Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47109.t1 | XP_013451392.1 | 97.4 | 455 | 12 | 0 | 1 | 455 | 1 | 455 | 3.90E-258 | 900.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47109.t1 | Q9FKS8 | 79.7 | 438 | 89 | 0 | 18 | 455 | 9 | 446 | 6.4e-209 | 728.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47109.t1 | A0A072U700 | 97.4 | 455 | 12 | 0 | 1 | 455 | 1 | 455 | 2.8e-258 | 900.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049483 | MS.gene47109 | 0.817839 | 2.68E-52 | -1.69E-46 |
| MS.gene049573 | MS.gene47109 | 0.817202 | 3.73E-52 | -1.69E-46 |
| MS.gene050129 | MS.gene47109 | 0.822047 | 2.92E-53 | -1.69E-46 |
| MS.gene050363 | MS.gene47109 | 0.853202 | 2.79E-61 | -1.69E-46 |
| MS.gene050381 | MS.gene47109 | 0.826295 | 2.93E-54 | -1.69E-46 |
| MS.gene050883 | MS.gene47109 | 0.825984 | 3.48E-54 | -1.69E-46 |
| MS.gene051127 | MS.gene47109 | 0.813116 | 3.01E-51 | -1.69E-46 |
| MS.gene05141 | MS.gene47109 | 0.81851 | 1.89E-52 | -1.69E-46 |
| MS.gene051946 | MS.gene47109 | 0.840949 | 6.39E-58 | -1.69E-46 |
| MS.gene052053 | MS.gene47109 | 0.832252 | 1.05E-55 | -1.69E-46 |
| MS.gene053549 | MS.gene47109 | 0.804162 | 2.47E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene47109 | 0.846315 | 2.35E-59 | -1.69E-46 |
| MS.gene053826 | MS.gene47109 | 0.804514 | 2.08E-49 | -1.69E-46 |
| MS.gene054616 | MS.gene47109 | 0.80327 | 3.78E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene47109 | 0.801138 | 1.04E-48 | -1.69E-46 |
| MS.gene055154 | MS.gene47109 | 0.8009 | 1.16E-48 | -1.69E-46 |
| MS.gene055549 | MS.gene47109 | 0.8045 | 2.10E-49 | -1.69E-46 |
| MS.gene055550 | MS.gene47109 | 0.803228 | 3.85E-49 | -1.69E-46 |
| MS.gene056310 | MS.gene47109 | 0.80467 | 1.93E-49 | -1.69E-46 |
| MS.gene056311 | MS.gene47109 | 0.828186 | 1.03E-54 | -1.69E-46 |
| MS.gene056530 | MS.gene47109 | 0.807307 | 5.39E-50 | -1.69E-46 |
| MS.gene057014 | MS.gene47109 | 0.827908 | 1.21E-54 | -1.69E-46 |
| MS.gene058493 | MS.gene47109 | 0.815318 | 9.83E-52 | -1.69E-46 |
| MS.gene058494 | MS.gene47109 | 0.801484 | 8.81E-49 | -1.69E-46 |
| MS.gene058628 | MS.gene47109 | 0.846911 | 1.61E-59 | -1.69E-46 |
| MS.gene058629 | MS.gene47109 | 0.834574 | 2.77E-56 | -1.69E-46 |
| MS.gene058630 | MS.gene47109 | 0.846398 | 2.23E-59 | -1.69E-46 |
| MS.gene05884 | MS.gene47109 | 0.859145 | 5.06E-63 | -1.69E-46 |
| MS.gene059547 | MS.gene47109 | 0.848229 | 7.00E-60 | -1.69E-46 |
| MS.gene059690 | MS.gene47109 | 0.805338 | 1.40E-49 | -1.69E-46 |
| MS.gene059694 | MS.gene47109 | 0.804979 | 1.67E-49 | -1.69E-46 |
| MS.gene059697 | MS.gene47109 | 0.805497 | 1.30E-49 | -1.69E-46 |
| MS.gene06012 | MS.gene47109 | 0.861791 | 8.00E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47109.t1 | MTR_6g022790 | 97.363 | 455 | 12 | 0 | 1 | 455 | 1 | 455 | 0.0 | 921 |
| MS.gene47109.t1 | MTR_7g038910 | 84.758 | 433 | 66 | 0 | 23 | 455 | 11 | 443 | 0.0 | 732 |
| MS.gene47109.t1 | MTR_2g101920 | 75.439 | 456 | 105 | 2 | 1 | 455 | 12 | 461 | 0.0 | 701 |
| MS.gene47109.t1 | MTR_6g023065 | 74.839 | 465 | 105 | 3 | 1 | 455 | 1 | 463 | 0.0 | 690 |
| MS.gene47109.t1 | MTR_6g022780 | 78.322 | 429 | 90 | 2 | 28 | 455 | 2 | 428 | 0.0 | 662 |
| MS.gene47109.t1 | MTR_6g023075 | 76.347 | 427 | 100 | 1 | 30 | 455 | 2 | 428 | 0.0 | 648 |
| MS.gene47109.t1 | MTR_8g080120 | 66.898 | 432 | 143 | 0 | 24 | 455 | 5 | 436 | 0.0 | 640 |
| MS.gene47109.t1 | MTR_7g038910 | 85.393 | 356 | 52 | 0 | 23 | 378 | 11 | 366 | 0.0 | 637 |
| MS.gene47109.t1 | MTR_2g096830 | 74.769 | 432 | 103 | 2 | 25 | 455 | 2 | 428 | 0.0 | 621 |
| MS.gene47109.t1 | MTR_7g038910 | 85.057 | 348 | 52 | 0 | 23 | 370 | 11 | 358 | 0.0 | 620 |
| MS.gene47109.t1 | MTR_4g103890 | 67.718 | 412 | 133 | 0 | 42 | 453 | 10 | 421 | 0.0 | 605 |
| MS.gene47109.t1 | MTR_5g054730 | 59.773 | 440 | 174 | 1 | 16 | 455 | 3 | 439 | 0.0 | 548 |
| MS.gene47109.t1 | MTR_3g085820 | 70.000 | 360 | 108 | 0 | 18 | 377 | 9 | 368 | 0.0 | 539 |
| MS.gene47109.t1 | MTR_1g093020 | 59.217 | 434 | 173 | 1 | 22 | 455 | 8 | 437 | 0.0 | 538 |
| MS.gene47109.t1 | MTR_1g093030 | 58.741 | 429 | 177 | 0 | 27 | 455 | 9 | 437 | 0.0 | 534 |
| MS.gene47109.t1 | MTR_0531s0020 | 74.859 | 354 | 78 | 3 | 1 | 345 | 1 | 352 | 0.0 | 523 |
| MS.gene47109.t1 | MTR_2g096830 | 74.561 | 342 | 86 | 1 | 30 | 370 | 2 | 343 | 0.0 | 516 |
| MS.gene47109.t1 | MTR_1g093020 | 60.050 | 403 | 157 | 1 | 22 | 424 | 8 | 406 | 4.25e-179 | 507 |
| MS.gene47109.t1 | MTR_3g005740 | 52.620 | 458 | 212 | 3 | 2 | 455 | 13 | 469 | 6.38e-173 | 493 |
| MS.gene47109.t1 | MTR_2g012470 | 38.657 | 432 | 253 | 6 | 34 | 454 | 87 | 517 | 4.18e-97 | 301 |
| MS.gene47109.t1 | MTR_3g115090 | 37.471 | 435 | 258 | 6 | 34 | 455 | 76 | 509 | 6.08e-95 | 295 |
| MS.gene47109.t1 | MTR_5g023240 | 38.372 | 430 | 243 | 7 | 34 | 451 | 78 | 497 | 1.26e-93 | 292 |
| MS.gene47109.t1 | MTR_4g075750 | 35.118 | 467 | 280 | 7 | 9 | 454 | 35 | 499 | 1.23e-92 | 289 |
| MS.gene47109.t1 | MTR_5g023260 | 35.076 | 459 | 278 | 8 | 16 | 455 | 75 | 532 | 1.22e-88 | 280 |
| MS.gene47109.t1 | MTR_1g105980 | 32.704 | 477 | 250 | 15 | 24 | 452 | 12 | 465 | 2.28e-62 | 209 |
| MS.gene47109.t1 | MTR_3g110660 | 31.144 | 472 | 270 | 13 | 24 | 452 | 17 | 476 | 2.25e-60 | 204 |
| MS.gene47109.t1 | MTR_4g055610 | 29.221 | 462 | 301 | 10 | 13 | 455 | 6 | 460 | 2.01e-59 | 202 |
| MS.gene47109.t1 | MTR_8g099320 | 28.384 | 458 | 299 | 10 | 13 | 455 | 5 | 448 | 1.09e-58 | 199 |
| MS.gene47109.t1 | MTR_1g007380 | 31.078 | 473 | 279 | 12 | 19 | 452 | 2 | 466 | 1.33e-58 | 200 |
| MS.gene47109.t1 | MTR_1g105990 | 32.823 | 457 | 247 | 14 | 42 | 450 | 21 | 465 | 7.64e-58 | 197 |
| MS.gene47109.t1 | MTR_1g492640 | 29.754 | 447 | 293 | 9 | 23 | 455 | 40 | 479 | 1.79e-56 | 194 |
| MS.gene47109.t1 | MTR_1g105995 | 30.573 | 471 | 266 | 14 | 24 | 451 | 11 | 463 | 3.84e-56 | 193 |
| MS.gene47109.t1 | MTR_1g106000 | 30.819 | 464 | 257 | 12 | 42 | 452 | 15 | 467 | 1.78e-54 | 189 |
| MS.gene47109.t1 | MTR_3g088475 | 28.601 | 479 | 293 | 12 | 14 | 452 | 5 | 474 | 1.65e-52 | 184 |
| MS.gene47109.t1 | MTR_4g073520 | 29.555 | 494 | 277 | 17 | 5 | 452 | 38 | 506 | 4.39e-52 | 183 |
| MS.gene47109.t1 | MTR_4g073520 | 29.555 | 494 | 277 | 17 | 5 | 452 | 38 | 506 | 4.76e-52 | 183 |
| MS.gene47109.t1 | MTR_3g088455 | 28.719 | 484 | 289 | 13 | 12 | 452 | 3 | 473 | 1.60e-51 | 181 |
| MS.gene47109.t1 | MTR_1g070470 | 30.134 | 448 | 281 | 14 | 24 | 454 | 5 | 437 | 1.36e-49 | 175 |
| MS.gene47109.t1 | MTR_1g007270 | 28.899 | 436 | 264 | 12 | 24 | 419 | 5 | 434 | 2.30e-48 | 172 |
| MS.gene47109.t1 | MTR_3g096800 | 30.022 | 453 | 267 | 10 | 42 | 455 | 33 | 474 | 5.49e-48 | 171 |
| MS.gene47109.t1 | MTR_3g096830 | 30.254 | 433 | 258 | 11 | 17 | 419 | 11 | 429 | 6.18e-48 | 171 |
| MS.gene47109.t1 | MTR_3g461480 | 28.829 | 444 | 266 | 11 | 42 | 445 | 27 | 460 | 8.43e-48 | 171 |
