Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053826.t1 | XP_003614608.1 | 95.2 | 294 | 14 | 0 | 1 | 294 | 1 | 294 | 1.30E-164 | 589 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053826.t1 | Q9C9G4 | 59.2 | 287 | 112 | 4 | 2 | 286 | 6 | 289 | 8.1e-96 | 351.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053826.t1 | G7K0J7 | 95.2 | 294 | 14 | 0 | 1 | 294 | 1 | 294 | 9.0e-165 | 589.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050381 | MS.gene053826 | 0.820088 | 8.25E-53 | -1.69E-46 |
| MS.gene050467 | MS.gene053826 | 0.811478 | 6.86E-51 | -1.69E-46 |
| MS.gene050532 | MS.gene053826 | 0.814262 | 1.68E-51 | -1.69E-46 |
| MS.gene050883 | MS.gene053826 | 0.862668 | 4.31E-64 | -1.69E-46 |
| MS.gene051127 | MS.gene053826 | 0.806386 | 8.43E-50 | -1.69E-46 |
| MS.gene051946 | MS.gene053826 | 0.815476 | 9.07E-52 | -1.69E-46 |
| MS.gene053420 | MS.gene053826 | 0.806042 | 9.97E-50 | -1.69E-46 |
| MS.gene053549 | MS.gene053826 | 0.819648 | 1.04E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene055549 | 0.809135 | 2.20E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene055550 | 0.810868 | 9.31E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene055551 | 0.823074 | 1.68E-53 | -1.69E-46 |
| MS.gene053826 | MS.gene056310 | 0.852399 | 4.74E-61 | -1.69E-46 |
| MS.gene053826 | MS.gene056311 | 0.845666 | 3.52E-59 | -1.69E-46 |
| MS.gene053826 | MS.gene056408 | 0.802345 | 5.86E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene056530 | 0.808077 | 3.70E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene057014 | 0.830261 | 3.24E-55 | -1.69E-46 |
| MS.gene053826 | MS.gene05726 | 0.811097 | 8.30E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene057499 | 0.801099 | 1.06E-48 | -1.69E-46 |
| MS.gene053826 | MS.gene058109 | 0.809821 | 1.57E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene058111 | 0.828885 | 7.01E-55 | -1.69E-46 |
| MS.gene053826 | MS.gene058171 | 0.835922 | 1.27E-56 | -1.69E-46 |
| MS.gene053826 | MS.gene058173 | 0.830222 | 3.32E-55 | -1.69E-46 |
| MS.gene053826 | MS.gene058175 | 0.829127 | 6.12E-55 | -1.69E-46 |
| MS.gene053826 | MS.gene058493 | 0.828139 | 1.06E-54 | -1.69E-46 |
| MS.gene053826 | MS.gene058494 | 0.829371 | 5.35E-55 | -1.69E-46 |
| MS.gene053826 | MS.gene058628 | 0.820051 | 8.41E-53 | -1.69E-46 |
| MS.gene053826 | MS.gene058629 | 0.817703 | 2.87E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene058630 | 0.828878 | 7.04E-55 | -1.69E-46 |
| MS.gene053826 | MS.gene059223 | 0.801968 | 7.01E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene060187 | 0.803099 | 4.10E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene060595 | 0.820118 | 8.12E-53 | -1.69E-46 |
| MS.gene053826 | MS.gene060778 | -0.800062 | 1.72E-48 | -1.69E-46 |
| MS.gene053826 | MS.gene061798 | 0.830008 | 3.74E-55 | -1.69E-46 |
| MS.gene053826 | MS.gene062071 | 0.832205 | 1.08E-55 | -1.69E-46 |
| MS.gene053826 | MS.gene062769 | 0.816152 | 6.41E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene062923 | -0.806235 | 9.08E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene062925 | -0.80728 | 5.46E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene063146 | 0.816803 | 4.58E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene063410 | -0.803619 | 3.20E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene063874 | 0.807177 | 5.74E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene064796 | 0.812936 | 3.30E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene065087 | 0.800322 | 1.52E-48 | -1.69E-46 |
| MS.gene053826 | MS.gene065465 | 0.847859 | 8.86E-60 | -1.69E-46 |
| MS.gene053826 | MS.gene066022 | 0.816201 | 6.25E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene067363 | 0.806416 | 8.31E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene068917 | 0.810714 | 1.00E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene069874 | 0.811055 | 8.48E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene07004 | 0.807272 | 5.48E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene071843 | 0.829488 | 5.00E-55 | -1.69E-46 |
| MS.gene053826 | MS.gene072303 | -0.812602 | 3.90E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene072476 | 0.861284 | 1.14E-63 | -1.69E-46 |
| MS.gene053826 | MS.gene072806 | 0.813911 | 2.01E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene072875 | -0.800516 | 1.39E-48 | -1.69E-46 |
