Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058549.t1 | XP_013470448.1 | 99.3 | 442 | 3 | 0 | 1 | 442 | 60 | 501 | 3.00E-138 | 501.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058549.t1 | Q9ZT96 | 69.0 | 393 | 122 | 0 | 13 | 405 | 112 | 504 | 5.5e-48 | 193.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058549.t1 | A0A072VS35 | 99.3 | 442 | 3 | 0 | 1 | 442 | 60 | 501 | 2.2e-138 | 501.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene058549.t1 | TR | mTERF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050303 | MS.gene058549 | 0.825932 | 3.58E-54 | -1.69E-46 |
| MS.gene050605 | MS.gene058549 | 0.818961 | 1.49E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene058549 | -0.811266 | 7.63E-51 | -1.69E-46 |
| MS.gene050953 | MS.gene058549 | 0.800994 | 1.11E-48 | -1.69E-46 |
| MS.gene052012 | MS.gene058549 | 0.82037 | 7.11E-53 | -1.69E-46 |
| MS.gene052309 | MS.gene058549 | -0.807506 | 4.89E-50 | -1.69E-46 |
| MS.gene052954 | MS.gene058549 | 0.804624 | 1.98E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene058549 | 0.849985 | 2.27E-60 | -1.69E-46 |
| MS.gene053080 | MS.gene058549 | 0.808551 | 2.93E-50 | -1.69E-46 |
| MS.gene054657 | MS.gene058549 | 0.833639 | 4.75E-56 | -1.69E-46 |
| MS.gene05517 | MS.gene058549 | 0.821238 | 4.49E-53 | -1.69E-46 |
| MS.gene058126 | MS.gene058549 | 0.805525 | 1.28E-49 | -1.69E-46 |
| MS.gene058399 | MS.gene058549 | 0.806926 | 6.49E-50 | -1.69E-46 |
| MS.gene058548 | MS.gene058549 | 0.901241 | 3.27E-78 | -1.69E-46 |
| MS.gene058549 | MS.gene058595 | 0.823895 | 1.08E-53 | -1.69E-46 |
| MS.gene058549 | MS.gene059249 | 0.830597 | 2.69E-55 | -1.69E-46 |
| MS.gene058549 | MS.gene05954 | 0.804 | 2.66E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene05979 | 0.955421 | 3.15E-113 | -1.69E-46 |
| MS.gene058549 | MS.gene059842 | 0.806516 | 7.92E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene060322 | 0.803947 | 2.73E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene060586 | 0.805388 | 1.37E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene060802 | 0.807792 | 4.25E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene060803 | 0.830485 | 2.86E-55 | -1.69E-46 |
| MS.gene058549 | MS.gene060907 | 0.818054 | 2.39E-52 | -1.69E-46 |
| MS.gene058549 | MS.gene063128 | 0.804375 | 2.23E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene064070 | 0.807423 | 5.09E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene065711 | -0.800748 | 1.25E-48 | -1.69E-46 |
| MS.gene058549 | MS.gene06667 | 0.801017 | 1.10E-48 | -1.69E-46 |
| MS.gene058549 | MS.gene066745 | 0.803125 | 4.05E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene068529 | 0.80026 | 1.57E-48 | -1.69E-46 |
| MS.gene058549 | MS.gene068777 | 0.812947 | 3.28E-51 | -1.69E-46 |
| MS.gene058549 | MS.gene069206 | 0.811906 | 5.54E-51 | -1.69E-46 |
| MS.gene058549 | MS.gene070210 | 0.808712 | 2.71E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene07084 | 0.80261 | 5.17E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene070893 | 0.800689 | 1.28E-48 | -1.69E-46 |
| MS.gene058549 | MS.gene071480 | 0.81395 | 1.97E-51 | -1.69E-46 |
| MS.gene058549 | MS.gene071570 | 0.802362 | 5.82E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene072087 | -0.8022 | 6.28E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene072942 | 0.807414 | 5.12E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene073954 | 0.814117 | 1.81E-51 | -1.69E-46 |
| MS.gene058549 | MS.gene074026 | 0.820212 | 7.73E-53 | -1.69E-46 |
| MS.gene058549 | MS.gene074603 | 0.807662 | 4.53E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene074606 | 0.826086 | 3.29E-54 | -1.69E-46 |
| MS.gene058549 | MS.gene08324 | -0.801404 | 9.15E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene08782 | 0.818507 | 1.89E-52 | -1.69E-46 |
| MS.gene058549 | MS.gene09952 | 0.8097 | 1.66E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene20184 | 0.807464 | 4.99E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene21149 | 0.810798 | 9.64E-51 | -1.69E-46 |
| MS.gene058549 | MS.gene21676 | 0.809216 | 2.11E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene21700 | 0.804284 | 2.33E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene21886 | 0.820159 | 7.95E-53 | -1.69E-46 |