| MS.gene47109.t1 | MTR_8g094290 | 28.924 | 446 | 273 | 11 | 42 | 451 | 31 | 468 | 8.46e-47 | 168 |
| MS.gene47109.t1 | MTR_3g096840 | 29.821 | 446 | 277 | 8 | 42 | 455 | 39 | 480 | 1.09e-45 | 166 |
| MS.gene47109.t1 | MTR_5g096840 | 30.090 | 442 | 263 | 13 | 42 | 445 | 29 | 462 | 1.24e-45 | 165 |
| MS.gene47109.t1 | MTR_3g461440 | 29.099 | 433 | 265 | 13 | 41 | 439 | 22 | 446 | 2.77e-45 | 164 |
| MS.gene47109.t1 | MTR_1g029750 | 28.723 | 470 | 272 | 13 | 12 | 434 | 4 | 457 | 3.48e-45 | 164 |
| MS.gene47109.t1 | MTR_1g007240 | 27.484 | 473 | 284 | 14 | 23 | 455 | 1 | 454 | 6.36e-45 | 163 |
| MS.gene47109.t1 | MTR_3g461470 | 28.472 | 432 | 269 | 12 | 41 | 439 | 22 | 446 | 1.70e-43 | 159 |
| MS.gene47109.t1 | MTR_3g110660 | 32.738 | 336 | 192 | 9 | 24 | 335 | 17 | 342 | 1.08e-42 | 155 |
| MS.gene47109.t1 | MTR_3g061390 | 29.117 | 419 | 256 | 11 | 41 | 426 | 22 | 432 | 8.12e-42 | 154 |
| MS.gene47109.t1 | MTR_3g110430 | 26.261 | 476 | 304 | 13 | 19 | 453 | 35 | 504 | 2.10e-41 | 154 |
| MS.gene47109.t1 | MTR_1g492640 | 29.944 | 354 | 229 | 8 | 114 | 455 | 1 | 347 | 4.75e-41 | 150 |
| MS.gene47109.t1 | MTR_5g096850 | 26.582 | 474 | 290 | 14 | 14 | 447 | 5 | 460 | 8.64e-40 | 149 |
| MS.gene47109.t1 | MTR_3g088465 | 29.367 | 395 | 247 | 12 | 12 | 384 | 3 | 387 | 2.06e-39 | 147 |
| MS.gene47109.t1 | MTR_1g007180 | 25.166 | 453 | 286 | 12 | 23 | 436 | 1 | 439 | 1.36e-38 | 145 |
| MS.gene47109.t1 | MTR_3g110420 | 24.681 | 470 | 313 | 12 | 20 | 454 | 4 | 467 | 1.64e-38 | 145 |
| MS.gene47109.t1 | MTR_2g031750 | 25.771 | 454 | 282 | 13 | 23 | 436 | 1 | 439 | 2.16e-38 | 145 |
| MS.gene47109.t1 | MTR_3g461430 | 26.606 | 436 | 272 | 12 | 41 | 439 | 29 | 453 | 6.94e-38 | 144 |
| MS.gene47109.t1 | MTR_4g104510 | 24.891 | 458 | 326 | 11 | 4 | 455 | 1 | 446 | 1.80e-36 | 139 |
| MS.gene47109.t1 | MTR_4g104510 | 25.054 | 459 | 326 | 12 | 4 | 455 | 1 | 448 | 5.20e-36 | 138 |
| MS.gene47109.t1 | MTR_1g492640 | 30.000 | 320 | 206 | 7 | 23 | 331 | 22 | 334 | 4.52e-35 | 134 |
| MS.gene47109.t1 | MTR_1g492640 | 30.000 | 320 | 206 | 7 | 23 | 331 | 40 | 352 | 6.65e-35 | 134 |
| MS.gene47109.t1 | MTR_3g085800 | 66.667 | 81 | 27 | 0 | 375 | 455 | 4 | 84 | 2.43e-33 | 121 |
| MS.gene47109.t1 | MTR_3g461440 | 30.612 | 294 | 174 | 9 | 170 | 439 | 22 | 309 | 6.85e-33 | 127 |
| MS.gene47109.t1 | MTR_2g031750 | 25.749 | 334 | 209 | 10 | 138 | 436 | 43 | 372 | 1.47e-26 | 110 |
| MS.gene47109.t1 | MTR_3g110420 | 25.449 | 334 | 226 | 9 | 20 | 335 | 4 | 332 | 2.44e-26 | 109 |
| MS.gene47109.t1 | MTR_5g081630 | 25.189 | 397 | 270 | 11 | 70 | 455 | 1 | 381 | 2.16e-24 | 104 |
| MS.gene47109.t1 | MTR_3g069960 | 27.013 | 385 | 242 | 14 | 88 | 455 | 19 | 381 | 1.10e-22 | 99.8 |
| MS.gene47109.t1 | MTR_3g069960 | 27.013 | 385 | 242 | 14 | 88 | 455 | 72 | 434 | 1.15e-22 | 100 |
| MS.gene47109.t1 | MTR_1g007180 | 25.352 | 284 | 181 | 7 | 181 | 436 | 75 | 355 | 1.83e-22 | 99.0 |
| MS.gene47109.t1 | MTR_4g055637 | 30.556 | 216 | 133 | 5 | 250 | 455 | 168 | 376 | 7.39e-20 | 91.3 |
| MS.gene47109.t1 | MTR_3g465440 | 22.494 | 409 | 286 | 11 | 44 | 443 | 47 | 433 | 2.25e-19 | 91.7 |
| MS.gene47109.t1 | MTR_3g465510 | 23.853 | 436 | 294 | 15 | 23 | 445 | 18 | 428 | 2.07e-18 | 87.4 |
| MS.gene47109.t1 | MTR_1g492640 | 25.792 | 221 | 161 | 2 | 23 | 241 | 22 | 241 | 2.19e-18 | 85.1 |
| MS.gene47109.t1 | MTR_1g492640 | 25.792 | 221 | 161 | 2 | 23 | 241 | 40 | 259 | 5.87e-18 | 84.3 |
| MS.gene47109.t1 | MTR_5g017200 | 30.739 | 257 | 147 | 7 | 24 | 267 | 22 | 260 | 9.82e-18 | 83.6 |
| MS.gene47109.t1 | MTR_1g094620 | 22.624 | 442 | 289 | 15 | 12 | 435 | 111 | 517 | 1.60e-17 | 85.5 |
| MS.gene47109.t1 | MTR_1g094620 | 22.717 | 449 | 287 | 16 | 12 | 435 | 111 | 524 | 2.82e-17 | 84.7 |
| MS.gene47109.t1 | MTR_8g467180 | 21.393 | 402 | 281 | 13 | 26 | 418 | 2 | 377 | 5.40e-17 | 83.2 |
| MS.gene47109.t1 | MTR_8g467190 | 23.360 | 381 | 252 | 13 | 50 | 418 | 24 | 376 | 1.30e-16 | 82.0 |
| MS.gene47109.t1 | MTR_7g010750 | 23.684 | 418 | 263 | 14 | 14 | 409 | 7 | 390 | 2.17e-16 | 81.3 |
| MS.gene47109.t1 | MTR_7g010790 | 24.510 | 408 | 252 | 15 | 32 | 416 | 25 | 399 | 3.32e-16 | 80.9 |
| MS.gene47109.t1 | MTR_3g033730 | 23.947 | 380 | 249 | 12 | 50 | 416 | 47 | 399 | 1.05e-14 | 76.3 |
| MS.gene47109.t1 | MTR_7g062410 | 20.146 | 412 | 275 | 15 | 25 | 413 | 11 | 391 | 4.59e-14 | 74.3 |
| MS.gene47109.t1 | MTR_4g033275 | 33.333 | 96 | 61 | 2 | 332 | 424 | 4 | 99 | 5.91e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47109.t1 | AT5G40780 | 79.680 | 438 | 89 | 0 | 18 | 455 | 9 | 446 | 0.0 | 746 |
| MS.gene47109.t1 | AT5G40780 | 81.156 | 398 | 75 | 0 | 58 | 455 | 1 | 398 | 0.0 | 687 |
| MS.gene47109.t1 | AT5G40780 | 81.156 | 398 | 75 | 0 | 58 | 455 | 1 | 398 | 0.0 | 687 |
| MS.gene47109.t1 | AT1G48640 | 75.113 | 442 | 107 | 2 | 14 | 455 | 15 | 453 | 0.0 | 680 |
| MS.gene47109.t1 | AT1G24400 | 76.157 | 432 | 103 | 0 | 24 | 455 | 10 | 441 | 0.0 | 670 |
| MS.gene47109.t1 | AT1G67640 | 74.201 | 438 | 113 | 0 | 18 | 455 | 4 | 441 | 0.0 | 645 |
| MS.gene47109.t1 | AT1G61270 | 63.719 | 441 | 153 | 3 | 9 | 445 | 1 | 438 | 0.0 | 585 |
| MS.gene47109.t1 | AT3G01760 | 64.450 | 436 | 145 | 5 | 17 | 445 | 5 | 437 | 0.0 | 575 |
| MS.gene47109.t1 | AT1G25530 | 59.907 | 429 | 171 | 1 | 28 | 455 | 12 | 440 | 0.0 | 527 |
| MS.gene47109.t1 | AT1G71680 | 59.142 | 443 | 180 | 1 | 14 | 455 | 6 | 448 | 2.86e-179 | 509 |
| MS.gene47109.t1 | AT1G71680 | 60.894 | 358 | 139 | 1 | 14 | 370 | 6 | 363 | 2.13e-151 | 435 |
| MS.gene47109.t1 | AT1G47670 | 39.120 | 432 | 251 | 6 | 34 | 454 | 85 | 515 | 2.08e-96 | 300 |
| MS.gene47109.t1 | AT4G35180 | 31.637 | 452 | 286 | 11 | 3 | 435 | 10 | 457 | 1.06e-67 | 224 |
| MS.gene47109.t1 | AT1G10010 | 32.278 | 474 | 273 | 13 | 18 | 452 | 5 | 469 | 1.85e-63 | 213 |
| MS.gene47109.t1 | AT1G10010 | 32.278 | 474 | 273 | 13 | 18 | 452 | 6 | 470 | 2.39e-63 | 212 |
| MS.gene47109.t1 | AT1G08230 | 31.858 | 452 | 282 | 10 | 24 | 455 | 4 | 449 | 3.07e-63 | 211 |
| MS.gene47109.t1 | AT5G41800 | 28.868 | 433 | 278 | 9 | 42 | 455 | 26 | 447 | 6.19e-57 | 195 |
| MS.gene47109.t1 | AT1G58360 | 31.452 | 496 | 278 | 16 | 1 | 452 | 1 | 478 | 7.05e-57 | 196 |
| MS.gene47109.t1 | AT4G35180 | 34.084 | 311 | 193 | 7 | 3 | 303 | 10 | 318 | 3.59e-54 | 184 |
| MS.gene47109.t1 | AT5G49630 | 30.126 | 478 | 272 | 13 | 22 | 452 | 14 | 476 | 1.01e-51 | 182 |
| MS.gene47109.t1 | AT5G09220 | 29.075 | 454 | 268 | 11 | 42 | 452 | 45 | 487 | 2.92e-49 | 175 |
| MS.gene47109.t1 | AT1G44100 | 28.541 | 473 | 280 | 14 | 26 | 452 | 14 | 474 | 9.05e-47 | 168 |
| MS.gene47109.t1 | AT5G63850 | 28.931 | 477 | 273 | 15 | 21 | 452 | 5 | 460 | 6.94e-46 | 166 |
| MS.gene47109.t1 | AT1G08230 | 31.831 | 355 | 223 | 7 | 114 | 455 | 1 | 349 | 1.64e-44 | 159 |
