Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48406.t1 | XP_024633550.1 | 92.9 | 482 | 32 | 2 | 1 | 480 | 1 | 482 | 3.10E-189 | 671.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48406.t1 | F4K0J3 | 42.1 | 216 | 123 | 1 | 24 | 237 | 584 | 799 | 6.7e-31 | 136.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48406.t1 | A0A396IXC3 | 93.2 | 482 | 31 | 2 | 1 | 480 | 1 | 482 | 2.3e-189 | 671.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049596 | MS.gene48406 | 0.804491 | 2.11E-49 | -1.69E-46 |
| MS.gene049989 | MS.gene48406 | 0.866658 | 2.43E-65 | -1.69E-46 |
| MS.gene050297 | MS.gene48406 | 0.855727 | 5.20E-62 | -1.69E-46 |
| MS.gene05124 | MS.gene48406 | 0.828745 | 7.58E-55 | -1.69E-46 |
| MS.gene051263 | MS.gene48406 | 0.801824 | 7.51E-49 | -1.69E-46 |
| MS.gene051629 | MS.gene48406 | 0.808432 | 3.11E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene48406 | 0.818005 | 2.46E-52 | -1.69E-46 |
| MS.gene051955 | MS.gene48406 | 0.841264 | 5.28E-58 | -1.69E-46 |
| MS.gene052143 | MS.gene48406 | 0.823216 | 1.56E-53 | -1.69E-46 |
| MS.gene052308 | MS.gene48406 | 0.821053 | 4.95E-53 | -1.69E-46 |
| MS.gene052367 | MS.gene48406 | 0.850571 | 1.56E-60 | -1.69E-46 |
| MS.gene053173 | MS.gene48406 | 0.829427 | 5.18E-55 | -1.69E-46 |
| MS.gene053348 | MS.gene48406 | 0.834224 | 3.39E-56 | -1.69E-46 |
| MS.gene053416 | MS.gene48406 | 0.845293 | 4.45E-59 | -1.69E-46 |
| MS.gene053417 | MS.gene48406 | 0.844517 | 7.20E-59 | -1.69E-46 |
| MS.gene05369 | MS.gene48406 | 0.807723 | 4.40E-50 | -1.69E-46 |
| MS.gene054551 | MS.gene48406 | 0.831098 | 2.02E-55 | -1.69E-46 |
| MS.gene054593 | MS.gene48406 | 0.821883 | 3.19E-53 | -1.69E-46 |
| MS.gene054643 | MS.gene48406 | 0.813084 | 3.06E-51 | -1.69E-46 |
| MS.gene054885 | MS.gene48406 | 0.802786 | 4.76E-49 | -1.69E-46 |
| MS.gene055308 | MS.gene48406 | 0.847496 | 1.11E-59 | -1.69E-46 |
| MS.gene055411 | MS.gene48406 | 0.821296 | 4.35E-53 | -1.69E-46 |
| MS.gene055578 | MS.gene48406 | 0.842162 | 3.06E-58 | -1.69E-46 |
| MS.gene055579 | MS.gene48406 | 0.800514 | 1.39E-48 | -1.69E-46 |
| MS.gene055957 | MS.gene48406 | 0.850207 | 1.97E-60 | -1.69E-46 |
| MS.gene056041 | MS.gene48406 | 0.878566 | 2.53E-69 | -1.69E-46 |
| MS.gene056042 | MS.gene48406 | 0.833169 | 6.22E-56 | -1.69E-46 |
| MS.gene05640 | MS.gene48406 | 0.84986 | 2.47E-60 | -1.69E-46 |
| MS.gene056526 | MS.gene48406 | 0.833188 | 6.16E-56 | -1.69E-46 |
| MS.gene057458 | MS.gene48406 | 0.835496 | 1.62E-56 | -1.69E-46 |
| MS.gene058128 | MS.gene48406 | 0.804854 | 1.77E-49 | -1.69E-46 |
| MS.gene058818 | MS.gene48406 | 0.817896 | 2.60E-52 | -1.69E-46 |
| MS.gene058853 | MS.gene48406 | 0.817811 | 2.72E-52 | -1.69E-46 |
| MS.gene059300 | MS.gene48406 | 0.839789 | 1.28E-57 | -1.69E-46 |
| MS.gene059553 | MS.gene48406 | 0.853276 | 2.66E-61 | -1.69E-46 |
| MS.gene060473 | MS.gene48406 | 0.892091 | 2.18E-74 | -1.69E-46 |
| MS.gene060565 | MS.gene48406 | 0.880266 | 6.32E-70 | -1.69E-46 |
| MS.gene06057 | MS.gene48406 | 0.825733 | 3.99E-54 | -1.69E-46 |
| MS.gene06093 | MS.gene48406 | 0.863792 | 1.93E-64 | -1.69E-46 |
| MS.gene061099 | MS.gene48406 | 0.858784 | 6.50E-63 | -1.69E-46 |
| MS.gene061260 | MS.gene48406 | 0.858175 | 9.86E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48406.t1 | MTR_3g100230 | 95.551 | 472 | 19 | 2 | 1 | 470 | 1 | 472 | 0.0 | 846 |
| MS.gene48406.t1 | MTR_3g100230 | 81.655 | 278 | 50 | 1 | 204 | 480 | 461 | 738 | 2.85e-146 | 436 |
| MS.gene48406.t1 | MTR_3g100270 | 54.661 | 236 | 102 | 2 | 24 | 254 | 568 | 803 | 9.71e-62 | 218 |
| MS.gene48406.t1 | MTR_5g066320 | 54.936 | 233 | 93 | 3 | 24 | 251 | 584 | 809 | 2.53e-58 | 208 |
| MS.gene48406.t1 | MTR_5g066320 | 42.520 | 127 | 62 | 6 | 351 | 477 | 1050 | 1165 | 5.90e-11 | 65.5 |
| MS.gene48406.t1 | MTR_3g102170 | 45.726 | 234 | 116 | 2 | 24 | 246 | 523 | 756 | 4.49e-41 | 157 |
| MS.gene48406.t1 | MTR_1g018940 | 43.830 | 235 | 121 | 3 | 24 | 247 | 523 | 757 | 4.12e-40 | 154 |
| MS.gene48406.t1 | MTR_4g094882 | 42.060 | 233 | 124 | 3 | 26 | 247 | 535 | 767 | 2.42e-34 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48406.t1 | AT5G33300 | 35.062 | 482 | 247 | 14 | 2 | 465 | 3 | 436 | 4.27e-60 | 204 |
| MS.gene48406.t1 | AT5G60930 | 49.356 | 233 | 113 | 2 | 24 | 251 | 584 | 816 | 3.91e-54 | 196 |
| MS.gene48406.t1 | AT5G60930 | 42.105 | 133 | 65 | 4 | 358 | 478 | 1072 | 1204 | 5.23e-20 | 94.4 |
| MS.gene48406.t1 | AT5G60930 | 49.356 | 233 | 113 | 2 | 24 | 251 | 584 | 816 | 4.96e-54 | 196 |
| MS.gene48406.t1 | AT5G60930 | 46.535 | 101 | 42 | 4 | 358 | 446 | 1072 | 1172 | 1.31e-15 | 80.5 |
