AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40143

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40143.t1 MTR_4g092140 97.173 672 19 0 1 672 1 672 0.0 1353
MS.gene40143.t1 MTR_2g010760 65.302 562 173 6 109 661 220 768 0.0 719
MS.gene40143.t1 MTR_2g010760 36.296 270 138 7 1 243 1 263 1.69e-31 131
MS.gene40143.t1 MTR_4g081390 49.306 793 269 20 1 671 1 782 0.0 644
MS.gene40143.t1 MTR_2g082570 60.109 549 198 5 132 671 214 750 0.0 634
MS.gene40143.t1 MTR_4g081390 47.645 743 258 19 1 619 1 736 0.0 568
MS.gene40143.t1 MTR_2g082570 56.688 471 186 5 132 593 214 675 7.08e-170 502
MS.gene40143.t1 MTR_7g112420 43.169 366 184 7 305 664 259 606 2.46e-84 284
MS.gene40143.t1 MTR_7g113520 42.328 378 195 6 289 660 94 454 5.47e-84 280
MS.gene40143.t1 MTR_2g069950 43.514 370 192 6 292 660 315 668 5.69e-84 285
MS.gene40143.t1 MTR_1g082920 40.369 379 201 6 289 660 114 474 2.15e-82 276
MS.gene40143.t1 MTR_8g098230 42.714 398 195 8 273 660 440 814 3.09e-82 281
MS.gene40143.t1 MTR_7g112420 42.623 366 180 7 305 664 389 730 6.36e-82 280
MS.gene40143.t1 MTR_8g098230 41.872 406 195 8 273 660 440 822 5.81e-81 278
MS.gene40143.t1 MTR_5g031470 36.145 498 259 10 201 660 248 724 4.66e-80 275
MS.gene40143.t1 MTR_5g049820 38.293 457 237 9 227 659 263 698 2.24e-79 271
MS.gene40143.t1 MTR_7g109130 38.152 422 237 8 244 664 33 431 1.13e-78 265
MS.gene40143.t1 MTR_5g049620 41.842 380 197 6 283 659 340 698 1.19e-78 268
MS.gene40143.t1 MTR_1g087880 40.274 365 193 5 305 664 384 728 1.31e-78 270
MS.gene40143.t1 MTR_1g083770 36.278 532 293 15 145 664 248 745 1.96e-78 269
MS.gene40143.t1 MTR_7g109130 38.152 422 237 8 244 664 112 510 3.58e-78 265
MS.gene40143.t1 MTR_5g025100 36.674 439 241 8 226 657 802 1210 3.74e-78 271
MS.gene40143.t1 MTR_5g096570 40.720 361 192 4 305 660 422 765 4.15e-78 272
MS.gene40143.t1 MTR_8g072430 36.324 457 247 11 222 657 763 1196 6.26e-78 271
MS.gene40143.t1 MTR_7g109130 38.152 422 237 8 244 664 334 732 8.85e-77 265
MS.gene40143.t1 MTR_7g109130 38.118 425 236 9 244 664 334 735 2.45e-76 264
MS.gene40143.t1 MTR_7g091290 38.313 415 221 11 260 660 326 719 5.86e-75 260
MS.gene40143.t1 MTR_3g060900 40.223 358 190 5 305 660 426 761 2.81e-73 256
MS.gene40143.t1 MTR_8g104200 40.865 416 216 10 253 660 454 847 3.92e-73 257
MS.gene40143.t1 MTR_1g081800 36.554 383 222 6 278 657 49 413 1.25e-66 231
MS.gene40143.t1 MTR_7g091290 34.867 413 197 9 260 660 323 675 5.47e-64 229
MS.gene40143.t1 MTR_6g084490 37.366 372 186 8 305 661 465 804 2.67e-60 217
MS.gene40143.t1 MTR_2g096010 37.363 364 205 9 308 658 39 392 2.54e-57 210
MS.gene40143.t1 MTR_1g059730 37.778 360 195 10 317 658 13 361 5.57e-56 206
MS.gene40143.t1 MTR_7g105030 37.500 360 196 10 317 658 9 357 1.54e-55 204
MS.gene40143.t1 MTR_7g105030 37.500 360 196 10 317 658 9 357 1.54e-55 204
MS.gene40143.t1 MTR_8g080910 36.745 381 189 9 303 658 40 393 6.03e-55 203
MS.gene40143.t1 MTR_3g084790 37.602 367 175 11 318 658 99 437 1.04e-54 203
MS.gene40143.t1 MTR_1g067630 37.288 354 201 9 317 658 54 398 2.24e-53 198
MS.gene40143.t1 MTR_4g087040 36.856 369 176 10 317 658 193 531 6.36e-53 198
MS.gene40143.t1 MTR_2g087840 40.379 317 148 8 363 658 130 426 6.23e-52 194
MS.gene40143.t1 MTR_5g066320 35.429 350 208 8 318 658 18 358 1.11e-49 187
MS.gene40143.t1 MTR_3g102170 34.677 372 196 10 318 658 9 364 1.36e-49 187
MS.gene40143.t1 MTR_8g471180 35.734 361 204 8 304 663 133 466 2.07e-49 187
MS.gene40143.t1 MTR_4g123730 36.390 349 172 9 342 658 157 487 8.45e-49 185
MS.gene40143.t1 MTR_1g484960 35.143 350 184 9 318 654 4 323 6.27e-48 182
MS.gene40143.t1 MTR_1g018940 34.959 369 199 12 318 658 9 364 7.78e-48 182
MS.gene40143.t1 MTR_2g055910 35.411 353 192 9 318 658 69 397 1.26e-47 178
MS.gene40143.t1 MTR_4g094882 33.780 373 204 12 317 658 12 372 3.55e-47 180
MS.gene40143.t1 MTR_3g100270 33.884 363 197 9 317 658 9 349 9.28e-47 179
MS.gene40143.t1 MTR_1g017540 35.065 308 167 6 363 657 46 333 9.05e-45 172
MS.gene40143.t1 MTR_4g112350 35.097 359 194 9 318 661 124 458 8.33e-44 168
MS.gene40143.t1 MTR_4g071210 35.345 348 192 12 317 659 89 408 4.76e-43 167
MS.gene40143.t1 MTR_4g071210 35.345 348 192 12 317 659 89 408 5.26e-43 167
MS.gene40143.t1 MTR_3g117330 35.714 350 188 13 317 659 99 418 1.96e-42 166
MS.gene40143.t1 MTR_6g082470 33.894 357 184 8 318 657 31 352 9.56e-41 160
MS.gene40143.t1 MTR_4g124650 32.481 391 206 13 302 668 125 481 4.15e-40 158
MS.gene40143.t1 MTR_7g061020 32.378 349 196 10 318 653 26 347 1.60e-39 154
MS.gene40143.t1 MTR_5g011500 30.319 376 209 11 314 659 54 406 2.51e-39 155
MS.gene40143.t1 MTR_7g093720 33.428 353 198 11 315 659 71 394 8.79e-39 154
MS.gene40143.t1 MTR_5g094310 32.796 372 199 13 310 658 67 410 1.96e-38 153
MS.gene40143.t1 MTR_3g055940 32.808 317 177 8 363 658 108 409 2.38e-38 153
MS.gene40143.t1 MTR_3g113110 33.607 366 183 12 318 657 20 351 1.09e-37 151
MS.gene40143.t1 MTR_4g071900 33.108 296 165 6 363 651 71 340 1.70e-37 150
MS.gene40143.t1 MTR_7g075060 30.541 370 209 9 314 658 49 395 1.45e-36 147
MS.gene40143.t1 MTR_6g086735 34.906 318 174 10 359 671 161 450 2.32e-36 145
MS.gene40143.t1 MTR_6g086735 34.906 318 174 10 359 671 161 450 2.55e-36 145
MS.gene40143.t1 MTR_8g076190 32.022 356 184 11 318 652 20 338 6.77e-36 145
MS.gene40143.t1 MTR_8g076190 32.022 356 184 11 318 652 20 338 1.66e-35 144
MS.gene40143.t1 MTR_5g021650 31.534 352 191 9 318 652 21 339 2.32e-35 144
MS.gene40143.t1 MTR_8g076190 31.680 363 183 11 318 652 20 345 6.17e-35 142
MS.gene40143.t1 MTR_2g101990 31.922 307 178 6 359 660 231 511 9.08e-34 138
MS.gene40143.t1 MTR_1g075680 32.044 362 210 13 318 662 59 401 1.60e-32 134
MS.gene40143.t1 MTR_2g436650 31.962 316 170 8 360 657 165 453 4.46e-31 130
MS.gene40143.t1 MTR_2g436650 31.962 316 170 8 360 657 245 533 7.65e-31 129
MS.gene40143.t1 MTR_4g119980 28.571 392 226 10 288 657 180 539 6.82e-30 126
MS.gene40143.t1 MTR_3g113630 28.834 326 177 12 351 659 137 424 2.50e-20 96.7
MS.gene40143.t1 MTR_3g113630 28.571 329 180 12 348 659 134 424 2.89e-20 96.3
MS.gene40143.t1 MTR_6g053680 26.154 325 205 10 318 636 6 301 1.29e-17 87.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40143.t1 AT4G05190 63.492 567 187 6 109 661 213 773 0.0 696
MS.gene40143.t1 AT4G05190 32.000 275 148 9 1 252 1 259 3.22e-19 92.8
MS.gene40143.t1 AT4G05190 63.492 567 187 6 109 661 200 760 0.0 696
MS.gene40143.t1 AT4G05190 31.200 250 138 8 21 252 13 246 1.53e-15 81.3
MS.gene40143.t1 AT4G21270 59.543 613 229 5 59 661 173 776 0.0 694
MS.gene40143.t1 AT4G27180 59.124 548 195 8 132 666 206 737 0.0 614
MS.gene40143.t1 AT4G27180 59.124 548 195 8 132 666 206 737 0.0 614
MS.gene40143.t1 AT5G54670 58.076 551 200 9 132 672 215 744 0.0 604
MS.gene40143.t1 AT5G54670 58.076 551 200 9 132 672 215 744 0.0 604
MS.gene40143.t1 AT5G54670 58.076 551 200 9 132 672 155 684 0.0 603
MS.gene40143.t1 AT1G72250 46.175 366 181 5 296 660 470 820 3.84e-91 308
MS.gene40143.t1 AT1G72250 46.175 366 181 5 296 660 490 840 4.93e-91 308
MS.gene40143.t1 AT1G72250 46.175 366 181 5 296 660 491 841 5.28e-91 307
MS.gene40143.t1 AT1G72250 46.175 366 181 5 296 660 479 829 5.35e-91 307
MS.gene40143.t1 AT1G73860 35.940 601 282 15 103 660 218 758 3.51e-87 293
MS.gene40143.t1 AT1G73860 35.940 601 282 15 103 660 301 841 6.49e-87 293
MS.gene40143.t1 AT5G27550 42.894 387 197 6 278 660 93 459 3.25e-86 286
MS.gene40143.t1 AT5G27550 42.894 387 197 6 278 660 93 459 3.25e-86 286
MS.gene40143.t1 AT2G22610 42.480 379 198 5 283 660 383 742 1.22e-83 285
MS.gene40143.t1 AT2G22610 42.480 379 198 5 283 660 383 742 1.23e-83 285