| MS.gene47109.t1 | AT1G77380 | 29.111 | 450 | 265 | 14 | 18 | 426 | 4 | 440 | 3.61e-44 | 161 |
| MS.gene47109.t1 | AT1G08230 | 31.722 | 331 | 207 | 7 | 138 | 455 | 6 | 330 | 1.71e-40 | 148 |
| MS.gene47109.t1 | AT1G08230 | 31.722 | 331 | 207 | 7 | 138 | 455 | 6 | 330 | 1.71e-40 | 148 |
| MS.gene47109.t1 | AT1G08230 | 31.722 | 331 | 207 | 7 | 138 | 455 | 6 | 330 | 1.71e-40 | 148 |
| MS.gene47109.t1 | AT5G23810 | 28.132 | 423 | 260 | 10 | 41 | 426 | 24 | 439 | 8.99e-38 | 144 |
| MS.gene47109.t1 | AT5G23810 | 28.438 | 320 | 204 | 8 | 41 | 340 | 24 | 338 | 5.53e-26 | 108 |
| MS.gene47109.t1 | AT2G39890 | 23.973 | 438 | 311 | 13 | 28 | 455 | 15 | 440 | 8.49e-26 | 109 |
| MS.gene47109.t1 | AT2G39890 | 23.973 | 438 | 311 | 13 | 28 | 455 | 15 | 440 | 8.49e-26 | 109 |
| MS.gene47109.t1 | AT3G55740 | 24.558 | 452 | 315 | 14 | 14 | 455 | 2 | 437 | 1.15e-24 | 106 |
| MS.gene47109.t1 | AT2G36590 | 25.120 | 418 | 292 | 14 | 18 | 427 | 2 | 406 | 2.30e-24 | 105 |
| MS.gene47109.t1 | AT2G39890 | 23.664 | 393 | 281 | 11 | 70 | 455 | 1 | 381 | 3.33e-23 | 101 |
| MS.gene47109.t1 | AT3G55740 | 25.126 | 398 | 269 | 13 | 70 | 455 | 1 | 381 | 2.05e-22 | 99.0 |
| MS.gene47109.t1 | AT3G55740 | 25.126 | 398 | 269 | 13 | 70 | 455 | 1 | 381 | 2.05e-22 | 99.0 |
| MS.gene47109.t1 | AT5G02180 | 24.764 | 424 | 280 | 16 | 22 | 431 | 137 | 535 | 1.60e-19 | 91.7 |
| MS.gene47109.t1 | AT5G02180 | 24.764 | 424 | 280 | 16 | 22 | 431 | 137 | 535 | 1.60e-19 | 91.7 |
| MS.gene47109.t1 | AT5G15240 | 21.975 | 405 | 263 | 11 | 23 | 409 | 14 | 383 | 5.99e-18 | 86.3 |
| MS.gene47109.t1 | AT5G02170 | 24.242 | 429 | 256 | 13 | 7 | 413 | 80 | 461 | 8.61e-18 | 85.9 |
| MS.gene47109.t1 | AT5G02170 | 22.955 | 440 | 277 | 13 | 7 | 413 | 80 | 490 | 8.83e-17 | 83.2 |
| MS.gene47109.t1 | AT2G36590 | 26.235 | 324 | 220 | 13 | 18 | 335 | 2 | 312 | 5.47e-16 | 79.3 |
| MS.gene47109.t1 | AT3G09340 | 24.074 | 378 | 245 | 14 | 50 | 413 | 139 | 488 | 4.61e-15 | 77.8 |
| MS.gene47109.t1 | AT3G09330 | 24.093 | 386 | 258 | 14 | 50 | 426 | 139 | 498 | 6.64e-15 | 77.4 |
| MS.gene47109.t1 | AT5G23810 | 28.205 | 234 | 151 | 6 | 41 | 258 | 24 | 256 | 7.09e-15 | 75.1 |
| MS.gene47109.t1 | AT2G39130 | 20.261 | 459 | 323 | 13 | 5 | 447 | 116 | 547 | 6.99e-13 | 70.9 |
| MS.gene47109.t1 | AT2G39130 | 20.261 | 459 | 323 | 13 | 5 | 447 | 116 | 547 | 6.99e-13 | 70.9 |
| MS.gene47109.t1 | AT3G28960 | 19.554 | 404 | 279 | 12 | 23 | 414 | 1 | 370 | 2.62e-11 | 65.5 |
| MS.gene47109.t1 | AT3G28960 | 19.554 | 404 | 279 | 12 | 23 | 414 | 1 | 370 | 2.62e-11 | 65.5 |
| MS.gene47109.t1 | AT3G28960 | 19.554 | 404 | 279 | 12 | 23 | 414 | 1 | 370 | 2.62e-11 | 65.5 |
| MS.gene47109.t1 | AT3G28960 | 19.554 | 404 | 279 | 12 | 23 | 414 | 1 | 370 | 2.62e-11 | 65.5 |
| MS.gene47109.t1 | AT5G39715 | 56.250 | 48 | 21 | 0 | 335 | 382 | 2 | 49 | 4.98e-11 | 60.1 |
Find 102 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGATTTCAACTCAATTTC+TGG | 0.033736 | 6.3:-16321775 | MS.gene47109:CDS |
| CTTATTGGTTACTGGATATT+TGG | 0.096738 | 6.3:-16320356 | MS.gene47109:CDS |
| TACTTCCCTGTTGCTCTTAT+TGG | 0.101046 | 6.3:-16320371 | MS.gene47109:CDS |
| ATCTACAAACCAAGAAAATT+TGG | 0.155128 | 6.3:-16319221 | MS.gene47109:CDS |
| CTGTTGCTCTTATTGGTTAC+TGG | 0.160772 | 6.3:-16320364 | MS.gene47109:CDS |
| GCTTGTCATGGTGGGCTAAT+TGG | 0.174066 | 6.3:-16319199 | MS.gene47109:CDS |
| TGGTGTTAACATTGTTTATA+TGG | 0.261030 | 6.3:-16321917 | MS.gene47109:CDS |
| TTTGGCAAATATGGCAAGTT+TGG | 0.265705 | 6.3:-16324149 | None:intergenic |
| TCATGTGATTGGAAGTTATC+AGG | 0.283115 | 6.3:-16320252 | MS.gene47109:intron |
| ATGGTTGGAGCTGGTGTTCT+AGG | 0.288555 | 6.3:-16322433 | MS.gene47109:CDS |
| CTTGTCATGGTGGGCTAATT+GGG | 0.300776 | 6.3:-16319198 | MS.gene47109:intron |
| CAACAACTTGTGGTAGAAAT+TGG | 0.304466 | 6.3:-16321937 | MS.gene47109:CDS |
| TAACCATACTTATTCTTTCA+TGG | 0.324140 | 6.3:-16322092 | MS.gene47109:CDS |
| AGCAAATATCATGATGAAAT+AGG | 0.324535 | 6.3:+16321825 | None:intergenic |
| CATCTAAAAGGAATGCAAAA+TGG | 0.332595 | 6.3:-16322486 | MS.gene47109:CDS |
| CTCAATTTCTGGTGTGTCCT+TGG | 0.332754 | 6.3:-16321764 | MS.gene47109:CDS |
| GGCTTCCAATTACATCTAAA+AGG | 0.342698 | 6.3:-16322498 | MS.gene47109:CDS |
| CCAGAAATTGAGTTGAAATC+AGG | 0.349657 | 6.3:+16321775 | None:intergenic |
| TTGGAAACTGAATCACTAAA+TGG | 0.361333 | 6.3:-16324130 | MS.gene47109:CDS |
| GGAACTTTGGATGGTTTCTC+AGG | 0.369420 | 6.3:+16320440 | None:intergenic |
| CTTACAGGTCTCTGGTGATT+AGG | 0.371071 | 6.3:+16324091 | None:intergenic |
| CAGTAACCAATAAGAGCAAC+AGG | 0.372207 | 6.3:+16320365 | None:intergenic |
| CAATGTAGAGTATGGATATA+AGG | 0.374317 | 6.3:-16320576 | MS.gene47109:CDS |
| ACAGCTACTCTACAATTTCA+TGG | 0.375999 | 6.3:-16320628 | MS.gene47109:intron |
| CTCCACATTGGAACTTTGGA+TGG | 0.379541 | 6.3:+16320431 | None:intergenic |
| AAACGAGACAATGTAGAGTA+TGG | 0.381120 | 6.3:-16320584 | MS.gene47109:CDS |
| TGACTTACAAAGTATGTTGT+TGG | 0.382356 | 6.3:+16319422 | None:intergenic |
| GATCCATGAAAGAATAAGTA+TGG | 0.383511 | 6.3:+16322089 | None:intergenic |
| TCCTCTCCACATTGGAACTT+TGG | 0.386707 | 6.3:+16320427 | None:intergenic |
| TAATGATTGTATCTCCCATT+GGG | 0.391663 | 6.3:-16319047 | MS.gene47109:CDS |
| CGGCAGCAGTCATGTCCTTC+AGG | 0.392111 | 6.3:-16321741 | MS.gene47109:intron |
| ATTATACACACTTTGGCAAA+TGG | 0.392217 | 6.3:-16322061 | MS.gene47109:CDS |
| AACTAGGTCAACATGCCTTT+GGG | 0.402352 | 6.3:-16321990 | MS.gene47109:CDS |
| ATTGTACGTAATGTATATGT+TGG | 0.404477 | 6.3:-16319625 | MS.gene47109:intron |
| TTTGTTGTTATTCATGTGAT+TGG | 0.408243 | 6.3:-16320263 | MS.gene47109:CDS |
| GAGATGCATGAAATGGTTCC+AGG | 0.408422 | 6.3:-16322036 | MS.gene47109:CDS |
| GAACTAGGTCAACATGCCTT+TGG | 0.410138 | 6.3:-16321991 | MS.gene47109:CDS |
| AGTCTATGAGTAAAACTTGT+AGG | 0.419209 | 6.3:+16318993 | None:intergenic |
| GATGGTTTCTCAGGTGTTGA+TGG | 0.434128 | 6.3:+16320449 | None:intergenic |
| AATGTATTGTGCAGGGGTCC+AGG | 0.434625 | 6.3:-16322117 | MS.gene47109:intron |
| CCCCATGCCATGGCACAACT+TGG | 0.438233 | 6.3:-16322406 | MS.gene47109:CDS |
| CACAATGTCACTGCCATGGT+TGG | 0.447015 | 6.3:-16322448 | MS.gene47109:CDS |
| TGGGCAGCTAGTATAGATAA+AGG | 0.447793 | 6.3:-16320608 | MS.gene47109:CDS |
| AACATTGTTTATATGGTCAC+TGG | 0.449490 | 6.3:-16321910 | MS.gene47109:CDS |
| TCCAAGTTGTGCCATGGCAT+GGG | 0.460454 | 6.3:+16322405 | None:intergenic |
| TTGAACCAAGTACAATGCTT+CGG | 0.462834 | 6.3:-16319651 | MS.gene47109:CDS |
| AGGCATGTTGACCTAGTTCA+TGG | 0.463818 | 6.3:+16321995 | None:intergenic |
| GAGAGAAACTTACAGGTCTC+TGG | 0.467903 | 6.3:+16324083 | None:intergenic |
| GCCATTGCAATAAGCCATGC+AGG | 0.475048 | 6.3:+16320293 | None:intergenic |
| ATATTTGGAAATGAGGTTGA+TGG | 0.478200 | 6.3:-16320341 | MS.gene47109:CDS |
| TTACAGATATGCATTGTGCT+TGG | 0.491909 | 6.3:-16319078 | MS.gene47109:intron |
| ATAAACCGAAGCATTGTACT+TGG | 0.492848 | 6.3:+16319646 | None:intergenic |
