Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49565.t1 | AES96563.1 | 77 | 165 | 34 | 1 | 1 | 161 | 1 | 165 | 7.50E-50 | 206.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49565.t1 | G7KB22 | 77.0 | 165 | 34 | 1 | 1 | 161 | 1 | 165 | 5.4e-50 | 206.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene49565 | 0.800268 | 1.56E-48 | -1.69E-46 |
| MS.gene049378 | MS.gene49565 | 0.801108 | 1.05E-48 | -1.69E-46 |
| MS.gene049669 | MS.gene49565 | 0.817693 | 2.89E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene49565 | 0.809347 | 1.98E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene49565 | 0.809172 | 2.16E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene49565 | 0.810814 | 9.56E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene49565 | 0.848744 | 5.04E-60 | -1.69E-46 |
| MS.gene050605 | MS.gene49565 | 0.801453 | 8.94E-49 | -1.69E-46 |
| MS.gene050680 | MS.gene49565 | 0.831399 | 1.71E-55 | -1.69E-46 |
| MS.gene050750 | MS.gene49565 | 0.843785 | 1.13E-58 | -1.69E-46 |
| MS.gene050953 | MS.gene49565 | 0.832426 | 9.52E-56 | -1.69E-46 |
| MS.gene051198 | MS.gene49565 | 0.816419 | 5.58E-52 | -1.69E-46 |
| MS.gene051368 | MS.gene49565 | 0.809969 | 1.45E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene49565 | 0.801809 | 7.56E-49 | -1.69E-46 |
| MS.gene052867 | MS.gene49565 | 0.817264 | 3.61E-52 | -1.69E-46 |
| MS.gene053166 | MS.gene49565 | 0.832534 | 8.95E-56 | -1.69E-46 |
| MS.gene053584 | MS.gene49565 | 0.811966 | 5.37E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene49565 | 0.810895 | 9.18E-51 | -1.69E-46 |
| MS.gene054236 | MS.gene49565 | 0.805812 | 1.11E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene49565 | -0.810833 | 9.47E-51 | -1.69E-46 |
| MS.gene054405 | MS.gene49565 | 0.828228 | 1.01E-54 | -1.69E-46 |
| MS.gene054468 | MS.gene49565 | 0.805253 | 1.46E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene49565 | 0.802224 | 6.21E-49 | -1.69E-46 |
| MS.gene05510 | MS.gene49565 | 0.824818 | 6.57E-54 | -1.69E-46 |
| MS.gene055701 | MS.gene49565 | 0.873943 | 9.94E-68 | -1.69E-46 |
| MS.gene056506 | MS.gene49565 | 0.831746 | 1.40E-55 | -1.69E-46 |
| MS.gene057026 | MS.gene49565 | 0.822468 | 2.33E-53 | -1.69E-46 |
| MS.gene05761 | MS.gene49565 | 0.802052 | 6.74E-49 | -1.69E-46 |
| MS.gene059128 | MS.gene49565 | 0.804742 | 1.87E-49 | -1.69E-46 |
| MS.gene059161 | MS.gene49565 | 0.853189 | 2.82E-61 | -1.69E-46 |
| MS.gene059162 | MS.gene49565 | 0.809852 | 1.54E-50 | -1.69E-46 |
| MS.gene059609 | MS.gene49565 | 0.815635 | 8.36E-52 | -1.69E-46 |
| MS.gene060011 | MS.gene49565 | 0.837649 | 4.59E-57 | -1.69E-46 |
| MS.gene060137 | MS.gene49565 | -0.807157 | 5.80E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene49565 | 0.824857 | 6.43E-54 | -1.69E-46 |
| MS.gene060683 | MS.gene49565 | 0.801029 | 1.09E-48 | -1.69E-46 |