| MS.gene058549 | MS.gene21926 | 0.807899 | 4.03E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene21928 | 0.820672 | 6.06E-53 | -1.69E-46 |
| MS.gene058549 | MS.gene22270 | 0.834221 | 3.40E-56 | -1.69E-46 |
| MS.gene058549 | MS.gene22691 | 0.808078 | 3.69E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene22820 | -0.826859 | 2.15E-54 | -1.69E-46 |
| MS.gene058549 | MS.gene22833 | 0.805072 | 1.59E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene24608 | 0.803908 | 2.78E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene24692 | 0.819176 | 1.33E-52 | -1.69E-46 |
| MS.gene058549 | MS.gene28709 | 0.803421 | 3.51E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene28922 | -0.824202 | 9.17E-54 | -1.69E-46 |
| MS.gene058549 | MS.gene28944 | 0.843397 | 1.44E-58 | -1.69E-46 |
| MS.gene058549 | MS.gene30246 | 0.860493 | 1.99E-63 | -1.69E-46 |
| MS.gene058549 | MS.gene30855 | 0.811407 | 7.11E-51 | -1.69E-46 |
| MS.gene058549 | MS.gene30920 | 0.800206 | 1.61E-48 | -1.69E-46 |
| MS.gene058549 | MS.gene31503 | 0.804073 | 2.57E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene33160 | 0.80385 | 2.86E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene35121 | 0.803042 | 4.21E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene35271 | 0.80112 | 1.05E-48 | -1.69E-46 |
| MS.gene058549 | MS.gene35967 | 0.820714 | 5.93E-53 | -1.69E-46 |
| MS.gene058549 | MS.gene36384 | 0.810032 | 1.41E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene38754 | 0.809265 | 2.06E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene39572 | 0.820327 | 7.27E-53 | -1.69E-46 |
| MS.gene058549 | MS.gene39955 | 0.835817 | 1.35E-56 | -1.69E-46 |
| MS.gene058549 | MS.gene40595 | 0.801067 | 1.07E-48 | -1.69E-46 |
| MS.gene058549 | MS.gene41103 | -0.81277 | 3.59E-51 | -1.69E-46 |
| MS.gene058549 | MS.gene41121 | 0.818291 | 2.12E-52 | -1.69E-46 |
| MS.gene058549 | MS.gene41455 | 0.812777 | 3.57E-51 | -1.69E-46 |
| MS.gene058549 | MS.gene41838 | 0.800483 | 1.41E-48 | -1.69E-46 |
| MS.gene058549 | MS.gene42125 | 0.833798 | 4.34E-56 | -1.69E-46 |
| MS.gene058549 | MS.gene46128 | 0.808123 | 3.61E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene46374 | 0.800268 | 1.56E-48 | -1.69E-46 |
| MS.gene058549 | MS.gene47531 | 0.826238 | 3.03E-54 | -1.69E-46 |
| MS.gene058549 | MS.gene48988 | 0.803033 | 4.23E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene49386 | 0.805872 | 1.08E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene49839 | 0.800101 | 1.69E-48 | -1.69E-46 |
| MS.gene058549 | MS.gene49940 | 0.807855 | 4.12E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene50708 | 0.809251 | 2.08E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene52448 | 0.813251 | 2.81E-51 | -1.69E-46 |
| MS.gene058549 | MS.gene53579 | 0.844128 | 9.16E-59 | -1.69E-46 |
| MS.gene058549 | MS.gene55396 | 0.810362 | 1.20E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene55540 | 0.817743 | 2.81E-52 | -1.69E-46 |
| MS.gene058549 | MS.gene56227 | 0.81471 | 1.34E-51 | -1.69E-46 |
| MS.gene058549 | MS.gene56468 | 0.815707 | 8.06E-52 | -1.69E-46 |
| MS.gene058549 | MS.gene56868 | 0.800022 | 1.75E-48 | -1.69E-46 |
| MS.gene058549 | MS.gene58503 | 0.805011 | 1.64E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene58928 | -0.802909 | 4.49E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene59506 | 0.804474 | 2.12E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene59948 | 0.817155 | 3.82E-52 | -1.69E-46 |
| MS.gene058549 | MS.gene59949 | 0.832827 | 7.57E-56 | -1.69E-46 |
| MS.gene058549 | MS.gene61074 | 0.832105 | 1.14E-55 | -1.69E-46 |
| MS.gene058549 | MS.gene61183 | 0.808538 | 2.95E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene62393 | 0.832605 | 8.59E-56 | -1.69E-46 |
| MS.gene058549 | MS.gene62681 | 0.810555 | 1.09E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene64243 | 0.82925 | 5.72E-55 | -1.69E-46 |
| MS.gene058549 | MS.gene64417 | 0.801803 | 7.58E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene64807 | 0.800025 | 1.75E-48 | -1.69E-46 |
| MS.gene058549 | MS.gene65895 | 0.809881 | 1.52E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene67346 | 0.812145 | 4.91E-51 | -1.69E-46 |
| MS.gene058549 | MS.gene68873 | 0.824828 | 6.53E-54 | -1.69E-46 |
| MS.gene058549 | MS.gene71949 | 0.820838 | 5.55E-53 | -1.69E-46 |