| MS.gene48406.t1 | AT5G60930 | 49.356 | 233 | 113 | 2 | 24 | 251 | 584 | 816 | 5.80e-54 | 196 |
| MS.gene48406.t1 | AT5G60930 | 42.105 | 133 | 65 | 4 | 358 | 478 | 1072 | 1204 | 5.00e-20 | 94.4 |
| MS.gene48406.t1 | AT5G47820 | 42.553 | 235 | 122 | 5 | 24 | 247 | 537 | 769 | 5.15e-37 | 145 |
| MS.gene48406.t1 | AT5G47820 | 42.553 | 235 | 122 | 5 | 24 | 247 | 537 | 769 | 5.15e-37 | 145 |
| MS.gene48406.t1 | AT3G50240 | 38.075 | 239 | 137 | 3 | 24 | 251 | 535 | 773 | 9.47e-32 | 130 |
| MS.gene48406.t1 | AT3G50240 | 38.075 | 239 | 137 | 3 | 24 | 251 | 540 | 778 | 1.03e-31 | 129 |
| MS.gene48406.t1 | AT3G50240 | 38.866 | 247 | 124 | 6 | 24 | 251 | 438 | 676 | 1.07e-31 | 129 |
| MS.gene48406.t1 | AT3G50240 | 38.075 | 239 | 137 | 3 | 24 | 251 | 540 | 778 | 1.25e-31 | 129 |
Find 82 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGATATTCAAGATTTAA+AGG | 0.253115 | 3.1:-79693806 | MS.gene48406:CDS |
| TTCTAACCAGACGCTTAAAA+TGG | 0.271927 | 3.1:-79695884 | MS.gene48406:intron |
| CATTCTGAATTCTCTGATTT+CGG | 0.286686 | 3.1:+79693289 | None:intergenic |
| ACTTGAAAAGGAAGTTCTTC+AGG | 0.301419 | 3.1:-79696155 | MS.gene48406:intron |
| TCAGTTGAACCGCTCATTCC+GGG | 0.325438 | 3.1:+79693496 | None:intergenic |
| TTCAGTTGAACCGCTCATTC+CGG | 0.336799 | 3.1:+79693495 | None:intergenic |
| TGCCAGTCGCAGAGACAATC+AGG | 0.345557 | 3.1:-79693191 | MS.gene48406:CDS |
| AAGCTGAATTACCGGCTTCC+TGG | 0.352374 | 3.1:+79692913 | None:intergenic |
| ACGAGAGAACAAAGCGTATC+AGG | 0.355852 | 3.1:-79697169 | MS.gene48406:intron |
| CCGAACCTGCTTCATTTCTC+TGG | 0.361082 | 3.1:+79693720 | None:intergenic |
| TGAAGAATACCAGTGAGTTC+TGG | 0.378241 | 3.1:+79693140 | None:intergenic |
| TTGGTAACAAGCTGAATTAC+CGG | 0.378752 | 3.1:+79692905 | None:intergenic |
| AATCCTTCTCGGGGCTGTTA+AGG | 0.386658 | 3.1:+79693830 | None:intergenic |
| GCTGAATTTACTTGAAGATC+AGG | 0.391770 | 3.1:-79696540 | MS.gene48406:intron |
| CAGGTTCTAAGTGCACAAAT+AGG | 0.393864 | 3.1:-79693345 | MS.gene48406:CDS |
| AAGTAACGGCAAGAATAAAC+TGG | 0.410910 | 3.1:-79693524 | MS.gene48406:CDS |
| ATGCAAGGCTTTACTTGAAA+AGG | 0.413670 | 3.1:-79696167 | MS.gene48406:CDS |
| AATATCATCAAAATCCTTCT+CGG | 0.414339 | 3.1:+79693819 | None:intergenic |
| GCTATATTAAATCGTTCATC+TGG | 0.416606 | 3.1:-79695671 | MS.gene48406:intron |
| TTTCCTATGAGTTGAAAATT+GGG | 0.418572 | 3.1:+79696400 | None:intergenic |
| GGGAAGAAGGAATGAAATAA+AGG | 0.424569 | 3.1:-79695923 | MS.gene48406:CDS |
| GATTCTTCGGCTTCTAATGA+TGG | 0.434654 | 3.1:-79696596 | MS.gene48406:CDS |
| AAGTGCACTCTCTAGTAGTT+TGG | 0.440255 | 3.1:+79693225 | None:intergenic |
| AAGAAGAAGTTGAGATGCAC+AGG | 0.441019 | 3.1:-79694007 | MS.gene48406:CDS |
| ACAAAAGGGGAATGATTCTT+CGG | 0.444354 | 3.1:-79696609 | MS.gene48406:CDS |
| ATATCATCAAAATCCTTCTC+GGG | 0.445394 | 3.1:+79693820 | None:intergenic |
| TCTAAATAATCAGCTTAAGA+AGG | 0.449925 | 3.1:-79695947 | MS.gene48406:intron |
| CCCCTGATTGTCTCTGCGAC+TGG | 0.449995 | 3.1:+79693189 | None:intergenic |
| TACTTCAAGGTCTCAGTCAC+AGG | 0.455785 | 3.1:-79693860 | MS.gene48406:intron |
| TGATTGTCTCTGCGACTGGC+AGG | 0.456224 | 3.1:+79693193 | None:intergenic |
| AGTTGAGGACATTGGATCCT+TGG | 0.460985 | 3.1:+79692886 | None:intergenic |
| TTCCACCGGTGGATCGGCAT+TGG | 0.470232 | 3.1:+79693392 | None:intergenic |
| AGGTTCTAAGTGCACAAATA+GGG | 0.475573 | 3.1:-79693344 | MS.gene48406:CDS |
| AAATAAAGGCTCACAGTTTG+CGG | 0.477517 | 3.1:-79695909 | MS.gene48406:CDS |
| CACAGCTTCCACCGGTGGAT+CGG | 0.477769 | 3.1:+79693386 | None:intergenic |
| AGCTTAAGAAGGAGGGAAGA+AGG | 0.499424 | 3.1:-79695936 | MS.gene48406:CDS |
| GAACAAGTAAACAACCTTAG+TGG | 0.503189 | 3.1:-79693784 | MS.gene48406:CDS |
| GAGTTCTGGATGTCACATAA+TGG | 0.506154 | 3.1:+79693154 | None:intergenic |
| TCAGAGTTTGAAAGCTCAGA+AGG | 0.511020 | 3.1:-79696339 | MS.gene48406:intron |
| ATTCTTTAAGTAGACCACTA+AGG | 0.514987 | 3.1:+79693770 | None:intergenic |
| GGACCATCATGTGGCTGCAC+AGG | 0.518820 | 3.1:-79693364 | MS.gene48406:CDS |
| GAATGCTCTACGAATAAAGA+TGG | 0.520005 | 3.1:-79693271 | MS.gene48406:CDS |
| TAGATGCTCAAAAGCTAGGC+CGG | 0.535709 | 3.1:-79692946 | MS.gene48406:CDS |
| TCGGAAGGTGATGCATCGAT+TGG | 0.540375 | 3.1:+79697237 | None:intergenic |
| TTTCTTCAGAAAGAAGATCC+AGG | 0.542559 | 3.1:+79693545 | None:intergenic |
| AATTTGGTAGACTGAGATTG+AGG | 0.543775 | 3.1:-79696642 | MS.gene48406:intron |
| AATATAGATGCTCAAAAGCT+AGG | 0.549130 | 3.1:-79692950 | MS.gene48406:CDS |
| CTTCTTTCTGAAGAAAGTAA+CGG | 0.550584 | 3.1:-79693538 | MS.gene48406:CDS |
| AAAGAGAAAGAGCACGTGAA+GGG | 0.552628 | 3.1:-79693462 | MS.gene48406:CDS |
| AGGTGATGCATCGATTGGAC+TGG | 0.555707 | 3.1:+79697242 | None:intergenic |