| MS.gene060685 | MS.gene49565 | 0.800468 | 1.42E-48 | -1.69E-46 |
| MS.gene060802 | MS.gene49565 | 0.854095 | 1.55E-61 | -1.69E-46 |
| MS.gene061114 | MS.gene49565 | -0.804747 | 1.86E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49565.t1 | MTR_5g038590 | 89.091 | 165 | 14 | 1 | 1 | 161 | 1 | 165 | 3.47e-97 | 279 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 46 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGACCAACTCGAAAATTT+TGG | 0.194813 | 5.1:-29266472 | None:intergenic |
| TTCGAGTTGGTCATCGTAAA+TGG | 0.222053 | 5.1:+29266480 | MS.gene49565:CDS |
| TTGAAAGGATCGATCAATTC+TGG | 0.265574 | 5.1:+29267410 | MS.gene49565:CDS |
| CTCAGCCTGATCCGCGGACT+TGG | 0.266993 | 5.1:-29267127 | None:intergenic |
| GATACTCCGACACAGGTTTC+TGG | 0.268027 | 5.1:+29267989 | MS.gene49565:intron |
| GAATCGGCATCTTCACCTTT+AGG | 0.294816 | 5.1:-29267440 | None:intergenic |
| ATCGCCCAAGTCCGCGGATC+AGG | 0.395071 | 5.1:+29267122 | MS.gene49565:CDS |
| TGCTGATTCCGCTGATGCTC+AGG | 0.426663 | 5.1:+29271528 | MS.gene49565:CDS |
| TTGGTCATCGTAAATGGAAT+AGG | 0.450217 | 5.1:+29266486 | MS.gene49565:CDS |
| TCGCTGCAGTTGCTGTTGAA+TGG | 0.459794 | 5.1:+29267099 | MS.gene49565:intron |
| TGCTGATTCCACTGATGCTC+AGG | 0.460947 | 5.1:+29267167 | MS.gene49565:CDS |
| GTCGCCATCCTTTACTGTTA+CGG | 0.466106 | 5.1:+29266587 | MS.gene49565:CDS |
| AAGCTCAATACACGGCTAGA+TGG | 0.469337 | 5.1:+29272349 | MS.gene49565:intron |
| CAAGTCCGCGGATCAGGCTG+AGG | 0.469669 | 5.1:+29267128 | MS.gene49565:CDS |
| TCTGGCATCAACTCATGTAC+AGG | 0.472467 | 5.1:-29269212 | None:intergenic |
| CAATGTTACCCGCCACCTAC+AGG | 0.475644 | 5.1:+29266619 | MS.gene49565:CDS |
| TGCCGATTCCACTGATGCTC+AGG | 0.477881 | 5.1:+29267454 | MS.gene49565:CDS |
| TGAAAGGATCGATCAATTCT+GGG | 0.483186 | 5.1:+29267411 | MS.gene49565:CDS |
| TACCTGAGCATCAGTGGAAT+CGG | 0.498451 | 5.1:-29267456 | None:intergenic |
| TCAGCCTGATCCGCGGACTT+GGG | 0.505015 | 5.1:-29267126 | None:intergenic |
| TGTCGCGCCATGACGATAAG+TGG | 0.509557 | 5.1:+29266447 | None:intergenic |
| TCGTTGTAGTTGCTGTTGAA+AGG | 0.524604 | 5.1:+29267395 | MS.gene49565:intron |
| CTGTAGGTGGCGGGTAACAT+TGG | 0.525660 | 5.1:-29266618 | None:intergenic |
| TTTGGCTCCACTTATCGTCA+TGG | 0.540653 | 5.1:-29266454 | None:intergenic |
| ATTTGTTACCTGAGCATCAG+TGG | 0.553896 | 5.1:-29267462 | None:intergenic |
| CTGGCATCAACTCATGTACA+GGG | 0.558861 | 5.1:-29269211 | None:intergenic |
| AATTCTGGGGATCAACCTAA+AGG | 0.566615 | 5.1:+29267425 | MS.gene49565:CDS |
| ATTTGTTACCTGAGCATCAG+TGG | 0.569263 | 5.1:-29267175 | None:intergenic |
| AGAATGTGCCGTAACAGTAA+AGG | 0.572863 | 5.1:-29266595 | None:intergenic |
| CACATGTACCTGTAGGTGGC+GGG | 0.575850 | 5.1:-29266627 | None:intergenic |
| ACACATGTACCTGTAGGTGG+CGG | 0.584747 | 5.1:-29266628 | None:intergenic |
| AAGTCCGCGGATCAGGCTGA+GGG | 0.588066 | 5.1:+29267129 | MS.gene49565:CDS |