| ATCCAAGTTGTGCCATGGCA+TGG | 0.497867 | 6.3:+16322404 | None:intergenic |
| TGGTGATTAGGACTTGAGTT+GGG | 0.498331 | 6.3:+16324103 | None:intergenic |
| TCATCACATTATACACACTT+TGG | 0.498785 | 6.3:-16322068 | MS.gene47109:CDS |
| GTCACTGCCATGGTTGGAGC+TGG | 0.502635 | 6.3:-16322442 | MS.gene47109:CDS |
| TTAATGATTGTATCTCCCAT+TGG | 0.503851 | 6.3:-16319048 | MS.gene47109:CDS |
| CTGGTGATTAGGACTTGAGT+TGG | 0.510641 | 6.3:+16324102 | None:intergenic |
| AAAACTAGGTCTTTATATTG+TGG | 0.515105 | 6.3:-16321965 | MS.gene47109:CDS |
| CAAGAAAATTTGGCTTGTCA+TGG | 0.522709 | 6.3:-16319211 | MS.gene47109:CDS |
| TTACTGGATATTTGGAAATG+AGG | 0.524149 | 6.3:-16320348 | MS.gene47109:CDS |
| TTTGACTTCTTTAATGCACT+TGG | 0.531478 | 6.3:-16320530 | MS.gene47109:CDS |
| CAGAAATTGAGTTGAAATCA+GGG | 0.541262 | 6.3:+16321776 | None:intergenic |
| GAAAATTTGGCTTGTCATGG+TGG | 0.542110 | 6.3:-16319208 | MS.gene47109:CDS |
| GTGTTGATGGAATTGTTGCT+TGG | 0.542367 | 6.3:+16320462 | None:intergenic |
| ATTGAAAGCCACATGATACA+TGG | 0.544147 | 6.3:+16319242 | None:intergenic |
| AATTTCTGGTGTGTCCTTGG+CGG | 0.548611 | 6.3:-16321761 | MS.gene47109:CDS |
| ACCTGCATGGCTTATTGCAA+TGG | 0.551738 | 6.3:-16320294 | MS.gene47109:CDS |
| CAGGTTTCTGTAAAGATATG+AGG | 0.552651 | 6.3:+16320312 | None:intergenic |
| TTTGATAGATACCATGAACT+AGG | 0.552729 | 6.3:-16322006 | MS.gene47109:CDS |
| AATGGTTGAGATGCATGAAA+TGG | 0.555074 | 6.3:-16322043 | MS.gene47109:CDS |
| TGTTGTTGCATACATTGTTG+TGG | 0.556512 | 6.3:-16320402 | MS.gene47109:CDS |
| CAGCTACTCTACAATTTCAT+GGG | 0.557090 | 6.3:-16320627 | MS.gene47109:CDS |
| TATAAGGCACATAGTACTGC+AGG | 0.557547 | 6.3:-16320560 | MS.gene47109:CDS |
| TGCTGGTCACAATGTGGTGT+TGG | 0.560978 | 6.3:-16320489 | MS.gene47109:CDS |
| TCCAGCTTCCATGTATCATG+TGG | 0.565464 | 6.3:-16319250 | MS.gene47109:intron |
| CCAAGTTGTGCCATGGCATG+GGG | 0.568553 | 6.3:+16322406 | None:intergenic |
| GGACATGACTGCTGCCGCCA+AGG | 0.568682 | 6.3:+16321747 | None:intergenic |
| AAAATTTGGCTTGTCATGGT+GGG | 0.574283 | 6.3:-16319207 | MS.gene47109:CDS |
| ATGCCATGGCACAACTTGGA+TGG | 0.578557 | 6.3:-16322402 | MS.gene47109:intron |
| ACAACAACTCCTCTCCACAT+TGG | 0.578846 | 6.3:+16320419 | None:intergenic |
| CACCACATTGTGACCAGCAT+AGG | 0.585356 | 6.3:+16320493 | None:intergenic |
| GAGATACAATCATTAAACAT+AGG | 0.587524 | 6.3:+16319055 | None:intergenic |
| TGACATGATTGAAACTGTGT+TGG | 0.590690 | 6.3:-16319689 | MS.gene47109:CDS |
| AGCTTGGACACACAATATCA+TGG | 0.599055 | 6.3:+16321866 | None:intergenic |
| AATGATTGTATCTCCCATTG+GGG | 0.599812 | 6.3:-16319046 | MS.gene47109:CDS |
| ATTTCTACCACAAGTTGTTG+AGG | 0.602908 | 6.3:+16321940 | None:intergenic |
| AGAATAAGTATGGTTACACC+TGG | 0.606953 | 6.3:+16322099 | None:intergenic |
| TAGAACACCAGCTCCAACCA+TGG | 0.608052 | 6.3:+16322435 | None:intergenic |
| TGCCTATGCTGGTCACAATG+TGG | 0.627066 | 6.3:-16320495 | MS.gene47109:CDS |
| TATCTTTACAGAAACCTGCA+TGG | 0.633642 | 6.3:-16320307 | MS.gene47109:CDS |
| ATACCATCCAAGTTGTGCCA+TGG | 0.633650 | 6.3:+16322399 | None:intergenic |
| ATTGTTTATATGGTCACTGG+AGG | 0.644359 | 6.3:-16321907 | MS.gene47109:CDS |
| TCCAAAGTTCCAATGTGGAG+AGG | 0.647648 | 6.3:-16320428 | MS.gene47109:CDS |
| CTAAAAGGAATGCAAAATGG+TGG | 0.654216 | 6.3:-16322483 | MS.gene47109:CDS |
| AACCATCCAAAGTTCCAATG+TGG | 0.666559 | 6.3:-16320433 | MS.gene47109:CDS |
| GGGACAAGAGAATTGATGAG+TGG | 0.673055 | 6.3:-16322519 | MS.gene47109:CDS |
| TGTGGTGCCTCAACAACTTG+TGG | 0.674045 | 6.3:-16321947 | MS.gene47109:CDS |
| GTTTCAATCATGTCAAACAC+AGG | 0.690079 | 6.3:+16319697 | None:intergenic |
| ATGATTGTATCTCCCATTGG+GGG | 0.697959 | 6.3:-16319045 | MS.gene47109:CDS |
| CAAGTTGTGCCATGGCATGG+GGG | 0.711955 | 6.3:+16322407 | None:intergenic |
| AGTAACCAATAAGAGCAACA+GGG | 0.740515 | 6.3:+16320366 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATTTTATATTAAAAAT+TGG | - | chr6.3:16319650-16319669 | MS.gene47109:CDS | 0.0% |
| !! | TTTAATAACACAAAATTAAA+TGG | + | chr6.3:16320574-16320593 | None:intergenic | 10.0% |
| !!! | AAAAATGGTTATTTATTTTA+GGG | + | chr6.3:16319343-16319362 | None:intergenic | 10.0% |
| !!! | CATATTATTTTTATGTAAAT+AGG | - | chr6.3:16320120-16320139 | MS.gene47109:intron | 10.0% |
| !!! | GATTATATTTGTTTTATTAT+TGG | + | chr6.3:16320387-16320406 | None:intergenic | 10.0% |
| !!! | TTTTTCAAATATTTTTACTT+TGG | - | chr6.3:16323574-16323593 | MS.gene47109:intron | 10.0% |
| !! | ATGAAACATATAATATAAGA+CGG | + | chr6.3:16320904-16320923 | None:intergenic | 15.0% |
| !! | TCAATATAATAAATTTCCTT+TGG | - | chr6.3:16323823-16323842 | MS.gene47109:intron | 15.0% |
| !! | TTTGATTAAAGTTATATGTA+TGG | - | chr6.3:16320319-16320338 | MS.gene47109:CDS | 15.0% |
| !!! | ATAAATAACCATTTTTGTTT+TGG | - | chr6.3:16319347-16319366 | MS.gene47109:intron | 15.0% |
| !!! | ATTCTCAAGTTATAATTTTT+TGG | - | chr6.3:16321460-16321479 | MS.gene47109:intron | 15.0% |
| !!! | CAAAAATGGTTATTTATTTT+AGG | + | chr6.3:16319344-16319363 | None:intergenic | 15.0% |
| !!! | GAATTGTATTTCATTTTAAA+TGG | + | chr6.3:16319561-16319580 | None:intergenic | 15.0% |
| !!! | TGATAATTTTAATATTCCAA+AGG | + | chr6.3:16323842-16323861 | None:intergenic | 15.0% |
| !! | AAAAAATTCTTGCAAGATTA+AGG | + | chr6.3:16320846-16320865 | None:intergenic | 20.0% |
| !! | AATGAATTAGTTCAAATGAT+AGG | + | chr6.3:16319523-16319542 | None:intergenic | 20.0% |
| !! | ACACATAATATAATATGAGA+TGG | + | chr6.3:16319586-16319605 | None:intergenic | 20.0% |
| !! | ATGAATTAGTTCAAATGATA+GGG | + | chr6.3:16319522-16319541 | None:intergenic | 20.0% |
| !! | CAAAATAAGATGCATAATAT+AGG | - | chr6.3:16319746-16319765 | MS.gene47109:intron | 20.0% |
| !! | CAACATGTTAATTTAAACTT+TGG | - | chr6.3:16322469-16322488 | MS.gene47109:CDS | 20.0% |
| !! | TCAAACTTGATTTCTAAATA+TGG | + | chr6.3:16322347-16322366 | None:intergenic | 20.0% |
| !! | TTCTTATTATATTTCTCAGT+TGG | + | chr6.3:16319710-16319729 | None:intergenic | 20.0% |
| !!! | AATAAAAGTTTTATACCTGA+AGG | + | chr6.3:16321412-16321431 | None:intergenic | 20.0% |
| !!! | ACTCTTACTTTTTTTTTGAA+AGG | + | chr6.3:16319302-16319321 | None:intergenic | 20.0% |
| !!! | AGAAATATAATAAGAAGCAT+AGG | - | chr6.3:16319714-16319733 | MS.gene47109:intron | 20.0% |
| !!! | ATATGAGTTTACTTTAAAGA+AGG | - | chr6.3:16320985-16321004 | MS.gene47109:intron | 20.0% |
| !!! | CAAGTTATAATTTTTTGGAT+CGG | - | chr6.3:16321465-16321484 | MS.gene47109:intron | 20.0% |
| !!! | CTGTTTTAAAGAAAAGTAAA+AGG | + | chr6.3:16319782-16319801 | None:intergenic | 20.0% |
| !!! | TATGAGTTTACTTTAAAGAA+GGG | - | chr6.3:16320986-16321005 | MS.gene47109:intron | 20.0% |
| !!! | TTGACTTTTAAAATGCTTTT+GGG | + | chr6.3:16319934-16319953 | None:intergenic | 20.0% |
| !!! | TTTGAAATACTACTTGAAAT+AGG | - | chr6.3:16322362-16322381 | MS.gene47109:intron | 20.0% |
| !!! | TTTGACTTTTAAAATGCTTT+TGG | + | chr6.3:16319935-16319954 | None:intergenic | 20.0% |
