Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39955.t1 | XP_003590603.2 | 98.3 | 120 | 2 | 0 | 36 | 155 | 46 | 165 | 2.00E-57 | 231.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39955.t1 | G7IDL8 | 98.3 | 120 | 2 | 0 | 36 | 155 | 46 | 165 | 1.5e-57 | 231.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049669 | MS.gene39955 | 0.804659 | 1.94E-49 | -1.69E-46 |
| MS.gene049873 | MS.gene39955 | 0.815047 | 1.13E-51 | -1.69E-46 |
| MS.gene050303 | MS.gene39955 | 0.810453 | 1.14E-50 | -1.69E-46 |
| MS.gene050355 | MS.gene39955 | 0.854668 | 1.06E-61 | -1.69E-46 |
| MS.gene050605 | MS.gene39955 | 0.808058 | 3.73E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene39955 | 0.827506 | 1.51E-54 | -1.69E-46 |
| MS.gene050953 | MS.gene39955 | 0.823162 | 1.61E-53 | -1.69E-46 |
| MS.gene052333 | MS.gene39955 | 0.809488 | 1.85E-50 | -1.69E-46 |
| MS.gene052358 | MS.gene39955 | -0.802736 | 4.87E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene39955 | 0.801858 | 7.38E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene39955 | 0.829783 | 4.24E-55 | -1.69E-46 |
| MS.gene052582 | MS.gene39955 | 0.807079 | 6.02E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene39955 | 0.804188 | 2.44E-49 | -1.69E-46 |
| MS.gene052586 | MS.gene39955 | 0.803848 | 2.87E-49 | -1.69E-46 |
| MS.gene053006 | MS.gene39955 | 0.809297 | 2.03E-50 | -1.69E-46 |
| MS.gene054405 | MS.gene39955 | 0.816751 | 4.71E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene39955 | 0.808923 | 2.44E-50 | -1.69E-46 |
| MS.gene054657 | MS.gene39955 | 0.816207 | 6.23E-52 | -1.69E-46 |
| MS.gene056162 | MS.gene39955 | 0.800548 | 1.37E-48 | -1.69E-46 |
| MS.gene056506 | MS.gene39955 | 0.840036 | 1.11E-57 | -1.69E-46 |
| MS.gene05659 | MS.gene39955 | 0.80306 | 4.17E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene39955 | 0.827312 | 1.68E-54 | -1.69E-46 |
| MS.gene057027 | MS.gene39955 | 0.802941 | 4.42E-49 | -1.69E-46 |
| MS.gene057079 | MS.gene39955 | 0.809853 | 1.54E-50 | -1.69E-46 |
| MS.gene05795 | MS.gene39955 | 0.808308 | 3.30E-50 | -1.69E-46 |
| MS.gene058037 | MS.gene39955 | 0.820493 | 6.66E-53 | -1.69E-46 |
| MS.gene058498 | MS.gene39955 | 0.805906 | 1.06E-49 | -1.69E-46 |
| MS.gene058548 | MS.gene39955 | 0.818612 | 1.79E-52 | -1.69E-46 |
| MS.gene058549 | MS.gene39955 | 0.835817 | 1.35E-56 | -1.69E-46 |
| MS.gene058979 | MS.gene39955 | 0.80807 | 3.71E-50 | -1.69E-46 |
| MS.gene059249 | MS.gene39955 | 0.811852 | 5.69E-51 | -1.69E-46 |
| MS.gene059317 | MS.gene39955 | 0.81902 | 1.45E-52 | -1.69E-46 |
| MS.gene05954 | MS.gene39955 | 0.848217 | 7.06E-60 | -1.69E-46 |
| MS.gene059569 | MS.gene39955 | 0.817826 | 2.70E-52 | -1.69E-46 |