| ACCACCCTCAGCCTGATCCG+CGG | 0.590499 | 5.1:-29267133 | None:intergenic |
| AGCTCGACTATGTCCTCCAC+CGG | 0.602146 | 5.1:-29271500 | None:intergenic |
| TCCGCGGATCAGGCTGAGGG+TGG | 0.606239 | 5.1:+29267132 | MS.gene49565:CDS |
| GAATGGATCGCCCAAGTCCG+CGG | 0.617287 | 5.1:+29267116 | MS.gene49565:CDS |
| AGAAGACTACGAGCCGGTGG+AGG | 0.626897 | 5.1:+29271487 | MS.gene49565:CDS |
| GTTGGTTACCTGAGCATCAG+CGG | 0.636301 | 5.1:-29271536 | None:intergenic |
| ACAATACAAATCATTCAACA+AGG | 0.652780 | 5.1:+29269177 | MS.gene49565:CDS |
| GAAAGAAGACTACGAGCCGG+TGG | 0.658227 | 5.1:+29271484 | MS.gene49565:CDS |
| AAATCCCTAAGCTCAATACA+CGG | 0.661450 | 5.1:+29272341 | MS.gene49565:intron |
| GCTGAAAGAAGACTACGAGC+CGG | 0.663813 | 5.1:+29271481 | MS.gene49565:CDS |
| TGTGCCGTAACAGTAAAGGA+TGG | 0.670732 | 5.1:-29266591 | None:intergenic |
| CATACACATGTACCTGTAGG+TGG | 0.678311 | 5.1:-29266631 | None:intergenic |
| GAAAGGATCGATCAATTCTG+GGG | 0.687692 | 5.1:+29267412 | MS.gene49565:CDS |
| CAATACAAATCATTCAACAA+GGG | 0.710541 | 5.1:+29269178 | MS.gene49565:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAAAATAAATTATACA+AGG | - | chr5.1:29271048-29271067 | None:intergenic | 10.0% |
| !!! | ATACATATTATTTTAGTAAA+AGG | - | chr5.1:29269079-29269098 | None:intergenic | 10.0% |
| !!! | CTATTTTCAAATTTTTAATA+GGG | - | chr5.1:29268871-29268890 | None:intergenic | 10.0% |
| !!! | GATTTTACTTTTTTAAATTT+GGG | + | chr5.1:29266779-29266798 | MS.gene49565:intron | 10.0% |
| !!! | TACATATTATTTTAGTAAAA+GGG | - | chr5.1:29269078-29269097 | None:intergenic | 10.0% |
| !! | AAAATGTAATGTACTAATTT+AGG | - | chr5.1:29267318-29267337 | None:intergenic | 15.0% |
| !! | ATGAATATGCAAATTATATT+TGG | + | chr5.1:29269314-29269333 | MS.gene49565:intron | 15.0% |
| !! | ATTACAATTTATAAACATGA+TGG | + | chr5.1:29267934-29267953 | MS.gene49565:intron | 15.0% |
| !! | TTACAATTTATAAACATGAT+GGG | + | chr5.1:29267935-29267954 | MS.gene49565:intron | 15.0% |
| !!! | ATTAAATCAGTATTTTCTTT+AGG | - | chr5.1:29269143-29269162 | None:intergenic | 15.0% |
| !!! | CATACAAATTATATTTTGTT+TGG | + | chr5.1:29271295-29271314 | MS.gene49565:intron | 15.0% |
| !!! | GCTATTTTCAAATTTTTAAT+AGG | - | chr5.1:29268872-29268891 | None:intergenic | 15.0% |
| !!! | GGATTTTACTTTTTTAAATT+TGG | + | chr5.1:29266778-29266797 | MS.gene49565:intron | 15.0% |
| !!! | TATTATTTTACAAGTTACTT+GGG | + | chr5.1:29267832-29267851 | MS.gene49565:intron | 15.0% |
| !!! | TCATTTTCAATAGAATATTT+AGG | + | chr5.1:29268764-29268783 | MS.gene49565:intron | 15.0% |
| !!! | TTACAGAACTTTTTTTTTTT+TGG | - | chr5.1:29272300-29272319 | None:intergenic | 15.0% |
| !!! | TTTAAACTTTGTAATTTGTA+AGG | + | chr5.1:29267704-29267723 | MS.gene49565:intron | 15.0% |
| !!! | TTTGTTATTATCAATTGAAT+GGG | - | chr5.1:29270040-29270059 | None:intergenic | 15.0% |
| !! | AAACTAAAAATCTGAATTTG+TGG | - | chr5.1:29267591-29267610 | None:intergenic | 20.0% |