MS.gene40143.t1 AT2G22610 42.480 379 198 5 283 660 384 743 2.14e-83 285
MS.gene40143.t1 AT1G18410 45.082 366 161 8 305 660 467 802 3.46e-83 283
MS.gene40143.t1 AT1G18410 44.715 369 166 8 305 660 477 820 6.50e-83 282
MS.gene40143.t1 AT1G18410 44.715 369 166 8 305 660 477 820 6.50e-83 282
MS.gene40143.t1 AT1G63640 42.132 394 203 7 273 660 429 803 4.28e-82 281
MS.gene40143.t1 AT1G63640 42.132 394 203 7 273 660 429 803 4.28e-82 281
MS.gene40143.t1 AT1G63640 42.132 394 203 7 273 660 419 793 4.50e-82 281
MS.gene40143.t1 AT1G63640 42.199 391 200 7 273 660 429 796 4.56e-82 281
MS.gene40143.t1 AT1G63640 42.132 394 203 7 273 660 429 803 5.02e-82 281
MS.gene40143.t1 AT5G41310 41.509 371 183 4 291 660 398 735 6.57e-82 279
MS.gene40143.t1 AT1G18410 45.082 366 161 8 305 660 620 955 1.05e-81 281
MS.gene40143.t1 AT1G18410 44.715 369 166 8 305 660 620 963 2.48e-81 280
MS.gene40143.t1 AT2G47500 41.436 362 193 5 305 664 387 731 4.40e-79 271
MS.gene40143.t1 AT2G47500 41.436 362 193 5 305 664 387 731 5.65e-79 271
MS.gene40143.t1 AT1G09170 37.850 428 242 8 243 664 358 767 3.19e-78 267
MS.gene40143.t1 AT1G09170 37.850 428 242 8 243 664 358 767 4.15e-78 266
MS.gene40143.t1 AT1G09170 37.850 428 242 8 243 664 358 767 4.15e-78 266
MS.gene40143.t1 AT1G09170 37.850 428 242 8 243 664 358 767 6.43e-78 267
MS.gene40143.t1 AT5G27000 41.935 372 179 8 305 664 382 728 1.38e-77 267
MS.gene40143.t1 AT1G09170 37.850 428 242 8 243 664 358 767 1.72e-77 268
MS.gene40143.t1 AT5G65930 36.842 437 251 6 222 657 797 1209 2.36e-77 269
MS.gene40143.t1 AT5G65930 36.842 437 251 6 222 657 796 1208 2.58e-77 269
MS.gene40143.t1 AT5G65930 36.842 437 251 6 222 657 803 1215 2.80e-77 269
MS.gene40143.t1 AT3G44730 40.000 360 192 5 307 660 367 708 7.01e-77 266
MS.gene40143.t1 AT3G44730 40.000 360 192 5 307 660 367 708 7.01e-77 266
MS.gene40143.t1 AT3G44730 40.000 360 192 5 307 660 412 753 1.06e-76 266
MS.gene40143.t1 AT3G44730 40.000 360 192 5 307 660 412 753 1.06e-76 266
MS.gene40143.t1 AT1G55550 37.859 383 208 5 283 660 57 414 1.90e-75 259
MS.gene40143.t1 AT3G10310 40.000 405 208 11 270 660 309 692 7.00e-75 259
MS.gene40143.t1 AT3G10310 40.000 405 208 11 270 660 309 692 7.17e-75 259
MS.gene40143.t1 AT5G27950 37.203 379 215 7 283 657 45 404 5.70e-68 234
MS.gene40143.t1 AT1G09170 35.597 427 217 9 243 664 358 731 4.38e-66 235
MS.gene40143.t1 AT1G09170 36.788 386 220 8 243 622 358 725 1.97e-64 227
MS.gene40143.t1 AT1G09170 36.788 386 220 8 243 622 358 725 1.97e-64 227
MS.gene40143.t1 AT3G45850 38.310 355 195 9 317 658 55 398 1.68e-57 211
MS.gene40143.t1 AT3G45850 38.310 355 195 9 317 658 55 398 1.68e-57 211
MS.gene40143.t1 AT2G37420 37.006 354 201 8 317 658 48 391 2.45e-56 207
MS.gene40143.t1 AT2G37420 37.006 354 201 8 317 658 48 391 2.45e-56 207
MS.gene40143.t1 AT2G28620 37.360 356 197 9 317 658 50 393 1.06e-55 205
MS.gene40143.t1 AT2G28620 37.360 356 197 9 317 658 50 393 1.06e-55 205
MS.gene40143.t1 AT2G28620 37.360 356 197 9 317 658 50 393 1.10e-55 205
MS.gene40143.t1 AT2G36200 38.333 360 193 10 317 658 12 360 1.22e-55 205
MS.gene40143.t1 AT2G36200 38.333 360 193 10 317 658 12 360 2.58e-55 204
MS.gene40143.t1 AT3G44050 39.247 372 163 13 317 658 93 431 1.89e-52 196
MS.gene40143.t1 AT3G19050 36.927 371 173 12 317 658 193 531 9.26e-52 194
MS.gene40143.t1 AT4G14150 38.199 322 157 8 361 658 124 427 1.34e-50 191
MS.gene40143.t1 AT3G23670 35.068 365 184 9 318 658 97 432 1.14e-49 187
MS.gene40143.t1 AT3G23670 35.068 365 184 9 318 658 97 432 1.42e-49 187
MS.gene40143.t1 AT3G17360 35.422 367 184 9 317 658 168 506 9.13e-49 185
MS.gene40143.t1 AT3G17360 35.422 367 184 9 317 658 168 506 1.10e-48 185
MS.gene40143.t1 AT3G17360 35.422 367 184 9 317 658 168 506 1.17e-48 185
MS.gene40143.t1 AT3G50240 34.511 368 202 10 318 658 26 381 4.75e-48 182
MS.gene40143.t1 AT3G50240 34.511 368 202 10 318 658 26 381 7.26e-48 182
MS.gene40143.t1 AT3G50240 34.511 368 202 10 318 658 26 381 7.32e-48 182
MS.gene40143.t1 AT5G65460 30.022 453 270 10 210 654 36 449 3.56e-47 180
MS.gene40143.t1 AT5G65460 30.254 433 257 9 229 653 53 448 4.47e-47 180
MS.gene40143.t1 AT5G65460 30.022 453 270 10 210 654 36 449 4.75e-47 180
MS.gene40143.t1 AT3G10180 34.857 350 186 7 318 654 4 324 6.05e-47 179
MS.gene40143.t1 AT5G65460 30.088 452 269 10 210 653 36 448 6.12e-47 179
MS.gene40143.t1 AT5G60930 37.618 319 174 10 363 658 45 361 6.29e-47 179
MS.gene40143.t1 AT3G10180 34.857 350 186 7 318 654 4 324 6.44e-47 179
MS.gene40143.t1 AT5G60930 37.618 319 174 10 363 658 45 361 7.50e-47 179
MS.gene40143.t1 AT5G60930 37.618 319 174 10 363 658 45 361 8.53e-47 179
MS.gene40143.t1 AT2G21380 36.490 359 187 14 310 659 97 423 9.94e-46 176
MS.gene40143.t1 AT2G21380 36.490 359 187 14 310 659 97 423 9.94e-46 176
MS.gene40143.t1 AT4G39050 35.792 366 198 13 301 659 82 417 1.18e-45 175
MS.gene40143.t1 AT5G65460 29.540 457 274 10 210 654 36 456 1.85e-45 175
MS.gene40143.t1 AT1G59540 36.000 300 165 7 365 657 46 325 7.50e-45 172
MS.gene40143.t1 AT5G47820 33.155 374 205 10 317 658 11 371 8.02e-45 173
MS.gene40143.t1 AT5G47820 33.155 374 205 10 317 658 11 371 8.02e-45 173
MS.gene40143.t1 AT3G49650 35.691 311 177 5 355 661 58 349 5.93e-43 166
MS.gene40143.t1 AT1G18550 33.760 391 212 12 283 658 124 482 6.29e-43 166
MS.gene40143.t1 AT1G21730 35.876 354 190 12 314 659 72 396 1.35e-42 166
MS.gene40143.t1 AT5G10470 29.929 421 252 9 247 653 61 452 1.63e-42 166
MS.gene40143.t1 AT5G10470 29.858 422 253 9 247 654 61 453 1.74e-42 166
MS.gene40143.t1 AT5G06670 33.521 355 201 12 312 659 61 387 9.42e-42 163
MS.gene40143.t1 AT5G06670 33.521 355 201 12 312 659 61 387 9.42e-42 163
MS.gene40143.t1 AT5G06670 33.521 355 201 12 312 659 61 387 1.41e-41 162
MS.gene40143.t1 AT5G06670 33.521 355 201 12 312 659 61 387 1.74e-41 161
MS.gene40143.t1 AT5G06670 33.521 355 201 12 312 659 61 387 1.74e-41 161
MS.gene40143.t1 AT5G06670 33.521 355 201 12 312 659 61 387 1.74e-41 161
MS.gene40143.t1 AT3G63480 32.961 358 199 11 317 658 3 335 6.56e-41 155
MS.gene40143.t1 AT3G54870 32.628 331 180 9 351 659 138 447 1.37e-40 160
MS.gene40143.t1 AT3G54870 32.628 331 180 9 351 659 138 447 1.45e-40 159
MS.gene40143.t1 AT3G54870 32.628 331 180 9 351 659 138 447 1.64e-40 160
MS.gene40143.t1 AT5G06670 32.967 364 200 13 312 659 61 396 3.21e-40 159
MS.gene40143.t1 AT5G06670 32.967 364 200 13 312 659 61 396 3.21e-40 159
MS.gene40143.t1 AT3G12020 33.518 361 203 11 307 659 59 390 6.77e-40 157
MS.gene40143.t1 AT3G12020 33.518 361 203 11 307 659 59 390 6.77e-40 157
MS.gene40143.t1 AT3G63480 33.056 360 200 11 317 658 3 339 1.04e-39 152
MS.gene40143.t1 AT3G12020 33.518 361 203 11 307 659 59 390 1.23e-39 157
MS.gene40143.t1 AT3G12020 33.518 361 203 11 307 659 59 390 1.23e-39 157
MS.gene40143.t1 AT1G12430 31.452 372 201 12 318 659 71 418 3.17e-39 155
MS.gene40143.t1 AT1G12430 31.452 372 201 12 318 659 71 418 3.34e-39 155
MS.gene40143.t1 AT1G18370 33.987 306 171 6 363 662 78 358 6.09e-39 155
MS.gene40143.t1 AT3G50240 37.234 282 147 7 402 658 3 279 3.23e-38 152
MS.gene40143.t1 AT5G02370 31.322 348 197 9 317 653 20 336 1.16e-37 148
MS.gene40143.t1 AT3G51150 32.493 357 181 11 318 652 18 336 1.03e-36 148
MS.gene40143.t1 AT3G51150 32.493 357 181 11 318 652 18 336 1.03e-36 148
MS.gene40143.t1 AT3G51150 32.493 357 181 11 318 652 18 336 1.03e-36 148
MS.gene40143.t1 AT4G38950 32.087 321 176 7 353 657 50 344 1.07e-36 147
MS.gene40143.t1 AT4G38950 32.087 321 176 7 353 657 50 344 1.07e-36 147
MS.gene40143.t1 AT4G38950 32.087 321 176 7 353 657 50 344 1.07e-36 147
MS.gene40143.t1 AT4G38950 32.087 321 176 7 353 657 50 344 1.07e-36 147