| MS.gene058549 | MS.gene72851 | -0.805984 | 1.03E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene73820 | 0.814353 | 1.61E-51 | -1.69E-46 |
| MS.gene058549 | MS.gene74444 | 0.841802 | 3.81E-58 | -1.69E-46 |
| MS.gene058549 | MS.gene74503 | 0.806788 | 6.94E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene75003 | 0.806191 | 9.27E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene78682 | 0.809858 | 1.54E-50 | -1.69E-46 |
| MS.gene058549 | MS.gene78959 | 0.801516 | 8.68E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene81406 | 0.811996 | 5.29E-51 | -1.69E-46 |
| MS.gene058549 | MS.gene82805 | 0.803307 | 3.71E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene82879 | 0.829346 | 5.42E-55 | -1.69E-46 |
| MS.gene058549 | MS.gene85277 | 0.81903 | 1.44E-52 | -1.69E-46 |
| MS.gene058549 | MS.gene85663 | 0.817361 | 3.43E-52 | -1.69E-46 |
| MS.gene058549 | MS.gene86380 | 0.813477 | 2.51E-51 | -1.69E-46 |
| MS.gene058549 | MS.gene87285 | 0.819222 | 1.30E-52 | -1.69E-46 |
| MS.gene058549 | MS.gene87795 | 0.800988 | 1.11E-48 | -1.69E-46 |
| MS.gene058549 | MS.gene90525 | 0.813911 | 2.01E-51 | -1.69E-46 |
| MS.gene058549 | MS.gene90981 | 0.801147 | 1.03E-48 | -1.69E-46 |
| MS.gene058549 | MS.gene91907 | 0.830115 | 3.52E-55 | -1.69E-46 |
| MS.gene058549 | MS.gene92188 | 0.812237 | 4.69E-51 | -1.69E-46 |
| MS.gene058549 | MS.gene93764 | 0.804899 | 1.73E-49 | -1.69E-46 |
| MS.gene058549 | MS.gene96322 | 0.807891 | 4.05E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013885 | MS.gene058549 | PPI |
| MS.gene042550 | MS.gene058549 | PPI |
| MS.gene41848 | MS.gene058549 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058549.t1 | MTR_1g115415 | 98.190 | 442 | 8 | 0 | 1 | 442 | 60 | 501 | 0.0 | 873 |
| MS.gene058549.t1 | MTR_8g105560 | 83.182 | 440 | 21 | 2 | 1 | 440 | 38 | 424 | 0.0 | 707 |
| MS.gene058549.t1 | MTR_5g068860 | 53.250 | 400 | 185 | 1 | 12 | 409 | 103 | 502 | 1.94e-152 | 443 |
| MS.gene058549.t1 | MTR_4g070060 | 25.278 | 360 | 259 | 5 | 45 | 397 | 235 | 591 | 1.17e-34 | 136 |
| MS.gene058549.t1 | MTR_6g003960 | 27.164 | 335 | 238 | 6 | 65 | 397 | 263 | 593 | 4.25e-27 | 114 |
| MS.gene058549.t1 | MTR_2g034600 | 26.168 | 321 | 191 | 6 | 79 | 396 | 210 | 487 | 1.43e-26 | 112 |
| MS.gene058549.t1 | MTR_2g034600 | 22.348 | 264 | 179 | 5 | 8 | 267 | 189 | 430 | 4.94e-12 | 68.2 |
| MS.gene058549.t1 | MTR_2g034600 | 27.972 | 286 | 162 | 5 | 149 | 396 | 269 | 548 | 1.59e-26 | 112 |
| MS.gene058549.t1 | MTR_2g034600 | 22.348 | 264 | 179 | 5 | 8 | 267 | 250 | 491 | 4.55e-12 | 68.2 |
| MS.gene058549.t1 | MTR_2g034600 | 27.972 | 286 | 162 | 5 | 149 | 396 | 273 | 552 | 1.84e-26 | 112 |
| MS.gene058549.t1 | MTR_2g034600 | 22.348 | 264 | 179 | 5 | 8 | 267 | 254 | 495 | 4.57e-12 | 68.2 |
| MS.gene058549.t1 | MTR_4g084630 | 22.436 | 312 | 198 | 5 | 86 | 392 | 47 | 319 | 8.14e-26 | 107 |
| MS.gene058549.t1 | MTR_4g084630 | 25.108 | 231 | 147 | 3 | 23 | 252 | 45 | 250 | 2.97e-17 | 82.8 |
| MS.gene058549.t1 | MTR_5g094610 | 24.373 | 279 | 200 | 7 | 102 | 373 | 176 | 450 | 1.42e-19 | 91.3 |
| MS.gene058549.t1 | MTR_5g094610 | 24.627 | 268 | 186 | 8 | 22 | 277 | 194 | 457 | 5.92e-16 | 80.5 |
| MS.gene058549.t1 | MTR_2g049780 | 26.923 | 208 | 116 | 3 | 222 | 393 | 99 | 306 | 4.95e-16 | 79.0 |
| MS.gene058549.t1 | MTR_5g041630 | 27.059 | 255 | 138 | 7 | 151 | 397 | 88 | 302 | 6.43e-14 | 72.8 |
| MS.gene058549.t1 | MTR_2g067230 | 23.659 | 317 | 151 | 11 | 86 | 397 | 75 | 305 | 1.69e-13 | 71.6 |
| MS.gene058549.t1 | MTR_3g092710 | 22.819 | 298 | 184 | 7 | 99 | 391 | 235 | 491 | 1.55e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058549.t1 | AT2G44020 | 80.587 | 443 | 85 | 1 | 1 | 442 | 65 | 507 | 0.0 | 733 |
| MS.gene058549.t1 | AT4G02990 | 53.181 | 393 | 184 | 0 | 13 | 405 | 112 | 504 | 8.61e-153 | 444 |
| MS.gene058549.t1 | AT4G02990 | 53.181 | 393 | 184 | 0 | 13 | 405 | 112 | 504 | 8.61e-153 | 444 |
| MS.gene058549.t1 | AT2G21710 | 24.716 | 352 | 261 | 3 | 77 | 427 | 278 | 626 | 8.59e-39 | 148 |
| MS.gene058549.t1 | AT2G21710 | 26.070 | 257 | 176 | 5 | 7 | 252 | 272 | 525 | 2.37e-17 | 85.1 |
| MS.gene058549.t1 | AT1G78930 | 26.488 | 336 | 240 | 6 | 65 | 397 | 249 | 580 | 1.56e-31 | 127 |
| MS.gene058549.t1 | AT4G38160 | 25.547 | 274 | 195 | 4 | 128 | 395 | 54 | 324 | 7.63e-29 | 116 |