| !! | AATGAAGTAAACAAAAAAGT+TGG | - | chr5.1:29271017-29271036 | None:intergenic | 20.0% |
| !! | ACAGAATTTATATTGAAAAC+AGG | - | chr5.1:29272266-29272285 | None:intergenic | 20.0% |
| !! | ACTAAAATAATATGTATGCA+CGG | + | chr5.1:29269082-29269101 | MS.gene49565:intron | 20.0% |
| !! | ATTATCTATGTTAAGATGAA+AGG | + | chr5.1:29268536-29268555 | MS.gene49565:intron | 20.0% |
| !! | ATTGAAACAAAATATACCAA+AGG | - | chr5.1:29270009-29270028 | None:intergenic | 20.0% |
| !! | CATAAACAAGAAATTATTAC+TGG | - | chr5.1:29269297-29269316 | None:intergenic | 20.0% |
| !! | CTAGTATTTAATAATGAAGA+TGG | + | chr5.1:29268115-29268134 | MS.gene49565:intron | 20.0% |
| !! | CTGAATATGCAAATTATATT+TGG | + | chr5.1:29272005-29272024 | MS.gene49565:intron | 20.0% |
| !! | GTTAGTACTTAATAATTAGT+TGG | - | chr5.1:29269673-29269692 | None:intergenic | 20.0% |
| !! | TAATACCAATAGAATAGATA+CGG | + | chr5.1:29270928-29270947 | MS.gene49565:intron | 20.0% |
| !! | TATATCAGTTAGTTATTAGT+TGG | - | chr5.1:29268391-29268410 | None:intergenic | 20.0% |
| !! | TATGCAAATTATATTTGGTT+TGG | + | chr5.1:29269319-29269338 | MS.gene49565:intron | 20.0% |
| !!! | AAAATACTGATTTAATAGTC+TGG | + | chr5.1:29269147-29269166 | MS.gene49565:intron | 20.0% |
| !!! | AATAATGAAGATGGATATTT+TGG | + | chr5.1:29268124-29268143 | MS.gene49565:intron | 20.0% |
| !!! | AATATACTGATTTTATAGTC+TGG | + | chr5.1:29271832-29271851 | MS.gene49565:intron | 20.0% |
| !!! | ACATTTTACTTCTCAATTAT+AGG | + | chr5.1:29267331-29267350 | MS.gene49565:intron | 20.0% |
| !!! | ATCACATCAATATTTTCTTT+AGG | - | chr5.1:29271136-29271155 | None:intergenic | 20.0% |
| !!! | CAAGTAACTTGTAAAATAAT+AGG | - | chr5.1:29267833-29267852 | None:intergenic | 20.0% |
| !!! | CTATTATTTTACAAGTTACT+TGG | + | chr5.1:29267831-29267850 | MS.gene49565:intron | 20.0% |
| !!! | CTTTTTTAAATTTGGGTTAT+TGG | + | chr5.1:29266786-29266805 | MS.gene49565:intron | 20.0% |
| !!! | GTGTTTTGTTAGTAAAATTT+AGG | + | chr5.1:29266757-29266776 | MS.gene49565:intron | 20.0% |
| !!! | GTTTGTTATTATCAATTGAA+TGG | - | chr5.1:29270041-29270060 | None:intergenic | 20.0% |
| ! | AAAATATTGATGTGATAGTC+CGG | + | chr5.1:29271140-29271159 | MS.gene49565:intron | 25.0% |
| ! | AAACAACAGATAATGAATGA+TGG | - | chr5.1:29269346-29269365 | None:intergenic | 25.0% |
| ! | AAATCAGTATATTCTTTACG+AGG | - | chr5.1:29271825-29271844 | None:intergenic | 25.0% |
| ! | AAGTACTATAGAATATGAAC+AGG | + | chr5.1:29269510-29269529 | MS.gene49565:intron | 25.0% |
| ! | AAGTACTTATACTATGATAC+AGG | - | chr5.1:29268565-29268584 | None:intergenic | 25.0% |
| ! | AAGTATTATAGAATGTTAGC+AGG | + | chr5.1:29268218-29268237 | MS.gene49565:intron | 25.0% |
| ! | ACAACAAAAAGTGAAAAGAT+TGG | + | chr5.1:29268042-29268061 | MS.gene49565:CDS | 25.0% |
| ! | ACAATACAAATCATTCAACA+AGG | + | chr5.1:29269177-29269196 | MS.gene49565:CDS | 25.0% |