| !!! | TTTTTTCAAATTGAATAAGC+TGG | - | chr6.3:16322958-16322977 | MS.gene47109:intron | 20.0% |
| !!! | TTTTTTTTACAAAATATCCC+TGG | + | chr6.3:16323787-16323806 | None:intergenic | 20.0% |
| ! | AAAACTAGGTCTTTATATTG+TGG | - | chr6.3:16321170-16321189 | MS.gene47109:intron | 25.0% |
| ! | AAACATATAATATAAGACGG+AGG | + | chr6.3:16320901-16320920 | None:intergenic | 25.0% |
| ! | AGAAAAATTGGATTTGGATT+AGG | + | chr6.3:16321659-16321678 | None:intergenic | 25.0% |
| ! | AGCAAATATCATGATGAAAT+AGG | + | chr6.3:16321313-16321332 | None:intergenic | 25.0% |
| ! | ATAAGTTAAACGATCATCTT+TGG | - | chr6.3:16323177-16323196 | MS.gene47109:intron | 25.0% |
| ! | ATCTACAAACCAAGAAAATT+TGG | - | chr6.3:16323914-16323933 | MS.gene47109:intron | 25.0% |
| ! | ATGTGTATATTGACCATTTA+GGG | - | chr6.3:16323137-16323156 | MS.gene47109:intron | 25.0% |
| ! | ATTATTACGGTAAAGAGATA+AGG | - | chr6.3:16320000-16320019 | MS.gene47109:intron | 25.0% |
| ! | ATTGTACGTAATGTATATGT+TGG | - | chr6.3:16323510-16323529 | MS.gene47109:intron | 25.0% |
| ! | ATTTCTTTGTATAAGTTGTG+AGG | - | chr6.3:16320091-16320110 | MS.gene47109:intron | 25.0% |
| ! | CAAAATTTCATTCAAACACA+TGG | - | chr6.3:16320955-16320974 | MS.gene47109:intron | 25.0% |
| ! | CATTTGAACTAATTCATTGT+TGG | - | chr6.3:16319525-16319544 | MS.gene47109:intron | 25.0% |
| ! | GAGATACAATCATTAAACAT+AGG | + | chr6.3:16324083-16324102 | None:intergenic | 25.0% |
| ! | GTTAGCGAAGTAAAAAAAAA+TGG | + | chr6.3:16320257-16320276 | None:intergenic | 25.0% |
| ! | TAACACTTAGAAAACTTAGA+TGG | + | chr6.3:16320875-16320894 | None:intergenic | 25.0% |
| ! | TAACCATACTTATTCTTTCA+TGG | - | chr6.3:16321043-16321062 | MS.gene47109:intron | 25.0% |
| ! | TATGTGTATATTGACCATTT+AGG | - | chr6.3:16323136-16323155 | MS.gene47109:intron | 25.0% |
| ! | TCAACTAGAAAAATTGGATT+TGG | + | chr6.3:16321665-16321684 | None:intergenic | 25.0% |
| ! | TCTCATTCAACTAGAAAAAT+TGG | + | chr6.3:16321671-16321690 | None:intergenic | 25.0% |
| ! | TTAAGTTTCACACAAATAAC+TGG | - | chr6.3:16321573-16321592 | MS.gene47109:intron | 25.0% |
| !! | AAAACCTATCAATTTAGGTT+TGG | - | chr6.3:16322268-16322287 | MS.gene47109:intron | 25.0% |
| !! | AGTCATTAAAGTTTTTGTCA+TGG | + | chr6.3:16322420-16322439 | None:intergenic | 25.0% |
| !! | GAAGATTAGTCATCATTAAA+TGG | + | chr6.3:16319405-16319424 | None:intergenic | 25.0% |
| !! | TACTCTGAGTAATAATTTTG+AGG | + | chr6.3:16320154-16320173 | None:intergenic | 25.0% |
| !! | TGGTGTTAACATTGTTTATA+TGG | - | chr6.3:16321218-16321237 | MS.gene47109:intron | 25.0% |
| !!! | TTTGTTGTTATTCATGTGAT+TGG | - | chr6.3:16322872-16322891 | MS.gene47109:intron | 25.0% |
| AAAAATGGACAAACATGTGT+TGG | + | chr6.3:16320242-16320261 | None:intergenic | 30.0% | |
| AACATTGTGAATGCTGAAAA+GGG | + | chr6.3:16323629-16323648 | None:intergenic | 30.0% | |
| AACATTGTTTATATGGTCAC+TGG | - | chr6.3:16321225-16321244 | MS.gene47109:intron | 30.0% | |
| AAGAAAAAATGTATGGCCTA+CGG | + | chr6.3:16319828-16319847 | None:intergenic | 30.0% | |
| ACTAATAGAAAAATGTGTGC+TGG | + | chr6.3:16323241-16323260 | None:intergenic | 30.0% | |
| AGATTGAAGAAAAATCAGAG+AGG | - | chr6.3:16320595-16320614 | MS.gene47109:CDS | 30.0% | |
| AGCATAATATTTGCCCTAAA+TGG | + | chr6.3:16323153-16323172 | None:intergenic | 30.0% | |
| ATAAGGTAAAAGATATCGCA+TGG | + | chr6.3:16320409-16320428 | None:intergenic | 30.0% | |
| ATATTTGGAAATGAGGTTGA+TGG | - | chr6.3:16322794-16322813 | MS.gene47109:intron | 30.0% | |
| ATCCTAAAGTTAAACTTGGT+TGG | + | chr6.3:16320049-16320068 | None:intergenic | 30.0% | |
| ATGGCAATCCAAAACAAAAA+TGG | + | chr6.3:16319358-16319377 | None:intergenic | 30.0% | |
| ATTATACACACTTTGGCAAA+TGG | - | chr6.3:16321074-16321093 | MS.gene47109:intron | 30.0% | |
| CAATGTAGAGTATGGATATA+AGG | - | chr6.3:16322559-16322578 | MS.gene47109:intron | 30.0% | |
| CACTATCCTAAAGTTAAACT+TGG | + | chr6.3:16320053-16320072 | None:intergenic | 30.0% | |
| CATCTAAAAGGAATGCAAAA+TGG | - | chr6.3:16320649-16320668 | MS.gene47109:intron | 30.0% | |
| CGAGAAAAACCTATCAATTT+AGG | - | chr6.3:16322263-16322282 | MS.gene47109:intron | 30.0% | |
| GAAAAAAAATTATCCACTCG+AGG | + | chr6.3:16321876-16321895 | None:intergenic | 30.0% | |
| GATCCATGAAAGAATAAGTA+TGG | + | chr6.3:16321049-16321068 | None:intergenic | 30.0% | |
| GATTGAAGAAAAATCAGAGA+GGG | - | chr6.3:16320596-16320615 | MS.gene47109:CDS | 30.0% | |
| GTGTACGAAGAAAAAATGTA+TGG | + | chr6.3:16319835-16319854 | None:intergenic | 30.0% | |
| TAAGATGCATAATATAGGAC+AGG | - | chr6.3:16319751-16319770 | MS.gene47109:intron | 30.0% | |
| TAATGATTGTATCTCCCATT+GGG | - | chr6.3:16324088-16324107 | MS.gene47109:intron | 30.0% | |
| TCAAGCGTATGAAGAAAATT+TGG | + | chr6.3:16319475-16319494 | None:intergenic | 30.0% | |
| TCATCACATTATACACACTT+TGG | - | chr6.3:16321067-16321086 | MS.gene47109:intron | 30.0% | |
| TGACTTACAAAGTATGTTGT+TGG | + | chr6.3:16323716-16323735 | None:intergenic | 30.0% | |
| TTAATGATTGTATCTCCCAT+TGG | - | chr6.3:16324087-16324106 | MS.gene47109:intron | 30.0% | |
| TTACTGGATATTTGGAAATG+AGG | - | chr6.3:16322787-16322806 | MS.gene47109:intron | 30.0% | |
| TTGGAAACTGAATCACTAAA+TGG | - | chr6.3:16319005-16319024 | MS.gene47109:CDS | 30.0% | |
| TTTGATAGATACCATGAACT+AGG | - | chr6.3:16321129-16321148 | MS.gene47109:intron | 30.0% | |
| ! | AACCAACCAAGTTTAACTTT+AGG | - | chr6.3:16320044-16320063 | MS.gene47109:intron | 30.0% |
| ! | AACTTTATCTTTTTGCAGCT+TGG | + | chr6.3:16321288-16321307 | None:intergenic | 30.0% |
| ! | ATCTTTTACCTTATTGAACG+CGG | - | chr6.3:16320415-16320434 | MS.gene47109:CDS | 30.0% |
| ! | ATTTGAAACTAGCATTCAGA+CGG | - | chr6.3:16320211-16320230 | MS.gene47109:intron | 30.0% |
| ! | CTATCAATTTAGGTTTGGTT+CGG | - | chr6.3:16322273-16322292 | MS.gene47109:intron | 30.0% |
| ! | CTTATTGGTTACTGGATATT+TGG | - | chr6.3:16322779-16322798 | MS.gene47109:intron | 30.0% |
| ! | CTTTTTATCAAGTAGTCTAG+CGG | - | chr6.3:16322924-16322943 | MS.gene47109:intron | 30.0% |
| ! | GATTAGTCATCATTAAATGG+TGG | + | chr6.3:16319402-16319421 | None:intergenic | 30.0% |
| ! | GCATTCCTTTTAGATGTAAT+TGG | + | chr6.3:16320645-16320664 | None:intergenic | 30.0% |
| ! | TATCTATCAAAACGTTTTCC+TGG | + | chr6.3:16321120-16321139 | None:intergenic | 30.0% |
| ! | TTTGACTTCTTTAATGCACT+TGG | - | chr6.3:16322605-16322624 | MS.gene47109:intron | 30.0% |
| ! | TTTTCCCCGATTTCAAAATA+CGG | + | chr6.3:16322214-16322233 | None:intergenic | 30.0% |
| !! | CAGAAATTGAGTTGAAATCA+GGG | + | chr6.3:16321362-16321381 | None:intergenic | 30.0% |
| !! | TTAAAATGCTTTTGGGTCAA+TGG | + | chr6.3:16319927-16319946 | None:intergenic | 30.0% |
| !!! | AGTTTTTTTTTGTCGCACAT+AGG | - | chr6.3:16323098-16323117 | MS.gene47109:intron | 30.0% |
| !!! | ATGTACCGTATTTTGAAATC+GGG | - | chr6.3:16322206-16322225 | MS.gene47109:intron | 30.0% |
| !!! | ATTACATTCCCTTTTTTCGA+TGG | - | chr6.3:16323656-16323675 | MS.gene47109:intron | 30.0% |