| TAAAGAATTGCAATTGCGGA+AGG | 0.556691 | 3.1:-79693755 | MS.gene48406:CDS |
| AAGTGCCAATGCCGATCCAC+CGG | 0.558646 | 3.1:-79693397 | MS.gene48406:CDS |
| AAATAATCAGCTTAAGAAGG+AGG | 0.573715 | 3.1:-79695944 | MS.gene48406:intron |
| AAGAATAAACTGGATATCCC+CGG | 0.582145 | 3.1:-79693514 | MS.gene48406:CDS |
| CTGGATATCCCCGGAATGAG+CGG | 0.584017 | 3.1:-79693505 | MS.gene48406:CDS |
| GCCAGTCGCAGAGACAATCA+GGG | 0.585574 | 3.1:-79693190 | MS.gene48406:CDS |
| TACTTAAAGAATTGCAATTG+CGG | 0.587536 | 3.1:-79693759 | MS.gene48406:CDS |
| GAACCTGTGCAGCCACATGA+TGG | 0.587999 | 3.1:+79693361 | None:intergenic |
| AATAATCAGCTTAAGAAGGA+GGG | 0.594152 | 3.1:-79695943 | MS.gene48406:intron |
| CGATCCACCGGTGGAAGCTG+TGG | 0.597535 | 3.1:-79693385 | MS.gene48406:CDS |
| TGATGGTCCACAGCTTCCAC+CGG | 0.600139 | 3.1:+79693378 | None:intergenic |
| AAAAGCAACATTACGAAGAG+AGG | 0.600323 | 3.1:-79697206 | MS.gene48406:CDS |
| TGGTCCACAGCTTCCACCGG+TGG | 0.602270 | 3.1:+79693381 | None:intergenic |
| TGCACAGGGAGGAAATATCA+AGG | 0.607053 | 3.1:-79693992 | MS.gene48406:intron |
| CAGTTGAACCGCTCATTCCG+GGG | 0.607341 | 3.1:+79693497 | None:intergenic |
| ATGTGACATCCAGAACTCAC+TGG | 0.607514 | 3.1:-79693149 | MS.gene48406:intron |
| TGTGCGATTCAGATTATGCA+AGG | 0.607564 | 3.1:-79696182 | MS.gene48406:CDS |
| AGACCTTAACAGCCCCGAGA+AGG | 0.608317 | 3.1:-79693833 | MS.gene48406:CDS |
| GGTAATTCAGCTTGTTACCA+AGG | 0.609156 | 3.1:-79692903 | MS.gene48406:CDS |
| TGATTCCAGAGAAATGAAGC+AGG | 0.614230 | 3.1:-79693725 | MS.gene48406:intron |
| AAAAGAGAAAGAGCACGTGA+AGG | 0.619157 | 3.1:-79693463 | MS.gene48406:CDS |
| TGCCAATGCCGATCCACCGG+TGG | 0.639265 | 3.1:-79693394 | MS.gene48406:CDS |
| GCACTTTGTAGTCTTGCACA+AGG | 0.652067 | 3.1:+79693414 | None:intergenic |
| GGAAGCTGTGGACCATCATG+TGG | 0.660549 | 3.1:-79693373 | MS.gene48406:CDS |
| TGCTCTACGAATAAAGATGG+AGG | 0.662555 | 3.1:-79693268 | MS.gene48406:CDS |
| TATCATCAAAATCCTTCTCG+GGG | 0.672288 | 3.1:+79693821 | None:intergenic |
| TAGGGAACCACTGAAATCAG+TGG | 0.673171 | 3.1:-79693326 | MS.gene48406:CDS |
| CCAGTCGCAGAGACAATCAG+GGG | 0.680822 | 3.1:-79693189 | MS.gene48406:CDS |
| AGAAGAAGTTGAGATGCACA+GGG | 0.686394 | 3.1:-79694006 | MS.gene48406:CDS |
| GGTATTGCAACGAAAGACTG+AGG | 0.702858 | 3.1:-79695744 | MS.gene48406:CDS |
| ACATAACTTGTGCAACTGAG+TGG | 0.718792 | 3.1:+79695079 | None:intergenic |
| AGAAGTTGAGATGCACAGGG+AGG | 0.719950 | 3.1:-79694003 | MS.gene48406:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGTAATATGAATAAAAA+AGG | + | chr3.1:79694361-79694380 | None:intergenic | 10.0% |
| !! | TTAAAACAAGTAATTTATTA+TGG | - | chr3.1:79696501-79696520 | MS.gene48406:intron | 10.0% |
| !! | AAAAAAAACTAAAGAAGAAT+TGG | + | chr3.1:79693891-79693910 | None:intergenic | 15.0% |
| !! | TAAATTGAAGATAAATAAAG+TGG | + | chr3.1:79695633-79695652 | None:intergenic | 15.0% |
| !!! | AATCGAATAATTTTTAATCT+AGG | - | chr3.1:79693148-79693167 | MS.gene48406:intron | 15.0% |
| !!! | ATCGAATAATTTTTAATCTA+GGG | - | chr3.1:79693149-79693168 | MS.gene48406:intron | 15.0% |
| !! | ATTATGCTACTGATATTATA+TGG | - | chr3.1:79694835-79694854 | MS.gene48406:intron | 20.0% |
| !! | ATTGAGAAAAATCTTACTAA+TGG | - | chr3.1:79694064-79694083 | MS.gene48406:intron | 20.0% |
| !! | CATTCAATATTATATACTCT+CGG | - | chr3.1:79695577-79695596 | MS.gene48406:intron | 20.0% |
| !! | GTTTATTTATGTTGAATTCA+AGG | + | chr3.1:79695798-79695817 | None:intergenic | 20.0% |
| !! | TACTAATTAAGTCTTCAAAA+AGG | + | chr3.1:79694905-79694924 | None:intergenic | 20.0% |
| !! | TATCTTCAATTTAACAAGTT+GGG | - | chr3.1:79695640-79695659 | MS.gene48406:intron | 20.0% |
| !! | TGATGATATTCAAGATTTAA+AGG | - | chr3.1:79696341-79696360 | MS.gene48406:CDS | 20.0% |
| !! | TTATCTTCAATTTAACAAGT+TGG | - | chr3.1:79695639-79695658 | MS.gene48406:intron | 20.0% |
| !! | TTTACTATACTGTAAAATCA+AGG | - | chr3.1:79697105-79697124 | MS.gene48406:intron | 20.0% |
| !!! | AAGCATTTTGATTTTTCTAA+AGG | - | chr3.1:79693339-79693358 | MS.gene48406:CDS | 20.0% |
| !!! | AAGTTTCTTAGATTTTGAAT+CGG | - | chr3.1:79693106-79693125 | MS.gene48406:intron | 20.0% |
| !!! | AGCATTTTGATTTTTCTAAA+GGG | - | chr3.1:79693340-79693359 | MS.gene48406:CDS | 20.0% |
| !!! | TAAAGAAGTACAAGTAAAAT+AGG | - | chr3.1:79696538-79696557 | MS.gene48406:intron | 20.0% |
| !!! | TACTTGACCATTTTTATTTT+TGG | + | chr3.1:79694611-79694630 | None:intergenic | 20.0% |
| !!! | TGTTTATACATTTTGATGTT+AGG | + | chr3.1:79695010-79695029 | None:intergenic | 20.0% |
| !!! | TTCTAAAAAATGAAACTTAC+AGG | + | chr3.1:79695342-79695361 | None:intergenic | 20.0% |
| !!! | TTTTATTGTTTGAACTTCAA+AGG | - | chr3.1:79695479-79695498 | MS.gene48406:intron | 20.0% |