| MS.gene053826 | MS.gene073868 | 0.816947 | 4.25E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene08195 | 0.804735 | 1.87E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene08238 | 0.840081 | 1.08E-57 | -1.69E-46 |
| MS.gene053826 | MS.gene20878 | -0.836548 | 8.77E-57 | -1.69E-46 |
| MS.gene053826 | MS.gene21349 | 0.820107 | 8.17E-53 | -1.69E-46 |
| MS.gene053826 | MS.gene21350 | 0.840422 | 8.78E-58 | -1.69E-46 |
| MS.gene053826 | MS.gene21575 | 0.834616 | 2.70E-56 | -1.69E-46 |
| MS.gene053826 | MS.gene21577 | 0.845755 | 3.33E-59 | -1.69E-46 |
| MS.gene053826 | MS.gene21868 | 0.821622 | 3.66E-53 | -1.69E-46 |
| MS.gene053826 | MS.gene21870 | 0.838418 | 2.91E-57 | -1.69E-46 |
| MS.gene053826 | MS.gene22261 | 0.831498 | 1.61E-55 | -1.69E-46 |
| MS.gene053826 | MS.gene23352 | -0.801404 | 9.15E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene24099 | 0.830057 | 3.64E-55 | -1.69E-46 |
| MS.gene053826 | MS.gene24272 | 0.812609 | 3.89E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene24491 | 0.854012 | 1.63E-61 | -1.69E-46 |
| MS.gene053826 | MS.gene26861 | 0.801517 | 8.68E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene27550 | 0.825372 | 4.86E-54 | -1.69E-46 |
| MS.gene053826 | MS.gene27779 | 0.82189 | 3.17E-53 | -1.69E-46 |
| MS.gene053826 | MS.gene27832 | 0.816082 | 6.64E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene27833 | 0.818564 | 1.84E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene27835 | 0.855497 | 6.06E-62 | -1.69E-46 |
| MS.gene053826 | MS.gene28057 | 0.806404 | 8.36E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene28210 | 0.804061 | 2.59E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene28723 | 0.808332 | 3.26E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene28724 | 0.816237 | 6.13E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene29342 | 0.860913 | 1.48E-63 | -1.69E-46 |
| MS.gene053826 | MS.gene29481 | 0.842438 | 2.59E-58 | -1.69E-46 |
| MS.gene053826 | MS.gene30788 | 0.821063 | 4.93E-53 | -1.69E-46 |
| MS.gene053826 | MS.gene30995 | 0.810706 | 1.01E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene31404 | 0.834391 | 3.08E-56 | -1.69E-46 |
| MS.gene053826 | MS.gene32567 | 0.811915 | 5.51E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene32652 | -0.82682 | 2.20E-54 | -1.69E-46 |
| MS.gene053826 | MS.gene33913 | 0.801691 | 7.99E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene34412 | 0.813949 | 1.98E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene36438 | 0.81542 | 9.33E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene36439 | 0.802055 | 6.73E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene38094 | 0.83394 | 3.99E-56 | -1.69E-46 |
| MS.gene053826 | MS.gene38095 | 0.813219 | 2.86E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene38097 | 0.834925 | 2.26E-56 | -1.69E-46 |
| MS.gene053826 | MS.gene38172 | 0.843861 | 1.08E-58 | -1.69E-46 |
| MS.gene053826 | MS.gene38173 | 0.820609 | 6.27E-53 | -1.69E-46 |
| MS.gene053826 | MS.gene38174 | 0.836512 | 8.96E-57 | -1.69E-46 |
| MS.gene053826 | MS.gene38706 | 0.813464 | 2.53E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene40619 | 0.807291 | 5.43E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene41739 | 0.818178 | 2.24E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene44720 | 0.831501 | 1.61E-55 | -1.69E-46 |
| MS.gene053826 | MS.gene44721 | 0.83734 | 5.51E-57 | -1.69E-46 |
| MS.gene053826 | MS.gene44722 | 0.847175 | 1.37E-59 | -1.69E-46 |
| MS.gene053826 | MS.gene44723 | 0.86385 | 1.85E-64 | -1.69E-46 |
| MS.gene053826 | MS.gene45155 | 0.806415 | 8.32E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene45854 | 0.820433 | 6.88E-53 | -1.69E-46 |
| MS.gene053826 | MS.gene46057 | 0.825753 | 3.95E-54 | -1.69E-46 |
| MS.gene053826 | MS.gene46060 | 0.814841 | 1.25E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene47049 | 0.832751 | 7.91E-56 | -1.69E-46 |
| MS.gene053826 | MS.gene47109 | 0.804514 | 2.08E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene49885 | 0.818812 | 1.61E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene49886 | 0.840637 | 7.71E-58 | -1.69E-46 |
| MS.gene053826 | MS.gene49887 | 0.878776 | 2.14E-69 | -1.69E-46 |
| MS.gene053826 | MS.gene50174 | 0.810271 | 1.25E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene50709 | -0.805965 | 1.03E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene51514 | 0.814197 | 1.74E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene53268 | 0.823225 | 1.55E-53 | -1.69E-46 |