MS.gene40143.t1 AT4G38950 32.087 321 176 7 353 657 50 344 1.07e-36 147
MS.gene40143.t1 AT3G51150 32.493 357 181 11 318 652 18 336 1.11e-36 148
MS.gene40143.t1 AT3G43210 37.288 295 153 8 363 651 74 342 1.63e-36 147
MS.gene40143.t1 AT3G43210 37.288 295 153 8 363 651 74 342 1.63e-36 147
MS.gene40143.t1 AT3G43210 37.288 295 153 8 363 651 74 342 1.63e-36 147
MS.gene40143.t1 AT3G43210 37.288 295 153 8 363 651 74 342 1.63e-36 147
MS.gene40143.t1 AT3G43210 37.288 295 153 8 363 651 74 342 1.63e-36 147
MS.gene40143.t1 AT1G01950 30.541 370 209 11 314 658 57 403 2.76e-36 146
MS.gene40143.t1 AT1G01950 30.541 370 209 11 314 658 57 403 3.35e-36 146
MS.gene40143.t1 AT1G01950 30.541 370 209 11 314 658 57 403 3.62e-36 146
MS.gene40143.t1 AT5G66310 34.783 299 158 6 363 652 67 337 2.15e-35 144
MS.gene40143.t1 AT5G66310 34.783 299 158 6 363 652 67 337 2.15e-35 144
MS.gene40143.t1 AT5G66310 34.783 299 158 6 363 652 67 337 2.15e-35 144
MS.gene40143.t1 AT4G14330 34.641 306 172 10 363 662 89 372 2.93e-35 143
MS.gene40143.t1 AT4G24170 33.762 311 160 10 356 652 43 321 1.00e-34 142
MS.gene40143.t1 AT4G24170 33.762 311 160 10 356 652 43 321 1.00e-34 142
MS.gene40143.t1 AT3G16060 31.534 352 206 9 318 660 170 495 1.07e-34 140
MS.gene40143.t1 AT3G20150 33.333 318 172 10 363 657 136 436 2.58e-34 140
MS.gene40143.t1 AT5G27950 35.887 248 148 4 411 657 1 238 2.63e-34 137
MS.gene40143.t1 AT3G20150 33.333 318 172 10 363 657 136 436 2.83e-34 140
MS.gene40143.t1 AT2G21300 30.623 369 211 12 297 651 3 340 3.22e-34 140
MS.gene40143.t1 AT2G21300 30.623 369 211 12 297 651 3 340 3.22e-34 140
MS.gene40143.t1 AT2G21300 30.623 369 211 12 297 651 3 340 3.22e-34 140
MS.gene40143.t1 AT2G21300 30.623 369 211 12 297 651 3 340 3.22e-34 140
MS.gene40143.t1 AT2G21300 30.623 369 211 12 297 651 3 340 3.22e-34 140
MS.gene40143.t1 AT1G59540 35.573 253 137 6 411 657 1 233 2.11e-32 134
MS.gene40143.t1 AT3G16630 29.917 361 204 10 318 657 194 526 1.28e-29 125
MS.gene40143.t1 AT3G16630 29.917 361 204 10 318 657 194 526 1.28e-29 125
MS.gene40143.t1 AT1G01950 31.206 282 153 7 398 658 1 262 7.77e-26 113
MS.gene40143.t1 AT5G42490 32.922 243 132 5 363 600 56 272 1.65e-22 103
MS.gene40143.t1 AT5G42490 32.922 243 132 5 363 600 56 272 1.66e-22 103
MS.gene40143.t1 AT3G51150 42.553 141 67 3 522 652 47 183 1.13e-20 97.8
MS.gene40143.t1 AT5G23910 29.180 305 175 13 355 654 47 315 9.43e-20 94.4
MS.gene40143.t1 AT5G23910 29.180 305 175 13 355 654 51 319 9.49e-20 94.4
MS.gene40143.t1 AT5G65460 30.476 210 124 3 445 653 14 202 1.10e-19 94.7
MS.gene40143.t1 AT1G20060 29.450 309 181 10 365 659 165 450 3.89e-17 86.3
MS.gene40143.t1 AT1G20060 29.450 309 181 10 365 659 165 450 3.89e-17 86.3
MS.gene40143.t1 AT1G20060 29.450 309 181 10 365 659 165 450 3.92e-17 86.3
MS.gene40143.t1 AT1G20060 29.450 309 181 10 365 659 165 450 4.03e-17 86.3
MS.gene40143.t1 AT1G20060 29.450 309 181 10 365 659 165 450 4.09e-17 86.3
MS.gene40143.t1 AT1G20060 29.450 309 181 10 365 659 165 450 4.24e-17 86.3
MS.gene40143.t1 AT1G20060 29.450 309 181 10 365 659 165 450 4.29e-17 86.3
MS.gene40143.t1 AT1G20060 29.450 309 181 10 365 659 165 450 4.39e-17 86.3
MS.gene40143.t1 AT1G20060 29.450 309 181 10 365 659 165 450 4.55e-17 86.3
MS.gene40143.t1 AT1G20060 31.651 218 118 9 365 574 165 359 6.93e-13 72.8

Find 122 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAAGAGCATGTTCCTTTC+AGG 0.194253 4.3:-22032379 MS.gene40143:CDS
ATACTCAAAATTGGATAAAT+TGG 0.218313 4.3:-22035216 MS.gene40143:CDS
TAGAGTCAATGCTGTGAAAT+TGG 0.225841 4.3:-22031706 MS.gene40143:CDS
AAATGGAAACACACATGTTT+TGG 0.247585 4.3:-22033210 MS.gene40143:CDS
AAACACAATAATACCTGATT+TGG 0.252458 4.3:+22033126 None:intergenic
GTTGACAAACATCAAAGTTT+TGG 0.254499 4.3:+22031785 None:intergenic
TAAGATCTCTTGTATCATTA+AGG 0.268393 4.3:+22035802 None:intergenic
ATATGAAACATACTCAAAAT+TGG 0.276205 4.3:-22035225 MS.gene40143:CDS
GCTTAATGAGAAGATGAAAA+AGG 0.279628 4.3:-22036943 MS.gene40143:CDS
ACCTGATTTGGGCAGCCTTT+TGG 0.295707 4.3:+22033138 None:intergenic
TGACAATAACAAATCTTTGA+TGG 0.318383 4.3:+22033310 None:intergenic
GCTTATGGACAAACAGGTTC+AGG 0.319847 4.3:-22033572 MS.gene40143:CDS
CTGCACCAGTTGTGATATTT+CGG 0.332276 4.3:+22034263 None:intergenic
AAAGGAGAAAATAAATATAC+TGG 0.354702 4.3:-22035050 MS.gene40143:CDS
AGAGTCAATGCTGTGAAATT+GGG 0.355203 4.3:-22031705 MS.gene40143:CDS
CACTTCCAGCCAAATCAATC+AGG 0.357452 4.3:+22032608 None:intergenic
CGAGCAGAAAATAGTGTTCA+TGG 0.366475 4.3:-22033260 MS.gene40143:CDS
GAGCAATGTCATATTTGCTT+TGG 0.367142 4.3:-22032408 MS.gene40143:CDS
GGCATTGAGTTGGAACAAAA+TGG 0.370931 4.3:-22034465 MS.gene40143:intron
TGTCTTAAACCTGATTGATT+TGG 0.373703 4.3:-22032617 MS.gene40143:CDS
ATGAAGCGTTTCAATCTTGT+TGG 0.379069 4.3:+22036425 None:intergenic
AAAGAATTTCAAGTAGTTGA+AGG 0.379952 4.3:-22034725 MS.gene40143:CDS
TTGTTCACCATTGCAGTTAA+CGG 0.384857 4.3:+22037038 None:intergenic
TCCAAAAGGCTGCCCAAATC+AGG 0.391053 4.3:-22033139 MS.gene40143:intron
AAGATTTGTTATTGTCAAAT+CGG 0.396139 4.3:-22033304 MS.gene40143:CDS
CTCTTGTGTCTTCAGGTCAA+TGG 0.401417 4.3:-22032816 MS.gene40143:intron
TGATACAAGAGATCTTAATA+AGG 0.404932 4.3:-22035796 MS.gene40143:CDS
AGATCTTAATAAGGAATTGC+AGG 0.409956 4.3:-22035787 MS.gene40143:CDS
GGCTTAAGCTTTGTGTTCAA+TGG 0.411472 4.3:-22036452 MS.gene40143:CDS
GTTAAGAAGTGTTCTGATAC+TGG 0.413284 4.3:-22036384 MS.gene40143:intron
CAGGCCTACCCATCATTGTA+TGG 0.417511 4.3:+22033543 None:intergenic
CTTTCAAGGAGTGGGGCCAC+TGG 0.419503 4.3:-22032580 MS.gene40143:CDS
GGTATCATCCCTTTGAGATC+TGG 0.431597 4.3:+22033515 None:intergenic
ATGGAGAGACAAAGAGTGTC+TGG 0.432987 4.3:-22037080 MS.gene40143:CDS
CCTTTGAGATCTGGAGAGTC+AGG 0.439610 4.3:+22033524 None:intergenic
GGCCACTGGGGAACGTTTGA+AGG 0.442182 4.3:-22032566 MS.gene40143:CDS
AAATATGACATTGCTCAAAC+AGG 0.446159 4.3:+22032415 None:intergenic
TTTCAAGGAGTGGGGCCACT+GGG 0.447460 4.3:-22032579 MS.gene40143:CDS
AACACAATAATACCTGATTT+GGG 0.450436 4.3:+22033127 None:intergenic
TGCTCAAACAGGAGAGACTT+TGG 0.452914 4.3:+22032426 None:intergenic
GATGGCTGATTTATCTGCTA+TGG 0.457746 4.3:-22034813 MS.gene40143:CDS
AAATGATGTCATGTTAGAAC+GGG 0.458801 4.3:-22035267 MS.gene40143:CDS
CTGGAAGTGAAAGACTTTCA+AGG 0.460124 4.3:-22032594 MS.gene40143:CDS
AGAAGAGCATGTTCCTTTCA+GGG 0.462036 4.3:-22032378 MS.gene40143:CDS
TCTTGTGTCTTCAGGTCAAT+GGG 0.464776 4.3:-22032815 MS.gene40143:intron
GTCGTTACTTTGCGCATATG+TGG 0.465467 4.3:-22032752 MS.gene40143:CDS
TTTCACCGAAATATCACAAC+TGG 0.467691 4.3:-22034268 MS.gene40143:CDS
GTCAATAGAAATGCTTGGCC+GGG 0.470648 4.3:-22034487 MS.gene40143:CDS
AGACAAACCTTATTATCAAA+AGG 0.474999 4.3:+22036915 None:intergenic
CGTCAATAGAAATGCTTGGC+CGG 0.476762 4.3:-22034488 MS.gene40143:CDS
TGCTGAAAGGGAGAAGTTAG+AGG 0.476851 4.3:-22035014 MS.gene40143:intron
AAAACTTACACACCTACTTC+AGG 0.477645 4.3:-22032351 MS.gene40143:intron
GGAGACTTGTTCCTCTCAAA+AGG 0.477958 4.3:-22035068 MS.gene40143:CDS
TGGCTTCTCGGAATCAGAAC+CGG 0.478047 4.3:-22037238 MS.gene40143:CDS
GAATTACCTTGTAGCCATCA+AGG 0.484630 4.3:+22034235 None:intergenic
TTAAACCTGATTGATTTGGC+TGG 0.484981 4.3:-22032613 MS.gene40143:CDS
TCGTAAACTACAAGATCAAT+TGG 0.486302 4.3:-22034753 MS.gene40143:CDS
ATATTACTAGGCATCAGTAT+TGG 0.491971 4.3:-22033348 MS.gene40143:intron
GGATTGCAGCCATGTCTTGA+AGG 0.492427 4.3:-22031813 MS.gene40143:intron
CTTTAAGAGACTGACTGGTC+TGG 0.494270 4.3:+22033471 None:intergenic
CTGGTGCAGAGTGCCCTTGA+TGG 0.494301 4.3:-22034249 MS.gene40143:CDS
GCAAAAGTTACATGCTGAAA+GGG 0.498320 4.3:-22035026 MS.gene40143:CDS
GCTTGGCCGGGGCATTGAGT+TGG 0.504578 4.3:-22034475 MS.gene40143:CDS