| ! | AATATCATCAAAATCCTTCT+CGG | + | chr3.1:79696331-79696350 | None:intergenic | 25.0% |
| ! | AATTATACTTTAAGTGCTCT+CGG | + | chr3.1:79695995-79696014 | None:intergenic | 25.0% |
| ! | AGACTTAATTAGTAAGACAA+AGG | - | chr3.1:79694911-79694930 | MS.gene48406:intron | 25.0% |
| ! | AGGAAATGAATGAATTTAAC+AGG | + | chr3.1:79694559-79694578 | None:intergenic | 25.0% |
| ! | ATCTGAATTGAAGAAAAAAC+TGG | - | chr3.1:79693715-79693734 | MS.gene48406:intron | 25.0% |
| ! | CAAAATGTATAAACAATGAC+TGG | - | chr3.1:79695015-79695034 | MS.gene48406:intron | 25.0% |
| ! | CTACATTACTCAAATATTTG+AGG | - | chr3.1:79695665-79695684 | MS.gene48406:intron | 25.0% |
| ! | GAGAAAAAAAAAACACATGA+CGG | + | chr3.1:79693681-79693700 | None:intergenic | 25.0% |
| ! | GTAGGTTCCAAAAATAAAAA+TGG | - | chr3.1:79694601-79694620 | MS.gene48406:intron | 25.0% |
| ! | GTATCAGCATATTTATCTTA+TGG | - | chr3.1:79694168-79694187 | MS.gene48406:intron | 25.0% |
| ! | TAAAAATGGTCAAGTAATTC+AGG | - | chr3.1:79694615-79694634 | MS.gene48406:intron | 25.0% |
| ! | TAAGTATTAATCGTAGAAGA+GGG | - | chr3.1:79693462-79693481 | MS.gene48406:CDS | 25.0% |
| ! | TACTTAAAGAATTGCAATTG+CGG | - | chr3.1:79696388-79696407 | MS.gene48406:CDS | 25.0% |
| ! | TATCTAGTATATATCCCTTT+GGG | - | chr3.1:79694142-79694161 | MS.gene48406:intron | 25.0% |
| ! | TCTAAATAATCAGCTTAAGA+AGG | - | chr3.1:79694200-79694219 | MS.gene48406:intron | 25.0% |
| ! | TCTGAATTGAAGAAAAAACT+GGG | - | chr3.1:79693716-79693735 | MS.gene48406:intron | 25.0% |
| ! | TTAAGTATTAATCGTAGAAG+AGG | - | chr3.1:79693461-79693480 | MS.gene48406:CDS | 25.0% |
| ! | TTAATTGTAATGCATATCTC+TGG | - | chr3.1:79695221-79695240 | MS.gene48406:intron | 25.0% |
| ! | TTTGCGTAAAGTTTCATTAT+AGG | - | chr3.1:79693297-79693316 | MS.gene48406:CDS | 25.0% |
| !! | AAGGTTTTGCTAGTAATTAT+TGG | + | chr3.1:79695779-79695798 | None:intergenic | 25.0% |
| !! | AATGCAAGAAAGAATTTTTC+TGG | + | chr3.1:79697056-79697075 | None:intergenic | 25.0% |
| !! | AGGTTTTGCTAGTAATTATT+GGG | + | chr3.1:79695778-79695797 | None:intergenic | 25.0% |
| !! | GATATTAGAGGATTGAATTT+TGG | - | chr3.1:79694041-79694060 | MS.gene48406:intron | 25.0% |
| !! | TGTAAACTGTATATTTTGCA+TGG | - | chr3.1:79695283-79695302 | MS.gene48406:intron | 25.0% |
| !! | TTTCCTATGAGTTGAAAATT+GGG | + | chr3.1:79693750-79693769 | None:intergenic | 25.0% |
| !!! | CTTACATGAATGTACTTTTT+TGG | - | chr3.1:79693839-79693858 | MS.gene48406:CDS | 25.0% |
| !!! | TAGCACCTATTTTAATAACT+TGG | - | chr3.1:79697076-79697095 | MS.gene48406:intron | 25.0% |
| !!! | TCTCATTTTTTTCTTACATC+AGG | - | chr3.1:79694382-79694401 | MS.gene48406:intron | 25.0% |
| !!! | TCTCTTACTTTTGATATTAG+AGG | - | chr3.1:79694029-79694048 | MS.gene48406:CDS | 25.0% |
| !!! | TTTTCCTATGAGTTGAAAAT+TGG | + | chr3.1:79693751-79693770 | None:intergenic | 25.0% |
| AAAGGCTGGAAATAAGTATT+AGG | + | chr3.1:79695155-79695174 | None:intergenic | 30.0% | |
| AAAGGGAATGACTTGATTTA+GGG | - | chr3.1:79693357-79693376 | MS.gene48406:CDS | 30.0% | |
| AAATAATCAGCTTAAGAAGG+AGG | - | chr3.1:79694203-79694222 | MS.gene48406:intron | 30.0% | |
| AATAAAATAACCACTTCCAC+TGG | + | chr3.1:79695466-79695485 | None:intergenic | 30.0% | |
| AATAATCAGCTTAAGAAGGA+GGG | - | chr3.1:79694204-79694223 | MS.gene48406:intron | 30.0% | |
| AATATAGATGCTCAAAAGCT+AGG | - | chr3.1:79697197-79697216 | MS.gene48406:CDS | 30.0% | |
| AGAAGATCTGAATACATGTT+TGG | - | chr3.1:79694501-79694520 | MS.gene48406:intron | 30.0% | |
| AGACCTTGAAGTAACAAAAA+AGG | + | chr3.1:79696280-79696299 | None:intergenic | 30.0% | |
| AGGAGTTGAAAAAACAAAAG+GGG | - | chr3.1:79693525-79693544 | MS.gene48406:CDS | 30.0% | |
| ATATCATCAAAATCCTTCTC+GGG | + | chr3.1:79696330-79696349 | None:intergenic | 30.0% | |
| ATCAACTTGTGTTTACGTAT+AGG | - | chr3.1:79693911-79693930 | MS.gene48406:intron | 30.0% | |
| ATCACTCTAATTTGATGTTG+TGG | - | chr3.1:79696246-79696265 | MS.gene48406:intron | 30.0% | |
| ATCAGTAGCATAATCATGAT+TGG | + | chr3.1:79694829-79694848 | None:intergenic | 30.0% | |
| ATGATTCTATGACCAATGTT+CGG | + | chr3.1:79694761-79694780 | None:intergenic | 30.0% | |
| ATTCTTTAAGTAGACCACTA+AGG | + | chr3.1:79696380-79696399 | None:intergenic | 30.0% | |
| ATTGGACACATTCTCAAATA+CGG | + | chr3.1:79694811-79694830 | None:intergenic | 30.0% | |
| CAAATTAGAGTGATCTACTA+TGG | + | chr3.1:79696240-79696259 | None:intergenic | 30.0% | |
| CACTTCTAATTTGATGTCAA+TGG | + | chr3.1:79696454-79696473 | None:intergenic | 30.0% | |
| CTCAGCCAAGTTATTAAAAT+AGG | + | chr3.1:79697084-79697103 | None:intergenic | 30.0% | |