| MS.gene053826 | MS.gene53270 | 0.808558 | 2.92E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene53498 | 0.808813 | 2.58E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene54303 | 0.827685 | 1.36E-54 | -1.69E-46 |
| MS.gene053826 | MS.gene54882 | 0.839853 | 1.24E-57 | -1.69E-46 |
| MS.gene053826 | MS.gene55013 | 0.848772 | 4.95E-60 | -1.69E-46 |
| MS.gene053826 | MS.gene56849 | 0.802161 | 6.40E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene57313 | 0.844091 | 9.37E-59 | -1.69E-46 |
| MS.gene053826 | MS.gene57673 | 0.808006 | 3.83E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene57674 | 0.819205 | 1.31E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene57699 | 0.812731 | 3.66E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene57756 | 0.856736 | 2.63E-62 | -1.69E-46 |
| MS.gene053826 | MS.gene58464 | 0.802923 | 4.45E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene58983 | -0.800271 | 1.56E-48 | -1.69E-46 |
| MS.gene053826 | MS.gene60649 | 0.812023 | 5.22E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene60720 | 0.839019 | 2.03E-57 | -1.69E-46 |
| MS.gene053826 | MS.gene60721 | 0.841922 | 3.54E-58 | -1.69E-46 |
| MS.gene053826 | MS.gene60722 | 0.844586 | 6.90E-59 | -1.69E-46 |
| MS.gene053826 | MS.gene62835 | 0.819517 | 1.11E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene63052 | 0.983548 | 4.80E-158 | -1.69E-46 |
| MS.gene053826 | MS.gene63691 | 0.809059 | 2.28E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene63751 | 0.818992 | 1.47E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene64441 | 0.834496 | 2.90E-56 | -1.69E-46 |
| MS.gene053826 | MS.gene64615 | 0.888531 | 5.44E-73 | -1.69E-46 |
| MS.gene053826 | MS.gene64630 | 0.863862 | 1.84E-64 | -1.69E-46 |
| MS.gene053826 | MS.gene65515 | 0.807819 | 4.20E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene65609 | 0.80247 | 5.53E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene65672 | 0.910003 | 3.04E-82 | -1.69E-46 |
| MS.gene053826 | MS.gene67682 | 0.815016 | 1.15E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene67744 | 0.847998 | 8.11E-60 | -1.69E-46 |
| MS.gene053826 | MS.gene68201 | 0.806142 | 9.50E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene72286 | 0.809835 | 1.55E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene74072 | 0.817507 | 3.18E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene75508 | 0.842925 | 1.92E-58 | -1.69E-46 |
| MS.gene053826 | MS.gene76146 | 0.804452 | 2.15E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene76446 | 0.817064 | 4.00E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene76539 | 0.826698 | 2.35E-54 | -1.69E-46 |
| MS.gene053826 | MS.gene77183 | 0.812287 | 4.57E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene78417 | 0.80281 | 4.70E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene78418 | 0.813704 | 2.24E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene78593 | 0.87111 | 8.77E-67 | -1.69E-46 |
| MS.gene053826 | MS.gene78894 | 0.809699 | 1.66E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene79094 | 0.849809 | 2.55E-60 | -1.69E-46 |
| MS.gene053826 | MS.gene79178 | 0.807305 | 5.39E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene79201 | 0.843015 | 1.82E-58 | -1.69E-46 |
| MS.gene053826 | MS.gene80092 | 0.842701 | 2.20E-58 | -1.69E-46 |
| MS.gene053826 | MS.gene81108 | 0.844532 | 7.13E-59 | -1.69E-46 |
| MS.gene053826 | MS.gene82917 | -0.801045 | 1.08E-48 | -1.69E-46 |
| MS.gene053826 | MS.gene83843 | 0.818262 | 2.15E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene84704 | 0.84697 | 1.55E-59 | -1.69E-46 |
| MS.gene053826 | MS.gene85154 | 0.801254 | 9.82E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene85220 | 0.829518 | 4.92E-55 | -1.69E-46 |
| MS.gene053826 | MS.gene85298 | 0.821533 | 3.84E-53 | -1.69E-46 |
| MS.gene053826 | MS.gene86921 | 0.805452 | 1.33E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene87470 | 0.815698 | 8.09E-52 | -1.69E-46 |
| MS.gene053826 | MS.gene88198 | 0.809944 | 1.47E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene88886 | 0.853299 | 2.62E-61 | -1.69E-46 |
| MS.gene053826 | MS.gene88887 | 0.845643 | 3.57E-59 | -1.69E-46 |
| MS.gene053826 | MS.gene88888 | 0.845932 | 2.98E-59 | -1.69E-46 |
| MS.gene053826 | MS.gene88977 | 0.828309 | 9.66E-55 | -1.69E-46 |
| MS.gene053826 | MS.gene89620 | 0.82617 | 3.14E-54 | -1.69E-46 |
