTTCTT+GGG	-	chr1.3:31655265-31655284	MS.gene060716:CDS	35.0%
	AAAGACGACACAATTCCCTT+TGG	+	chr1.3:31655335-31655354	None:intergenic	40.0%
	AATCAGACAAAGGGATAAGC+CGG	+	chr1.3:31655426-31655445	None:intergenic	40.0%
	AATGGAAGTCGAAGAGCTTA+AGG	-	chr1.3:31655245-31655264	MS.gene060716:CDS	40.0%
	ATGGAAGTCGAAGAGCTTAA+GGG	-	chr1.3:31655246-31655265	MS.gene060716:CDS	40.0%
	CAGAAGAAGTTGAAGTAGTC+AGG	+	chr1.3:31655451-31655470	None:intergenic	40.0%
	CCACATCGCATGTTATCAAA+AGG	+	chr1.3:31655376-31655395	None:intergenic	40.0%
	CTGACTACTTCAACTTCTTC+TGG	-	chr1.3:31655449-31655468	MS.gene060716:CDS	40.0%
	TTAGTGGCTGAACATGTGAA+TGG	-	chr1.3:31655085-31655104	MS.gene060716:CDS	40.0%
!	ACAATACTGGATGACCGTTT+TGG	+	chr1.3:31654925-31654944	None:intergenic	40.0%
!	AGAAAGTACGTTGACATGCA+TGG	+	chr1.3:31654980-31654999	None:intergenic	40.0%
!	CAAAGAGGGTCTAAAACTGA+AGG	-	chr1.3:31655195-31655214	MS.gene060716:CDS	40.0%
!	GAAAGTACGTTGACATGCAT+GGG	+	chr1.3:31654979-31654998	None:intergenic	40.0%
!	GTAGTTGCTATTATGCAACG+TGG	-	chr1.3:31654863-31654882	MS.gene060716:CDS	40.0%
!!	CCTTTTGATAACATGCGATG+TGG	-	chr1.3:31655373-31655392	MS.gene060716:CDS	40.0%
!!	GTTTTAGACCCTCTTTGACA+GGG	+	chr1.3:31655192-31655211	None:intergenic	40.0%
!!!	AGTTTTAGACCCTCTTTGAC+AGG	+	chr1.3:31655193-31655212	None:intergenic	40.0%
!!!	GACCGTTTTAAAACGGTCTA+AGG	-	chr1.3:31654760-31654779	MS.gene060716:CDS	40.0%
	ACTCACCTTCACACTCTACA+AGG	+	chr1.3:31655126-31655145	None:intergenic	45.0%
	AGGGTATGGCATGGGAAAAA+AGG	-	chr1.3:31654841-31654860	MS.gene060716:CDS	45.0%
	AGGTGAGTTGTTGCTAGTAG+TGG	-	chr1.3:31655138-31655157	MS.gene060716:CDS	45.0%
	CTCGGGACATTGAACCAAAA+CGG	-	chr1.3:31654908-31654927	MS.gene060716:CDS	45.0%
	GTCGAAGAGCTTAAGGGATA+AGG	-	chr1.3:31655252-31655271	MS.gene060716:CDS	45.0%
	TCGCTGCAGTGAAACAATAC+TGG	+	chr1.3:31654938-31654957	None:intergenic	45.0%
	TGCATTTCGAGAATCCACTC+CGG	+	chr1.3:31655481-31655500	None:intergenic	45.0%
	TGGCTGAACATGTGAATGGA+GGG	-	chr1.3:31655089-31655108	MS.gene060716:CDS	45.0%
	TTTCCCATGCCATACCCTAA+AGG	+	chr1.3:31654839-31654858	None:intergenic	45.0%
!	ATGCCATACCCTAAAGGTGT+CGG	+	chr1.3:31654833-31654852	None:intergenic	45.0%
!	GGACTATAGTGTCGAGTTAG+TGG	-	chr1.3:31655069-31655088	MS.gene060716:CDS	45.0%
!	TTTGGGTTCCCTGTCAAAGA+GGG	-	chr1.3:31655181-31655200	MS.gene060716:CDS	45.0%
!!	ACACCTTTAGGGTATGGCAT+GGG	-	chr1.3:31654833-31654852	MS.gene060716:CDS	45.0%
!!!	TTTTGGGTTCCCTGTCAAAG+AGG	-	chr1.3:31655180-31655199	MS.gene060716:CDS	45.0%
	ATTGGTCGGACAGTTGCGTT+TGG	-	chr1.3:31655043-31655062	MS.gene060716:CDS	50.0%
	ATTTCGAGAATCCACTCCGG+AGG	+	chr1.3:31655478-31655497	None:intergenic	50.0%
	GGCTGAACATGTGAATGGAG+GGG	-	chr1.3:31655090-31655109	MS.gene060716:CDS	50.0%
	GTCAGGATCCGACACCTTTA+GGG	-	chr1.3:31654822-31654841	MS.gene060716:CDS	50.0%
	GTGGCTGAACATGTGAATGG+AGG	-	chr1.3:31655088-31655107	MS.gene060716:CDS	50.0%
	TCGGACAGTTGCGTTTGGAT+TGG	-	chr1.3:31655048-31655067	MS.gene060716:CDS	50.0%
!	TCAGTTGAAGGTACAGCGTC+AGG	-	chr1.3:31654805-31654824	MS.gene060716:CDS	50.0%
!!	GACACCTTTAGGGTATGGCA+TGG	-	chr1.3:31654832-31654851	MS.gene060716:CDS	50.0%
!!	GATCCGACACCTTTAGGGTA+TGG	-	chr1.3:31654827-31654846	MS.gene060716:CDS	50.0%
	CAACTTCTTCTGGCCACCTC+CGG	-	chr1.3:31655459-31655478	MS.gene060716:CDS	55.0%
	CGTCAGGATCCGACACCTTT+AGG	-	chr1.3:31654821-31654840	MS.gene060716:CDS	55.0%
!	TTCACTGCAGCGAAGAGCGT+TGG	-	chr1.3:31654945-31654964	MS.gene060716:CDS	55.0%
	TCGAGAATCCACTCCGGAGG+TGG	+	chr1.3:31655475-31655494	None:intergenic	60.0%
	TCTTCTGGCCACCTCCGGAG+TGG	-	chr1.3:31655464-31655483	MS.gene060716:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	31654737	31655513	31654737	ID=MS.gene060716
chr1.3	mRNA	31654737	31655513	31654737	ID=MS.gene060716.t1;Parent=MS.gene060716
chr1.3	exon	31654737	31655513	31654737	ID=MS.gene060716.t1.exon1;Parent=MS.gene060716.t1
chr1.3	CDS	31654737	31655513	31654737	ID=cds.MS.gene060716.t1;Parent=MS.gene060716.t1