| CTTAAACTACTGATGTAGTA+TGG | + | chr3.1:79695859-79695878 | None:intergenic | 30.0% | |
| GACCTTGAAGTAACAAAAAA+GGG | + | chr3.1:79696279-79696298 | None:intergenic | 30.0% | |
| GAGGAGTTGAAAAAACAAAA+GGG | - | chr3.1:79693524-79693543 | MS.gene48406:CDS | 30.0% | |
| GCTATATTAAATCGTTCATC+TGG | - | chr3.1:79694476-79694495 | MS.gene48406:intron | 30.0% | |
| GCTGAAGTTTGTGTATATTT+CGG | - | chr3.1:79695541-79695560 | MS.gene48406:CDS | 30.0% | |
| GTATCTAGTATATATCCCTT+TGG | - | chr3.1:79694141-79694160 | MS.gene48406:intron | 30.0% | |
| TAAAGGGAATGACTTGATTT+AGG | - | chr3.1:79693356-79693375 | MS.gene48406:CDS | 30.0% | |
| TACTTATTTCCAGCCTTTAT+AGG | - | chr3.1:79695157-79695176 | MS.gene48406:intron | 30.0% | |
| TCATTTACTAGGACATGTTA+AGG | - | chr3.1:79694777-79694796 | MS.gene48406:intron | 30.0% | |
| TGAGGAGTTGAAAAAACAAA+AGG | - | chr3.1:79693523-79693542 | MS.gene48406:CDS | 30.0% | |
| TGGTCATAGAATCATTTACT+AGG | - | chr3.1:79694766-79694785 | MS.gene48406:intron | 30.0% | |
| TGTTGGAAATGTATATTGCA+TGG | - | chr3.1:79694941-79694960 | MS.gene48406:intron | 30.0% | |
| TTTAGGCAACTGAATTTGAT+TGG | - | chr3.1:79695713-79695732 | MS.gene48406:CDS | 30.0% | |
| ! | AATCCCAATTTTCAACTCAT+AGG | - | chr3.1:79693744-79693763 | MS.gene48406:CDS | 30.0% |
| ! | AGCATAACTGTGTTAGATTT+TGG | - | chr3.1:79695504-79695523 | MS.gene48406:intron | 30.0% |
| ! | CTTCTTTCTGAAGAAAGTAA+CGG | - | chr3.1:79696609-79696628 | MS.gene48406:CDS | 30.0% |
| ! | GCATAACTGTGTTAGATTTT+GGG | - | chr3.1:79695505-79695524 | MS.gene48406:intron | 30.0% |
| ! | TACTGTAAAATCAAGGTATC+TGG | - | chr3.1:79697112-79697131 | MS.gene48406:intron | 30.0% |
| ! | TCACATAATGGCTTCTTTTT+GGG | + | chr3.1:79696984-79697003 | None:intergenic | 30.0% |
| ! | TTATGACCTTTTATCTCTCA+TGG | - | chr3.1:79694315-79694334 | MS.gene48406:intron | 30.0% |
| !! | AGGTAAACATTAGTTTGCAT+TGG | - | chr3.1:79693627-79693646 | MS.gene48406:intron | 30.0% |
| !! | TGAGACTTACTTTTCGATAT+TGG | + | chr3.1:79695107-79695126 | None:intergenic | 30.0% |
| !! | TTTATTGGTGCTGTGTAATT+TGG | - | chr3.1:79693489-79693508 | MS.gene48406:CDS | 30.0% |
| !!! | GATGTTATTTTTACTGTCAC+TGG | - | chr3.1:79694694-79694713 | MS.gene48406:intron | 30.0% |
| AAAAGCAACATTACGAAGAG+AGG | - | chr3.1:79692941-79692960 | MS.gene48406:CDS | 35.0% | |
| AAATAAAGGCTCACAGTTTG+CGG | - | chr3.1:79694238-79694257 | MS.gene48406:intron | 35.0% | |
| AACTGAATTTGATTGGTGTG+GGG | - | chr3.1:79695720-79695739 | MS.gene48406:CDS | 35.0% | |
| AAGAATAAACTGGATATCCC+CGG | - | chr3.1:79696633-79696652 | MS.gene48406:CDS | 35.0% | |
| AAGTAACGGCAAGAATAAAC+TGG | - | chr3.1:79696623-79696642 | MS.gene48406:CDS | 35.0% | |
| AATTTGGTAGACTGAGATTG+AGG | - | chr3.1:79693505-79693524 | MS.gene48406:CDS | 35.0% | |
| ACAAAAGGGGAATGATTCTT+CGG | - | chr3.1:79693538-79693557 | MS.gene48406:CDS | 35.0% | |
| ACAGTGCTCAAGTATCTTAT+TGG | - | chr3.1:79694091-79694110 | MS.gene48406:intron | 35.0% | |
| ACTTGAAAAGGAAGTTCTTC+AGG | - | chr3.1:79693992-79694011 | MS.gene48406:intron | 35.0% | |
| AGTCTGTTGAAGACCTATAA+AGG | + | chr3.1:79695173-79695192 | None:intergenic | 35.0% | |
| ATATGCTGATACTAACCCAA+AGG | + | chr3.1:79694160-79694179 | None:intergenic | 35.0% | |
| ATGCAAGGCTTTACTTGAAA+AGG | - | chr3.1:79693980-79693999 | MS.gene48406:intron | 35.0% | |
| ATTGTAATGCATATCTCTGG+TGG | - | chr3.1:79695224-79695243 | MS.gene48406:intron | 35.0% | |
| CAACTGAATTTGATTGGTGT+GGG | - | chr3.1:79695719-79695738 | MS.gene48406:CDS | 35.0% | |
| CAATTTCATCACGCATTGTT+TGG | - | chr3.1:79693011-79693030 | MS.gene48406:intron | 35.0% | |
| CATGCTCATAAAACGAGAAA+TGG | + | chr3.1:79695917-79695936 | None:intergenic | 35.0% | |
| CTGGAAATAAGTATTAGGCA+AGG | + | chr3.1:79695150-79695169 | None:intergenic | 35.0% | |
| GAACAAGTAAACAACCTTAG+TGG | - | chr3.1:79696363-79696382 | MS.gene48406:CDS | 35.0% | |
| GAATGCTCTACGAATAAAGA+TGG | - | chr3.1:79696876-79696895 | MS.gene48406:intron | 35.0% | |
| GCTGAATTTACTTGAAGATC+AGG | - | chr3.1:79693607-79693626 | MS.gene48406:intron | 35.0% | |
| GGGAAGAAGGAATGAAATAA+AGG | - | chr3.1:79694224-79694243 | MS.gene48406:intron | 35.0% | |
| GTAGAAGAGGGATTGTTTAT+TGG | - | chr3.1:79693474-79693493 | MS.gene48406:CDS | 35.0% | |
| GTTGCTTGTTTATTAAACCG+TGG | - | chr3.1:79696560-79696579 | MS.gene48406:CDS | 35.0% | |
| TAAAGAATTGCAATTGCGGA+AGG | - | chr3.1:79696392-79696411 | MS.gene48406:CDS | 35.0% | |
| TATCATCAAAATCCTTCTCG+GGG | + | chr3.1:79696329-79696348 | None:intergenic | 35.0% | |
| TATGCTGATACTAACCCAAA+GGG | + | chr3.1:79694159-79694178 | None:intergenic | 35.0% | |
| TGAATCAAAAGCTTCAACAC+CGG | - | chr3.1:79695831-79695850 | MS.gene48406:intron | 35.0% | |