| MS.gene053826 | MS.gene90192 | 0.806958 | 6.39E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene91309 | 0.809592 | 1.75E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene91418 | 0.813188 | 2.90E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene91775 | 0.814469 | 1.52E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene91973 | 0.841715 | 4.02E-58 | -1.69E-46 |
| MS.gene053826 | MS.gene91976 | 0.843716 | 1.18E-58 | -1.69E-46 |
| MS.gene053826 | MS.gene91977 | 0.829304 | 5.55E-55 | -1.69E-46 |
| MS.gene053826 | MS.gene92808 | 0.839655 | 1.39E-57 | -1.69E-46 |
| MS.gene053826 | MS.gene93015 | 0.855955 | 4.46E-62 | -1.69E-46 |
| MS.gene053826 | MS.gene95833 | 0.826216 | 3.06E-54 | -1.69E-46 |
| MS.gene053826 | MS.gene96309 | -0.812454 | 4.21E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene96692 | 0.82012 | 8.11E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene053826 | MS.gene01361 | PPI |
| MS.gene053826 | MS.gene052539 | PPI |
| MS.gene053826 | MS.gene33739 | PPI |
| MS.gene053826 | MS.gene035220 | PPI |
| MS.gene053826 | MS.gene047520 | PPI |
| MS.gene053826 | MS.gene01769 | PPI |
| MS.gene053826 | MS.gene32189 | PPI |
| MS.gene053826 | MS.gene002383 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053826.t1 | MTR_5g056140 | 95.238 | 294 | 14 | 0 | 1 | 294 | 1 | 294 | 0.0 | 594 |
| MS.gene053826.t1 | MTR_5g056160 | 78.378 | 296 | 62 | 1 | 1 | 294 | 1 | 296 | 5.63e-180 | 498 |
| MS.gene053826.t1 | MTR_1g110510 | 67.021 | 282 | 90 | 2 | 5 | 286 | 5 | 283 | 5.58e-144 | 406 |
| MS.gene053826.t1 | MTR_1g110510 | 64.629 | 229 | 78 | 2 | 5 | 233 | 5 | 230 | 1.49e-111 | 322 |
| MS.gene053826.t1 | MTR_4g090610 | 57.934 | 271 | 109 | 3 | 20 | 286 | 16 | 285 | 2.44e-109 | 319 |
| MS.gene053826.t1 | MTR_4g090610 | 57.299 | 274 | 112 | 3 | 20 | 289 | 60 | 332 | 3.15e-109 | 320 |
| MS.gene053826.t1 | MTR_4g090610 | 57.299 | 274 | 112 | 3 | 20 | 289 | 105 | 377 | 6.00e-109 | 321 |
| MS.gene053826.t1 | MTR_2g012440 | 45.423 | 284 | 142 | 6 | 8 | 286 | 16 | 291 | 3.81e-86 | 260 |
| MS.gene053826.t1 | MTR_4g090610 | 57.216 | 194 | 78 | 3 | 20 | 209 | 16 | 208 | 6.08e-74 | 227 |
| MS.gene053826.t1 | MTR_4g090610 | 57.216 | 194 | 78 | 3 | 20 | 209 | 60 | 252 | 1.11e-73 | 228 |
| MS.gene053826.t1 | MTR_5g056560 | 72.800 | 125 | 34 | 0 | 132 | 256 | 35 | 159 | 3.55e-66 | 206 |
| MS.gene053826.t1 | MTR_2g012440 | 44.749 | 219 | 111 | 4 | 8 | 222 | 16 | 228 | 1.05e-65 | 206 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053826.t1 | AT1G68290 | 59.233 | 287 | 112 | 4 | 2 | 286 | 6 | 289 | 1.58e-124 | 357 |
| MS.gene053826.t1 | AT4G21585 | 54.577 | 284 | 122 | 4 | 11 | 289 | 12 | 293 | 7.66e-108 | 315 |
| MS.gene053826.t1 | AT4G21585 | 54.577 | 284 | 122 | 4 | 11 | 289 | 12 | 293 | 7.66e-108 | 315 |
| MS.gene053826.t1 | AT4G21585 | 50.987 | 304 | 116 | 5 | 17 | 289 | 18 | 319 | 7.50e-102 | 301 |
| MS.gene053826.t1 | AT4G21585 | 50.654 | 306 | 116 | 5 | 17 | 289 | 18 | 321 | 8.55e-102 | 301 |
| MS.gene053826.t1 | AT4G21590 | 50.345 | 290 | 131 | 4 | 11 | 293 | 9 | 292 | 3.17e-100 | 296 |
| MS.gene053826.t1 | AT4G21590 | 50.345 | 290 | 131 | 4 | 11 | 293 | 9 | 292 | 3.17e-100 | 296 |
| MS.gene053826.t1 | AT4G21600 | 47.119 | 295 | 148 | 5 | 5 | 293 | 2 | 294 | 3.49e-95 | 283 |
| MS.gene053826.t1 | AT1G11190 | 46.429 | 280 | 144 | 5 | 18 | 293 | 23 | 300 | 1.01e-88 | 267 |
| MS.gene053826.t1 | AT4G21585 | 47.755 | 245 | 95 | 5 | 17 | 230 | 18 | 260 | 3.43e-72 | 223 |
| MS.gene053826.t1 | AT4G21585 | 47.755 | 245 | 95 | 5 | 17 | 230 | 18 | 260 | 3.43e-72 | 223 |
Find 59 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCCCACCCTTGTGTATTT+TGG | 0.057389 | 5.1:+44131884 | None:intergenic |
| AAGTCATTCTTTGCAGATTT+TGG | 0.191644 | 5.1:+44131557 | None:intergenic |
| GTAGCAAAGATGCTTGTAAA+TGG | 0.276468 | 5.1:-44129961 | MS.gene053826:CDS |
| TTGGGAGAGCTGCGGTTCTA+AGG | 0.355984 | 5.1:-44130262 | MS.gene053826:CDS |
| CACAGCCTTAGCAGCTGTAT+TGG | 0.359328 | 5.1:+44131592 | None:intergenic |
| AAATTCAGAACATACGTAAT+CGG | 0.361018 | 5.1:+44130228 | None:intergenic |
| TTGTAAGTGCAAACATTATC+AGG | 0.396141 | 5.1:+44131458 | None:intergenic |
| ACTTGGCAAGTCAGTGTTCA+TGG | 0.401199 | 5.1:-44131538 | MS.gene053826:CDS |
| GATCATAAAACTGGAACAAA+GGG | 0.408172 | 5.1:-44131156 | MS.gene053826:CDS |
| CAAAAGAAGGAATGAAACTA+TGG | 0.412666 | 5.1:+44131909 | None:intergenic |
| TGATAATGTTTGCACTTACA+AGG | 0.434514 | 5.1:-44131456 | MS.gene053826:CDS |