Gene Sequence

>MS.gene060716

ATGGGAAGATATAATGAAGATCAGACCGTTTTAAAACGGTCTAAGGAAGTATCGCAGTTTGAACTCTATCAGTTGAAGGTACAGCGTCAGGATCCGACACCTTTAGGGTATGGCATGGGAAAAAAGGTAGTTGCTATTATGCAACGTGGGAAAAACAAAAAAACTGTTGCTCTCGGGACATTGAACCAAAACGGTCATCCAGTATTGTTTCACTGCAGCGAAGAGCGTTGGACGTTGATCCCATGCATGTCAACGTACTTTCTAGATATCTGTGCGTTTAAAGAGCGGTTTTATGCAGTTAATAAAATTGGTCGGACAGTTGCGTTTGGATTGGACTATAGTGTCGAGTTAGTGGCTGAACATGTGAATGGAGGGGACATGAAATTCCTTGTAGAGTGTGAAGGTGAGTTGTTGCTAGTAGTGGACATCTATGACTCTCATTGTTTTGGGTTCCCTGTCAAAGAGGGTCTAAAACTGAAGGTGTTTAAGCTTAATGAGAAGAAGAAGGAATGGAAGTCGAAGAGCTTAAGGGATAAGGTTTTGTTCTTGGGAAATGGATGTTCGTTTACTGCTTCTGCTTCAGATTTGTCTATTGCCAAAGGGAATTGTGTCGTCTTTATTGACGATGCATTCATCCCTTTTGATAACATGCGATGTGGGATGTGTGTTTTTCATTTGGACGAACACCGGCTTATCCCTTTGTCTGATTATCCTGACTACTTCAACTTCTTCTGGCCACCTCCGGAGTGGATTCTCGAAATGCAATACCATTCATAA

Protein sequence

>MS.gene060716.t1

MGRYNEDQTVLKRSKEVSQFELYQLKVQRQDPTPLGYGMGKKVVAIMQRGKNKKTVALGTLNQNGHPVLFHCSEERWTLIPCMSTYFLDICAFKERFYAVNKIGRTVAFGLDYSVELVAEHVNGGDMKFLVECEGELLLVVDIYDSHCFGFPVKEGLKLKVFKLNEKKKEWKSKSLRDKVLFLGNGCSFTASASDLSIAKGNCVVFIDDAFIPFDNMRCGMCVFHLDEHRLIPLSDYPDYFNFFWPPPEWILEMQYHS