| MS.gene05979 | MS.gene39955 | 0.838211 | 3.29E-57 | -1.69E-46 |
| MS.gene059830 | MS.gene39955 | 0.811959 | 5.39E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene39955 | 0.841206 | 5.47E-58 | -1.69E-46 |
| MS.gene060572 | MS.gene39955 | 0.853408 | 2.44E-61 | -1.69E-46 |
| MS.gene060586 | MS.gene39955 | 0.834099 | 3.65E-56 | -1.69E-46 |
| MS.gene060879 | MS.gene39955 | 0.817195 | 3.74E-52 | -1.69E-46 |
| MS.gene061040 | MS.gene39955 | -0.828687 | 7.83E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39955.t1 | MTR_1g071630 | 91.304 | 161 | 8 | 1 | 1 | 155 | 5 | 165 | 9.86e-84 | 243 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39955.t1 | AT4G04614 | 56.589 | 129 | 51 | 3 | 28 | 155 | 52 | 176 | 1.16e-41 | 137 |
| MS.gene39955.t1 | AT4G04614 | 56.589 | 129 | 51 | 3 | 28 | 155 | 52 | 176 | 1.16e-41 | 137 |
Find 35 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTTGTGTCATCTTCTT+TGG | 0.118453 | 1.4:+58582706 | None:intergenic |
| TTCTTTGTGTCATCTTCTTT+GGG | 0.233840 | 1.4:+58582707 | None:intergenic |
| AGGGACAATGGAGTTTATTC+TGG | 0.281268 | 1.4:-58582452 | MS.gene39955:CDS |
| CTGAAGCGATACGGCTATAA+AGG | 0.293708 | 1.4:-58582758 | MS.gene39955:CDS |
| TAAATCTACAAAGCAGAAAA+AGG | 0.315518 | 1.4:-58582801 | MS.gene39955:CDS |
| AGGCGGACCTTCAGTCTTAA+AGG | 0.331123 | 1.4:-58582738 | MS.gene39955:CDS |
| TCTGAAAATGATAGTGAAAC+TGG | 0.358513 | 1.4:-58583902 | MS.gene39955:CDS |
| CTCAGAAGGAAAAGAAGAAA+AGG | 0.400791 | 1.4:-58582532 | MS.gene39955:CDS |
| GGGATCTTGGTCAAGCAAGC+AGG | 0.419342 | 1.4:-58582511 | MS.gene39955:CDS |
| GAAAAGAAGAAAAGGGATCT+TGG | 0.429119 | 1.4:-58582524 | MS.gene39955:CDS |
| TTCAGAGCTTCAAAGTCAAT+TGG | 0.442566 | 1.4:+58582776 | None:intergenic |
| AAGATGACACAAAGAAAGAT+TGG | 0.453949 | 1.4:-58582700 | MS.gene39955:CDS |
| GTGTCATCTTCTTTGGGTGG+AGG | 0.460313 | 1.4:+58582713 | None:intergenic |
| CAGTTGGCATTTGCTCTCCT+AGG | 0.493250 | 1.4:+58582591 | None:intergenic |
| ATTATGTTGAAGAAGAGAAA+AGG | 0.499802 | 1.4:-58582481 | MS.gene39955:CDS |
| GGATCTTGGTCAAGCAAGCA+GGG | 0.515240 | 1.4:-58582510 | MS.gene39955:CDS |
| TTTGTGTCATCTTCTTTGGG+TGG | 0.516808 | 1.4:+58582710 | None:intergenic |
| TCAGAAGGAAAAGAAGAAAA+GGG | 0.533332 | 1.4:-58582531 | MS.gene39955:CDS |
| AGAAGAGAAAAGGCTGTTGA+GGG | 0.535745 | 1.4:-58582471 | MS.gene39955:CDS |
| TCATTCCTAGTCAGAACAGT+TGG | 0.556209 | 1.4:+58582575 | None:intergenic |
| ACACAAAGAAAGATTGGTCC+TGG | 0.556354 | 1.4:-58582694 | MS.gene39955:CDS |
| ACAAGAGAGGCTCTTTCCCT+AGG | 0.557271 | 1.4:-58582608 | MS.gene39955:CDS |
| AAAAGGCTGTTGAGGGACAA+TGG | 0.563867 | 1.4:-58582464 | MS.gene39955:CDS |