AGTCTCTTAAAGACCAGGGC+TGG 0.508242 4.3:-22033460 MS.gene40143:CDS
GTGAAAGACTTTCAAGGAGT+GGG 0.510340 4.3:-22032588 MS.gene40143:CDS
TCGTCAATTGAAGATTGATC+AGG 0.511344 4.3:+22031756 None:intergenic
GTTCACAAAAGATGATATAG+AGG 0.518156 4.3:-22036970 MS.gene40143:CDS
AAAACTGCACAACACTGTCT+TGG 0.526321 4.3:-22034687 MS.gene40143:intron
GATTTCCTCCCTCCTCCAAA+AGG 0.527021 4.3:-22033153 MS.gene40143:CDS
TTGGAATCCCCTTCAAGACA+TGG 0.527970 4.3:+22031804 None:intergenic
CTGACTCTCCAGATCTCAAA+GGG 0.533076 4.3:-22033523 MS.gene40143:CDS
AAAGGTTGGATCTGAAGAGA+TGG 0.533214 4.3:-22037099 MS.gene40143:intron
CAGTCAGTCTCTTAAAGACC+AGG 0.538247 4.3:-22033465 MS.gene40143:CDS
AATATCTGTTCTAAAGAAAG+TGG 0.538396 4.3:+22033494 None:intergenic
GATTGCAGCCATGTCTTGAA+GGG 0.543595 4.3:-22031812 MS.gene40143:intron
TAAATGATGTCATGTTAGAA+CGG 0.544042 4.3:-22035268 MS.gene40143:CDS
TCTGAACGGTCTCGTAGTAA+AGG 0.547365 4.3:+22034537 None:intergenic
AGGCCTACCCATCATTGTAT+GGG 0.548855 4.3:+22033544 None:intergenic
GAGTGCCCTTGATGGCTACA+AGG 0.550430 4.3:-22034241 MS.gene40143:intron
TAAACATTGAGTGGATGTCT+AGG 0.556673 4.3:+22031666 None:intergenic
CGCTACTGCAAGTAATGTAG+AGG 0.557272 4.3:-22037015 MS.gene40143:CDS
AGCAAAAGTTACATGCTGAA+AGG 0.557415 4.3:-22035027 MS.gene40143:CDS
TTTGTTCCAACTCAATGCCC+CGG 0.558295 4.3:+22034469 None:intergenic
CTGGTCTTTAAGAGACTGAC+TGG 0.561616 4.3:+22033466 None:intergenic
GGGCTGGAATTACAAAATGC+AGG 0.564720 4.3:-22033444 MS.gene40143:intron
CCAAGATTCTAAACATTGAG+TGG 0.566179 4.3:+22031657 None:intergenic
CAAGCATTTCTATTGACGTA+GGG 0.573774 4.3:+22034493 None:intergenic
AAGTAAAACAGAGGCACTTG+AGG 0.575761 4.3:-22035192 MS.gene40143:intron
ATAAATGACTTACATTGGAG+TGG 0.577293 4.3:+22037204 None:intergenic
TAGTTGAAGGAGAAAAGCTA+AGG 0.579762 4.3:-22034712 MS.gene40143:CDS
GAGATCTGATTGAAGCTCCT+CGG 0.580804 4.3:+22035884 None:intergenic
GATGATCGTGATCGCCTACA+AGG 0.581309 4.3:-22035296 MS.gene40143:CDS
GAGTCAATGCTGTGAAATTG+GGG 0.581648 4.3:-22031704 MS.gene40143:CDS
CCTACGTCAATAGAAATGCT+TGG 0.587483 4.3:-22034492 MS.gene40143:CDS
TCAATAGAAATGCTTGGCCG+GGG 0.588845 4.3:-22034486 MS.gene40143:CDS
CCAAGCATTTCTATTGACGT+AGG 0.594729 4.3:+22034492 None:intergenic
TAGAGCGCCGTTAACTGCAA+TGG 0.596034 4.3:-22037045 MS.gene40143:CDS
CCTGACTCTCCAGATCTCAA+AGG 0.596635 4.3:-22033524 MS.gene40143:CDS
AATTACCTTGTAGCCATCAA+GGG 0.603883 4.3:+22034236 None:intergenic
AGTGAAAGACTTTCAAGGAG+TGG 0.608249 4.3:-22032589 MS.gene40143:CDS
AACACTGAACAACAAGTACA+AGG 0.609494 4.3:-22032640 MS.gene40143:CDS
TGCGCAAAGTAACGACAAAG+TGG 0.612147 4.3:+22032759 None:intergenic
TATTGTCAAATCGGTCAAGT+GGG 0.612810 4.3:-22033295 MS.gene40143:CDS
TTATTGTCAAATCGGTCAAG+TGG 0.613155 4.3:-22033296 MS.gene40143:CDS
AAACCCATACAATGATGGGT+AGG 0.615951 4.3:-22033547 MS.gene40143:CDS
ATTGCAGCCATGTCTTGAAG+GGG 0.623975 4.3:-22031811 MS.gene40143:intron
GGAACGTTTGAAGGAAACTC+AGG 0.625035 4.3:-22032557 MS.gene40143:intron
TTCCTTCAAACGTTCCCCAG+TGG 0.633447 4.3:+22032564 None:intergenic
CAACCGTCTTCGTTTCTGAA+CGG 0.634819 4.3:+22034523 None:intergenic
GAGGAGGGAGGAAATCTCAT+CGG 0.641873 4.3:+22033160 None:intergenic
TGAAAGACTTTCAAGGAGTG+GGG 0.656119 4.3:-22032587 MS.gene40143:CDS
TAAATTGGCAAGTAAAACAG+AGG 0.665756 4.3:-22035201 MS.gene40143:CDS
GGTGAAAACGTCATGCTGAG+AGG 0.665998 4.3:+22034284 None:intergenic
GGCACTACAAACATCGACAA+TGG 0.670045 4.3:+22033181 None:intergenic
AGATGGTGGATCTTATTAAG+CGG 0.670837 4.3:-22036473 MS.gene40143:CDS
GCTACTGCAAGTAATGTAGA+GGG 0.672984 4.3:-22037014 MS.gene40143:CDS
TACAAACATCGACAATGGTG+AGG 0.674542 4.3:+22033186 None:intergenic
AGATCTCAATTCAGCTAACG+AGG 0.675031 4.3:-22035868 MS.gene40143:CDS
TTCAAGGAGTGGGGCCACTG+GGG 0.688770 4.3:-22032578 MS.gene40143:CDS
AGACCGTTCAGAAACGAAGA+CGG 0.700730 4.3:-22034526 MS.gene40143:CDS
AGTCAGTCTCTTAAAGACCA+GGG 0.703830 4.3:-22033464 MS.gene40143:CDS
GCGCATATGTGGTATAAACG+AGG 0.734281 4.3:-22032741 MS.gene40143:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAAAAAAAAAATCATAT+TGG + chr4.3:22033173-22033192 None:intergenic 10.0%
!! TATTATCATTTAATTACTTT+AGG - chr4.3:22034879-22034898 MS.gene40143:intron 10.0%
!!! GATTTTTATTTTACTTTTTT+TGG - chr4.3:22036807-22036826 MS.gene40143:intron 10.0%
!!! TTATGAGAAATTTTTAATAA+TGG + chr4.3:22033958-22033977 None:intergenic 10.0%
!! AAATGATAAAATGTTTATGA+TGG - chr4.3:22033980-22033999 MS.gene40143:intron 15.0%
!! ATCAATAATGCAAAATTATA+TGG + chr4.3:22036590-22036609 None:intergenic 15.0%
!! ATTATATTTATCACAAAAGA+CGG + chr4.3:22032559-22032578 None:intergenic 15.0%
!! GCATTATGAAATAAATAATA+AGG + chr4.3:22036225-22036244 None:intergenic 15.0%
!! TCAATAATGCAAAATTATAT+GGG + chr4.3:22036589-22036608 None:intergenic 15.0%
!!! AAAAGCAAAATAAAGATTTT+TGG + chr4.3:22032888-22032907 None:intergenic 15.0%
!!! ATTTTCATATTCATATTACT+AGG - chr4.3:22035544-22035563 MS.gene40143:intron 15.0%
!!! GCTAAATTATTTTTATTTCT+AGG - chr4.3:22034306-22034325 MS.gene40143:CDS 15.0%
!!! GGGTTTTATTATATTTAATA+TGG - chr4.3:22033923-22033942 MS.gene40143:intron 15.0%
!!! TAATTTTTTTTAGTTCTTCT+CGG + chr4.3:22033586-22033605 None:intergenic 15.0%
!!! TCAAATATTTTATCTTTAAG+CGG - chr4.3:22032181-22032200 MS.gene40143:intron 15.0%
!!! TCTTTTAATGTTATAAAAGT+AGG - chr4.3:22032335-22032354 MS.gene40143:intron 15.0%
!! AAAGGAGAAAATAAATATAC+TGG - chr4.3:22033854-22033873 MS.gene40143:intron 20.0%
!! ACTCAAAATAAATACTTTCA+GGG + chr4.3:22032925-22032944 None:intergenic 20.0%
!! ATACTCAAAATTGGATAAAT+TGG - chr4.3:22033688-22033707 MS.gene40143:intron 20.0%
!! ATATGAAACATACTCAAAAT+TGG - chr4.3:22033679-22033698 MS.gene40143:intron 20.0%
!! ATTGGATTCTAATATACTTA+TGG - chr4.3:22036733-22036752 MS.gene40143:intron 20.0%
!! ATTTGATAAATGACTTACAT+TGG + chr4.3:22031708-22031727 None:intergenic 20.0%
!! CATATAAAGAAAACATTTAC+AGG + chr4.3:22035819-22035838 None:intergenic 20.0%
!! CCATAACATATTTATATTGT+CGG - chr4.3:22037070-22037089 MS.gene40143:CDS 20.0%
!! CGACAATATAAATATGTTAT+GGG + chr4.3:22037072-22037091 None:intergenic 20.0%
!! GTAATATGAATATGAAAATC+AGG + chr4.3:22035543-22035562 None:intergenic 20.0%
!! GTGATAAATATAATTGTGTT+GGG - chr4.3:22032565-22032584 MS.gene40143:CDS 20.0%
!! TAAATAAACGATCTTAACAT+AGG + chr4.3:22033761-22033780 None:intergenic 20.0%
!! TACTCAAAATAAATACTTTC+AGG + chr4.3:22032926-22032945 None:intergenic 20.0%
!! TGTGATAAATATAATTGTGT+TGG - chr4.3:22032564-22032583 MS.gene40143:CDS 20.0%
!! TTGGATTCTAATATACTTAT+GGG - chr4.3:22036734-22036753 MS.gene40143:intron 20.0%
!!! AAGATTTGTTATTGTCAAAT+CGG - chr4.3:22035600-22035619 MS.gene40143:intron 20.0%
!!! AAGTAGTTTGCTTATATAAT+AGG - chr4.3:22032761-22032780 MS.gene40143:CDS 20.0%
!!! ACAATTAAAAGCATCAATTA+AGG - chr4.3:22036776-22036795 MS.gene40143:intron 20.0%
!!! ACTAACTTATATTTTCTTTC+TGG - chr4.3:22034056-22034075 MS.gene40143:intron 20.0%
!!! CTAACTTATATTTTCTTTCT+GGG - chr4.3:22034057-22034076 MS.gene40143:intron 20.0%
!!! CTGTAAATGTTTTCTTTATA+TGG - chr4.3:22035817-22035836 MS.gene40143:CDS 20.0%
!!! TAACTTATATTTTCTTTCTG+GGG - chr4.3:22034058-22034077 MS.gene40143:intron 20.0%
!!! TATCTTACTCAATTTTTCAA+GGG - chr4.3:22032012-22032031 MS.gene40143:intron 20.0%
!!! TGAAAGTATTTATTTTGAGT+AGG - chr4.3:22032925-22032944 MS.gene40143:intron 20.0%
!!! TGGAAATAGTATTTTCAATA+CGG + chr4.3:22035896-22035915 None:intergenic 20.0%
!!! TTATCTTACTCAATTTTTCA+AGG - chr4.3:22032011-22032030 MS.gene40143:intron 20.0%
!!! TTCTTATGATTTCTGAAAAA+AGG - chr4.3:22031787-22031806 MS.gene40143:CDS 20.0%
!!! TTGATTTGTTGTTTTGTTTT+GGG - chr4.3:22035257-22035276 MS.gene40143:CDS 20.0%
! AAACACAATAATACCTGATT+TGG + chr4.3:22035781-22035800 None:intergenic 25.0%