| GGGCTGATCAAGTAGAAGAT+TGG | 0.436637 | 5.1:-44130281 | MS.gene053826:CDS |
| GCGAAAGGAATAGAAGAGAT+TGG | 0.436694 | 5.1:+44130895 | None:intergenic |
| GATTGTATAGATCATAAAAC+TGG | 0.437632 | 5.1:-44131165 | MS.gene053826:CDS |
| CACTGCCAAAGTCGAGGAGC+TGG | 0.438071 | 5.1:+44131097 | None:intergenic |
| GGCTGATCAAGTAGAAGATT+GGG | 0.446590 | 5.1:-44130280 | MS.gene053826:CDS |
| CAAAGGAGGCAATGAAATTA+CGG | 0.449837 | 5.1:-44130731 | MS.gene053826:CDS |
| CCTTAGCAGCTGTATTGGTT+AGG | 0.449842 | 5.1:+44131597 | None:intergenic |
| TTTCAATAAACAGAGAGAAT+GGG | 0.454542 | 5.1:-44130301 | MS.gene053826:intron |
| ACTACCCAGCTCCTCGACTT+TGG | 0.456718 | 5.1:-44131102 | MS.gene053826:CDS |
| TCTGAAGGTTCAGTACTTGA+TGG | 0.464394 | 5.1:-44129923 | MS.gene053826:intron |
| TAGCAAAGATGCTTGTAAAT+GGG | 0.476783 | 5.1:-44129960 | MS.gene053826:CDS |
| CGAAAGGAATAGAAGAGATT+GGG | 0.477879 | 5.1:+44130896 | None:intergenic |
| GTCAATTTGCGATTAGCTCA+AGG | 0.486714 | 5.1:-44129782 | MS.gene053826:CDS |
| AATTCAGAACATACGTAATC+GGG | 0.489249 | 5.1:+44130229 | None:intergenic |
| ACACAAGGGTGGGGAGATGA+TGG | 0.491069 | 5.1:-44131877 | MS.gene053826:CDS |
| TGTGGCTTTGTCTCGGACAA+AGG | 0.496950 | 5.1:-44130748 | MS.gene053826:CDS |
| TGCTTGTAAATGGGCATATG+AGG | 0.505629 | 5.1:-44129951 | MS.gene053826:CDS |
| ATGTGAGGTTTATCTATCAA+TGG | 0.508536 | 5.1:-44131508 | MS.gene053826:CDS |
| CATTGTTTGTAAAATTGCTC+AGG | 0.515605 | 5.1:-44131848 | MS.gene053826:intron |
| TCTACATTGTGGCTTTGTCT+CGG | 0.516371 | 5.1:-44130755 | MS.gene053826:CDS |
| AGATCATAAAACTGGAACAA+AGG | 0.520100 | 5.1:-44131157 | MS.gene053826:CDS |
| GGAATAGAAGAGATTGGGTG+AGG | 0.528683 | 5.1:+44130901 | None:intergenic |
| GGTGTATCAGCAAAGTGTAA+AGG | 0.531752 | 5.1:+44131479 | None:intergenic |
| GATCCAAAATACACAAGGGT+GGG | 0.533922 | 5.1:-44131887 | MS.gene053826:CDS |
| CCTAACCAATACAGCTGCTA+AGG | 0.537685 | 5.1:-44131597 | MS.gene053826:CDS |
| TGACGATAGGAAAACGTGAC+AGG | 0.538079 | 5.1:+44129801 | None:intergenic |
| AGAACATACGTAATCGGGCA+TGG | 0.554903 | 5.1:+44130234 | None:intergenic |
| TCAATTTGCGATTAGCTCAA+GGG | 0.555653 | 5.1:-44129781 | MS.gene053826:CDS |
| ATCCAAAATACACAAGGGTG+GGG | 0.564859 | 5.1:-44131886 | MS.gene053826:CDS |
| CTTGGCAAGTCAGTGTTCAT+GGG | 0.569422 | 5.1:-44131537 | MS.gene053826:CDS |
| GCAATGAAATTACGGTTCGT+TGG | 0.576424 | 5.1:-44130723 | MS.gene053826:CDS |
| AACAAAGGGGCGATGTGTCG+TGG | 0.590208 | 5.1:-44131142 | MS.gene053826:CDS |
| ACTGCCAAAGTCGAGGAGCT+GGG | 0.590281 | 5.1:+44131098 | None:intergenic |
| AATATGCAGCCTCTACATTG+TGG | 0.591586 | 5.1:-44130766 | MS.gene053826:intron |
| CAATTTGCGATTAGCTCAAG+GGG | 0.597955 | 5.1:-44129780 | MS.gene053826:CDS |
| GCTAATCGCAAATTGACGAT+AGG | 0.606094 | 5.1:+44129788 | None:intergenic |
| TGATCCAAAATACACAAGGG+TGG | 0.611055 | 5.1:-44131888 | MS.gene053826:CDS |
| TATCTCCCATAAAATGCGAA+AGG | 0.611343 | 5.1:+44130880 | None:intergenic |
| TGCAATTCAACAAAATATCA+CGG | 0.615303 | 5.1:-44130514 | MS.gene053826:intron |
| AAAATCTGCAAAGAATGACT+TGG | 0.616396 | 5.1:-44131555 | MS.gene053826:CDS |
| GTTCATGGGCAGATCATGTG+AGG | 0.620156 | 5.1:-44131523 | MS.gene053826:CDS |
| GGCTTTGTCTCGGACAAAGG+AGG | 0.625135 | 5.1:-44130745 | MS.gene053826:CDS |
| GCATATGAGGATGCATCTGA+AGG | 0.627996 | 5.1:-44129938 | MS.gene053826:CDS |
| CAGTGTCACTGCCAAAGTCG+AGG | 0.629675 | 5.1:+44131091 | None:intergenic |
| GAGACAAAGCCACAATGTAG+AGG | 0.640949 | 5.1:+44130757 | None:intergenic |
| GTAGAAGATTGGGAGAGCTG+CGG | 0.698014 | 5.1:-44130270 | MS.gene053826:CDS |
| ATCATAAAACTGGAACAAAG+GGG | 0.707464 | 5.1:-44131155 | MS.gene053826:CDS |
| AATTTGCGATTAGCTCAAGG+GGG | 0.760919 | 5.1:-44129779 | MS.gene053826:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAAAAAAACAATAAA+TGG | - | chr5.1:44131511-44131530 | MS.gene053826:CDS | 10.0% |
| !! | GATATAAATATATTGTTTAA+CGG | + | chr5.1:44130430-44130449 | None:intergenic | 10.0% |
| !! | TTAACTTATATGTAAATTAA+TGG | + | chr5.1:44130679-44130698 | None:intergenic | 10.0% |
| !!! | CGTTAATTTTTTATTTTTTT+TGG | - | chr5.1:44131224-44131243 | MS.gene053826:intron | 10.0% |
| !!! | TTAAATTGTATTTTATATGA+AGG | - | chr5.1:44131048-44131067 | MS.gene053826:intron | 10.0% |
| !!! | TTTTTTTTTTGCTTTTAAAT+AGG | - | chr5.1:44130031-44130050 | MS.gene053826:intron | 10.0% |
| !! | ATTATATATAGAAGAAGAAA+TGG | + | chr5.1:44130243-44130262 | None:intergenic | 15.0% |
| !!! | GTTATTTAATTTGAAAAGAA+AGG | + | chr5.1:44130608-44130627 | None:intergenic | 15.0% |