| TTAAGTGCTCTCGGATTATA+GGG | + | chr3.1:79695986-79696005 | None:intergenic | 35.0% | |
| TTAGGCAAGGAAGAGAATAT+CGG | + | chr3.1:79695137-79695156 | None:intergenic | 35.0% | |
| TTCTAACCAGACGCTTAAAA+TGG | - | chr3.1:79694263-79694282 | MS.gene48406:intron | 35.0% | |
| TTGGACACATTCTCAAATAC+GGG | + | chr3.1:79694810-79694829 | None:intergenic | 35.0% | |
| TTGTAATGCATATCTCTGGT+GGG | - | chr3.1:79695225-79695244 | MS.gene48406:intron | 35.0% | |
| TTTAAGTGCTCTCGGATTAT+AGG | + | chr3.1:79695987-79696006 | None:intergenic | 35.0% | |
| TTTCTTCAGAAAGAAGATCC+AGG | + | chr3.1:79696605-79696624 | None:intergenic | 35.0% | |
| ! | ACTTTGTTTCCTTTCCACTT+TGG | - | chr3.1:79694735-79694754 | MS.gene48406:intron | 35.0% |
| ! | CTTTTGCGCAACTTTATGTT+GGG | - | chr3.1:79695375-79695394 | MS.gene48406:intron | 35.0% |
| ! | GTCACATAATGGCTTCTTTT+TGG | + | chr3.1:79696985-79697004 | None:intergenic | 35.0% |
| ! | TCTTTTGCGCAACTTTATGT+TGG | - | chr3.1:79695374-79695393 | MS.gene48406:intron | 35.0% |
| ! | TTGGTAACAAGCTGAATTAC+CGG | + | chr3.1:79697245-79697264 | None:intergenic | 35.0% |
| ! | TTTGGAACCTACATGAGAAA+CGG | + | chr3.1:79694593-79694612 | None:intergenic | 35.0% |
| ! | TTTTGCGCAACTTTATGTTG+GGG | - | chr3.1:79695376-79695395 | MS.gene48406:intron | 35.0% |
| !! | AGGTTCTAAGTGCACAAATA+GGG | - | chr3.1:79696803-79696822 | MS.gene48406:intron | 35.0% |
| !! | AGTTTTTAAAAGCTGACCAG+TGG | - | chr3.1:79695447-79695466 | MS.gene48406:intron | 35.0% |
| !! | CTTATTCAAGAGGCACTTAT+TGG | - | chr3.1:79695749-79695768 | MS.gene48406:intron | 35.0% |
| !! | GTGTTGAAGCTTTTGATTCA+TGG | + | chr3.1:79695831-79695850 | None:intergenic | 35.0% |
| !!! | ATGTTGCTTTTCGTTTGAGT+CGG | + | chr3.1:79692932-79692951 | None:intergenic | 35.0% |
| !!! | CTCCCTTTTTTGTTACTTCA+AGG | - | chr3.1:79696274-79696293 | MS.gene48406:intron | 35.0% |
| AAGAAGAAGTTGAGATGCAC+AGG | - | chr3.1:79696140-79696159 | MS.gene48406:intron | 40.0% | |
| AAGTGCACTCTCTAGTAGTT+TGG | + | chr3.1:79696925-79696944 | None:intergenic | 40.0% | |
| AGAAGAAGTTGAGATGCACA+GGG | - | chr3.1:79696141-79696160 | MS.gene48406:intron | 40.0% | |
| ATAGTACTGTCTACGCATAC+TGG | + | chr3.1:79695950-79695969 | None:intergenic | 40.0% | |
| ATATTCTAATCAGCAGGACC+TGG | - | chr3.1:79696584-79696603 | MS.gene48406:CDS | 40.0% | |
| CACGTGACAATTTGATTGCA+GGG | - | chr3.1:79697173-79697192 | MS.gene48406:CDS | 40.0% | |
| CAGTAGCCTGATTAACATGT+AGG | - | chr3.1:79694984-79695003 | MS.gene48406:intron | 40.0% | |
| CATACAAGCGGTTAGAATAG+AGG | + | chr3.1:79696089-79696108 | None:intergenic | 40.0% | |
| CCACAACCATGAGAGATAAA+AGG | + | chr3.1:79694324-79694343 | None:intergenic | 40.0% | |
| CTACTGATGTAGTATGGAAC+CGG | + | chr3.1:79695853-79695872 | None:intergenic | 40.0% | |
| CTAGGACATGTTAAGGTTTG+TGG | - | chr3.1:79694784-79694803 | MS.gene48406:intron | 40.0% | |
| CTCTATTCTAACCGCTTGTA+TGG | - | chr3.1:79696087-79696106 | MS.gene48406:intron | 40.0% | |
| CTGTTAGAGACTTCGATTAG+AGG | - | chr3.1:79695605-79695624 | MS.gene48406:intron | 40.0% | |
| GAAAAAGAATACCAGGAAGC+CGG | - | chr3.1:79697223-79697242 | MS.gene48406:CDS | 40.0% | |
| GAGAAACGGCAAAGAAAGAA+AGG | + | chr3.1:79694579-79694598 | None:intergenic | 40.0% | |
| GATTCTTCGGCTTCTAATGA+TGG | - | chr3.1:79693551-79693570 | MS.gene48406:intron | 40.0% | |
| GCAACTGAATTTGATTGGTG+TGG | - | chr3.1:79695718-79695737 | MS.gene48406:CDS | 40.0% | |
| GGGGAAGAAACTTATTCAAG+AGG | - | chr3.1:79695739-79695758 | MS.gene48406:CDS | 40.0% | |
| GGTGACTAAGATCAGAGTTA+TGG | + | chr3.1:79697035-79697054 | None:intergenic | 40.0% | |
| GTATAAACAATGACTGGTGC+AGG | - | chr3.1:79695021-79695040 | MS.gene48406:intron | 40.0% | |
| GTTAGGCCTACATGTTAATC+AGG | + | chr3.1:79694993-79695012 | None:intergenic | 40.0% | |
| TCAGAGTTTGAAAGCTCAGA+AGG | - | chr3.1:79693808-79693827 | MS.gene48406:CDS | 40.0% | |
| TGAAGAATACCAGTGAGTTC+TGG | + | chr3.1:79697010-79697029 | None:intergenic | 40.0% | |
| TGATTCCAGAGAAATGAAGC+AGG | - | chr3.1:79696422-79696441 | MS.gene48406:CDS | 40.0% | |
| TGCTCTACGAATAAAGATGG+AGG | - | chr3.1:79696879-79696898 | MS.gene48406:intron | 40.0% | |
| TGTGCGATTCAGATTATGCA+AGG | - | chr3.1:79693965-79693984 | MS.gene48406:intron | 40.0% | |
| TGTTGAAGACCTATAAAGGC+TGG | + | chr3.1:79695169-79695188 | None:intergenic | 40.0% | |
| ! | AAAAGAGAAAGAGCACGTGA+AGG | - | chr3.1:79696684-79696703 | MS.gene48406:intron | 40.0% |
| ! | AAAGAGAAAGAGCACGTGAA+GGG | - | chr3.1:79696685-79696704 | MS.gene48406:intron | 40.0% |
| ! | AACGAACCATTTTAAGCGTC+TGG | + | chr3.1:79694272-79694291 | None:intergenic | 40.0% |