| MS.gene058549.t1 | AT4G38160 | 24.020 | 204 | 153 | 2 | 65 | 266 | 63 | 266 | 1.09e-15 | 78.2 |
| MS.gene058549.t1 | AT4G38160 | 25.547 | 274 | 195 | 4 | 128 | 395 | 54 | 324 | 7.63e-29 | 116 |
| MS.gene058549.t1 | AT4G38160 | 24.020 | 204 | 153 | 2 | 65 | 266 | 63 | 266 | 1.09e-15 | 78.2 |
| MS.gene058549.t1 | AT4G38160 | 25.547 | 274 | 195 | 4 | 128 | 395 | 54 | 324 | 1.52e-28 | 115 |
| MS.gene058549.t1 | AT4G38160 | 23.902 | 205 | 154 | 2 | 65 | 267 | 63 | 267 | 1.59e-15 | 78.2 |
| MS.gene058549.t1 | AT4G38160 | 25.547 | 274 | 195 | 4 | 128 | 395 | 54 | 324 | 1.56e-28 | 116 |
| MS.gene058549.t1 | AT4G38160 | 23.902 | 205 | 154 | 2 | 65 | 267 | 63 | 267 | 1.42e-15 | 78.6 |
| MS.gene058549.t1 | AT2G21710 | 23.571 | 280 | 212 | 2 | 77 | 355 | 278 | 556 | 1.20e-26 | 112 |
| MS.gene058549.t1 | AT2G21710 | 26.070 | 257 | 176 | 5 | 7 | 252 | 272 | 525 | 1.93e-17 | 85.1 |
| MS.gene058549.t1 | AT2G21710 | 23.381 | 278 | 211 | 2 | 77 | 353 | 278 | 554 | 8.79e-26 | 110 |
| MS.gene058549.t1 | AT2G21710 | 26.070 | 257 | 176 | 5 | 7 | 252 | 272 | 525 | 2.01e-17 | 85.1 |
| MS.gene058549.t1 | AT4G14605 | 25.130 | 386 | 268 | 9 | 14 | 392 | 97 | 468 | 6.50e-24 | 104 |
| MS.gene058549.t1 | AT4G14605 | 25.130 | 386 | 268 | 9 | 14 | 392 | 97 | 468 | 6.50e-24 | 104 |
| MS.gene058549.t1 | AT5G55580 | 26.484 | 219 | 154 | 4 | 158 | 371 | 119 | 335 | 2.87e-19 | 89.7 |
| MS.gene058549.t1 | AT5G55580 | 25.385 | 260 | 179 | 7 | 20 | 267 | 79 | 335 | 1.46e-16 | 81.6 |
| MS.gene058549.t1 | AT5G55580 | 23.853 | 218 | 160 | 3 | 84 | 299 | 117 | 330 | 2.31e-14 | 74.7 |
| MS.gene058549.t1 | AT5G55580 | 26.484 | 219 | 154 | 4 | 158 | 371 | 225 | 441 | 1.83e-18 | 88.2 |
| MS.gene058549.t1 | AT5G55580 | 25.385 | 260 | 179 | 7 | 20 | 267 | 185 | 441 | 1.98e-16 | 81.6 |
| MS.gene058549.t1 | AT5G55580 | 23.767 | 223 | 164 | 3 | 84 | 304 | 223 | 441 | 6.22e-14 | 73.9 |
| MS.gene058549.t1 | AT5G54180 | 23.311 | 296 | 184 | 7 | 101 | 393 | 235 | 490 | 3.66e-15 | 77.8 |
| MS.gene058549.t1 | AT1G61980 | 24.118 | 340 | 235 | 10 | 77 | 403 | 81 | 410 | 1.16e-14 | 75.9 |
| MS.gene058549.t1 | AT1G61980 | 24.118 | 340 | 235 | 10 | 77 | 403 | 81 | 410 | 1.16e-14 | 75.9 |
| MS.gene058549.t1 | AT1G61980 | 24.118 | 340 | 235 | 10 | 77 | 403 | 81 | 410 | 1.16e-14 | 75.9 |
| MS.gene058549.t1 | AT2G34620 | 26.887 | 212 | 119 | 4 | 222 | 397 | 85 | 296 | 1.65e-13 | 71.6 |
| MS.gene058549.t1 | AT2G03050 | 29.317 | 249 | 151 | 9 | 158 | 395 | 38 | 272 | 4.67e-13 | 69.7 |
| MS.gene058549.t1 | AT2G03050 | 29.317 | 249 | 151 | 9 | 158 | 395 | 39 | 273 | 4.77e-13 | 69.7 |
| MS.gene058549.t1 | AT5G55580 | 25.000 | 172 | 127 | 2 | 84 | 253 | 223 | 394 | 2.12e-12 | 68.9 |
| MS.gene058549.t1 | AT5G55580 | 26.943 | 193 | 129 | 5 | 20 | 200 | 185 | 377 | 2.93e-12 | 68.6 |
| MS.gene058549.t1 | AT2G36000 | 23.506 | 251 | 169 | 8 | 158 | 399 | 79 | 315 | 4.98e-12 | 67.0 |
| MS.gene058549.t1 | AT2G36000 | 23.387 | 248 | 167 | 8 | 158 | 396 | 79 | 312 | 1.11e-11 | 66.2 |
Find 98 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCAGTATCCTTTGATTT+TGG | 0.073063 | 4.4:+1888440 | MS.gene058549:CDS |
| GTTGAGTTTATTCAGAAATT+AGG | 0.154219 | 4.4:+1888399 | MS.gene058549:CDS |
| GTTGATTACTTGGTTAATTT+AGG | 0.165369 | 4.4:+1888819 | MS.gene058549:CDS |
| GCTCAGTATCCGCAGATTAT+TGG | 0.227610 | 4.4:+1888981 | MS.gene058549:CDS |
| TCCTGATGAATTGCAGGATT+TGG | 0.241747 | 4.4:+1888341 | MS.gene058549:CDS |
| TTGATTACTTGGTTAATTTA+GGG | 0.248506 | 4.4:+1888820 | MS.gene058549:CDS |
| GGATAAAATGTTCGTTGAAT+TGG | 0.261081 | 4.4:+1889369 | MS.gene058549:CDS |
| AGAATACTTCACTTATAGTT+TGG | 0.295127 | 4.4:+1889304 | MS.gene058549:CDS |
| CTCAGTATCCGCAGATTATT+GGG | 0.297010 | 4.4:+1888982 | MS.gene058549:CDS |
| CTTCGATTATCTCAAGGGTT+TGG | 0.298946 | 4.4:+1888311 | MS.gene058549:CDS |
| GTTGATTGTTTGATTAGTTT+TGG | 0.307251 | 4.4:+1888927 | MS.gene058549:CDS |
| CTCTTAAGCCTCTGGTATCT+AGG | 0.309752 | 4.4:-1889341 | None:intergenic |
| TTCGATTATCTCAAGGGTTT+GGG | 0.314201 | 4.4:+1888312 | MS.gene058549:CDS |
| TTGAGTTTATTCAGAAATTA+GGG | 0.329984 | 4.4:+1888400 | MS.gene058549:CDS |
| GATTATTGGGTTGCCTCTTA+AGG | 0.337713 | 4.4:+1888995 | MS.gene058549:CDS |
| CTTCAACCGTTGAAGTTATG+AGG | 0.356463 | 4.4:+1888370 | MS.gene058549:CDS |
| AATTATTCCTGATGAATTGC+AGG | 0.358521 | 4.4:+1888335 | MS.gene058549:CDS |