| !!! | TTTTATTTTTTTTGGTTAAG+TGG | - | chr5.1:44131232-44131251 | MS.gene053826:intron | 15.0% |
| !!! | TTTTCATTTCTAAATTTGAT+TGG | - | chr5.1:44129967-44129986 | MS.gene053826:CDS | 15.0% |
| !!! | TTTTGTTTTTTAAACATTCA+GGG | - | chr5.1:44130467-44130486 | MS.gene053826:intron | 15.0% |
| !! | AGTAATGAAAAAATGAAAGA+TGG | - | chr5.1:44129929-44129948 | MS.gene053826:CDS | 20.0% |
| !! | ATCCTGTTATTATATTTAGT+CGG | - | chr5.1:44129866-44129885 | MS.gene053826:intron | 20.0% |
| !! | CTGAATGTTTAAAAAACAAA+AGG | + | chr5.1:44130468-44130487 | None:intergenic | 20.0% |
| !! | GTTAGAACTATAGAAAAATT+TGG | - | chr5.1:44131582-44131601 | MS.gene053826:CDS | 20.0% |
| !!! | AAAAACAAAAGGTATTCTTT+TGG | + | chr5.1:44130457-44130476 | None:intergenic | 20.0% |
| !!! | CTTTTGTTTTTTAAACATTC+AGG | - | chr5.1:44130466-44130485 | MS.gene053826:intron | 20.0% |
| !!! | TATTATATTTAGTCGGTTTT+TGG | - | chr5.1:44129873-44129892 | MS.gene053826:intron | 20.0% |
| !!! | TGTATTTTATATGAAGGTTT+GGG | - | chr5.1:44131054-44131073 | MS.gene053826:intron | 20.0% |
| !!! | TTGTATTTTATATGAAGGTT+TGG | - | chr5.1:44131053-44131072 | MS.gene053826:intron | 20.0% |
| !!! | TTTGTTTTTTAAACATTCAG+GGG | - | chr5.1:44130468-44130487 | MS.gene053826:intron | 20.0% |
| ! | AAATTCAGAACATACGTAAT+CGG | + | chr5.1:44131430-44131449 | None:intergenic | 25.0% |
| ! | AACCGACTAAATATAATAAC+AGG | + | chr5.1:44129871-44129890 | None:intergenic | 25.0% |
| ! | ATATAGAAGAAGAAATGGAA+AGG | + | chr5.1:44130238-44130257 | None:intergenic | 25.0% |
| ! | ATCTATGTTACTCGAAAATT+TGG | - | chr5.1:44131623-44131642 | MS.gene053826:intron | 25.0% |
| ! | GAATATTTCATTAGCAAAGT+AGG | + | chr5.1:44129839-44129858 | None:intergenic | 25.0% |
| ! | GATTGTATAGATCATAAAAC+TGG | - | chr5.1:44130490-44130509 | MS.gene053826:intron | 25.0% |
| ! | TGCAATTCAACAAAATATCA+CGG | - | chr5.1:44131141-44131160 | MS.gene053826:CDS | 25.0% |
| ! | TTAGAGTATAAAAAATCGAG+TGG | + | chr5.1:44130713-44130732 | None:intergenic | 25.0% |
| ! | TTTCAATAAACAGAGAGAAT+GGG | - | chr5.1:44131354-44131373 | MS.gene053826:intron | 25.0% |
| !! | TTTTCAATAAACAGAGAGAA+TGG | - | chr5.1:44131353-44131372 | MS.gene053826:intron | 25.0% |
| !! | TTTTGATCCAAAATACACAA+GGG | - | chr5.1:44129764-44129783 | MS.gene053826:CDS | 25.0% |
| AAAATCTGCAAAGAATGACT+TGG | - | chr5.1:44130100-44130119 | MS.gene053826:intron | 30.0% | |
| AAGAAAGAAATGAGTCATGT+TGG | + | chr5.1:44131322-44131341 | None:intergenic | 30.0% | |
| AAGTTGCACATTTACTTAGA+TGG | + | chr5.1:44130865-44130884 | None:intergenic | 30.0% | |
| AATTCAGAACATACGTAATC+GGG | + | chr5.1:44131429-44131448 | None:intergenic | 30.0% | |
| AGATCATAAAACTGGAACAA+AGG | - | chr5.1:44130498-44130517 | MS.gene053826:intron | 30.0% | |
| AGCAATGAATTTGACATACA+TGG | + | chr5.1:44130981-44131000 | None:intergenic | 30.0% | |
| ATAAAAAATCGAGTGGATGT+AGG | + | chr5.1:44130706-44130725 | None:intergenic | 30.0% | |
| ATCATAAAACTGGAACAAAG+GGG | - | chr5.1:44130500-44130519 | MS.gene053826:intron | 30.0% | |
| ATGTGAGGTTTATCTATCAA+TGG | - | chr5.1:44130147-44130166 | MS.gene053826:intron | 30.0% | |
| ATTTCATTAGCAAAGTAGGA+AGG | + | chr5.1:44129835-44129854 | None:intergenic | 30.0% | |
| CAAAAGAAGGAATGAAACTA+TGG | + | chr5.1:44129749-44129768 | None:intergenic | 30.0% | |
| CATTGTTTGTAAAATTGCTC+AGG | - | chr5.1:44129807-44129826 | MS.gene053826:CDS | 30.0% | |
| GAGTAACATAGATAAACTCA+AGG | + | chr5.1:44131616-44131635 | None:intergenic | 30.0% | |
| GATCATAAAACTGGAACAAA+GGG | - | chr5.1:44130499-44130518 | MS.gene053826:intron | 30.0% | |
| TAGCAAAGATGCTTGTAAAT+GGG | - | chr5.1:44131695-44131714 | MS.gene053826:intron | 30.0% | |
| TTATGTTAATGCAAACCTGA+TGG | + | chr5.1:44130802-44130821 | None:intergenic | 30.0% | |
| TTGTAAGTGCAAACATTATC+AGG | + | chr5.1:44130200-44130219 | None:intergenic | 30.0% | |
| ! | AAGTCATTCTTTGCAGATTT+TGG | + | chr5.1:44130101-44130120 | None:intergenic | 30.0% |
| ! | CTATTCCTTTCGCATTTTAT+GGG | - | chr5.1:44130770-44130789 | MS.gene053826:intron | 30.0% |
| ! | CTGAGCAATTTTACAAACAA+TGG | + | chr5.1:44129809-44129828 | None:intergenic | 30.0% |
| ! | CTTTTGATCCAAAATACACA+AGG | - | chr5.1:44129763-44129782 | MS.gene053826:CDS | 30.0% |
| ! | TACTCGAAAATTTGGAATAC+AGG | - | chr5.1:44131631-44131650 | MS.gene053826:intron | 30.0% |
| ! | TCTAACTTTTAAGCTTGCAA+TGG | + | chr5.1:44131568-44131587 | None:intergenic | 30.0% |
| ! | TCTATTCCTTTCGCATTTTA+TGG | - | chr5.1:44130769-44130788 | MS.gene053826:intron | 30.0% |