| !!! | ATTTTTGTTTTGGATTGCCA+TGG | - | chr6.3:16319357-16319376 | MS.gene47109:intron | 30.0% |
| !!! | CATGTACCGTATTTTGAAAT+CGG | - | chr6.3:16322205-16322224 | MS.gene47109:intron | 30.0% |
| !!! | TGATTTTTTACATTCGAGAC+TGG | - | chr6.3:16322137-16322156 | MS.gene47109:intron | 30.0% |
| AAAAATTATCCACTCGAGGA+CGG | + | chr6.3:16321872-16321891 | None:intergenic | 35.0% | |
| AAACGAGACAATGTAGAGTA+TGG | - | chr6.3:16322551-16322570 | MS.gene47109:intron | 35.0% | |
| AAACGATCATCTTTGGTATG+AGG | - | chr6.3:16323184-16323203 | MS.gene47109:intron | 35.0% | |
| AAAGAGATGATATCGATCAG+TGG | - | chr6.3:16321953-16321972 | MS.gene47109:CDS | 35.0% | |
| AATGATTGTATCTCCCATTG+GGG | - | chr6.3:16324089-16324108 | MS.gene47109:intron | 35.0% | |
| AATGGTTGAGATGCATGAAA+TGG | - | chr6.3:16321092-16321111 | MS.gene47109:intron | 35.0% | |
| AATTGAATAAGCTGGATGTC+CGG | - | chr6.3:16322966-16322985 | MS.gene47109:intron | 35.0% | |
| ACAGCTACTCTACAATTTCA+TGG | - | chr6.3:16322507-16322526 | MS.gene47109:CDS | 35.0% | |
| ACTAAGTTTGGGTATGTGAT+TGG | + | chr6.3:16322238-16322257 | None:intergenic | 35.0% | |
| AGAAAAAATGTATGGCCTAC+GGG | + | chr6.3:16319827-16319846 | None:intergenic | 35.0% | |
| AGAAAATTTGGCTGGAAAGA+TGG | + | chr6.3:16319463-16319482 | None:intergenic | 35.0% | |
| AGAATAAGTATGGTTACACC+TGG | + | chr6.3:16321039-16321058 | None:intergenic | 35.0% | |
| AGCATATACCTAAACACGTT+GGG | + | chr6.3:16321849-16321868 | None:intergenic | 35.0% | |
| AGTAACCAATAAGAGCAACA+GGG | + | chr6.3:16322772-16322791 | None:intergenic | 35.0% | |
| AGTTCAAATGATAGGGAACT+TGG | + | chr6.3:16319515-16319534 | None:intergenic | 35.0% | |
| ATGCATTAAAACATTGAGCC+AGG | + | chr6.3:16321925-16321944 | None:intergenic | 35.0% | |
| ATTGAAAGCCACATGATACA+TGG | + | chr6.3:16323896-16323915 | None:intergenic | 35.0% | |
| ATTGTTTATATGGTCACTGG+AGG | - | chr6.3:16321228-16321247 | MS.gene47109:intron | 35.0% | |
| ATTTCTACCACAAGTTGTTG+AGG | + | chr6.3:16321198-16321217 | None:intergenic | 35.0% | |
| CAACAACTTGTGGTAGAAAT+TGG | - | chr6.3:16321198-16321217 | MS.gene47109:intron | 35.0% | |
| CAGCTACTCTACAATTTCAT+GGG | - | chr6.3:16322508-16322527 | MS.gene47109:CDS | 35.0% | |
| CAGGTTTCTGTAAAGATATG+AGG | + | chr6.3:16322826-16322845 | None:intergenic | 35.0% | |
| CCTGATTTCAACTCAATTTC+TGG | - | chr6.3:16321360-16321379 | MS.gene47109:intron | 35.0% | |
| CGAACCAAACCTAAATTGAT+AGG | + | chr6.3:16322275-16322294 | None:intergenic | 35.0% | |
| CTAAAAGGAATGCAAAATGG+TGG | - | chr6.3:16320652-16320671 | MS.gene47109:intron | 35.0% | |
| GAAACTTCATACCAATACCA+TGG | + | chr6.3:16319377-16319396 | None:intergenic | 35.0% | |
| GAACATTGTGAATGCTGAAA+AGG | + | chr6.3:16323630-16323649 | None:intergenic | 35.0% | |
| GATGATTGAGAGAAACTTAC+AGG | + | chr6.3:16319062-16319081 | None:intergenic | 35.0% | |
| GGCTTCCAATTACATCTAAA+AGG | - | chr6.3:16320637-16320656 | MS.gene47109:intron | 35.0% | |
| GTTCAAATGATAGGGAACTT+GGG | + | chr6.3:16319514-16319533 | None:intergenic | 35.0% | |
| GTTTCAATCATGTCAAACAC+AGG | + | chr6.3:16323441-16323460 | None:intergenic | 35.0% | |
| TAAGAATACCGCGTTCAATA+AGG | + | chr6.3:16320426-16320445 | None:intergenic | 35.0% | |
| TATCTTTACAGAAACCTGCA+TGG | - | chr6.3:16322828-16322847 | MS.gene47109:intron | 35.0% | |
| TCATGTGATTGGAAGTTATC+AGG | - | chr6.3:16322883-16322902 | MS.gene47109:intron | 35.0% | |
| TGACATGATTGAAACTGTGT+TGG | - | chr6.3:16323446-16323465 | MS.gene47109:intron | 35.0% | |
| TGTTGTTGCATACATTGTTG+TGG | - | chr6.3:16322733-16322752 | MS.gene47109:intron | 35.0% | |
| TTACAGATATGCATTGTGCT+TGG | - | chr6.3:16324057-16324076 | MS.gene47109:intron | 35.0% | |
| TTCCCTTAATGTATTGTGCA+GGG | - | chr6.3:16321011-16321030 | MS.gene47109:intron | 35.0% | |
| TTCTCGCTTTGACTAAGTTT+GGG | + | chr6.3:16322249-16322268 | None:intergenic | 35.0% | |
| TTGAACCAAGTACAATGCTT+CGG | - | chr6.3:16323484-16323503 | MS.gene47109:intron | 35.0% | |
| TTTCCCTTAATGTATTGTGC+AGG | - | chr6.3:16321010-16321029 | MS.gene47109:intron | 35.0% | |
| TTTCTCGCTTTGACTAAGTT+TGG | + | chr6.3:16322250-16322269 | None:intergenic | 35.0% | |
| ! | AACTTGGTTGGTTGACATTA+AGG | + | chr6.3:16320037-16320056 | None:intergenic | 35.0% |
| ! | CATGACAAGCCAAATTTTCT+TGG | + | chr6.3:16323926-16323945 | None:intergenic | 35.0% |
| !! | AAAATTTGGCTTGTCATGGT+GGG | - | chr6.3:16323928-16323947 | MS.gene47109:intron | 35.0% |
| !! | ATAAACCGAAGCATTGTACT+TGG | + | chr6.3:16323492-16323511 | None:intergenic | 35.0% |
| !! | ATTCGAGACTGGTTTAGATA+TGG | - | chr6.3:16322148-16322167 | MS.gene47109:intron | 35.0% |
| !! | CAAGAAAATTTGGCTTGTCA+TGG | - | chr6.3:16323924-16323943 | MS.gene47109:intron | 35.0% |
| !! | CCAGAAATTGAGTTGAAATC+AGG | + | chr6.3:16321363-16321382 | None:intergenic | 35.0% |
| !! | TTCGAGACTGGTTTAGATAT+GGG | - | chr6.3:16322149-16322168 | MS.gene47109:intron | 35.0% |
| !!! | AAGACCTAGTTTTTTCCCAA+AGG | + | chr6.3:16321163-16321182 | None:intergenic | 35.0% |
| !!! | TGTACCGTATTTTGAAATCG+GGG | - | chr6.3:16322207-16322226 | MS.gene47109:intron | 35.0% |
| AACCATCCAAAGTTCCAATG+TGG | - | chr6.3:16322702-16322721 | MS.gene47109:intron | 40.0% | |
| AACTAGGTCAACATGCCTTT+GGG | - | chr6.3:16321145-16321164 | MS.gene47109:intron | 40.0% | |
| ACATGCATTGCTATATGCAG+GGG | + | chr6.3:16323006-16323025 | None:intergenic | 40.0% | |
| ACCCCTGCACAATACATTAA+GGG | + | chr6.3:16321016-16321035 | None:intergenic | 40.0% | |
| ACCCTCCAAAAAATCCTAGA+AGG | + | chr6.3:16323682-16323701 | None:intergenic | 40.0% | |
| ACGAAGATTGCACGACTATT+AGG | - | chr6.3:16321699-16321718 | MS.gene47109:intron | 40.0% | |
| ACGGTACATGACGTGTAATA+GGG | + | chr6.3:16322195-16322214 | None:intergenic | 40.0% | |
| AGCTTGGACACACAATATCA+TGG | + | chr6.3:16321272-16321291 | None:intergenic | 40.0% | |
| ATGATATCGATCAGTGGCTA+TGG | - | chr6.3:16321959-16321978 | MS.gene47109:CDS | 40.0% | |
| ATGATTGTATCTCCCATTGG+GGG | - | chr6.3:16324090-16324109 | MS.gene47109:intron | 40.0% | |
| ATTGAATAAGCTGGATGTCC+GGG | - | chr6.3:16322967-16322986 | MS.gene47109:intron | 40.0% | |
| CACGGAGACATGTTTCTTTA+TGG | - | chr6.3:16323047-16323066 | MS.gene47109:intron | 40.0% | |
| CAGTAACCAATAAGAGCAAC+AGG | + | chr6.3:16322773-16322792 | None:intergenic | 40.0% | |
| CTAGAAGGCCATCGAAAAAA+GGG | + | chr6.3:16323667-16323686 | None:intergenic | 40.0% | |
| GACATGCATTGCTATATGCA+GGG | + | chr6.3:16323007-16323026 | None:intergenic | 40.0% | |
| GACTTTGTTGCCATGTCTAA+CGG | - | chr6.3:16322314-16322333 | MS.gene47109:intron | 40.0% | |
| GAGCATATACCTAAACACGT+TGG | + | chr6.3:16321850-16321869 | None:intergenic | 40.0% | |
| GATCGATATCATCTCTTTGC+TGG | + | chr6.3:16321951-16321970 | None:intergenic | 40.0% | |
| GCATATACCTAAACACGTTG+GGG | + | chr6.3:16321848-16321867 | None:intergenic | 40.0% | |