| CCTGTTATTAAGTTTCTTAG+AGG | 0.361016 | 4.4:+1888597 | MS.gene058549:CDS |
| AAACTATAAGTGAAGTATTC+TGG | 0.362016 | 4.4:-1889302 | None:intergenic |
| TCAAAATGTGATTATGAAAC+CGG | 0.364444 | 4.4:+1889121 | MS.gene058549:CDS |
| CTAATCAAACAATCAACATT+AGG | 0.365413 | 4.4:-1888921 | None:intergenic |
| CCTCTAAGAAACTTAATAAC+AGG | 0.368936 | 4.4:-1888597 | None:intergenic |
| TTAGTATTGGTGTTAATCCT+AGG | 0.373470 | 4.4:+1888724 | MS.gene058549:CDS |
| TCCCCTTGCTCTTAAGCCTC+TGG | 0.375995 | 4.4:-1889349 | None:intergenic |
| GAGATTTGAAGAGAGATTGC+AGG | 0.401297 | 4.4:+1889412 | MS.gene058549:CDS |
| GTCGCAGGATGTGGCTAGTA+TGG | 0.403205 | 4.4:+1889172 | MS.gene058549:CDS |
| GTAGCTTATCTTGTTAGTAT+TGG | 0.406186 | 4.4:+1888711 | MS.gene058549:CDS |
| CTCATAACTTCAACGGTTGA+AGG | 0.413170 | 4.4:-1888369 | None:intergenic |
| TCTGAAACTATGTCGTTTCC+TGG | 0.421365 | 4.4:-1889497 | None:intergenic |
| GAGAAAAGAGCTTATTTACT+TGG | 0.423347 | 4.4:+1888873 | MS.gene058549:CDS |
| ACCACCCTCGCAAACCCTTC+CGG | 0.428125 | 4.4:-1889068 | None:intergenic |
| GAAGACAATTTAGCCTTAAG+AGG | 0.431995 | 4.4:-1889008 | None:intergenic |
| GCAATCTCTCTTCAAATCTC+TGG | 0.437449 | 4.4:-1889409 | None:intergenic |
| GAATGAAGGACCTATACTTT+CGG | 0.437668 | 4.4:-1889450 | None:intergenic |
| TCCGGAAGGGTTTGCGAGGG+TGG | 0.445823 | 4.4:+1889067 | MS.gene058549:CDS |
| GGTGTTAATCCTAGGGATAT+TGG | 0.451217 | 4.4:+1888732 | MS.gene058549:CDS |
| TACTTCTTCAAAAGTGAGAT+GGG | 0.459036 | 4.4:+1889251 | MS.gene058549:CDS |
| GGAAGGGTTTGCGAGGGTGG+TGG | 0.459551 | 4.4:+1889070 | MS.gene058549:CDS |
| GAGGAAGGAATGTTTGCCTT+CGG | 0.461475 | 4.4:+1888953 | MS.gene058549:CDS |
| CGAGATGCCTACTGTTACAT+GGG | 0.462699 | 4.4:+1888242 | None:intergenic |
| TCCAAATCCTGCAATTCATC+AGG | 0.465291 | 4.4:-1888342 | None:intergenic |
| CATAGTTTCAGATGAGGAAG+AGG | 0.486125 | 4.4:+1889508 | MS.gene058549:CDS |
| ATCCTAGCTAGAATCTTCTT+AGG | 0.491214 | 4.4:-1888846 | None:intergenic |
| GGGATTTCTAGGTCTAAACT+TGG | 0.492563 | 4.4:+1888516 | MS.gene058549:CDS |
| ATAGGTCCTTCATTCCGTAT+TGG | 0.501976 | 4.4:+1889458 | MS.gene058549:CDS |
| TACCAGAGGCTTAAGAGCAA+GGG | 0.502139 | 4.4:+1889347 | MS.gene058549:CDS |
| CATCATCTTCGATTATCTCA+AGG | 0.503798 | 4.4:+1888305 | MS.gene058549:CDS |
| GGCAATACCGTCGCAGGATG+TGG | 0.504137 | 4.4:+1889163 | MS.gene058549:CDS |
| TTACTTCTTCAAAAGTGAGA+TGG | 0.508844 | 4.4:+1889250 | MS.gene058549:CDS |
| TCCTAGGGATATTGGTCCAA+TGG | 0.513309 | 4.4:+1888740 | MS.gene058549:CDS |
| GTTACATGGGGTGTAATTCA+AGG | 0.515509 | 4.4:+1888255 | MS.gene058549:CDS |
| TTAACCAAGTAATCAACAAA+AGG | 0.515918 | 4.4:-1888813 | None:intergenic |
| TTTGAAGCTGAAGATTGATC+CGG | 0.520863 | 4.4:+1889049 | MS.gene058549:CDS |
| GATGTGGAGAAAGATGATAT+TGG | 0.522013 | 4.4:+1888624 | MS.gene058549:CDS |
| TAGTATTGGTGTTAATCCTA+GGG | 0.522188 | 4.4:+1888725 | MS.gene058549:CDS |
| ACGAGATGCCTACTGTTACA+TGG | 0.523419 | 4.4:+1888241 | None:intergenic |
| TATATTGAAACCGAAAGTAT+AGG | 0.527577 | 4.4:+1889440 | MS.gene058549:CDS |
| TAAGGATACTGTGTAACCAT+TGG | 0.531997 | 4.4:-1888756 | None:intergenic |
| ATCATCTTCGATTATCTCAA+GGG | 0.534022 | 4.4:+1888306 | MS.gene058549:CDS |
| GCTCTAATTTCCCACCAATA+CGG | 0.538425 | 4.4:-1889472 | None:intergenic |
| GGTCCTTCATTCCGTATTGG+TGG | 0.539928 | 4.4:+1889461 | MS.gene058549:CDS |
| AGTTTAAACCCTAAAAGTTG+AGG | 0.546911 | 4.4:-1888666 | None:intergenic |
| AGCTGAAGATTGATCCGGAA+GGG | 0.553058 | 4.4:+1889054 | MS.gene058549:CDS |
| TTCCCACCAATACGGAATGA+AGG | 0.553754 | 4.4:-1889464 | None:intergenic |
| ACTCGCAGCGCAATCAATTG+AGG | 0.555993 | 4.4:-1889206 | None:intergenic |
| GTCCTTCATTCCGTATTGGT+GGG | 0.557863 | 4.4:+1889462 | MS.gene058549:CDS |
| TTCAACCGTTGAAGTTATGA+GGG | 0.560167 | 4.4:+1888371 | MS.gene058549:CDS |
| AGATTTGAAGAGAGATTGCA+GGG | 0.561148 | 4.4:+1889413 | MS.gene058549:CDS |
| ATACCAGAGGCTTAAGAGCA+AGG | 0.565715 | 4.4:+1889346 | MS.gene058549:CDS |
| CAAAGAGAAACTCGTTTCGC+GGG | 0.570276 | 4.4:+1888281 | MS.gene058549:CDS |
| GAAGATTCTAGCTAGGATGT+TGG | 0.572863 | 4.4:+1888851 | MS.gene058549:CDS |
| GCAAAGAGAAACTCGTTTCG+CGG | 0.577091 | 4.4:+1888280 | MS.gene058549:CDS |
| ACACTAGCATGCAAAACTTG+TGG | 0.577739 | 4.4:-1888558 | None:intergenic |
| TGGTAGGGCAATACCGTCGC+AGG | 0.580954 | 4.4:+1889157 | MS.gene058549:CDS |