! AACACAATAATACCTGATTT+GGG + chr4.3:22035780-22035799 None:intergenic 25.0%
! ACACTCAAAAAAAATTCTGT+AGG + chr4.3:22034749-22034768 None:intergenic 25.0%
! ACTATTAGACATGACAAAAA+TGG - chr4.3:22035677-22035696 MS.gene40143:intron 25.0%
! AGACAAACCTTATTATCAAA+AGG + chr4.3:22031992-22032011 None:intergenic 25.0%
! ATAAATTAATGATCTGGACA+TGG - chr4.3:22035281-22035300 MS.gene40143:CDS 25.0%
! ATTGATTGAATGTTTAACGT+TGG - chr4.3:22034826-22034845 MS.gene40143:intron 25.0%
! ATTGTAGATTGTGTTATGAT+TGG + chr4.3:22036970-22036989 None:intergenic 25.0%
! CCGACAATATAAATATGTTA+TGG + chr4.3:22037073-22037092 None:intergenic 25.0%
! CTAATCAGTCACAATATTTA+GGG + chr4.3:22032646-22032665 None:intergenic 25.0%
! CTTAATGAGAAGATGAAAAA+GGG - chr4.3:22031962-22031981 MS.gene40143:intron 25.0%
! GTTGTTTATGGAACTTATTT+GGG - chr4.3:22032359-22032378 MS.gene40143:CDS 25.0%
! TAAATGATGTCATGTTAGAA+CGG - chr4.3:22033636-22033655 MS.gene40143:intron 25.0%
! TAAGATCTCTTGTATCATTA+AGG + chr4.3:22033105-22033124 None:intergenic 25.0%
! TGACAATAACAAATCTTTGA+TGG + chr4.3:22035597-22035616 None:intergenic 25.0%
! TGATACAAGAGATCTTAATA+AGG - chr4.3:22033108-22033127 MS.gene40143:intron 25.0%
! TGGTTTCATTTATGAAACAT+AGG - chr4.3:22036047-22036066 MS.gene40143:intron 25.0%
! TTACTAGCAATTGTGAATTT+AGG - chr4.3:22032736-22032755 MS.gene40143:intron 25.0%
! TTCGTTAAAGAATGAATTGA+AGG - chr4.3:22033278-22033297 MS.gene40143:CDS 25.0%
! TTGATAAATTATGATGCGAA+AGG + chr4.3:22034705-22034724 None:intergenic 25.0%
! TTGGGTATAAATTAATGATC+TGG - chr4.3:22035275-22035294 MS.gene40143:CDS 25.0%
! TTTATATTTCCTATGAACCT+TGG - chr4.3:22035007-22035026 MS.gene40143:intron 25.0%
!! AAAGAATTTCAAGTAGTTGA+AGG - chr4.3:22034179-22034198 MS.gene40143:intron 25.0%
!! AATTAGGTTGTTTATCCAAT+CGG - chr4.3:22032300-22032319 MS.gene40143:intron 25.0%
!! ATATAAGTTAGTGTCAGTTT+TGG + chr4.3:22034048-22034067 None:intergenic 25.0%
!! GCATGATATTTTGTTCAAAT+AGG - chr4.3:22035029-22035048 MS.gene40143:CDS 25.0%
!! TATGATTTCTGAAAAAAGGT+TGG - chr4.3:22031791-22031810 MS.gene40143:CDS 25.0%
!! TCAAAAAGTGATAAGTTGAA+TGG + chr4.3:22035916-22035935 None:intergenic 25.0%
!! TCACAAACATTTTCATGATT+TGG + chr4.3:22033235-22033254 None:intergenic 25.0%
!! TGATATTTTGTTCAAATAGG+AGG - chr4.3:22035032-22035051 MS.gene40143:CDS 25.0%
!! TGTTGTTTATGGAACTTATT+TGG - chr4.3:22032358-22032377 MS.gene40143:CDS 25.0%
!! TTTTCATTGTTGTCATATTC+AGG - chr4.3:22036448-22036467 MS.gene40143:CDS 25.0%
!! TTTTGATACGCAGAAAAAAA+TGG - chr4.3:22032405-22032424 MS.gene40143:CDS 25.0%
!!! AATATCTGTTCTAAAGAAAG+TGG + chr4.3:22035413-22035432 None:intergenic 25.0%
!!! ATAAAAGTAGGTGTTGTTTA+TGG - chr4.3:22032347-22032366 MS.gene40143:intron 25.0%
!!! ATTTATTTTCTCCTTTTGAG+AGG + chr4.3:22033850-22033869 None:intergenic 25.0%
!!! GTTGATTTGTTGTTTTGTTT+TGG - chr4.3:22035256-22035275 MS.gene40143:CDS 25.0%
!!! TTGTGTACTTAAAGTATTGA+TGG + chr4.3:22034975-22034994 None:intergenic 25.0%
!!! TTTTGGAGAACTTTTGAAAA+CGG - chr4.3:22032085-22032104 MS.gene40143:intron 25.0%
AAATATGACATTGCTCAAAC+AGG + chr4.3:22036492-22036511 None:intergenic 30.0%
AAATGATGTCATGTTAGAAC+GGG - chr4.3:22033637-22033656 MS.gene40143:intron 30.0%
AAGTTAGAGGTAATGCAATT+GGG - chr4.3:22033903-22033922 MS.gene40143:intron 30.0%
AATCCTGAGATAAGAAGAAA+GGG + chr4.3:22033529-22033548 None:intergenic 30.0%
ACATTTACAGGATCCTAATA+TGG + chr4.3:22035807-22035826 None:intergenic 30.0%
AGATCTTAATAAGGAATTGC+AGG - chr4.3:22033117-22033136 MS.gene40143:intron 30.0%
AGCAGCAAAAAATTTCCAAT+AGG + chr4.3:22033259-22033278 None:intergenic 30.0%
AGCTGCAAATTAAGCTAATT+AGG - chr4.3:22032284-22032303 MS.gene40143:intron 30.0%
AGTAAGCCATGTCAATATAA+GGG + chr4.3:22035194-22035213 None:intergenic 30.0%
ATAAATGACTTACATTGGAG+TGG + chr4.3:22031703-22031722 None:intergenic 30.0%
ATAAATTATGATGCGAAAGG+AGG + chr4.3:22034702-22034721 None:intergenic 30.0%
ATATTACTAGGCATCAGTAT+TGG - chr4.3:22035556-22035575 MS.gene40143:intron 30.0%
ATCATCTCATGTTAGAACTT+AGG - chr4.3:22036937-22036956 MS.gene40143:CDS 30.0%
ATTGTACCCTTATATTGACA+TGG - chr4.3:22035185-22035204 MS.gene40143:intron 30.0%
CAAAATTCAAGTGCTTGAAA+AGG + chr4.3:22033379-22033398 None:intergenic 30.0%
CCTAAATATTGTGACTGATT+AGG - chr4.3:22032644-22032663 MS.gene40143:intron 30.0%
CCTAATCAGTCACAATATTT+AGG + chr4.3:22032647-22032666 None:intergenic 30.0%
CTTGCAACAAAAATATGGAA+AGG + chr4.3:22033480-22033499 None:intergenic 30.0%
GAAAATGTTTGTGAACCTAT+TGG - chr4.3:22033241-22033260 MS.gene40143:CDS 30.0%
GCAGTATCATTTCTTAAGAT+TGG - chr4.3:22036715-22036734 MS.gene40143:intron 30.0%
GCTTAATGAGAAGATGAAAA+AGG - chr4.3:22031961-22031980 MS.gene40143:intron 30.0%
GGTGTAAGAATAAACATTGT+GGG - chr4.3:22035838-22035857 MS.gene40143:CDS 30.0%
GTTCACAAAAGATGATATAG+AGG - chr4.3:22031934-22031953 MS.gene40143:intron 30.0%
TAAATTGGCAAGTAAAACAG+AGG - chr4.3:22033703-22033722 MS.gene40143:intron 30.0%
TAGTAAGCCATGTCAATATA+AGG + chr4.3:22035195-22035214 None:intergenic 30.0%
TATTGTGTTTGCTCCATATT+AGG - chr4.3:22035791-22035810 MS.gene40143:CDS 30.0%
TCGTAAACTACAAGATCAAT+TGG - chr4.3:22034151-22034170 MS.gene40143:intron 30.0%
TGAAACTCGTAAGAAACAAT+AGG + chr4.3:22034497-22034516 None:intergenic 30.0%
TGGTGTAAGAATAAACATTG+TGG - chr4.3:22035837-22035856 MS.gene40143:CDS 30.0%
TGTAACAAAACTTATCGTGA+AGG + chr4.3:22036195-22036214 None:intergenic 30.0%
TGTCTTAAACCTGATTGATT+TGG - chr4.3:22036287-22036306 MS.gene40143:intron 30.0%
TTGAACAAAATATCATGCCA+AGG + chr4.3:22035027-22035046 None:intergenic 30.0%
TTGCGAAGAGGAAATAATTA+AGG - chr4.3:22033419-22033438 MS.gene40143:intron 30.0%
TTTGTCCTGTAAAAATTAGC+AGG - chr4.3:22034553-22034572 MS.gene40143:CDS 30.0%
! AAAACGTAGGAGGTTTTTAA+AGG + chr4.3:22034940-22034959 None:intergenic 30.0%
! AAATGGAAACACACATGTTT+TGG - chr4.3:22035694-22035713 MS.gene40143:intron 30.0%
! ACAGCTTTTTACATTTGACA+AGG - chr4.3:22034582-22034601 MS.gene40143:intron 30.0%
! ATCTTTTGTGAACTCAATTG+CGG + chr4.3:22031927-22031946 None:intergenic 30.0%
! ATTAGGTTGTTTATCCAATC+GGG - chr4.3:22032301-22032320 MS.gene40143:intron 30.0%
! ATTTTTGCTTATGGACAAAC+AGG - chr4.3:22035326-22035345 MS.gene40143:CDS 30.0%
! GGTTTTTATATACCTGAAGT+AGG + chr4.3:22036568-22036587 None:intergenic 30.0%
! GTTGACAAACATCAAAGTTT+TGG + chr4.3:22037122-22037141 None:intergenic 30.0%
! TAGGTATGCATTTTTGCTTA+TGG - chr4.3:22035317-22035336 MS.gene40143:CDS 30.0%
!! ATTTCTAGCAAAAAGCTATG+CGG + chr4.3:22032159-22032178 None:intergenic 30.0%
!! TGTACTTAAAGTATTGATGG+TGG + chr4.3:22034972-22034991 None:intergenic 30.0%
!!! CATCATTTAGTTTTCCTTGT+AGG + chr4.3:22033625-22033644 None:intergenic 30.0%
!!! TTTTATTTCTAGGAGCTGAA+AGG - chr4.3:22034316-22034335 MS.gene40143:CDS 30.0%
AAAACTTACACACCTACTTC+AGG - chr4.3:22036553-22036572 MS.gene40143:intron 35.0%
AACACTGAACAACAAGTACA+AGG - chr4.3:22036264-22036283 MS.gene40143:intron 35.0%
AACGCAACACAAAAAATGAG+AGG + chr4.3:22033503-22033522 None:intergenic 35.0%
AATATCATGCCAAGGTTCAT+AGG + chr4.3:22035019-22035038 None:intergenic 35.0%
AATTACCTTGTAGCCATCAA+GGG + chr4.3:22034671-22034690 None:intergenic 35.0%
AATTCAAGTGCTTGAAAAGG+AGG + chr4.3:22033376-22033395 None:intergenic 35.0%
ACATGGCTGTTTATTATGCT+AGG - chr4.3:22035298-22035317 MS.gene40143:CDS 35.0%
ACTAGAGTCTACATATAGCT+TGG - chr4.3:22036024-22036043 MS.gene40143:intron 35.0%
AGAAAGTTGAATCATTCACC+AGG + chr4.3:22036414-22036433 None:intergenic 35.0%
AGAGGCTTGCAACAAAAATA+TGG + chr4.3:22033485-22033504 None:intergenic 35.0%
AGAGTCAATGCTGTGAAATT+GGG - chr4.3:22037199-22037218 MS.gene40143:intron 35.0%
AGCAAAAGTTACATGCTGAA+AGG - chr4.3:22033877-22033896 MS.gene40143:intron 35.0%