| GCGTATGAAGAAAATTTGGC+TGG | + | chr6.3:16319471-16319490 | None:intergenic | 40.0% | |
| GCTCATGCTACAATGCAATT+TGG | + | chr6.3:16320776-16320795 | None:intergenic | 40.0% | |
| TACCAACTGAGCTACACTTA+CGG | + | chr6.3:16323760-16323779 | None:intergenic | 40.0% | |
| TACGGTACATGACGTGTAAT+AGG | + | chr6.3:16322196-16322215 | None:intergenic | 40.0% | |
| TACTTCCCTGTTGCTCTTAT+TGG | - | chr6.3:16322764-16322783 | MS.gene47109:intron | 40.0% | |
| TATAAGGCACATAGTACTGC+AGG | - | chr6.3:16322575-16322594 | MS.gene47109:intron | 40.0% | |
| TCCCTTAATGTATTGTGCAG+GGG | - | chr6.3:16321012-16321031 | MS.gene47109:intron | 40.0% | |
| TGGGCAGCTAGTATAGATAA+AGG | - | chr6.3:16322527-16322546 | MS.gene47109:CDS | 40.0% | |
| TGGTATACAACCGTTAGACA+TGG | + | chr6.3:16322327-16322346 | None:intergenic | 40.0% | |
| TGGTGATTAGGACTTGAGTT+GGG | + | chr6.3:16319035-16319054 | None:intergenic | 40.0% | |
| TTCGTACACTTGCCTTGTAA+CGG | - | chr6.3:16319846-16319865 | MS.gene47109:intron | 40.0% | |
| ! | AACTCTTTGAGAGTAGGGTA+TGG | + | chr6.3:16321770-16321789 | None:intergenic | 40.0% |
| ! | ACTCTTTGAGAGTAGGGTAT+GGG | + | chr6.3:16321769-16321788 | None:intergenic | 40.0% |
| ! | CATGCCTTTGGGAAAAAACT+AGG | - | chr6.3:16321156-16321175 | MS.gene47109:intron | 40.0% |
| ! | CTCTAGTTTCTTCCGTTACA+AGG | + | chr6.3:16319861-16319880 | None:intergenic | 40.0% |
| ! | CTGTTGCTCTTATTGGTTAC+TGG | - | chr6.3:16322771-16322790 | MS.gene47109:intron | 40.0% |
| ! | GTGTTGATGGAATTGTTGCT+TGG | + | chr6.3:16322676-16322695 | None:intergenic | 40.0% |
| ! | TTTTCACAATGTCACTGCCA+TGG | - | chr6.3:16320683-16320702 | MS.gene47109:intron | 40.0% |
| !! | ACTATTGCTTTTGCCTATGC+TGG | - | chr6.3:16322629-16322648 | MS.gene47109:intron | 40.0% |
| !! | GAAAATTTGGCTTGTCATGG+TGG | - | chr6.3:16323927-16323946 | MS.gene47109:intron | 40.0% |
| !! | GACTGGTTTAGATATGGGTT+CGG | - | chr6.3:16322154-16322173 | MS.gene47109:intron | 40.0% |
| !! | GTTTTGGATTGCCATGGTAT+TGG | - | chr6.3:16319363-16319382 | MS.gene47109:intron | 40.0% |
| !!! | GATGGCCTTCTAGGATTTTT+TGG | - | chr6.3:16323674-16323693 | MS.gene47109:intron | 40.0% |
| !!! | GCCTTCTAGGATTTTTTGGA+GGG | - | chr6.3:16323678-16323697 | MS.gene47109:intron | 40.0% |
| AACATATCAGTGTGTCCCGT+AGG | - | chr6.3:16319809-16319828 | MS.gene47109:intron | 45.0% | |
| ACAACAACTCCTCTCCACAT+TGG | + | chr6.3:16322719-16322738 | None:intergenic | 45.0% | |
| ACCAACTGAGCTACACTTAC+GGG | + | chr6.3:16323759-16323778 | None:intergenic | 45.0% | |
| ACCTGCATGGCTTATTGCAA+TGG | - | chr6.3:16322841-16322860 | MS.gene47109:intron | 45.0% | |
| AGGCATGTTGACCTAGTTCA+TGG | + | chr6.3:16321143-16321162 | None:intergenic | 45.0% | |
| ATACCATCCAAGTTGTGCCA+TGG | + | chr6.3:16320739-16320758 | None:intergenic | 45.0% | |
| ATACCTAAACACGTTGGGGA+CGG | + | chr6.3:16321844-16321863 | None:intergenic | 45.0% | |
| ATTAGGCTTGGCAATAGGAC+AGG | - | chr6.3:16321716-16321735 | MS.gene47109:intron | 45.0% | |
| ATTGCTATATGCAGGGGTTG+AGG | + | chr6.3:16323000-16323019 | None:intergenic | 45.0% | |
| ATTGTCCTCAATCCCCCAAT+GGG | + | chr6.3:16324105-16324124 | None:intergenic | 45.0% | |
| CCTAGAAGGCCATCGAAAAA+AGG | + | chr6.3:16323668-16323687 | None:intergenic | 45.0% | |
| CGACTATTAGGCTTGGCAAT+AGG | - | chr6.3:16321711-16321730 | MS.gene47109:intron | 45.0% | |
| CTCCACATTGGAACTTTGGA+TGG | + | chr6.3:16322707-16322726 | None:intergenic | 45.0% | |
| CTGGTGATTAGGACTTGAGT+TGG | + | chr6.3:16319036-16319055 | None:intergenic | 45.0% | |
| CTTACAGGTCTCTGGTGATT+AGG | + | chr6.3:16319047-16319066 | None:intergenic | 45.0% | |
| GAACTAGGTCAACATGCCTT+TGG | - | chr6.3:16321144-16321163 | MS.gene47109:intron | 45.0% | |
| GACCCCTGCACAATACATTA+AGG | + | chr6.3:16321017-16321036 | None:intergenic | 45.0% | |
| GAGAGAAACTTACAGGTCTC+TGG | + | chr6.3:16319055-16319074 | None:intergenic | 45.0% | |
| GAGATGCATGAAATGGTTCC+AGG | - | chr6.3:16321099-16321118 | MS.gene47109:intron | 45.0% | |
| GATTGCACGACTATTAGGCT+TGG | - | chr6.3:16321704-16321723 | MS.gene47109:intron | 45.0% | |
| GGAACTTTGGATGGTTTCTC+AGG | + | chr6.3:16322698-16322717 | None:intergenic | 45.0% | |
| GGACATGCATTGCTATATGC+AGG | + | chr6.3:16323008-16323027 | None:intergenic | 45.0% | |
| GGGACAAGAGAATTGATGAG+TGG | - | chr6.3:16320616-16320635 | MS.gene47109:CDS | 45.0% | |
| GTTACCCTACCCATACTCAA+CGG | - | chr6.3:16321795-16321814 | MS.gene47109:CDS | 45.0% | |
| TCCAAAGTTCCAATGTGGAG+AGG | - | chr6.3:16322707-16322726 | MS.gene47109:intron | 45.0% | |
| TCCAGCTTCCATGTATCATG+TGG | - | chr6.3:16323885-16323904 | MS.gene47109:intron | 45.0% | |
| TCCTCTCCACATTGGAACTT+TGG | + | chr6.3:16322711-16322730 | None:intergenic | 45.0% | |
| TTACCCTACCCATACTCAAC+GGG | - | chr6.3:16321796-16321815 | MS.gene47109:CDS | 45.0% | |
| TTAGGCTTGGCAATAGGACA+GGG | - | chr6.3:16321717-16321736 | MS.gene47109:intron | 45.0% | |
| TTCTCATCCCCGTTGAGTAT+GGG | + | chr6.3:16321807-16321826 | None:intergenic | 45.0% | |
| TTGAATAAGCTGGATGTCCG+GGG | - | chr6.3:16322968-16322987 | MS.gene47109:intron | 45.0% | |
| TTTAGATATGGGTTCGGCGT+GGG | - | chr6.3:16322160-16322179 | MS.gene47109:intron | 45.0% | |
| TTTCTCATCCCCGTTGAGTA+TGG | + | chr6.3:16321808-16321827 | None:intergenic | 45.0% | |
| ! | AGCGATCTTCATCGCTGATT+TGG | - | chr6.3:16321527-16321546 | MS.gene47109:intron | 45.0% |
| ! | CTCTTTGAGAGTAGGGTATG+GGG | + | chr6.3:16321768-16321787 | None:intergenic | 45.0% |
| ! | GAGCGAACTCTTTGAGAGTA+GGG | + | chr6.3:16321775-16321794 | None:intergenic | 45.0% |
| !! | AATTTCTGGTGTGTCCTTGG+CGG | - | chr6.3:16321374-16321393 | MS.gene47109:intron | 45.0% |
| !! | CTCAATTTCTGGTGTGTCCT+TGG | - | chr6.3:16321371-16321390 | MS.gene47109:intron | 45.0% |
| !! | CTTGTCATGGTGGGCTAATT+GGG | - | chr6.3:16323937-16323956 | MS.gene47109:intron | 45.0% |
| !! | GATGGTTTCTCAGGTGTTGA+TGG | + | chr6.3:16322689-16322708 | None:intergenic | 45.0% |
| !!! | CCTTTTTTCGATGGCCTTCT+AGG | - | chr6.3:16323665-16323684 | MS.gene47109:intron | 45.0% |
| !!! | GGCCTTCTAGGATTTTTTGG+AGG | - | chr6.3:16323677-16323696 | MS.gene47109:intron | 45.0% |
| !!! | AAGTTTTTATTTATATAAAA+GGG | - | chr6.3:16322105-16322124 | MS.gene47109:CDS | 5.0% |
| !!! | AATTTTAGAAATTATTATTA+CGG | - | chr6.3:16319987-16320006 | MS.gene47109:intron | 5.0% |
| !!! | TAAGTTTTTATTTATATAAA+AGG | - | chr6.3:16322104-16322123 | MS.gene47109:CDS | 5.0% |
| AATGTATTGTGCAGGGGTCC+AGG | - | chr6.3:16321018-16321037 | MS.gene47109:intron | 50.0% | |
| ATCCAAGTTGTGCCATGGCA+TGG | + | chr6.3:16320734-16320753 | None:intergenic | 50.0% | |
| ATCCCCGTTGAGTATGGGTA+GGG | + | chr6.3:16321802-16321821 | None:intergenic | 50.0% | |
| ATCTCTCGACTCAGATCGAG+CGG | - | chr6.3:16321600-16321619 | MS.gene47109:intron | 50.0% | |
| ATGCCATGGCACAACTTGGA+TGG | - | chr6.3:16320733-16320752 | MS.gene47109:intron | 50.0% | |