| ACGTTCCCTCATAACTTCAA+CGG | 0.581773 | 4.4:-1888376 | None:intergenic |
| GAGGCCTGTAAAAGAGCTTG+TGG | 0.585209 | 4.4:+1889274 | MS.gene058549:CDS |
| ACACTACAGCCCAAAATCAA+AGG | 0.590303 | 4.4:-1888450 | None:intergenic |
| ACCAGAGGCTTAAGAGCAAG+GGG | 0.605082 | 4.4:+1889348 | MS.gene058549:CDS |
| GGTGGGAAATTAGAGCTACC+AGG | 0.611291 | 4.4:+1889479 | MS.gene058549:CDS |
| TTGATCCGGAAGGGTTTGCG+AGG | 0.614047 | 4.4:+1889063 | MS.gene058549:CDS |
| TGCCTAAGAAGATTCTAGCT+AGG | 0.620780 | 4.4:+1888844 | MS.gene058549:CDS |
| TCTTCAAAAGTGAGATGGGG+AGG | 0.627180 | 4.4:+1889255 | MS.gene058549:CDS |
| GTTTCTTAGAGGACTTGATG+TGG | 0.627869 | 4.4:+1888608 | MS.gene058549:CDS |
| GGTGGTGGAGAAGATGCCAC+AGG | 0.628330 | 4.4:+1889085 | MS.gene058549:CDS |
| ACCATTGGACCAATATCCCT+AGG | 0.638044 | 4.4:-1888741 | None:intergenic |
| ATTACACCCCATGTAACAGT+AGG | 0.644138 | 4.4:-1888249 | None:intergenic |
| ACTTCTTCAAAAGTGAGATG+GGG | 0.645282 | 4.4:+1889252 | MS.gene058549:CDS |
| TGATGAAGACTAACCACCTG+TGG | 0.651476 | 4.4:-1889101 | None:intergenic |
| TGATCCGGAAGGGTTTGCGA+GGG | 0.652425 | 4.4:+1889064 | MS.gene058549:CDS |
| TGAAATGCTATACAGAAGAA+CGG | 0.652624 | 4.4:+1889541 | MS.gene058549:CDS |
| AAACGACATAGTTTCAGATG+AGG | 0.658299 | 4.4:+1889502 | MS.gene058549:CDS |
| AAGCTGAAGATTGATCCGGA+AGG | 0.664980 | 4.4:+1889053 | MS.gene058549:CDS |
| ATACTAGCCACATCCTGCGA+CGG | 0.678965 | 4.4:-1889170 | None:intergenic |
| GGTGGAGAAGATGCCACAGG+TGG | 0.679410 | 4.4:+1889088 | MS.gene058549:CDS |
| GGATACTGAGCAATAACCGA+AGG | 0.689064 | 4.4:-1888969 | None:intergenic |
| AGAGGCAACCCAATAATCTG+CGG | 0.697237 | 4.4:-1888990 | None:intergenic |
| GAATTAAACCTAGATACCAG+AGG | 0.721224 | 4.4:+1889333 | MS.gene058549:CDS |
| GAGATGCCTACTGTTACATG+GGG | 0.725465 | 4.4:+1888243 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAACTGAAAAAATATTGTT+GGG | - | chr4.4:1889033-1889052 | None:intergenic | 20.0% |
| !! | TCAAACTGAAAAAATATTGT+TGG | - | chr4.4:1889034-1889053 | None:intergenic | 20.0% |
| !! | TTGAGTTTATTCAGAAATTA+GGG | + | chr4.4:1888400-1888419 | MS.gene058549:CDS | 20.0% |
| !! | TTGATTACTTGGTTAATTTA+GGG | + | chr4.4:1888820-1888839 | MS.gene058549:CDS | 20.0% |
| !!! | AAAAATATCCTCAACTTTTA+GGG | + | chr4.4:1888658-1888677 | MS.gene058549:CDS | 20.0% |
| !!! | TAGGGTATTTAGAAAAAATT+GGG | + | chr4.4:1888496-1888515 | MS.gene058549:CDS | 20.0% |
| !!! | TTAGGGTATTTAGAAAAAAT+TGG | + | chr4.4:1888495-1888514 | MS.gene058549:CDS | 20.0% |
| ! | AGAATACTTCACTTATAGTT+TGG | + | chr4.4:1889304-1889323 | MS.gene058549:CDS | 25.0% |
| ! | CTAATCAAACAATCAACATT+AGG | - | chr4.4:1888924-1888943 | None:intergenic | 25.0% |
| ! | GTTGAGTTTATTCAGAAATT+AGG | + | chr4.4:1888399-1888418 | MS.gene058549:CDS | 25.0% |
| ! | GTTGATTACTTGGTTAATTT+AGG | + | chr4.4:1888819-1888838 | MS.gene058549:CDS | 25.0% |
| ! | TAGAAAAAATTGGGATTTCT+AGG | + | chr4.4:1888505-1888524 | MS.gene058549:CDS | 25.0% |
| ! | TCAAAATGTGATTATGAAAC+CGG | + | chr4.4:1889121-1889140 | MS.gene058549:CDS | 25.0% |
| ! | TTAACCAAGTAATCAACAAA+AGG | - | chr4.4:1888816-1888835 | None:intergenic | 25.0% |
| !! | AAAAACATGATTCCTGTTTT+AGG | + | chr4.4:1888477-1888496 | MS.gene058549:CDS | 25.0% |
| !! | AAAACATGATTCCTGTTTTA+GGG | + | chr4.4:1888478-1888497 | MS.gene058549:CDS | 25.0% |
| !! | AAACTATAAGTGAAGTATTC+TGG | - | chr4.4:1889305-1889324 | None:intergenic | 25.0% |
| !! | CAAAAATATCCTCAACTTTT+AGG | + | chr4.4:1888657-1888676 | MS.gene058549:CDS | 25.0% |
| !! | TATATTGAAACCGAAAGTAT+AGG | + | chr4.4:1889440-1889459 | MS.gene058549:CDS | 25.0% |
| !! | TTTTCTAAATACCCTAAAAC+AGG | - | chr4.4:1888492-1888511 | None:intergenic | 25.0% |
| !!! | AAATCAGTATCCTTTGATTT+TGG | + | chr4.4:1888440-1888459 | MS.gene058549:CDS | 25.0% |
| !!! | AATCAGTATCCTTTGATTTT+GGG | + | chr4.4:1888441-1888460 | MS.gene058549:CDS | 25.0% |
| !!! | ACACAGTATCCTTATTTTTT+AGG | + | chr4.4:1888765-1888784 | MS.gene058549:CDS | 25.0% |
| !!! | CACAGTATCCTTATTTTTTA+GGG | + | chr4.4:1888766-1888785 | MS.gene058549:CDS | 25.0% |
| !!! | GTTGATTGTTTGATTAGTTT+TGG | + | chr4.4:1888927-1888946 | MS.gene058549:CDS | 25.0% |
| AATTATTCCTGATGAATTGC+AGG | + | chr4.4:1888335-1888354 | MS.gene058549:CDS | 30.0% | |
| ACTCTCATCCCTAAAAAATA+AGG | - | chr4.4:1888777-1888796 | None:intergenic | 30.0% | |
| AGTTTAAACCCTAAAAGTTG+AGG | - | chr4.4:1888669-1888688 | None:intergenic | 30.0% | |