AGGAAAAACCCATACAATGA+TGG - chr4.3:22035352-22035371 MS.gene40143:CDS 35.0%
ATCAAGTCCATATTCTCTGA+AGG + chr4.3:22036916-22036935 None:intergenic 35.0%
ATGGAACTTATTTGGGTGTT+TGG - chr4.3:22032366-22032385 MS.gene40143:CDS 35.0%
CAAAGAATACGTGAAGGAAA+AGG + chr4.3:22035226-22035245 None:intergenic 35.0%
CAAGCATTTCTATTGACGTA+GGG + chr4.3:22034414-22034433 None:intergenic 35.0%
CAATAGTGTGTTTCCTTTAC+AGG - chr4.3:22033815-22033834 MS.gene40143:intron 35.0%
CCAAAAGACCAAAACTAATG+CGG - chr4.3:22032598-22032617 MS.gene40143:CDS 35.0%
CTAGTGACTGTGCAATAATT+TGG - chr4.3:22032804-22032823 MS.gene40143:CDS 35.0%
CTCGAATAAGTCAATCCAAA+CGG + chr4.3:22032039-22032058 None:intergenic 35.0%
GAAGTTAGAGGTAATGCAAT+TGG - chr4.3:22033902-22033921 MS.gene40143:intron 35.0%
GAATCCTGAGATAAGAAGAA+AGG + chr4.3:22033530-22033549 None:intergenic 35.0%
GAGCAATGTCATATTTGCTT+TGG - chr4.3:22036496-22036515 MS.gene40143:intron 35.0%
GATATCAACCACAAGAAAGT+TGG + chr4.3:22035077-22035096 None:intergenic 35.0%
GCAAAAGTTACATGCTGAAA+GGG - chr4.3:22033878-22033897 MS.gene40143:intron 35.0%
GGAAAAACCCATACAATGAT+GGG - chr4.3:22035353-22035372 MS.gene40143:CDS 35.0%
GTTGACATGTGTCACATAAA+TGG - chr4.3:22035509-22035528 MS.gene40143:intron 35.0%
TAAACATTGAGTGGATGTCT+AGG + chr4.3:22037241-22037260 None:intergenic 35.0%
TAAGTAACATTGTTGCGAAG+AGG - chr4.3:22033407-22033426 MS.gene40143:intron 35.0%
TAATACCTCCAACTTTCTTG+TGG - chr4.3:22035066-22035085 MS.gene40143:CDS 35.0%
TAGAGTCAATGCTGTGAAAT+TGG - chr4.3:22037198-22037217 MS.gene40143:intron 35.0%
TAGTTGAAGGAGAAAAGCTA+AGG - chr4.3:22034192-22034211 MS.gene40143:intron 35.0%
TATTGTCAAATCGGTCAAGT+GGG - chr4.3:22035609-22035628 MS.gene40143:intron 35.0%
TATTTATGATCTTGAGCTCC+TGG - chr4.3:22036393-22036412 MS.gene40143:CDS 35.0%
TCAAGTCCATATTCTCTGAA+GGG + chr4.3:22036915-22036934 None:intergenic 35.0%
TCGTCAATTGAAGATTGATC+AGG + chr4.3:22037151-22037170 None:intergenic 35.0%
TGAGATGAAAAATAAGACCG+AGG - chr4.3:22033003-22033022 MS.gene40143:intron 35.0%
TGGAATTACAAAATGCAGGT+TGG - chr4.3:22035464-22035483 MS.gene40143:intron 35.0%
TTATTGTCAAATCGGTCAAG+TGG - chr4.3:22035608-22035627 MS.gene40143:intron 35.0%
TTCTGCGTATCAAAAACATG+AGG + chr4.3:22032400-22032419 None:intergenic 35.0%
TTGTTCACCATTGCAGTTAA+CGG + chr4.3:22031869-22031888 None:intergenic 35.0%
TTTCACCGAAATATCACAAC+TGG - chr4.3:22034636-22034655 MS.gene40143:intron 35.0%
! ATGAAGCGTTTCAATCTTGT+TGG + chr4.3:22032482-22032501 None:intergenic 35.0%
! CAATATGCTCTTGTTGTACT+TGG - chr4.3:22035996-22036015 MS.gene40143:intron 35.0%
! CTTTCTTGTGGTTGATATCT+TGG - chr4.3:22035078-22035097 MS.gene40143:intron 35.0%
! CTTTTCCTTCACGTATTCTT+TGG - chr4.3:22035224-22035243 MS.gene40143:CDS 35.0%
! GAGTGACTTTCTTGTTTCAA+CGG + chr4.3:22036893-22036912 None:intergenic 35.0%
! TAAATATGTTATGGGAGCAC+TGG + chr4.3:22037064-22037083 None:intergenic 35.0%
! TCTGTCCTGCTAATTTTTAC+AGG + chr4.3:22034561-22034580 None:intergenic 35.0%
! TTAGGTTGTTTATCCAATCG+GGG - chr4.3:22032302-22032321 MS.gene40143:intron 35.0%
! TTTCTAGCAAAAAGCTATGC+GGG + chr4.3:22032158-22032177 None:intergenic 35.0%
!! AACACTGTCTTGGTAATGTT+TGG - chr4.3:22034227-22034246 MS.gene40143:intron 35.0%
!! AGATGGTGGATCTTATTAAG+CGG - chr4.3:22032431-22032450 MS.gene40143:CDS 35.0%
!! CTTGTTTCAACGGATTAAAG+CGG + chr4.3:22036883-22036902 None:intergenic 35.0%
!! GAACTTTTGAAAACGGCTTA+TGG - chr4.3:22032092-22032111 MS.gene40143:intron 35.0%
!! GGGAACTCCTTTTGATAATA+AGG - chr4.3:22031982-22032001 MS.gene40143:intron 35.0%
!! GTTAAGAAGTGTTCTGATAC+TGG - chr4.3:22032520-22032539 MS.gene40143:intron 35.0%
!! TTAAACCTGATTGATTTGGC+TGG - chr4.3:22036291-22036310 MS.gene40143:intron 35.0%
!!! GAGCTTTTTTAAAACGTAGG+AGG + chr4.3:22034950-22034969 None:intergenic 35.0%
!!! GTAAGTTTTGAATCCCTGAA+AGG + chr4.3:22036542-22036561 None:intergenic 35.0%
!!! GTGGAGCTTTTTTAAAACGT+AGG + chr4.3:22034953-22034972 None:intergenic 35.0%
AAAACTGCACAACACTGTCT+TGG - chr4.3:22034217-22034236 MS.gene40143:intron 40.0%
AAACAATAGGAGTGGAGTAG+CGG + chr4.3:22034484-22034503 None:intergenic 40.0%
AAAGGTTGGATCTGAAGAGA+TGG - chr4.3:22031805-22031824 MS.gene40143:CDS 40.0%
AGAAGCCAAAGAATACGTGA+AGG + chr4.3:22035232-22035251 None:intergenic 40.0%
AGAGTCTACATATAGCTTGG+TGG - chr4.3:22036027-22036046 MS.gene40143:intron 40.0%
AGATAGATTAAAGCCCCGAT+TGG + chr4.3:22032318-22032337 None:intergenic 40.0%
AGATCTCAATTCAGCTAACG+AGG - chr4.3:22033036-22033055 MS.gene40143:intron 40.0%
AGTCAGTCTCTTAAAGACCA+GGG - chr4.3:22035440-22035459 MS.gene40143:intron 40.0%
AGTGAAAGACTTTCAAGGAG+TGG - chr4.3:22036315-22036334 MS.gene40143:intron 40.0%
ATCAACCACAAGAAAGTTGG+AGG + chr4.3:22035074-22035093 None:intergenic 40.0%
ATGAATTGAAGGAGAGTAGC+TGG - chr4.3:22033289-22033308 MS.gene40143:CDS 40.0%
ATTGACCTGAAGACACAAGA+GGG + chr4.3:22036089-22036108 None:intergenic 40.0%
CCAAGCATTTCTATTGACGT+AGG + chr4.3:22034415-22034434 None:intergenic 40.0%
CCTACGTCAATAGAAATGCT+TGG - chr4.3:22034412-22034431 MS.gene40143:intron 40.0%
CGAGCAGAAAATAGTGTTCA+TGG - chr4.3:22035644-22035663 MS.gene40143:intron 40.0%
CTCGTAAGAAACAATAGGAG+TGG + chr4.3:22034492-22034511 None:intergenic 40.0%
CTGCACCAGTTGTGATATTT+CGG + chr4.3:22034644-22034663 None:intergenic 40.0%
CTGGAAGTGAAAGACTTTCA+AGG - chr4.3:22036310-22036329 MS.gene40143:intron 40.0%
GAAAAAAATGGAGCAGATGG+TGG - chr4.3:22032417-22032436 MS.gene40143:CDS 40.0%
GAATTACCTTGTAGCCATCA+AGG + chr4.3:22034672-22034691 None:intergenic 40.0%
GAGTCAATGCTGTGAAATTG+GGG - chr4.3:22037200-22037219 MS.gene40143:intron 40.0%
GATCCCTTTCTTCTTATCTC+AGG - chr4.3:22033523-22033542 MS.gene40143:CDS 40.0%
GCAGAAAAAAATGGAGCAGA+TGG - chr4.3:22032414-22032433 MS.gene40143:CDS 40.0%
GCTACTGCAAGTAATGTAGA+GGG - chr4.3:22031890-22031909 MS.gene40143:intron 40.0%
GTGAAAGACTTTCAAGGAGT+GGG - chr4.3:22036316-22036335 MS.gene40143:intron 40.0%
TACAAACATCGACAATGGTG+AGG + chr4.3:22035721-22035740 None:intergenic 40.0%
TCTTGTGTCTTCAGGTCAAT+GGG - chr4.3:22036089-22036108 MS.gene40143:intron 40.0%
TGAAAGACTTTCAAGGAGTG+GGG - chr4.3:22036317-22036336 MS.gene40143:intron 40.0%
TGAATTGAAGGAGAGTAGCT+GGG - chr4.3:22033290-22033309 MS.gene40143:CDS 40.0%
TGATATCTTGGATGTGTCTG+TGG - chr4.3:22035090-22035109 MS.gene40143:intron 40.0%
! AAAGGAGGAGGCTAATGTTT+TGG + chr4.3:22033361-22033380 None:intergenic 40.0%
! AAGAAGAGCATGTTCCTTTC+AGG - chr4.3:22036525-22036544 MS.gene40143:intron 40.0%
! AAGCACTTGTGAGACTGTTT+TGG - chr4.3:22032068-22032087 MS.gene40143:intron 40.0%
! AGAAGAGCATGTTCCTTTCA+GGG - chr4.3:22036526-22036545 MS.gene40143:intron 40.0%
! CACTATTTTCTGCTCGTGTT+TGG + chr4.3:22035640-22035659 None:intergenic 40.0%
! GATGGCTGATTTATCTGCTA+TGG - chr4.3:22034091-22034110 MS.gene40143:intron 40.0%
! GGCTTAAGCTTTGTGTTCAA+TGG - chr4.3:22032452-22032471 MS.gene40143:intron 40.0%
!! AAACCCATACAATGATGGGT+AGG - chr4.3:22035357-22035376 MS.gene40143:CDS 40.0%
!! AAGTAAAACAGAGGCACTTG+AGG - chr4.3:22033712-22033731 MS.gene40143:intron 40.0%
!! AAGTCTCTCCGCATTAGTTT+TGG + chr4.3:22032609-22032628 None:intergenic 40.0%
!! CTTACATTGGAGTGGTTTTG+AGG + chr4.3:22031695-22031714 None:intergenic 40.0%
!! GGCATTGAGTTGGAACAAAA+TGG - chr4.3:22034439-22034458 MS.gene40143:intron 40.0%
!!! CAATTTTTCAAGGGTCCGTT+TGG - chr4.3:22032021-22032040 MS.gene40143:intron 40.0%
!!! CCGCATTAGTTTTGGTCTTT+TGG + chr4.3:22032601-22032620 None:intergenic 40.0%
!!! TATTTTCTTTCTGGGGCTTC+TGG - chr4.3:22034065-22034084 MS.gene40143:intron 40.0%
AGACCGTTCAGAAACGAAGA+CGG - chr4.3:22034378-22034397 MS.gene40143:intron 45.0%