| TTTGAAGCTCTGAAGCGATA+CGG | 0.565621 | 1.4:-58582767 | MS.gene39955:CDS |
| TTGGTCCTGGTCCAGTGGAA+AGG | 0.567873 | 1.4:-58582681 | MS.gene39955:CDS |
| AGTTGGCATTTGCTCTCCTA+GGG | 0.578927 | 1.4:+58582592 | None:intergenic |
| AAGAAGAGAAAAGGCTGTTG+AGG | 0.580825 | 1.4:-58582472 | MS.gene39955:CDS |
| AAAGATTGGTCCTGGTCCAG+TGG | 0.594354 | 1.4:-58582686 | MS.gene39955:CDS |
| GGAGGTACCTTTAAGACTGA+AGG | 0.597747 | 1.4:+58582731 | None:intergenic |
| AAATGCCAACTGTTCTGACT+AGG | 0.603014 | 1.4:-58582580 | MS.gene39955:CDS |
| CTATGAAGAGGACAATGCCA+TGG | 0.617111 | 1.4:-58583958 | None:intergenic |
| ATCTTGGTCAAGCAAGCAGG+GGG | 0.627378 | 1.4:-58582508 | MS.gene39955:CDS |
| GATCTTGGTCAAGCAAGCAG+GGG | 0.638659 | 1.4:-58582509 | MS.gene39955:CDS |
| AGAGAGAAAGAAAACAAGAG+AGG | 0.657420 | 1.4:-58582621 | MS.gene39955:CDS |
| AAGCGATACGGCTATAAAGG+CGG | 0.718806 | 1.4:-58582755 | MS.gene39955:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGTAAATTAGAATATCG+GGG | - | chr1.4:58583341-58583360 | MS.gene39955:intron | 20.0% |
| !! | AAGAACTATTATAGCATTAT+CGG | + | chr1.4:58583254-58583273 | None:intergenic | 20.0% |
| !! | AGACAATAATATATTGCTAA+CGG | + | chr1.4:58583378-58583397 | None:intergenic | 20.0% |
| !! | ATAATCACATTAAGAAAGAA+CGG | + | chr1.4:58582833-58582852 | None:intergenic | 20.0% |
| !! | ATATAATTCAACGTAGTTAT+AGG | + | chr1.4:58582543-58582562 | None:intergenic | 20.0% |
| !! | ATATTCTAATTTACATTTCC+TGG | + | chr1.4:58583339-58583358 | None:intergenic | 20.0% |
| !! | GAAATCTAATGTGATAAATT+AGG | - | chr1.4:58582986-58583005 | MS.gene39955:intron | 20.0% |
| !! | GAAATGTAAATTAGAATATC+GGG | - | chr1.4:58583340-58583359 | MS.gene39955:intron | 20.0% |
| !! | GGAAATGTAAATTAGAATAT+CGG | - | chr1.4:58583339-58583358 | MS.gene39955:intron | 20.0% |
| !! | TGATAAGTGAAAATAGTATT+TGG | - | chr1.4:58582770-58582789 | MS.gene39955:CDS | 20.0% |
| !!! | ATTGTTTTAGATTTTGTTGT+TGG | - | chr1.4:58583136-58583155 | MS.gene39955:intron | 20.0% |
| !!! | TAAAATACCTTTGGATTTTT+TGG | + | chr1.4:58582509-58582528 | None:intergenic | 20.0% |
| !!! | TTGTTTTAGATTTTGTTGTT+GGG | - | chr1.4:58583137-58583156 | MS.gene39955:intron | 20.0% |
| ! | AAAACACAAACACTAATTGT+GGG | + | chr1.4:58582866-58582885 | None:intergenic | 25.0% |
| ! | AGTGATAGCTGATAATATTA+TGG | - | chr1.4:58583037-58583056 | MS.gene39955:intron | 25.0% |
| ! | ATTATGTTGAAGAAGAGAAA+AGG | - | chr1.4:58583902-58583921 | MS.gene39955:CDS | 25.0% |
| ! | CGTTGAATTATATGTTTAAG+TGG | - | chr1.4:58582550-58582569 | MS.gene39955:CDS | 25.0% |
| ! | GATTTATGAAACACTAACAA+CGG | - | chr1.4:58582616-58582635 | MS.gene39955:CDS | 25.0% |