| ! | TGATAATGTTTGCACTTACA+AGG | - | chr5.1:44130199-44130218 | MS.gene053826:intron | 30.0% |
| ! | TTTTAAACCAATGTGTGATG+TGG | - | chr5.1:44130345-44130364 | MS.gene053826:intron | 30.0% |
| !! | GTGTATTTTGGATCAAAAGA+AGG | + | chr5.1:44129762-44129781 | None:intergenic | 30.0% |
| CAAAGGAGGCAATGAAATTA+CGG | - | chr5.1:44130924-44130943 | MS.gene053826:intron | 35.0% | |
| CAATGGAAGCAACTATTCTT+TGG | + | chr5.1:44131551-44131570 | None:intergenic | 35.0% | |
| CAATGTGTGATGTGGAAAAT+TGG | - | chr5.1:44130353-44130372 | MS.gene053826:intron | 35.0% | |
| CGAAAGGAATAGAAGAGATT+GGG | + | chr5.1:44130762-44130781 | None:intergenic | 35.0% | |
| GAAATAAACCGATGAAAACC+GGG | + | chr5.1:44130299-44130318 | None:intergenic | 35.0% | |
| GGAAATAAACCGATGAAAAC+CGG | + | chr5.1:44130300-44130319 | None:intergenic | 35.0% | |
| GGAATACAGGTACTTAACTT+TGG | - | chr5.1:44131644-44131663 | MS.gene053826:intron | 35.0% | |
| GTAGCAAAGATGCTTGTAAA+TGG | - | chr5.1:44131694-44131713 | MS.gene053826:intron | 35.0% | |
| TACCAGAGATATTATACGCA+GGG | + | chr5.1:44131282-44131301 | None:intergenic | 35.0% | |
| TATCTCCCATAAAATGCGAA+AGG | + | chr5.1:44130778-44130797 | None:intergenic | 35.0% | |
| TCATACAAAAATGTGTGACG+TGG | + | chr5.1:44130321-44130340 | None:intergenic | 35.0% | |
| TTGGTTAAGTGGAAAATCTG+AGG | - | chr5.1:44131243-44131262 | MS.gene053826:intron | 35.0% | |
| ! | ACAATAAGAGCATACAACTG+TGG | + | chr5.1:44130630-44130649 | None:intergenic | 35.0% |
| ! | CAATTTTCCACATCACACAT+TGG | + | chr5.1:44130355-44130374 | None:intergenic | 35.0% |
| ! | TCAATTTGCGATTAGCTCAA+GGG | - | chr5.1:44131874-44131893 | MS.gene053826:CDS | 35.0% |
| ! | TTTTATGGGAGATATCCATC+AGG | - | chr5.1:44130784-44130803 | MS.gene053826:intron | 35.0% |
| !!! | AAGCACTCAAGCATGTTTTT+TGG | + | chr5.1:44130842-44130861 | None:intergenic | 35.0% |
| !!! | AGCACTCAAGCATGTTTTTT+GGG | + | chr5.1:44130841-44130860 | None:intergenic | 35.0% |
| AATATGCAGCCTCTACATTG+TGG | - | chr5.1:44130889-44130908 | MS.gene053826:CDS | 40.0% | |
| ACCAGAGATATTATACGCAG+GGG | + | chr5.1:44131281-44131300 | None:intergenic | 40.0% | |
| ATCCAAAATACACAAGGGTG+GGG | - | chr5.1:44129769-44129788 | MS.gene053826:CDS | 40.0% | |
| CTACCAGAGATATTATACGC+AGG | + | chr5.1:44131283-44131302 | None:intergenic | 40.0% | |
| GATCCAAAATACACAAGGGT+GGG | - | chr5.1:44129768-44129787 | MS.gene053826:CDS | 40.0% | |
| GCAATGAAATTACGGTTCGT+TGG | - | chr5.1:44130932-44130951 | MS.gene053826:intron | 40.0% | |
| GCGAAAGGAATAGAAGAGAT+TGG | + | chr5.1:44130763-44130782 | None:intergenic | 40.0% | |
| GCTAATCGCAAATTGACGAT+AGG | + | chr5.1:44131870-44131889 | None:intergenic | 40.0% | |
| GGCTGATCAAGTAGAAGATT+GGG | - | chr5.1:44131375-44131394 | MS.gene053826:intron | 40.0% | |
| GGTGTATCAGCAAAGTGTAA+AGG | + | chr5.1:44130179-44130198 | None:intergenic | 40.0% | |
| TCTGAAGGTTCAGTACTTGA+TGG | - | chr5.1:44131732-44131751 | MS.gene053826:intron | 40.0% | |
| TGATCCAAAATACACAAGGG+TGG | - | chr5.1:44129767-44129786 | MS.gene053826:CDS | 40.0% | |
| TGCTTGTAAATGGGCATATG+AGG | - | chr5.1:44131704-44131723 | MS.gene053826:intron | 40.0% | |
| TGTGTGATGTGGAAAATTGG+CGG | - | chr5.1:44130356-44130375 | MS.gene053826:intron | 40.0% | |
| TTACTTTCGCATCCAATGAG+AGG | + | chr5.1:44130382-44130401 | None:intergenic | 40.0% | |
| ! | AATTTGCGATTAGCTCAAGG+GGG | - | chr5.1:44131876-44131895 | MS.gene053826:CDS | 40.0% |
| ! | CAATTTGCGATTAGCTCAAG+GGG | - | chr5.1:44131875-44131894 | MS.gene053826:CDS | 40.0% |
| ! | GAAAATCTGAGGTTCGAACA+TGG | - | chr5.1:44131254-44131273 | MS.gene053826:intron | 40.0% |
| ! | GTCAATTTGCGATTAGCTCA+AGG | - | chr5.1:44131873-44131892 | MS.gene053826:CDS | 40.0% |
| !! | GCAACTATTCTTTGGAACAG+AGG | + | chr5.1:44131543-44131562 | None:intergenic | 40.0% |
| !! | TCGTATTTTTGACGCACAGT+TGG | - | chr5.1:44131923-44131942 | MS.gene053826:CDS | 40.0% |
| !! | TCTACATTGTGGCTTTGTCT+CGG | - | chr5.1:44130900-44130919 | MS.gene053826:CDS | 40.0% |
| ACCCCTGCGTATAATATCTC+TGG | - | chr5.1:44131277-44131296 | MS.gene053826:intron | 45.0% | |
| ACTTGGCAAGTCAGTGTTCA+TGG | - | chr5.1:44130117-44130136 | MS.gene053826:intron | 45.0% | |
| AGAACATACGTAATCGGGCA+TGG | + | chr5.1:44131424-44131443 | None:intergenic | 45.0% | |
| ATAAACCGATGAAAACCGGG+TGG | + | chr5.1:44130296-44130315 | None:intergenic | 45.0% | |
| CCTAACCAATACAGCTGCTA+AGG | - | chr5.1:44130058-44130077 | MS.gene053826:intron | 45.0% | |
| CTTGGCAAGTCAGTGTTCAT+GGG | - | chr5.1:44130118-44130137 | MS.gene053826:intron | 45.0% | |