| ! | ACATAACTTGTGCAACTGAG+TGG | + | chr3.1:79695071-79695090 | None:intergenic | 40.0% |
| ! | ACGTGGATTAATGACCAAGT+TGG | + | chr3.1:79697158-79697177 | None:intergenic | 40.0% |
| ! | CCTTTTATCTCTCATGGTTG+TGG | - | chr3.1:79694321-79694340 | MS.gene48406:intron | 40.0% |
| ! | CGTGGATTAATGACCAAGTT+GGG | + | chr3.1:79697157-79697176 | None:intergenic | 40.0% |
| ! | CTGCTGATTAGAATATGCCA+CGG | + | chr3.1:79696580-79696599 | None:intergenic | 40.0% |
| ! | GCTTCCTGGTATTCTTTTTC+CGG | + | chr3.1:79697223-79697242 | None:intergenic | 40.0% |
| ! | TGAGGTATTAGTAGCTTGCA+CGG | - | chr3.1:79695683-79695702 | MS.gene48406:CDS | 40.0% |
| ! | TTCTTTGCCGTTTCTCATGT+AGG | - | chr3.1:79694583-79694602 | MS.gene48406:intron | 40.0% |
| !! | AAGACAAAGGCTGTTTCTGT+TGG | - | chr3.1:79694924-79694943 | MS.gene48406:intron | 40.0% |
| !! | CAGGTTCTAAGTGCACAAAT+AGG | - | chr3.1:79696802-79696821 | MS.gene48406:intron | 40.0% |
| !! | GAGTTCTGGATGTCACATAA+TGG | + | chr3.1:79696996-79697015 | None:intergenic | 40.0% |
| !! | GGTAATTCAGCTTGTTACCA+AGG | - | chr3.1:79697244-79697263 | MS.gene48406:CDS | 40.0% |
| !!! | GGCTAAATGCTGTTTTCTGA+TGG | - | chr3.1:79695304-79695323 | MS.gene48406:intron | 40.0% |
| !!! | TTTTCTGCCACTGATTTCAG+TGG | + | chr3.1:79696831-79696850 | None:intergenic | 40.0% |
| !!! | TTTTCTGGAGTTGAGGACAT+TGG | + | chr3.1:79697272-79697291 | None:intergenic | 40.0% |
| !!! | TTTTTTTCTCGTGCTGTTGC+AGG | - | chr3.1:79693691-79693710 | MS.gene48406:intron | 40.0% |
| AATGTTCGGCCAAAGTGGAA+AGG | + | chr3.1:79694747-79694766 | None:intergenic | 45.0% | |
| ACGAGAGAACAAAGCGTATC+AGG | - | chr3.1:79692978-79692997 | MS.gene48406:intron | 45.0% | |
| AGCTTAAGAAGGAGGGAAGA+AGG | - | chr3.1:79694211-79694230 | MS.gene48406:intron | 45.0% | |
| AGTCATCCTGACCATACAAG+CGG | + | chr3.1:79696101-79696120 | None:intergenic | 45.0% | |
| AGTTGAGGACATTGGATCCT+TGG | + | chr3.1:79697264-79697283 | None:intergenic | 45.0% | |
| ATGTGACATCCAGAACTCAC+TGG | - | chr3.1:79696998-79697017 | MS.gene48406:intron | 45.0% | |
| ATTGCTTGACTTCTACGAGC+TGG | - | chr3.1:79696209-79696228 | MS.gene48406:CDS | 45.0% | |
| CCACGTGACAATTTGATTGC+AGG | - | chr3.1:79697172-79697191 | MS.gene48406:CDS | 45.0% | |
| CCAGAGAAATGAAGCAGGTT+CGG | - | chr3.1:79696427-79696446 | MS.gene48406:CDS | 45.0% | |
| CCTGCAATCAAATTGTCACG+TGG | + | chr3.1:79697175-79697194 | None:intergenic | 45.0% | |
| CGTGGCATATTCTAATCAGC+AGG | - | chr3.1:79696578-79696597 | MS.gene48406:CDS | 45.0% | |
| GGTATTGCAACGAAAGACTG+AGG | - | chr3.1:79694403-79694422 | MS.gene48406:intron | 45.0% | |
| TAAAAGCTGACCAGTGGAAG+TGG | - | chr3.1:79695453-79695472 | MS.gene48406:intron | 45.0% | |
| TACTTCAAGGTCTCAGTCAC+AGG | - | chr3.1:79696287-79696306 | MS.gene48406:intron | 45.0% | |
| TAGATGCTCAAAAGCTAGGC+CGG | - | chr3.1:79697201-79697220 | MS.gene48406:CDS | 45.0% | |
| TAGGCCGGAAAAAGAATACC+AGG | - | chr3.1:79697216-79697235 | MS.gene48406:CDS | 45.0% | |
| TAGGGAACCACTGAAATCAG+TGG | - | chr3.1:79696821-79696840 | MS.gene48406:intron | 45.0% | |
| TGCACAGGGAGGAAATATCA+AGG | - | chr3.1:79696155-79696174 | MS.gene48406:intron | 45.0% | |
| TTCAGTTGAACCGCTCATTC+CGG | + | chr3.1:79696655-79696674 | None:intergenic | 45.0% | |
| TTCTAACCGCTTGTATGGTC+AGG | - | chr3.1:79696092-79696111 | MS.gene48406:intron | 45.0% | |
| TTTCCACTTTGGCCGAACAT+TGG | - | chr3.1:79694746-79694765 | MS.gene48406:intron | 45.0% | |
| ! | ATGCTGCAGTTTTCCCAACT+TGG | - | chr3.1:79697141-79697160 | MS.gene48406:intron | 45.0% |
| ! | CGCATTGTTTGGTTCAGATC+TGG | - | chr3.1:79693022-79693041 | MS.gene48406:intron | 45.0% |
| ! | GCACTTTGTAGTCTTGCACA+AGG | + | chr3.1:79696736-79696755 | None:intergenic | 45.0% |
| ! | GTATTAGTAGCTTGCACGGT+TGG | - | chr3.1:79695687-79695706 | MS.gene48406:CDS | 45.0% |
| ! | TGCTTTTCGTTTGAGTCGGA+AGG | + | chr3.1:79692928-79692947 | None:intergenic | 45.0% |
| !!! | GCTTGCACGGTTGGTTTTTT+AGG | - | chr3.1:79695696-79695715 | MS.gene48406:CDS | 45.0% |
| AATCCTTCTCGGGGCTGTTA+AGG | + | chr3.1:79696320-79696339 | None:intergenic | 50.0% | |
| AGAAGTTGAGATGCACAGGG+AGG | - | chr3.1:79696144-79696163 | MS.gene48406:intron | 50.0% | |
| CATGGTTGTGGCTACTCACT+TGG | - | chr3.1:79694333-79694352 | MS.gene48406:intron | 50.0% | |
| CCGAACCTGCTTCATTTCTC+TGG | + | chr3.1:79696430-79696449 | None:intergenic | 50.0% | |
| GCGCAACTTTATGTTGGGGT+GGG | - | chr3.1:79695380-79695399 | MS.gene48406:intron | 50.0% | |
| TCAGTTGAACCGCTCATTCC+GGG | + | chr3.1:79696654-79696673 | None:intergenic | 50.0% | |
| TGACCAATGTTCGGCCAAAG+TGG | + | chr3.1:79694752-79694771 | None:intergenic | 50.0% | |