AGGCCTACCCATCATTGTAT+GGG + chr4.3:22035363-22035382 None:intergenic 45.0%
ATTGCAGCCATGTCTTGAAG+GGG - chr4.3:22037093-22037112 MS.gene40143:CDS 45.0%
CAACCGTCTTCGTTTCTGAA+CGG + chr4.3:22034384-22034403 None:intergenic 45.0%
CAATCCACTTCACTTCCATG+TGG + chr4.3:22035169-22035188 None:intergenic 45.0%
CACTTCCAGCCAAATCAATC+AGG + chr4.3:22036299-22036318 None:intergenic 45.0%
CAGTCAGTCTCTTAAAGACC+AGG - chr4.3:22035439-22035458 MS.gene40143:intron 45.0%
CATTACCCTCTTGTGTCTTC+AGG - chr4.3:22036081-22036100 MS.gene40143:intron 45.0%
CATTGACCTGAAGACACAAG+AGG + chr4.3:22036090-22036109 None:intergenic 45.0%
CGCTACTGCAAGTAATGTAG+AGG - chr4.3:22031889-22031908 MS.gene40143:intron 45.0%
CGTCAATAGAAATGCTTGGC+CGG - chr4.3:22034416-22034435 MS.gene40143:intron 45.0%
CTCTTGTGTCTTCAGGTCAA+TGG - chr4.3:22036088-22036107 MS.gene40143:intron 45.0%
CTGACTCTCCAGATCTCAAA+GGG - chr4.3:22035381-22035400 MS.gene40143:intron 45.0%
GAGATCTGATTGAAGCTCCT+CGG + chr4.3:22033023-22033042 None:intergenic 45.0%
GAGGAACAAGTCTCCTGTAA+AGG + chr4.3:22033831-22033850 None:intergenic 45.0%
GATTGCAGCCATGTCTTGAA+GGG - chr4.3:22037092-22037111 MS.gene40143:CDS 45.0%
GCGCATATGTGGTATAAACG+AGG - chr4.3:22036163-22036182 MS.gene40143:intron 45.0%
GCTTATGGACAAACAGGTTC+AGG - chr4.3:22035332-22035351 MS.gene40143:CDS 45.0%
GGAACGTTTGAAGGAAACTC+AGG - chr4.3:22036347-22036366 MS.gene40143:intron 45.0%
GGCACTACAAACATCGACAA+TGG + chr4.3:22035726-22035745 None:intergenic 45.0%
GGGCTGGAATTACAAAATGC+AGG - chr4.3:22035460-22035479 MS.gene40143:intron 45.0%
GTCAATAGAAATGCTTGGCC+GGG - chr4.3:22034417-22034436 MS.gene40143:intron 45.0%
GTCACTCCCTTCAGAGAATA+TGG - chr4.3:22036906-22036925 MS.gene40143:intron 45.0%
GTTGCTAGGCAAGATAGCAA+TGG + chr4.3:22033325-22033344 None:intergenic 45.0%
TCAAGTGCTTGAAAAGGAGG+AGG + chr4.3:22033373-22033392 None:intergenic 45.0%
TCAATAGAAATGCTTGGCCG+GGG - chr4.3:22034418-22034437 MS.gene40143:intron 45.0%
TCTGAACGGTCTCGTAGTAA+AGG + chr4.3:22034370-22034389 None:intergenic 45.0%
TGCGCAAAGTAACGACAAAG+TGG + chr4.3:22036148-22036167 None:intergenic 45.0%
TGCTCAAACAGGAGAGACTT+TGG + chr4.3:22036481-22036500 None:intergenic 45.0%
TGCTGAAAGGGAGAAGTTAG+AGG - chr4.3:22033890-22033909 MS.gene40143:intron 45.0%
TTGGAATCCCCTTCAAGACA+TGG + chr4.3:22037103-22037122 None:intergenic 45.0%
TTTGTTCCAACTCAATGCCC+CGG + chr4.3:22034438-22034457 None:intergenic 45.0%
! CTAATGCGGAGAGACTTGTT+TGG - chr4.3:22032612-22032631 MS.gene40143:CDS 45.0%
! CTGGTCTTTAAGAGACTGAC+TGG + chr4.3:22035441-22035460 None:intergenic 45.0%
! CTTTAAGAGACTGACTGGTC+TGG + chr4.3:22035436-22035455 None:intergenic 45.0%
! GCATTTTGTAATTCCAGCCC+TGG + chr4.3:22035460-22035479 None:intergenic 45.0%
! GGAGACTTGTTCCTCTCAAA+AGG - chr4.3:22033836-22033855 MS.gene40143:intron 45.0%
! GTCGTTACTTTGCGCATATG+TGG - chr4.3:22036152-22036171 MS.gene40143:intron 45.0%
! TTTGTGTGCGCTTTTCTGTG+TGG - chr4.3:22032676-22032695 MS.gene40143:intron 45.0%
!! ATGGAGAGACAAAGAGTGTC+TGG - chr4.3:22031824-22031843 MS.gene40143:intron 45.0%
!! GGTATCATCCCTTTGAGATC+TGG + chr4.3:22035392-22035411 None:intergenic 45.0%
!!! ACATTGGAGTGGTTTTGAGG+AGG + chr4.3:22031692-22031711 None:intergenic 45.0%
AGTCTCTTAAAGACCAGGGC+TGG - chr4.3:22035444-22035463 MS.gene40143:intron 50.0%
ATCTGTCATGAGACGCCACA+TGG - chr4.3:22035151-22035170 MS.gene40143:intron 50.0%
CAGGCCTACCCATCATTGTA+TGG + chr4.3:22035364-22035383 None:intergenic 50.0%
CCTGACTCTCCAGATCTCAA+AGG - chr4.3:22035380-22035399 MS.gene40143:intron 50.0%
GAGGAGGGAGGAAATCTCAT+CGG + chr4.3:22035747-22035766 None:intergenic 50.0%
GATGATCGTGATCGCCTACA+AGG - chr4.3:22033608-22033627 MS.gene40143:intron 50.0%
GATTTCCTCCCTCCTCCAAA+AGG - chr4.3:22035751-22035770 MS.gene40143:intron 50.0%
GCCTAGCAACTCTCTTCACT+GGG - chr4.3:22033335-22033354 MS.gene40143:CDS 50.0%
GGATTGCAGCCATGTCTTGA+AGG - chr4.3:22037091-22037110 MS.gene40143:CDS 50.0%
GGTGAAAACGTCATGCTGAG+AGG + chr4.3:22034623-22034642 None:intergenic 50.0%
TCCAAAAGGCTGCCCAAATC+AGG - chr4.3:22035765-22035784 MS.gene40143:intron 50.0%
TGCCTAGCAACTCTCTTCAC+TGG - chr4.3:22033334-22033353 MS.gene40143:CDS 50.0%
TGGCTTCTCGGAATCAGAAC+CGG - chr4.3:22031666-22031685 MS.gene40143:CDS 50.0%
TTCCTTCAAACGTTCCCCAG+TGG + chr4.3:22036343-22036362 None:intergenic 50.0%
!! CCTTTGAGATCTGGAGAGTC+AGG + chr4.3:22035383-22035402 None:intergenic 50.0%
!! TAGAGCGCCGTTAACTGCAA+TGG - chr4.3:22031859-22031878 MS.gene40143:intron 50.0%
!! TGATTTGGGCAGCCTTTTGG+AGG + chr4.3:22035766-22035785 None:intergenic 50.0%
!!! ACCTGATTTGGGCAGCCTTT+TGG + chr4.3:22035769-22035788 None:intergenic 50.0%
!!! TTTTTTGTGTCTGCGCCCTG+TGG - chr4.3:22034902-22034921 MS.gene40143:intron 50.0%
GACGCCACATGGAAGTGAAG+TGG - chr4.3:22035162-22035181 MS.gene40143:intron 55.0%
GCCCAGTGAAGAGAGTTGCT+AGG + chr4.3:22033339-22033358 None:intergenic 55.0%
TTTCAAGGAGTGGGGCCACT+GGG - chr4.3:22036325-22036344 MS.gene40143:intron 55.0%
! AAGGCAGAAGTGCAGACCAC+AGG + chr4.3:22034921-22034940 None:intergenic 55.0%
! AGGCAGAAGTGCAGACCACA+GGG + chr4.3:22034920-22034939 None:intergenic 55.0%
! GAGTGCCCTTGATGGCTACA+AGG - chr4.3:22034663-22034682 MS.gene40143:intron 55.0%
!! TTCTGGGGCTTCTGGCTAGA+TGG - chr4.3:22034073-22034092 MS.gene40143:intron 55.0%
!! TTGGGCAGCCTTTTGGAGGA+GGG + chr4.3:22035762-22035781 None:intergenic 55.0%
!! TTTGGGCAGCCTTTTGGAGG+AGG + chr4.3:22035763-22035782 None:intergenic 55.0%
!!! TGGAGTGGTTTTGAGGAGGC+CGG + chr4.3:22031688-22031707 None:intergenic 55.0%
CTTTCAAGGAGTGGGGCCAC+TGG - chr4.3:22036324-22036343 MS.gene40143:intron 60.0%
GGCCACTGGGGAACGTTTGA+AGG - chr4.3:22036338-22036357 MS.gene40143:intron 60.0%
TTCAAGGAGTGGGGCCACTG+GGG - chr4.3:22036326-22036345 MS.gene40143:intron 60.0%
! CTGGTGCAGAGTGCCCTTGA+TGG - chr4.3:22034655-22034674 MS.gene40143:intron 60.0%
!! GCTTGGCCGGGGCATTGAGT+TGG - chr4.3:22034429-22034448 MS.gene40143:intron 65.0%
!! GGCAGCCTTTTGGAGGAGGG+AGG + chr4.3:22035759-22035778 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 22031665 22037261 22031665 ID=MS.gene40143
chr4.3 mRNA 22031665 22037261 22031665 ID=MS.gene40143.t1;Parent=MS.gene40143
chr4.3 exon 22037217 22037261 22037217 ID=MS.gene40143.t1.exon1;Parent=MS.gene40143.t1
chr4.3 CDS 22037217 22037261 22037217 ID=cds.MS.gene40143.t1;Parent=MS.gene40143.t1
chr4.3 exon 22036923 22037117 22036923 ID=MS.gene40143.t1.exon2;Parent=MS.gene40143.t1
chr4.3 CDS 22036923 22037117 22036923 ID=cds.MS.gene40143.t1;Parent=MS.gene40143.t1
chr4.3 exon 22036385 22036508 22036385 ID=MS.gene40143.t1.exon3;Parent=MS.gene40143.t1
chr4.3 CDS 22036385 22036508 22036385 ID=cds.MS.gene40143.t1;Parent=MS.gene40143.t1
chr4.3 exon 22035767 22035927 22035767 ID=MS.gene40143.t1.exon4;Parent=MS.gene40143.t1
chr4.3 CDS 22035767 22035927 22035767 ID=cds.MS.gene40143.t1;Parent=MS.gene40143.t1
chr4.3 exon 22035193 22035381 22035193 ID=MS.gene40143.t1.exon5;Parent=MS.gene40143.t1
chr4.3 CDS 22035193 22035381 22035193 ID=cds.MS.gene40143.t1;Parent=MS.gene40143.t1
chr4.3 exon 22035015 22035089 22035015 ID=MS.gene40143.t1.exon6;Parent=MS.gene40143.t1
chr4.3 CDS 22035015 22035089 22035015 ID=cds.MS.gene40143.t1;Parent=MS.gene40143.t1
chr4.3 exon 22034688 22034834 22034688 ID=MS.gene40143.t1.exon7;Parent=MS.gene40143.t1
chr4.3 CDS 22034688 22034834 22034688 ID=cds.MS.gene40143.t1;Parent=MS.gene40143.t1
chr4.3 exon 22034466 22034598 22034466 ID=MS.gene40143.t1.exon8;Parent=MS.gene40143.t1
chr4.3 CDS 22034466 22034598 22034466 ID=cds.MS.gene40143.t1;Parent=MS.gene40143.t1
chr4.3 exon 22034242 22034354 22034242 ID=MS.gene40143.t1.exon9;Parent=MS.gene40143.t1