| ATCATCTTCGATTATCTCAA+GGG | + | chr4.4:1888306-1888325 | MS.gene058549:CDS | 30.0% | |
| CCTGTTATTAAGTTTCTTAG+AGG | + | chr4.4:1888597-1888616 | MS.gene058549:CDS | 30.0% | |
| GAGAAAAGAGCTTATTTACT+TGG | + | chr4.4:1888873-1888892 | MS.gene058549:CDS | 30.0% | |
| GGATAAAATGTTCGTTGAAT+TGG | + | chr4.4:1889369-1889388 | MS.gene058549:CDS | 30.0% | |
| GTAGCTTATCTTGTTAGTAT+TGG | + | chr4.4:1888711-1888730 | MS.gene058549:CDS | 30.0% | |
| TACTTCTTCAAAAGTGAGAT+GGG | + | chr4.4:1889251-1889270 | MS.gene058549:CDS | 30.0% | |
| TGAAATGCTATACAGAAGAA+CGG | + | chr4.4:1889541-1889560 | MS.gene058549:CDS | 30.0% | |
| TTACTTCTTCAAAAGTGAGA+TGG | + | chr4.4:1889250-1889269 | MS.gene058549:CDS | 30.0% | |
| ! | CCTCTAAGAAACTTAATAAC+AGG | - | chr4.4:1888600-1888619 | None:intergenic | 30.0% |
| !! | AAAGCCTTTTGTTGATTACT+TGG | + | chr4.4:1888809-1888828 | MS.gene058549:CDS | 30.0% |
| !! | TAGTATTGGTGTTAATCCTA+GGG | + | chr4.4:1888725-1888744 | MS.gene058549:CDS | 30.0% |
| !! | TTAGTATTGGTGTTAATCCT+AGG | + | chr4.4:1888724-1888743 | MS.gene058549:CDS | 30.0% |
| !!! | CTTTTAGGGTTTAAACTTGA+AGG | + | chr4.4:1888672-1888691 | MS.gene058549:CDS | 30.0% |
| !!! | GTTTGATTAGTTTTGGTTTG+AGG | + | chr4.4:1888934-1888953 | MS.gene058549:CDS | 30.0% |
| !!! | TATTTTTTAGGGATGAGAGT+TGG | + | chr4.4:1888777-1888796 | MS.gene058549:CDS | 30.0% |
| AAACGACATAGTTTCAGATG+AGG | + | chr4.4:1889502-1889521 | MS.gene058549:CDS | 35.0% | |
| ACTTCTTCAAAAGTGAGATG+GGG | + | chr4.4:1889252-1889271 | MS.gene058549:CDS | 35.0% | |
| AGATTTGAAGAGAGATTGCA+GGG | + | chr4.4:1889413-1889432 | MS.gene058549:CDS | 35.0% | |
| ATCCTAGCTAGAATCTTCTT+AGG | - | chr4.4:1888849-1888868 | None:intergenic | 35.0% | |
| CATCATCTTCGATTATCTCA+AGG | + | chr4.4:1888305-1888324 | MS.gene058549:CDS | 35.0% | |
| CTACCAAGTAAAAACTCAAC+CGG | - | chr4.4:1889143-1889162 | None:intergenic | 35.0% | |
| GAATGAAGGACCTATACTTT+CGG | - | chr4.4:1889453-1889472 | None:intergenic | 35.0% | |
| GAATTAAACCTAGATACCAG+AGG | + | chr4.4:1889333-1889352 | MS.gene058549:CDS | 35.0% | |
| GATGTGGAGAAAGATGATAT+TGG | + | chr4.4:1888624-1888643 | MS.gene058549:CDS | 35.0% | |
| TAAGGATACTGTGTAACCAT+TGG | - | chr4.4:1888759-1888778 | None:intergenic | 35.0% | |
| TTCAACCGTTGAAGTTATGA+GGG | + | chr4.4:1888371-1888390 | MS.gene058549:CDS | 35.0% | |
| TTCGATTATCTCAAGGGTTT+GGG | + | chr4.4:1888312-1888331 | MS.gene058549:CDS | 35.0% | |
| ! | AAACCGGTTGAGTTTTTACT+TGG | + | chr4.4:1889137-1889156 | MS.gene058549:CDS | 35.0% |
| ! | GGTTGAGTTTTTACTTGGTA+GGG | + | chr4.4:1889142-1889161 | MS.gene058549:CDS | 35.0% |
| ! | TTTGAAGCTGAAGATTGATC+CGG | + | chr4.4:1889049-1889068 | MS.gene058549:CDS | 35.0% |
| !! | GAAGACAATTTAGCCTTAAG+AGG | - | chr4.4:1889011-1889030 | None:intergenic | 35.0% |
| !!! | GATTAGTTTTGGTTTGAGGA+AGG | + | chr4.4:1888938-1888957 | MS.gene058549:CDS | 35.0% |
| ACACTACAGCCCAAAATCAA+AGG | - | chr4.4:1888453-1888472 | None:intergenic | 40.0% | |
| ACACTAGCATGCAAAACTTG+TGG | - | chr4.4:1888561-1888580 | None:intergenic | 40.0% | |
| ACGTTCCCTCATAACTTCAA+CGG | - | chr4.4:1888379-1888398 | None:intergenic | 40.0% | |
| ATAGGTCCTTCATTCCGTAT+TGG | + | chr4.4:1889458-1889477 | MS.gene058549:CDS | 40.0% | |
| ATTACACCCCATGTAACAGT+AGG | - | chr4.4:1888252-1888271 | None:intergenic | 40.0% | |
| CATAGTTTCAGATGAGGAAG+AGG | + | chr4.4:1889508-1889527 | MS.gene058549:CDS | 40.0% | |
| CTCAGTATCCGCAGATTATT+GGG | + | chr4.4:1888982-1889001 | MS.gene058549:CDS | 40.0% | |
| CTCATAACTTCAACGGTTGA+AGG | - | chr4.4:1888372-1888391 | None:intergenic | 40.0% | |
| CTTCAACCGTTGAAGTTATG+AGG | + | chr4.4:1888370-1888389 | MS.gene058549:CDS | 40.0% | |
| CTTCGATTATCTCAAGGGTT+TGG | + | chr4.4:1888311-1888330 | MS.gene058549:CDS | 40.0% | |
| GAGATTTGAAGAGAGATTGC+AGG | + | chr4.4:1889412-1889431 | MS.gene058549:CDS | 40.0% | |
| GCAATCTCTCTTCAAATCTC+TGG | - | chr4.4:1889412-1889431 | None:intergenic | 40.0% | |
| GCTCTAATTTCCCACCAATA+CGG | - | chr4.4:1889475-1889494 | None:intergenic | 40.0% | |
| GGTGTTAATCCTAGGGATAT+TGG | + | chr4.4:1888732-1888751 | MS.gene058549:CDS | 40.0% | |
| GTTACATGGGGTGTAATTCA+AGG | + | chr4.4:1888255-1888274 | MS.gene058549:CDS | 40.0% | |
| GTTTCTTAGAGGACTTGATG+TGG | + | chr4.4:1888608-1888627 | MS.gene058549:CDS | 40.0% | |