| ATGGAGAAGAGTGAGACCGA+GGG | - | chr6.3:16321984-16322003 | MS.gene47109:CDS | 50.0% | |
| ATGGTTGGAGCTGGTGTTCT+AGG | - | chr6.3:16320702-16320721 | MS.gene47109:intron | 50.0% | |
| CACAATGTCACTGCCATGGT+TGG | - | chr6.3:16320687-16320706 | MS.gene47109:intron | 50.0% | |
| CACCACATTGTGACCAGCAT+AGG | + | chr6.3:16322645-16322664 | None:intergenic | 50.0% | |
| GATTGTCCTCAATCCCCCAA+TGG | + | chr6.3:16324106-16324125 | None:intergenic | 50.0% | |
| GCAACAAAGTCCATACCCGT+GGG | + | chr6.3:16322305-16322324 | None:intergenic | 50.0% | |
| GCCACATGATACATGGAAGC+TGG | + | chr6.3:16323889-16323908 | None:intergenic | 50.0% | |
| GCCATTGCAATAAGCCATGC+AGG | + | chr6.3:16322845-16322864 | None:intergenic | 50.0% | |
| GTTTAGATATGGGTTCGGCG+TGG | - | chr6.3:16322159-16322178 | MS.gene47109:intron | 50.0% | |
| TAAAACATTGAGCCAGGCGC+TGG | + | chr6.3:16321919-16321938 | None:intergenic | 50.0% | |
| TACCCTACCCATACTCAACG+GGG | - | chr6.3:16321797-16321816 | MS.gene47109:CDS | 50.0% | |
| TACCTAAACACGTTGGGGAC+GGG | + | chr6.3:16321843-16321862 | None:intergenic | 50.0% | |
| TAGAACACCAGCTCCAACCA+TGG | + | chr6.3:16320703-16320722 | None:intergenic | 50.0% | |
| TATCTCCCATTGGGGGATTG+AGG | - | chr6.3:16324097-16324116 | MS.gene47109:CDS | 50.0% | |
| TCCAAGTTGTGCCATGGCAT+GGG | + | chr6.3:16320733-16320752 | None:intergenic | 50.0% | |
| TCCCGTAAGTGTAGCTCAGT+TGG | - | chr6.3:16323755-16323774 | MS.gene47109:intron | 50.0% | |
| TCGATCAGTGGCTATGGTGA+TGG | - | chr6.3:16321965-16321984 | MS.gene47109:CDS | 50.0% | |
| TGAGCATAGCTCAGTTGGCA+AGG | + | chr6.3:16323029-16323048 | None:intergenic | 50.0% | |
| TGCCAACTGAGCTATGCTCA+CGG | - | chr6.3:16323029-16323048 | MS.gene47109:intron | 50.0% | |
| TGCCTATGCTGGTCACAATG+TGG | - | chr6.3:16322640-16322659 | MS.gene47109:intron | 50.0% | |
| TGCTGGTCACAATGTGGTGT+TGG | - | chr6.3:16322646-16322665 | MS.gene47109:intron | 50.0% | |
| TGTGGTGCCTCAACAACTTG+TGG | - | chr6.3:16321188-16321207 | MS.gene47109:intron | 50.0% | |
| TTGAGAGTAGGGTATGGGGA+CGG | + | chr6.3:16321764-16321783 | None:intergenic | 50.0% | |
| ! | CGAGCGAACTCTTTGAGAGT+AGG | + | chr6.3:16321776-16321795 | None:intergenic | 50.0% |
| !! | AAGAAGTACTTTCCAGCGCC+TGG | - | chr6.3:16321904-16321923 | MS.gene47109:CDS | 50.0% |
| !! | AGCTCAGTTGGTAGCTACCA+GGG | - | chr6.3:16323767-16323786 | MS.gene47109:intron | 50.0% |
| !! | GCTTGTCATGGTGGGCTAAT+TGG | - | chr6.3:16323936-16323955 | MS.gene47109:intron | 50.0% |
| !! | TAGCTCAGTTGGTAGCTACC+AGG | - | chr6.3:16323766-16323785 | MS.gene47109:intron | 50.0% |
| !! | TTTGGTTCGGACAGTACCCA+CGG | - | chr6.3:16322286-16322305 | MS.gene47109:intron | 50.0% |
| ACCTAAACACGTTGGGGACG+GGG | + | chr6.3:16321842-16321861 | None:intergenic | 55.0% | |
| AGGGGTTGAGGTTTGAACCC+CGG | + | chr6.3:16322988-16323007 | None:intergenic | 55.0% | |
| CAAGTTGTGCCATGGCATGG+GGG | + | chr6.3:16320731-16320750 | None:intergenic | 55.0% | |
| CATCCCCGTTGAGTATGGGT+AGG | + | chr6.3:16321803-16321822 | None:intergenic | 55.0% | |
| CCAAGTTGTGCCATGGCATG+GGG | + | chr6.3:16320732-16320751 | None:intergenic | 55.0% | |
| CCTTCCACATCTCACACCCT+CGG | + | chr6.3:16322003-16322022 | None:intergenic | 55.0% | |
| CTCCGTGAGCATAGCTCAGT+TGG | + | chr6.3:16323034-16323053 | None:intergenic | 55.0% | |
| CTTGGCAATAGGACAGGGTG+GGG | - | chr6.3:16321722-16321741 | MS.gene47109:intron | 55.0% | |
| GATGGAGAAGAGTGAGACCG+AGG | - | chr6.3:16321983-16322002 | MS.gene47109:CDS | 55.0% | |
| GCTTGGCAATAGGACAGGGT+GGG | - | chr6.3:16321721-16321740 | MS.gene47109:intron | 55.0% | |
| GGCAACAAAGTCCATACCCG+TGG | + | chr6.3:16322306-16322325 | None:intergenic | 55.0% | |
| GTATATGCTCCGTCCTCGAG+TGG | - | chr6.3:16321860-16321879 | MS.gene47109:CDS | 55.0% | |
| TGAGAGTAGGGTATGGGGAC+GGG | + | chr6.3:16321763-16321782 | None:intergenic | 55.0% | |
| !! | TTGGTTCGGACAGTACCCAC+GGG | - | chr6.3:16322287-16322306 | MS.gene47109:intron | 55.0% |
| CAATAGGACAGGGTGGGGAC+AGG | - | chr6.3:16321727-16321746 | MS.gene47109:intron | 60.0% | |
| CCCCATGCCATGGCACAACT+TGG | - | chr6.3:16320729-16320748 | MS.gene47109:intron | 60.0% | |
| CGGCAGCAGTCATGTCCTTC+AGG | - | chr6.3:16321394-16321413 | MS.gene47109:intron | 60.0% | |
| GAGAGTAGGGTATGGGGACG+GGG | + | chr6.3:16321762-16321781 | None:intergenic | 60.0% | |
| GGCTTGGCAATAGGACAGGG+TGG | - | chr6.3:16321720-16321739 | MS.gene47109:intron | 60.0% | |
| GTCACTGCCATGGTTGGAGC+TGG | - | chr6.3:16320693-16320712 | MS.gene47109:intron | 60.0% | |
| TCCCCGTCCCCAACGTGTTT+AGG | - | chr6.3:16321838-16321857 | MS.gene47109:CDS | 60.0% | |
| TCGGACAGTACCCACGGGTA+TGG | - | chr6.3:16322292-16322311 | MS.gene47109:intron | 60.0% | |
| TCTAGGTCTCCCCCATGCCA+TGG | - | chr6.3:16320719-16320738 | MS.gene47109:intron | 60.0% | |
| ! | CCGAGGGTGTGAGATGTGGA+AGG | - | chr6.3:16322000-16322019 | MS.gene47109:CDS | 60.0% |
| ! | GAGACCGAGGGTGTGAGATG+TGG | - | chr6.3:16321996-16322015 | MS.gene47109:CDS | 60.0% |
| GGACATGACTGCTGCCGCCA+AGG | + | chr6.3:16321391-16321410 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 16318996 | 16324161 | 16318996 | ID=MS.gene47109 |
| chr6.3 | mRNA | 16318996 | 16324161 | 16318996 | ID=MS.gene47109.t1;Parent=MS.gene47109 |
| chr6.3 | exon | 16324096 | 16324161 | 16324096 | ID=MS.gene47109.t1.exon1;Parent=MS.gene47109.t1 |
| chr6.3 | CDS | 16324096 | 16324161 | 16324096 | ID=cds.MS.gene47109.t1;Parent=MS.gene47109.t1 |
| chr6.3 | exon | 16322403 | 16322560 | 16322403 | ID=MS.gene47109.t1.exon2;Parent=MS.gene47109.t1 |
| chr6.3 | CDS | 16322403 | 16322560 | 16322403 | ID=cds.MS.gene47109.t1;Parent=MS.gene47109.t1 |
| chr6.3 | exon | 16321742 | 16322125 | 16321742 | ID=MS.gene47109.t1.exon3;Parent=MS.gene47109.t1 |
| chr6.3 | CDS | 16321742 | 16322125 | 16321742 | ID=cds.MS.gene47109.t1;Parent=MS.gene47109.t1 |
| chr6.3 | exon | 16320253 | 16320646 | 16320253 | ID=MS.gene47109.t1.exon4;Parent=MS.gene47109.t1 |
| chr6.3 | CDS | 16320253 | 16320646 | 16320253 | ID=cds.MS.gene47109.t1;Parent=MS.gene47109.t1 |
| chr6.3 | exon | 16319626 | 16319731 | 16319626 | ID=MS.gene47109.t1.exon5;Parent=MS.gene47109.t1 |
| chr6.3 | CDS | 16319626 | 16319731 | 16319626 | ID=cds.MS.gene47109.t1;Parent=MS.gene47109.t1 |
| chr6.3 | exon | 16319430 | 16319521 | 16319430 | ID=MS.gene47109.t1.exon6;Parent=MS.gene47109.t1 |
| chr6.3 | CDS | 16319430 | 16319521 | 16319430 | ID=cds.MS.gene47109.t1;Parent=MS.gene47109.t1 |
| chr6.3 | exon | 16319199 | 16319267 | 16319199 | ID=MS.gene47109.t1.exon7;Parent=MS.gene47109.t1 |
| chr6.3 | CDS | 16319199 | 16319267 | 16319199 | ID=cds.MS.gene47109.t1;Parent=MS.gene47109.t1 |
| chr6.3 | exon | 16318996 | 16319094 | 16318996 | ID=MS.gene47109.t1.exon8;Parent=MS.gene47109.t1 |
| chr6.3 | CDS | 16318996 | 16319094 | 16318996 | ID=cds.MS.gene47109.t1;Parent=MS.gene47109.t1 |
| Gene Sequence |
| Protein sequence |