| ! | ACATATCATAGAACATCTTT+AGG | + | chr5.1:29271175-29271194 | MS.gene49565:intron | 25.0% |
| ! | ACTTAGTTTCTGAATCATTT+GGG | - | chr5.1:29270374-29270393 | None:intergenic | 25.0% |
| ! | AGCTTTCTGATCATAAAATA+TGG | - | chr5.1:29271464-29271483 | None:intergenic | 25.0% |
| ! | AGTGATTAACTATCTAACTA+GGG | - | chr5.1:29268705-29268724 | None:intergenic | 25.0% |
| ! | ATTTGATATAACTCTGATTG+TGG | - | chr5.1:29270639-29270658 | None:intergenic | 25.0% |
| ! | CAACTGTAACTAATTGATTA+TGG | - | chr5.1:29268672-29268691 | None:intergenic | 25.0% |
| ! | CAATACAAATCATTCAACAA+GGG | + | chr5.1:29269178-29269197 | MS.gene49565:CDS | 25.0% |
| ! | CAATACAAATCATTCAAGAT+CGG | + | chr5.1:29271863-29271882 | MS.gene49565:intron | 25.0% |
| ! | CAGCAACAACAAATTATTAT+TGG | - | chr5.1:29271988-29272007 | None:intergenic | 25.0% |
| ! | CATAATCAATTAGTTACAGT+TGG | + | chr5.1:29268670-29268689 | MS.gene49565:intron | 25.0% |
| ! | CATATCATAGAACATCTTTA+GGG | + | chr5.1:29271176-29271195 | MS.gene49565:intron | 25.0% |
| ! | CTAACCAATGTTTAAAAAAC+CGG | + | chr5.1:29269753-29269772 | MS.gene49565:intron | 25.0% |
| ! | GCTTTCTGATCATAAAATAT+GGG | - | chr5.1:29271463-29271482 | None:intergenic | 25.0% |
| ! | TACAAGGTAGAAAGAATAAA+TGG | - | chr5.1:29267562-29267581 | None:intergenic | 25.0% |
| ! | TACATTCTTTAAGCTCATAA+AGG | - | chr5.1:29271361-29271380 | None:intergenic | 25.0% |
| ! | TACTTAGTTTCTGAATCATT+TGG | - | chr5.1:29270375-29270394 | None:intergenic | 25.0% |
| ! | TACTTTCTATACCAAAAGAA+AGG | + | chr5.1:29270132-29270151 | MS.gene49565:intron | 25.0% |
| ! | TAGTGATTAACTATCTAACT+AGG | - | chr5.1:29268706-29268725 | None:intergenic | 25.0% |
| ! | TATCAATTGAATGGGATAAT+AGG | - | chr5.1:29270032-29270051 | None:intergenic | 25.0% |
| ! | TCAATTTACCGAATCAATAA+TGG | - | chr5.1:29271385-29271404 | None:intergenic | 25.0% |
| ! | TGAAAATTAAAAATCATGCC+AGG | - | chr5.1:29272178-29272197 | None:intergenic | 25.0% |
| ! | TGAGTTAAATACTCAATTTG+TGG | + | chr5.1:29267045-29267064 | MS.gene49565:intron | 25.0% |
| ! | TGTAAAATAATAGGCATCTA+TGG | - | chr5.1:29267824-29267843 | None:intergenic | 25.0% |
| ! | TTACACATTGAATTACAACA+TGG | + | chr5.1:29268949-29268968 | MS.gene49565:intron | 25.0% |
| ! | TTCATCTCATTCTATGTATT+TGG | + | chr5.1:29267244-29267263 | MS.gene49565:intron | 25.0% |
| !! | AATTTATAAACATGATGGGA+AGG | + | chr5.1:29267939-29267958 | MS.gene49565:intron | 25.0% |
| !! | ATGATGGTGATTGTTAATTA+AGG | + | chr5.1:29266684-29266703 | MS.gene49565:intron | 25.0% |
| !! | ATTCATTATCTGTTGTTTGT+TGG | + | chr5.1:29269348-29269367 | MS.gene49565:intron | 25.0% |
| !! | GAATGTAACCATTATTGATT+CGG | + | chr5.1:29271374-29271393 | MS.gene49565:intron | 25.0% |
| !! | TGTGATTTGATTTAAAGGAT+TGG | - | chr5.1:29267652-29267671 | None:intergenic | 25.0% |
| !! | TTCTCTGTGATTTGATTTAA+AGG | - | chr5.1:29267657-29267676 | None:intergenic | 25.0% |