| GAGACAAAGCCACAATGTAG+AGG | + | chr5.1:44130901-44130920 | None:intergenic | 45.0% | |
| GCATATGAGGATGCATCTGA+AGG | - | chr5.1:44131717-44131736 | MS.gene053826:intron | 45.0% | |
| GGAATAGAAGAGATTGGGTG+AGG | + | chr5.1:44130757-44130776 | None:intergenic | 45.0% | |
| GGGCTGATCAAGTAGAAGAT+TGG | - | chr5.1:44131374-44131393 | MS.gene053826:intron | 45.0% | |
| TGACGATAGGAAAACGTGAC+AGG | + | chr5.1:44131857-44131876 | None:intergenic | 45.0% | |
| ! | ATGTTGGTTAGCTCAGTTGG+TGG | + | chr5.1:44131306-44131325 | None:intergenic | 45.0% |
| ! | GTCATGTTGGTTAGCTCAGT+TGG | + | chr5.1:44131309-44131328 | None:intergenic | 45.0% |
| !! | CCTTAGCAGCTGTATTGGTT+AGG | + | chr5.1:44130061-44130080 | None:intergenic | 45.0% |
| CACAGCCTTAGCAGCTGTAT+TGG | + | chr5.1:44130066-44130085 | None:intergenic | 50.0% | |
| GAAAATTGGCGGCCTCTCAT+TGG | - | chr5.1:44130367-44130386 | MS.gene053826:intron | 50.0% | |
| GTAGAAGATTGGGAGAGCTG+CGG | - | chr5.1:44131385-44131404 | MS.gene053826:intron | 50.0% | |
| GTTCATGGGCAGATCATGTG+AGG | - | chr5.1:44130132-44130151 | MS.gene053826:intron | 50.0% | |
| TCAAGTTCGAATCCACCACC+CGG | - | chr5.1:44130278-44130297 | MS.gene053826:CDS | 50.0% | |
| ! | ATCCACCACCCGGTTTTCAT+CGG | - | chr5.1:44130288-44130307 | MS.gene053826:CDS | 50.0% |
| ! | CTCCCCACCCTTGTGTATTT+TGG | + | chr5.1:44129774-44129793 | None:intergenic | 50.0% |
| !! | TGTGGCTTTGTCTCGGACAA+AGG | - | chr5.1:44130907-44130926 | MS.gene053826:CDS | 50.0% |
| AACAAAGGGGCGATGTGTCG+TGG | - | chr5.1:44130513-44130532 | MS.gene053826:intron | 55.0% | |
| AACCGATGAAAACCGGGTGG+TGG | + | chr5.1:44130293-44130312 | None:intergenic | 55.0% | |
| ACACAAGGGTGGGGAGATGA+TGG | - | chr5.1:44129778-44129797 | MS.gene053826:CDS | 55.0% | |
| ACTACCCAGCTCCTCGACTT+TGG | - | chr5.1:44130553-44130572 | MS.gene053826:CDS | 55.0% | |
| ACTGCCAAAGTCGAGGAGCT+GGG | + | chr5.1:44130560-44130579 | None:intergenic | 55.0% | |
| AGCTCAAGGGGGAGTTCGAT+TGG | - | chr5.1:44131887-44131906 | MS.gene053826:CDS | 55.0% | |
| TTGGGAGAGCTGCGGTTCTA+AGG | - | chr5.1:44131393-44131412 | MS.gene053826:intron | 55.0% | |
| ! | CAGTGTCACTGCCAAAGTCG+AGG | + | chr5.1:44130567-44130586 | None:intergenic | 55.0% |
| ! | GGCTTTGTCTCGGACAAAGG+AGG | - | chr5.1:44130910-44130929 | MS.gene053826:intron | 55.0% |
| CACTGCCAAAGTCGAGGAGC+TGG | + | chr5.1:44130561-44130580 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 44129718 | 44131959 | 44129718 | ID=MS.gene053826 |
| chr5.1 | mRNA | 44129718 | 44131959 | 44129718 | ID=MS.gene053826.t1;Parent=MS.gene053826 |
| chr5.1 | exon | 44131849 | 44131959 | 44131849 | ID=MS.gene053826.t1.exon1;Parent=MS.gene053826.t1 |
| chr5.1 | CDS | 44131849 | 44131959 | 44131849 | ID=cds.MS.gene053826.t1;Parent=MS.gene053826.t1 |
| chr5.1 | exon | 44131450 | 44131624 | 44131450 | ID=MS.gene053826.t1.exon2;Parent=MS.gene053826.t1 |
| chr5.1 | CDS | 44131450 | 44131624 | 44131450 | ID=cds.MS.gene053826.t1;Parent=MS.gene053826.t1 |
| chr5.1 | exon | 44131082 | 44131189 | 44131082 | ID=MS.gene053826.t1.exon3;Parent=MS.gene053826.t1 |
| chr5.1 | CDS | 44131082 | 44131189 | 44131082 | ID=cds.MS.gene053826.t1;Parent=MS.gene053826.t1 |
| chr5.1 | exon | 44130872 | 44130927 | 44130872 | ID=MS.gene053826.t1.exon4;Parent=MS.gene053826.t1 |
| chr5.1 | CDS | 44130872 | 44130927 | 44130872 | ID=cds.MS.gene053826.t1;Parent=MS.gene053826.t1 |
| chr5.1 | exon | 44130696 | 44130779 | 44130696 | ID=MS.gene053826.t1.exon5;Parent=MS.gene053826.t1 |
| chr5.1 | CDS | 44130696 | 44130779 | 44130696 | ID=cds.MS.gene053826.t1;Parent=MS.gene053826.t1 |
| chr5.1 | exon | 44130515 | 44130607 | 44130515 | ID=MS.gene053826.t1.exon6;Parent=MS.gene053826.t1 |
| chr5.1 | CDS | 44130515 | 44130607 | 44130515 | ID=cds.MS.gene053826.t1;Parent=MS.gene053826.t1 |
| chr5.1 | exon | 44130243 | 44130310 | 44130243 | ID=MS.gene053826.t1.exon7;Parent=MS.gene053826.t1 |
| chr5.1 | CDS | 44130243 | 44130310 | 44130243 | ID=cds.MS.gene053826.t1;Parent=MS.gene053826.t1 |
| chr5.1 | exon | 44129924 | 44129997 | 44129924 | ID=MS.gene053826.t1.exon8;Parent=MS.gene053826.t1 |
| chr5.1 | CDS | 44129924 | 44129997 | 44129924 | ID=cds.MS.gene053826.t1;Parent=MS.gene053826.t1 |
| chr5.1 | exon | 44129718 | 44129833 | 44129718 | ID=MS.gene053826.t1.exon9;Parent=MS.gene053826.t1 |
| chr5.1 | CDS | 44129718 | 44129833 | 44129718 | ID=cds.MS.gene053826.t1;Parent=MS.gene053826.t1 |
| Gene Sequence |
| Protein sequence |