| ! | TAAATCTACAAAGCAGAAAA+AGG | - | chr1.4:58583582-58583601 | MS.gene39955:intron | 25.0% |
| !! | ACAATTAGTGTTTGTGTTTT+GGG | - | chr1.4:58582866-58582885 | MS.gene39955:intron | 25.0% |
| !! | ATTATCTGAAGATCATTTTG+TGG | - | chr1.4:58582961-58582980 | MS.gene39955:intron | 25.0% |
| !!! | ACACTTTTAATCTGAAGTAT+CGG | - | chr1.4:58582733-58582752 | MS.gene39955:CDS | 25.0% |
| !!! | TGTTTTAGATTTTGTTGTTG+GGG | - | chr1.4:58583138-58583157 | MS.gene39955:intron | 25.0% |
| AAATGTACTTACTTGAACCT+AGG | - | chr1.4:58582795-58582814 | MS.gene39955:CDS | 30.0% | |
| AAGATGACACAAAGAAAGAT+TGG | - | chr1.4:58583683-58583702 | MS.gene39955:intron | 30.0% | |
| ACCAATAACAAGGAAATACA+AGG | + | chr1.4:58583105-58583124 | None:intergenic | 30.0% | |
| ACTAGTAACTAAGCAACATA+TGG | + | chr1.4:58583539-58583558 | None:intergenic | 30.0% | |
| ATCACAATACACCAATAACA+AGG | + | chr1.4:58583115-58583134 | None:intergenic | 30.0% | |
| ATGTGATAAATTAGGAGTTC+TGG | - | chr1.4:58582994-58583013 | MS.gene39955:intron | 30.0% | |
| CAAAACACAAACACTAATTG+TGG | + | chr1.4:58582867-58582886 | None:intergenic | 30.0% | |
| CAATAATATATTGCTAACGG+AGG | + | chr1.4:58583375-58583394 | None:intergenic | 30.0% | |
| GATACTTCAGATTAAAAGTG+TGG | + | chr1.4:58582734-58582753 | None:intergenic | 30.0% | |
| GCTAATTAAGTCACACAATA+TGG | + | chr1.4:58583409-58583428 | None:intergenic | 30.0% | |
| TCAGAAGGAAAAGAAGAAAA+GGG | - | chr1.4:58583852-58583871 | MS.gene39955:intron | 30.0% | |
| TTCTTTGTGTCATCTTCTTT+GGG | + | chr1.4:58583679-58583698 | None:intergenic | 30.0% | |
| TTTCTTTGTGTCATCTTCTT+TGG | + | chr1.4:58583680-58583699 | None:intergenic | 30.0% | |
| ! | AACTAGAGTAGATATTTTCC+AGG | - | chr1.4:58583318-58583337 | MS.gene39955:intron | 30.0% |
| ! | CACAATTAGTGTTTGTGTTT+TGG | - | chr1.4:58582865-58582884 | MS.gene39955:intron | 30.0% |
| ! | TCCTTGTATTTCCTTGTTAT+TGG | - | chr1.4:58583101-58583120 | MS.gene39955:intron | 30.0% |
| ! | TCTGAAAATGATAGTGAAAC+TGG | - | chr1.4:58582481-58582500 | MS.gene39955:CDS | 30.0% |
| !! | AAAATCTCATCTCTAGAATG+TGG | - | chr1.4:58582900-58582919 | MS.gene39955:intron | 30.0% |
| AAGGAATCTCTTCTACAATG+GGG | + | chr1.4:58583086-58583105 | None:intergenic | 35.0% | |
| AATCTAATCGTGTGTAGTGT+TGG | - | chr1.4:58582698-58582717 | MS.gene39955:CDS | 35.0% | |
| ACAAGGAATCTCTTCTACAA+TGG | + | chr1.4:58583088-58583107 | None:intergenic | 35.0% | |
| AGAGAGAAAGAAAACAAGAG+AGG | - | chr1.4:58583762-58583781 | MS.gene39955:intron | 35.0% | |
| AGTATGAAGCCATCATGATA+CGG | + | chr1.4:58583467-58583486 | None:intergenic | 35.0% | |
| CAAGGAATCTCTTCTACAAT+GGG | + | chr1.4:58583087-58583106 | None:intergenic | 35.0% | |
| CTCAGAAGGAAAAGAAGAAA+AGG | - | chr1.4:58583851-58583870 | MS.gene39955:intron | 35.0% | |