| TCCAAATCCTGCAATTCATC+AGG | - | chr4.4:1888345-1888364 | None:intergenic | 40.0% | |
| TCCTGATGAATTGCAGGATT+TGG | + | chr4.4:1888341-1888360 | MS.gene058549:CDS | 40.0% | |
| ! | AACTCCACAAGCTCTTTTAC+AGG | - | chr4.4:1889281-1889300 | None:intergenic | 40.0% |
| ! | CGGTTGAGTTTTTACTTGGT+AGG | + | chr4.4:1889141-1889160 | MS.gene058549:CDS | 40.0% |
| ! | GAAGATTCTAGCTAGGATGT+TGG | + | chr4.4:1888851-1888870 | MS.gene058549:CDS | 40.0% |
| ! | GATTATTGGGTTGCCTCTTA+AGG | + | chr4.4:1888995-1889014 | MS.gene058549:CDS | 40.0% |
| ! | GGGATTTCTAGGTCTAAACT+TGG | + | chr4.4:1888516-1888535 | MS.gene058549:CDS | 40.0% |
| ! | TCTGAAACTATGTCGTTTCC+TGG | - | chr4.4:1889500-1889519 | None:intergenic | 40.0% |
| ! | TGATTTTGGGCTGTAGTGTT+CGG | + | chr4.4:1888454-1888473 | MS.gene058549:CDS | 40.0% |
| ! | TGCCTAAGAAGATTCTAGCT+AGG | + | chr4.4:1888844-1888863 | MS.gene058549:CDS | 40.0% |
| AAGCTGAAGATTGATCCGGA+AGG | + | chr4.4:1889053-1889072 | MS.gene058549:CDS | 45.0% | |
| ACCATTGGACCAATATCCCT+AGG | - | chr4.4:1888744-1888763 | None:intergenic | 45.0% | |
| AGAGGCAACCCAATAATCTG+CGG | - | chr4.4:1888993-1889012 | None:intergenic | 45.0% | |
| AGCTGAAGATTGATCCGGAA+GGG | + | chr4.4:1889054-1889073 | MS.gene058549:CDS | 45.0% | |
| ATACCAGAGGCTTAAGAGCA+AGG | + | chr4.4:1889346-1889365 | MS.gene058549:CDS | 45.0% | |
| CAAAGAGAAACTCGTTTCGC+GGG | + | chr4.4:1888281-1888300 | MS.gene058549:CDS | 45.0% | |
| CTCTTAAGCCTCTGGTATCT+AGG | - | chr4.4:1889344-1889363 | None:intergenic | 45.0% | |
| GAGGAAGGAATGTTTGCCTT+CGG | + | chr4.4:1888953-1888972 | MS.gene058549:CDS | 45.0% | |
| GCAAAGAGAAACTCGTTTCG+CGG | + | chr4.4:1888280-1888299 | MS.gene058549:CDS | 45.0% | |
| GCTCAGTATCCGCAGATTAT+TGG | + | chr4.4:1888981-1889000 | MS.gene058549:CDS | 45.0% | |
| GGATACTGAGCAATAACCGA+AGG | - | chr4.4:1888972-1888991 | None:intergenic | 45.0% | |
| TACCAGAGGCTTAAGAGCAA+GGG | + | chr4.4:1889347-1889366 | MS.gene058549:CDS | 45.0% | |
| TCCTAGGGATATTGGTCCAA+TGG | + | chr4.4:1888740-1888759 | MS.gene058549:CDS | 45.0% | |
| TCTTCAAAAGTGAGATGGGG+AGG | + | chr4.4:1889255-1889274 | MS.gene058549:CDS | 45.0% | |
| TGATGAAGACTAACCACCTG+TGG | - | chr4.4:1889104-1889123 | None:intergenic | 45.0% | |
| TTCCCACCAATACGGAATGA+AGG | - | chr4.4:1889467-1889486 | None:intergenic | 45.0% | |
| ! | GTCCTTCATTCCGTATTGGT+GGG | + | chr4.4:1889462-1889481 | MS.gene058549:CDS | 45.0% |
| ACCAGAGGCTTAAGAGCAAG+GGG | + | chr4.4:1889348-1889367 | MS.gene058549:CDS | 50.0% | |
| ACTCGCAGCGCAATCAATTG+AGG | - | chr4.4:1889209-1889228 | None:intergenic | 50.0% | |
| ATACTAGCCACATCCTGCGA+CGG | - | chr4.4:1889173-1889192 | None:intergenic | 50.0% | |
| GAGGCCTGTAAAAGAGCTTG+TGG | + | chr4.4:1889274-1889293 | MS.gene058549:CDS | 50.0% | |
| GGTCCTTCATTCCGTATTGG+TGG | + | chr4.4:1889461-1889480 | MS.gene058549:CDS | 50.0% | |
| GGTGGGAAATTAGAGCTACC+AGG | + | chr4.4:1889479-1889498 | MS.gene058549:CDS | 50.0% | |
| GTCGCAGGATGTGGCTAGTA+TGG | + | chr4.4:1889172-1889191 | MS.gene058549:CDS | 55.0% | |
| TCCCCTTGCTCTTAAGCCTC+TGG | - | chr4.4:1889352-1889371 | None:intergenic | 55.0% | |
| TGATCCGGAAGGGTTTGCGA+GGG | + | chr4.4:1889064-1889083 | MS.gene058549:CDS | 55.0% | |
| TTGATCCGGAAGGGTTTGCG+AGG | + | chr4.4:1889063-1889082 | MS.gene058549:CDS | 55.0% | |
| ACCACCCTCGCAAACCCTTC+CGG | - | chr4.4:1889071-1889090 | None:intergenic | 60.0% | |
| GGCAATACCGTCGCAGGATG+TGG | + | chr4.4:1889163-1889182 | MS.gene058549:CDS | 60.0% | |
| GGTGGAGAAGATGCCACAGG+TGG | + | chr4.4:1889088-1889107 | MS.gene058549:CDS | 60.0% | |
| TGGTAGGGCAATACCGTCGC+AGG | + | chr4.4:1889157-1889176 | MS.gene058549:CDS | 60.0% | |
| !! | GGTGGTGGAGAAGATGCCAC+AGG | + | chr4.4:1889085-1889104 | MS.gene058549:CDS | 60.0% |
| GGAAGGGTTTGCGAGGGTGG+TGG | + | chr4.4:1889070-1889089 | MS.gene058549:CDS | 65.0% | |
| TCCGGAAGGGTTTGCGAGGG+TGG | + | chr4.4:1889067-1889086 | MS.gene058549:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 1888246 | 1889574 | 1888246 | ID=MS.gene058549 |
| chr4.4 | mRNA | 1888246 | 1889574 | 1888246 | ID=MS.gene058549.t1;Parent=MS.gene058549 |
| chr4.4 | exon | 1888246 | 1889574 | 1888246 | ID=MS.gene058549.t1.exon1;Parent=MS.gene058549.t1 |
| chr4.4 | CDS | 1888246 | 1889574 | 1888246 | ID=cds.MS.gene058549.t1;Parent=MS.gene058549.t1 |
| Gene Sequence |
| Protein sequence |