| TGCGCAACTTTATGTTGGGG+TGG | - | chr3.1:79695379-79695398 | MS.gene48406:intron | 50.0% | |
| ! | TCGGAAGGTGATGCATCGAT+TGG | + | chr3.1:79692913-79692932 | None:intergenic | 50.0% |
| !! | AAGCTGAATTACCGGCTTCC+TGG | + | chr3.1:79697237-79697256 | None:intergenic | 50.0% |
| !! | AGGTGATGCATCGATTGGAC+TGG | + | chr3.1:79692908-79692927 | None:intergenic | 50.0% |
| AAGTGCCAATGCCGATCCAC+CGG | - | chr3.1:79696750-79696769 | MS.gene48406:intron | 55.0% | |
| AGACCTTAACAGCCCCGAGA+AGG | - | chr3.1:79696314-79696333 | MS.gene48406:intron | 55.0% | |
| CAGTTGAACCGCTCATTCCG+GGG | + | chr3.1:79696653-79696672 | None:intergenic | 55.0% | |
| CCAGTCGCAGAGACAATCAG+GGG | - | chr3.1:79696958-79696977 | MS.gene48406:intron | 55.0% | |
| CTGGATATCCCCGGAATGAG+CGG | - | chr3.1:79696642-79696661 | MS.gene48406:intron | 55.0% | |
| GAACCTGTGCAGCCACATGA+TGG | + | chr3.1:79696789-79696808 | None:intergenic | 55.0% | |
| GCCAGTCGCAGAGACAATCA+GGG | - | chr3.1:79696957-79696976 | MS.gene48406:intron | 55.0% | |
| GGAAGCTGTGGACCATCATG+TGG | - | chr3.1:79696774-79696793 | MS.gene48406:intron | 55.0% | |
| TGATGGTCCACAGCTTCCAC+CGG | + | chr3.1:79696772-79696791 | None:intergenic | 55.0% | |
| TGATTGTCTCTGCGACTGGC+AGG | + | chr3.1:79696957-79696976 | None:intergenic | 55.0% | |
| TGCCAGTCGCAGAGACAATC+AGG | - | chr3.1:79696956-79696975 | MS.gene48406:intron | 55.0% | |
| CACAGCTTCCACCGGTGGAT+CGG | + | chr3.1:79696764-79696783 | None:intergenic | 60.0% | |
| CCCCTGATTGTCTCTGCGAC+TGG | + | chr3.1:79696961-79696980 | None:intergenic | 60.0% | |
| GGACCATCATGTGGCTGCAC+AGG | - | chr3.1:79696783-79696802 | MS.gene48406:intron | 60.0% | |
| TTCCACCGGTGGATCGGCAT+TGG | + | chr3.1:79696758-79696777 | None:intergenic | 60.0% | |
| CGATCCACCGGTGGAAGCTG+TGG | - | chr3.1:79696762-79696781 | MS.gene48406:intron | 65.0% | |
| TGCCAATGCCGATCCACCGG+TGG | - | chr3.1:79696753-79696772 | MS.gene48406:intron | 65.0% | |
| TGGTCCACAGCTTCCACCGG+TGG | + | chr3.1:79696769-79696788 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 79692874 | 79697295 | 79692874 | ID=MS.gene48406 |
| chr3.1 | mRNA | 79692874 | 79697295 | 79692874 | ID=MS.gene48406.t1;Parent=MS.gene48406 |
| chr3.1 | exon | 79697170 | 79697295 | 79697170 | ID=MS.gene48406.t1.exon1;Parent=MS.gene48406.t1 |
| chr3.1 | CDS | 79697170 | 79697295 | 79697170 | ID=cds.MS.gene48406.t1;Parent=MS.gene48406.t1 |
| chr3.1 | exon | 79696541 | 79696654 | 79696541 | ID=MS.gene48406.t1.exon2;Parent=MS.gene48406.t1 |
| chr3.1 | CDS | 79696541 | 79696654 | 79696541 | ID=cds.MS.gene48406.t1;Parent=MS.gene48406.t1 |
| chr3.1 | exon | 79696340 | 79696456 | 79696340 | ID=MS.gene48406.t1.exon3;Parent=MS.gene48406.t1 |
| chr3.1 | CDS | 79696340 | 79696456 | 79696340 | ID=cds.MS.gene48406.t1;Parent=MS.gene48406.t1 |
| chr3.1 | exon | 79696156 | 79696236 | 79696156 | ID=MS.gene48406.t1.exon4;Parent=MS.gene48406.t1 |
| chr3.1 | CDS | 79696156 | 79696236 | 79696156 | ID=cds.MS.gene48406.t1;Parent=MS.gene48406.t1 |
| chr3.1 | exon | 79695885 | 79695956 | 79695885 | ID=MS.gene48406.t1.exon5;Parent=MS.gene48406.t1 |
| chr3.1 | CDS | 79695885 | 79695956 | 79695885 | ID=cds.MS.gene48406.t1;Parent=MS.gene48406.t1 |
| chr3.1 | exon | 79695672 | 79695765 | 79695672 | ID=MS.gene48406.t1.exon6;Parent=MS.gene48406.t1 |
| chr3.1 | CDS | 79695672 | 79695765 | 79695672 | ID=cds.MS.gene48406.t1;Parent=MS.gene48406.t1 |
| chr3.1 | exon | 79695533 | 79695564 | 79695533 | ID=MS.gene48406.t1.exon7;Parent=MS.gene48406.t1 |
| chr3.1 | CDS | 79695533 | 79695564 | 79695533 | ID=cds.MS.gene48406.t1;Parent=MS.gene48406.t1 |
| chr3.1 | exon | 79695053 | 79695126 | 79695053 | ID=MS.gene48406.t1.exon8;Parent=MS.gene48406.t1 |
| chr3.1 | CDS | 79695053 | 79695126 | 79695053 | ID=cds.MS.gene48406.t1;Parent=MS.gene48406.t1 |
| chr3.1 | exon | 79693993 | 79694055 | 79693993 | ID=MS.gene48406.t1.exon9;Parent=MS.gene48406.t1 |
| chr3.1 | CDS | 79693993 | 79694055 | 79693993 | ID=cds.MS.gene48406.t1;Parent=MS.gene48406.t1 |
| chr3.1 | exon | 79693726 | 79693873 | 79693726 | ID=MS.gene48406.t1.exon10;Parent=MS.gene48406.t1 |
| chr3.1 | CDS | 79693726 | 79693873 | 79693726 | ID=cds.MS.gene48406.t1;Parent=MS.gene48406.t1 |
| chr3.1 | exon | 79693150 | 79693569 | 79693150 | ID=MS.gene48406.t1.exon11;Parent=MS.gene48406.t1 |
| chr3.1 | CDS | 79693150 | 79693569 | 79693150 | ID=cds.MS.gene48406.t1;Parent=MS.gene48406.t1 |
| chr3.1 | exon | 79692874 | 79692975 | 79692874 | ID=MS.gene48406.t1.exon12;Parent=MS.gene48406.t1 |
| chr3.1 | CDS | 79692874 | 79692975 | 79692874 | ID=cds.MS.gene48406.t1;Parent=MS.gene48406.t1 |
| Gene Sequence |
| Protein sequence |