| GAAAAGAAGAAAAGGGATCT+TGG | - | chr1.4:58583859-58583878 | MS.gene39955:intron | 35.0% | |
| GATGCACACTAAAATACCTT+TGG | + | chr1.4:58582518-58582537 | None:intergenic | 35.0% | |
| TGACACTAACACTTTGATGT+TGG | - | chr1.4:58582648-58582667 | MS.gene39955:CDS | 35.0% | |
| TTAACTTACTTCATGTCTGC+AGG | - | chr1.4:58583559-58583578 | MS.gene39955:intron | 35.0% | |
| TTCAGAGCTTCAAAGTCAAT+TGG | + | chr1.4:58583610-58583629 | None:intergenic | 35.0% | |
| ! | ATAGCATTATCGGCTGATTT+AGG | + | chr1.4:58583244-58583263 | None:intergenic | 35.0% |
| ! | GAATCTTTCCTTTTCTCAGA+AGG | - | chr1.4:58583837-58583856 | MS.gene39955:intron | 35.0% |
| ! | TTCGAGTTTCTTGACTTTCA+AGG | - | chr1.4:58583294-58583313 | MS.gene39955:intron | 35.0% |
| !! | CTTCTTTTCCTTCTGAGAAA+AGG | + | chr1.4:58583848-58583867 | None:intergenic | 35.0% |
| !! | TTCTGAAATCCGTATCATGA+TGG | - | chr1.4:58583455-58583474 | MS.gene39955:intron | 35.0% |
| AAATGCCAACTGTTCTGACT+AGG | - | chr1.4:58583803-58583822 | MS.gene39955:intron | 40.0% | |
| AACTAAGCAACATATGGCAG+TGG | + | chr1.4:58583533-58583552 | None:intergenic | 40.0% | |
| AAGAAGAGAAAAGGCTGTTG+AGG | - | chr1.4:58583911-58583930 | MS.gene39955:CDS | 40.0% | |
| ACTAACTGAAGGTCAAGATG+GGG | + | chr1.4:58583173-58583192 | None:intergenic | 40.0% | |
| ACTGGAGCCAAAAAATCCAA+AGG | - | chr1.4:58582499-58582518 | MS.gene39955:CDS | 40.0% | |
| AGAAGAGAAAAGGCTGTTGA+GGG | - | chr1.4:58583912-58583931 | MS.gene39955:CDS | 40.0% | |
| AGATGGTTCATAGACAGTTG+TGG | - | chr1.4:58583201-58583220 | MS.gene39955:intron | 40.0% | |
| AGGGACAATGGAGTTTATTC+TGG | - | chr1.4:58583931-58583950 | MS.gene39955:CDS | 40.0% | |
| CACTAACTGAAGGTCAAGAT+GGG | + | chr1.4:58583174-58583193 | None:intergenic | 40.0% | |
| CTTGAACCTAGGATGTTGAT+AGG | - | chr1.4:58582806-58582825 | MS.gene39955:intron | 40.0% | |
| TCAGTTAGTGCAATGCAAGA+TGG | - | chr1.4:58583184-58583203 | MS.gene39955:intron | 40.0% | |
| TCATCATCATCATCACTCCA+TGG | + | chr1.4:58582445-58582464 | None:intergenic | 40.0% | |
| TCATTCCTAGTCAGAACAGT+TGG | + | chr1.4:58583811-58583830 | None:intergenic | 40.0% | |
| TCTTGCATTGCACTAACTGA+AGG | + | chr1.4:58583184-58583203 | None:intergenic | 40.0% | |
| TTCAGATAATTGCAACGCAG+AGG | + | chr1.4:58582951-58582970 | None:intergenic | 40.0% | |
| TTTGTGTCATCTTCTTTGGG+TGG | + | chr1.4:58583676-58583695 | None:intergenic | 40.0% | |
| ! | ACACAAAGAAAGATTGGTCC+TGG | - | chr1.4:58583689-58583708 | MS.gene39955:intron | 40.0% |
| !! | TTTGAAGCTCTGAAGCGATA+CGG | - | chr1.4:58583616-58583635 | MS.gene39955:intron | 40.0% |
| AAAAGGCTGTTGAGGGACAA+TGG | - | chr1.4:58583919-58583938 | MS.gene39955:CDS | 45.0% | |