chr4.3 CDS 22034242 22034354 22034242 ID=cds.MS.gene40143.t1;Parent=MS.gene40143.t1
chr4.3 exon 22033445 22033606 22033445 ID=MS.gene40143.t1.exon10;Parent=MS.gene40143.t1
chr4.3 CDS 22033445 22033606 22033445 ID=cds.MS.gene40143.t1;Parent=MS.gene40143.t1
chr4.3 exon 22033140 22033360 22033140 ID=MS.gene40143.t1.exon11;Parent=MS.gene40143.t1
chr4.3 CDS 22033140 22033360 22033140 ID=cds.MS.gene40143.t1;Parent=MS.gene40143.t1
chr4.3 exon 22032742 22032823 22032742 ID=MS.gene40143.t1.exon12;Parent=MS.gene40143.t1
chr4.3 CDS 22032742 22032823 22032742 ID=cds.MS.gene40143.t1;Parent=MS.gene40143.t1
chr4.3 exon 22032558 22032662 22032558 ID=MS.gene40143.t1.exon13;Parent=MS.gene40143.t1
chr4.3 CDS 22032558 22032662 22032558 ID=cds.MS.gene40143.t1;Parent=MS.gene40143.t1
chr4.3 exon 22032352 22032456 22032352 ID=MS.gene40143.t1.exon14;Parent=MS.gene40143.t1
chr4.3 CDS 22032352 22032456 22032352 ID=cds.MS.gene40143.t1;Parent=MS.gene40143.t1
chr4.3 exon 22031665 22031826 22031665 ID=MS.gene40143.t1.exon15;Parent=MS.gene40143.t1
chr4.3 CDS 22031665 22031826 22031665 ID=cds.MS.gene40143.t1;Parent=MS.gene40143.t1
Gene Sequence

>MS.gene40143

ATGGCTTCTCGGAATCAGAACCGGCCTCCTCAAAACCACTCCAATGTAAGTCATTTATCAAATTCGTATTTTTACTTTAAAGATTATTGATTTAATCAATGAATTGAACGAATGTGATTAATTTCTTATGATTTCTGAAAAAAGGTTGGATCTGAAGAGATGGAGAGACAAAGAGTGTCTGGTAGAGCTAAAGCTAGAGCGCCGTTAACTGCAATGGTGAACAACGCTACTGCAAGTAATGTAGAGGGAATCGATTCAACCGCAATTGAGTTCACAAAAGATGATATAGAGGCATTGCTTAATGAGAAGATGAAAAAGGGAACTCCTTTTGATAATAAGGTTTGTCTTATCTTACTCAATTTTTCAAGGGTCCGTTTGGATTGACTTATTCGAGTTTATTTATAAGCACTTGTGAGACTGTTTTGGAGAACTTTTGAAAACGGCTTATGGCATGTTCAAATGTTCTGTTCAATTTATTTTCGTATGTTCTCCCGCATAGCTTTTTGCTAGAAATGTTCAAATATTTTATCTTTAAGCGGTTTATATGAAAATGCTGTTTTAATTTTAATATTTTACATTTTATTGTGAAAATAGTTTACACATACTTGCTTATGCTGTAAGCTGCAAATTAAGCTAATTAGGTTGTTTATCCAATCGGGGCTTTAATCTATCTTTTAATGTTATAAAAGTAGGTGTTGTTTATGGAACTTATTTGGGTGTTTGGATGTCTGTCCTCATGTTTTTGATACGCAGAAAAAAATGGAGCAGATGGTGGATCTTATTAAGCGGCTTAAGCTTTGTGTTCAATGGTGCGCCAACAAGATTGAAACGCTTCATTCTGAAGTTGAGTCTGCTGTTAAGAAGTGTTCTGATACTGGTATATTTTTTCTTCCGTCTTTTGTGATAAATATAATTGTGTTGGGATGTTTGTTTCCAAAAGACCAAAACTAATGCGGAGAGACTTGTTTGGCTATTATGCCCTAAATATTGTGACTGATTAGGTTGCTGAATTTTGTGTGCGCTTTTCTGTGTGGATTATGAAAAAAGCTAATATCATTGTCGTATATTGTGTTACTAGCAATTGTGAATTTAGGTGAAGTAGTTTGCTTATATAATAGGAAAGTCAATAGTGTAGTTCTCTAGTGACTGTGCAATAATTTGGCACTGTACAGAGCTTATAAATATTTGCACTTTTATGCATAATCTTTGTAAATGATTAACCAAAAATCTTTATTTTGCTTTTATCTTATTCATCATCCCTGAAAGTATTTATTTTGAGTAGGTTTCAAACAAAAGAATAATTATTTAAACATCACGTATTGCTTTATTCTCAGAGATTGAGATGAAAAATAAGACCGAGGAGCTTCAATCAGATCTCAATTCAGCTAACGAGGCTTATAGAAGACTTGAAACAGAGAAATCAATCATTGCTGAGAGCCTTAATGATACAAGAGATCTTAATAAGGAATTGCAGGATCGATTGAAATCTCTTAAAGTAAGTTGTTCCAATATGATTTTTTTTTTTTGTCGATTTAGTATTTGTATGACGTTGACATTTGAAAATGTACCAAATCATGAAAATGTTTGTGAACCTATTGGAAATTTTTTGCTGCTTCGTTAAAGAATGAATTGAAGGAGAGTAGCTGGGAAAAGCTAGCCATTGCTATCTTGCCTAGCAACTCTCTTCACTGGGCCAAAACATTAGCCTCCTCCTTTTCAAGCACTTGAATTTTGAATTGTTATAAGTAACATTGTTGCGAAGAGGAAATAATTAAGGCTTGCATTTTCTATCATTATTTATAGTATTCAATTCCTTTCCATATTTTTGTTGCAAGCCTCTCATTTTTTGTGTTGCGTTGATCCCTTTCTTCTTATCTCAGGATTCACAGAGTGAAGCTATAAAGCATAAAGAAATGTTCCGAGAAGAACTAAAAAAAATTACAGATGATCGTGATCGCCTACAAGGAAAACTAAATGATGTCATGTTAGAACGGGAAAAATACATAAAATTTAAATATGAAACATACTCAAAATTGGATAAATTGGCAAGTAAAACAGAGGCACTTGAGGTTCGTTGTTTTATTTTGTTGTCACCTATGTTAAGATCGTTTATTTATTATTCGTGTACTCTTGTGTTCAGTAGATTTATACAATAGTGTGTTTCCTTTACAGGAGACTTGTTCCTCTCAAAAGGAGAAAATAAATATACTGGAGCAAAAGTTACATGCTGAAAGGGAGAAGTTAGAGGTAATGCAATTGGGTTTTATTATATTTAATATGGAGAGTTGTACCATTATTAAAAATTTCTCATAAATAAATGATAAAATGTTTATGATGGTTTTTGCTTTTCAAGTTGAGTGCATCTATGATAAATAGATGTCCAAAACTGACACTAACTTATATTTTCTTTCTGGGGCTTCTGGCTAGATGGCTGATTTATCTGCTATGGAAACAAGAGCAACGTTTGAAGAGCAGAAAAGATTCATTCGTAAACTACAAGATCAATTGGCAGATAAAGAATTTCAAGTAGTTGAAGGAGAAAAGCTAAGGAAAAAACTGCACAACACTGTCTTGGTAATGTTTGGTTCGTTTTACTTTTTAGATCATCTAAAGCTTCTTGTCAACTGTAAGACATTATAAAGCTAAATTATTTTTATTTCTAGGAGCTGAAAGGAAATATTCGTGTGTTTTGTCGTGTACGACCTTTACTACGAGACCGTTCAGAAACGAAGACGGTTGTTTATTACCCTACGTCAATAGAAATGCTTGGCCGGGGCATTGAGTTGGAACAAAATGGTATAACACATATTTCTTTACCGCTACTCCACTCCTATTGTTTCTTACGAGTTTCATGCAATGCAATATTATGCTTAGTCAAGTATCACAATTTTGTCCTGTAAAAATTAGCAGGACAGAAACAGCTTTTTACATTTGACAAGGTGTTTAATCATGACGCCTCTCAGCATGACGTTTTCACCGAAATATCACAACTGGTGCAGAGTGCCCTTGATGGCTACAAGGTAATTCTACATTGCCTCCTTTCGCATCATAATTTATCAATCATATTCTTGTGTTTGAGATCCTACAGAATTTTTTTTGAGTGTTCTTGTCACTTGTAGCACAACTAAATTGTATGAATATTGAATATGCAGTAGTAATTTATTGATTGAATGTTTAACGTTGGTGATTGATGATTATGCACTTCATTATATGATATTATCATTTAATTACTTTAGGTTTTTTGTGTCTGCGCCCTGTGGTCTGCACTTCTGCCTTTAAAAACCTCCTACGTTTTAAAAAAGCTCCACCATCAATACTTTAAGTACACAATCTTTATATTTGTTTATATTTCCTATGAACCTTGGCATGATATTTTGTTCAAATAGGAGGAGACTTTATTTTAATACCTCCAACTTTCTTGTGGTTGATATCTTGGATGTGTCTGTGGACAACAAAAAATTCAGTTTATTTCTTGAAAAAACATTTATCTGTCATGAGACGCCACATGGAAGTGAAGTGGATTGTACCCTTATATTGACATGGCTTACTAGATTCTTACCTTTTCCTTCACGTATTCTTTGGCTTCTTTTTGTTGATTTGTTGTTTTGTTTTGGGTATAAATTAATGATCTGGACATGGCTGTTTATTATGCTAGGTATGCATTTTTGCTTATGGACAAACAGGTTCAGGAAAAACCCATACAATGATGGGTAGGCCTGACTCTCCAGATCTCAAAGGGATGATACCACTTTCTTTAGAACAGATATTCCAGACCAGTCAGTCTCTTAAAGACCAGGGCTGGAATTACAAAATGCAGGTTGGTGTACTATATTCTCATTTTCATGTTGACATGTGTCACATAAATGGAAGCTGAACCTGATTTTCATATTCATATTACTAGGCATCAGTATTGGAAATATATAATGAGACCATCAAAGATTTGTTATTGTCAAATCGGTCAAGTGGGATTGACCAAACACGAGCAGAAAATAGTGTTCATGGAAAACAGTACACTATTAGACATGACAAAAATGGAAACACACATGTTTTGGACCTCACCATTGTCGATGTTTGTAGTGCCGATGAGATTTCCTCCCTCCTCCAAAAGGCTGCCCAAATCAGGTATTATTGTGTTTGCTCCATATTAGGATCCTGTAAATGTTTTCTTTATATGGTGTAAGAATAAACATTGTGGGTGAATGAATACATGAAGATTGCATATTTTCTTCCGTATTGAAAATACTATTTCCATTCAACTTATCACTTTTTGAAGTTGTCTAGTTTAGATATATTTTATTAAATTAGAGTATCTACAATTAATATATAAAATACAATATGCTCTTGTTGTACTTGGTCACTACTAGAGTCTACATATAGCTTGGTGGTTTCATTTATGAAACATAGGAAATAAGAAATCATTACCCTCTTGTGTCTTCAGGTCAATGGGAAGAACACAAATGAATGAACAATCATCAAGAAGCCACTTTGTCGTTACTTTGCGCATATGTGGTATAAACGAGGTACATGCCTTCACGATAAGTTTTGTTACAGCTTAATCCTTATTATTTATTTCATAATGCATTTATTTCTGTTTTGCAGAACACTGAACAACAAGTACAAGGTGTCTTAAACCTGATTGATTTGGCTGGAAGTGAAAGACTTTCAAGGAGTGGGGCCACTGGGGAACGTTTGAAGGAAACTCAGGTGTCTTTTACTATTTGATTTGCATATTTATGATCTTGAGCTCCTGGTGAATGATTCAACTTTCTTAATAAACTAATTATTTTCATTGTTGTCATATTCAGGCTATCAACCAAAGTCTCTCCTGTTTGAGCAATGTCATATTTGCTTTGGCAAAGAAAGAAGAGCATGTTCCTTTCAGGGATTCAAAACTTACACACCTACTTCAGGTATATAAAAACCCATATAATTTTGCATTATTGATGAATTAATCAGACTGTTCTTGTTAATTTTAAATTAAAAAAAATTAAAAGAGAAAAAAGTTACACTGATGTTACATGTATAATTATCGATGAAATAAAATTTCATTGCAGTATCATTTCTTAAGATTGGATTCTAATATACTTATGGGATATGATTTTATCAATTGAACAATTAAAAGCATCAATTAAGGAGAAAAATGATTTTTATTTTACTTTTTTTGGAATGATGTTGTGCTACTTATTTAACAAATATTTAAGTGTTGTATTTTATACCGCTTTAATCCGTTGAAACAAGAAAGTCACTCCCTTCAGAGAATATGGACTTGATTATCATCTCATGTTAGAACTTAGGAATAATACCAATCATAACACAATCTACAATAACACTGTGTCAGTTTGACTTTATAAAATTATATTGTTGAACATCACTTTTCAATATGATTTTACTTTCATCCAGTGCTCCCATAACATATTTATATTGTCGGATTGCAGCCATGTCTTGAAGGGGATTCCAAAACTTTGATGTTTGTCAACATCTCACCTGATCAATCTTCAATTGACGAGTCACTTTGCTCTCTTCGATTTGCGTCTAGAGTCAATGCTGTGAAATTGGGGATTCACAATGTCAGACCTAGACATCCACTCAATGTTTAG
Protein sequence

>MS.gene40143.t1

MASRNQNRPPQNHSNVGSEEMERQRVSGRAKARAPLTAMVNNATASNVEGIDSTAIEFTKDDIEALLNEKMKKGTPFDNKKKMEQMVDLIKRLKLCVQWCANKIETLHSEVESAVKKCSDTEIEMKNKTEELQSDLNSANEAYRRLETEKSIIAESLNDTRDLNKELQDRLKSLKDSQSEAIKHKEMFREELKKITDDRDRLQGKLNDVMLEREKYIKFKYETYSKLDKLASKTEALEETCSSQKEKINILEQKLHAEREKLEMADLSAMETRATFEEQKRFIRKLQDQLADKEFQVVEGEKLRKKLHNTVLELKGNIRVFCRVRPLLRDRSETKTVVYYPTSIEMLGRGIELEQNAGQKQLFTFDKVFNHDASQHDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTHTMMGRPDSPDLKGMIPLSLEQIFQTSQSLKDQGWNYKMQASVLEIYNETIKDLLLSNRSSGIDQTRAENSVHGKQYTIRHDKNGNTHVLDLTIVDVCSADEISSLLQKAAQIRSMGRTQMNEQSSRSHFVVTLRICGINENTEQQVQGVLNLIDLAGSERLSRSGATGERLKETQAINQSLSCLSNVIFALAKKEEHVPFRDSKLTHLLQPCLEGDSKTLMFVNISPDQSSIDESLCSLRFASRVNAVKLGIHNVRPRHPLNV