| AAAGGAAAAACGCGTCGAGA+AGG | - | chr1.4:58583720-58583739 | MS.gene39955:intron | 45.0% | |
| AACGCAGAGGTTTCATACCT+TGG | + | chr1.4:58582938-58582957 | None:intergenic | 45.0% | |
| AACGGACCTATCAACATCCT+AGG | + | chr1.4:58582815-58582834 | None:intergenic | 45.0% | |
| AAGCGATACGGCTATAAAGG+CGG | - | chr1.4:58583628-58583647 | MS.gene39955:intron | 45.0% | |
| AGTTGGCATTTGCTCTCCTA+GGG | + | chr1.4:58583794-58583813 | None:intergenic | 45.0% | |
| CTGAAGCGATACGGCTATAA+AGG | - | chr1.4:58583625-58583644 | MS.gene39955:intron | 45.0% | |
| GCACTAACTGAAGGTCAAGA+TGG | + | chr1.4:58583175-58583194 | None:intergenic | 45.0% | |
| ! | TTTTTCCTTTCCACTGGACC+AGG | + | chr1.4:58583710-58583729 | None:intergenic | 45.0% |
| !! | GGAGGTACCTTTAAGACTGA+AGG | + | chr1.4:58583655-58583674 | None:intergenic | 45.0% |
| !! | TCGTGTGTAGTGTTGGTGTA+CGG | - | chr1.4:58582705-58582724 | MS.gene39955:CDS | 45.0% |
| ACAAGAGAGGCTCTTTCCCT+AGG | - | chr1.4:58583775-58583794 | MS.gene39955:intron | 50.0% | |
| AGGCGGACCTTCAGTCTTAA+AGG | - | chr1.4:58583645-58583664 | MS.gene39955:intron | 50.0% | |
| ATCTTGGTCAAGCAAGCAGG+GGG | - | chr1.4:58583875-58583894 | MS.gene39955:intron | 50.0% | |
| CAGTTGGCATTTGCTCTCCT+AGG | + | chr1.4:58583795-58583814 | None:intergenic | 50.0% | |
| GATCTTGGTCAAGCAAGCAG+GGG | - | chr1.4:58583874-58583893 | MS.gene39955:intron | 50.0% | |
| GGATCTTGGTCAAGCAAGCA+GGG | - | chr1.4:58583873-58583892 | MS.gene39955:intron | 50.0% | |
| GTGTCATCTTCTTTGGGTGG+AGG | + | chr1.4:58583673-58583692 | None:intergenic | 50.0% | |
| ! | AAAGATTGGTCCTGGTCCAG+TGG | - | chr1.4:58583697-58583716 | MS.gene39955:intron | 50.0% |
| ! | GACGCGTTTTTCCTTTCCAC+TGG | + | chr1.4:58583716-58583735 | None:intergenic | 50.0% |
| ! | TGTGGATTGACGCTCATCCA+AGG | - | chr1.4:58582918-58582937 | MS.gene39955:intron | 50.0% |
| GGGATCTTGGTCAAGCAAGC+AGG | - | chr1.4:58583872-58583891 | MS.gene39955:intron | 55.0% | |
| TTGGTCCTGGTCCAGTGGAA+AGG | - | chr1.4:58583702-58583721 | MS.gene39955:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 58582439 | 58583966 | 58582439 | ID=MS.gene39955 |
| chr1.4 | mRNA | 58582439 | 58583966 | 58582439 | ID=MS.gene39955.t1;Parent=MS.gene39955 |
| chr1.4 | exon | 58583885 | 58583966 | 58583885 | ID=MS.gene39955.t1.exon1;Parent=MS.gene39955.t1 |
| chr1.4 | CDS | 58583885 | 58583966 | 58583885 | ID=cds.MS.gene39955.t1;Parent=MS.gene39955.t1 |
| chr1.4 | exon | 58582439 | 58582824 | 58582439 | ID=MS.gene39955.t1.exon2;Parent=MS.gene39955.t1 |
| chr1.4 | CDS | 58582439 | 58582824 | 58582439 | ID=cds.MS.gene39955.t1;Parent=MS.gene39955.t1 |
| Gene Sequence |
| Protein sequence |