| !! | TTTGTCATCCTTTAAAAACA+TGG | + | chr5.1:29271262-29271281 | MS.gene49565:intron | 25.0% |
| !!! | ATAGAAAGTATTCCCAAAAT+CGG | - | chr5.1:29270122-29270141 | None:intergenic | 25.0% |
| !!! | CAACAATACCATGTTTTTAA+AGG | - | chr5.1:29271273-29271292 | None:intergenic | 25.0% |
| !!! | TTTTACTGCTTTATTCATTG+AGG | + | chr5.1:29267761-29267780 | MS.gene49565:intron | 25.0% |
| AAATAATATGTATGCACGGA+AGG | + | chr5.1:29269086-29269105 | MS.gene49565:intron | 30.0% | |
| AACACATAAACGACTTAGAT+AGG | - | chr5.1:29266742-29266761 | None:intergenic | 30.0% | |
| AAGACAGAAACGAGTTATTT+AGG | - | chr5.1:29267290-29267309 | None:intergenic | 30.0% | |
| AAGTTCAAAGAAATTCCACA+CGG | + | chr5.1:29270281-29270300 | MS.gene49565:intron | 30.0% | |
| AATATACATTTGCAGCCTAA+TGG | - | chr5.1:29270337-29270356 | None:intergenic | 30.0% | |
| AATTCGAGAGAAAATTGAGT+TGG | - | chr5.1:29268795-29268814 | None:intergenic | 30.0% | |
| ACTTGATGCTTGAAATAAGT+GGG | + | chr5.1:29271913-29271932 | MS.gene49565:intron | 30.0% | |
| AGTAATGAGAAAAGAAACAG+AGG | + | chr5.1:29269566-29269585 | MS.gene49565:intron | 30.0% | |
| AGTTAGTTATTAGTTGGACT+TGG | - | chr5.1:29268385-29268404 | None:intergenic | 30.0% | |
| ATCAATTAGTTACAGTTGGA+TGG | + | chr5.1:29268674-29268693 | MS.gene49565:intron | 30.0% | |
| CAAGATGGACAATTAGTTAA+AGG | - | chr5.1:29270822-29270841 | None:intergenic | 30.0% | |
| CGCATAAAAAATTTAAGTGC+TGG | + | chr5.1:29271079-29271098 | MS.gene49565:intron | 30.0% | |
| CTATGATGGTTAACTATCTA+TGG | - | chr5.1:29270870-29270889 | None:intergenic | 30.0% | |
| CTGATATAGAAGTTAGTTAG+TGG | - | chr5.1:29268359-29268378 | None:intergenic | 30.0% | |
| GAAGAAATATGTGGTTAACA+TGG | + | chr5.1:29267965-29267984 | MS.gene49565:intron | 30.0% | |
| GCATGTAAAAACGTAAACTT+GGG | + | chr5.1:29267014-29267033 | MS.gene49565:intron | 30.0% | |
| GTTCTTGTGAATTAAACAAG+AGG | - | chr5.1:29269387-29269406 | None:intergenic | 30.0% | |
| TAAACTCGAATCGTAATCAT+CGG | + | chr5.1:29266877-29266896 | MS.gene49565:intron | 30.0% | |
| TACTTAGGTAAAACTAGTTC+AGG | - | chr5.1:29266859-29266878 | None:intergenic | 30.0% | |
| TAGTTGGATTCTGTCATAAA+AGG | - | chr5.1:29269657-29269676 | None:intergenic | 30.0% | |
| TGAAATAAGTGGGAAAATAC+AGG | + | chr5.1:29271923-29271942 | MS.gene49565:intron | 30.0% | |
| TGATTCAGAAACTAAGTACA+AGG | + | chr5.1:29270377-29270396 | MS.gene49565:intron | 30.0% | |
| TGATTTAATAGTCTGGTTAC+AGG | + | chr5.1:29269154-29269173 | MS.gene49565:intron | 30.0% | |
| TGCTCAGGTAACAAATAAAA+CGG | + | chr5.1:29267182-29267201 | MS.gene49565:intron | 30.0% | |
| TGTATACGAGTTTGTGAAAT+TGG | + | chr5.1:29270712-29270731 | MS.gene49565:intron | 30.0% | |
| TGTATGTACAATACACCAAA+TGG | + | chr5.1:29269000-29269019 | MS.gene49565:intron | 30.0% | |
| TTATAATGCGATGGAATCAA+AGG | - | chr5.1:29271700-29271719 | None:intergenic | 30.0% | |
| ! | ACGAAGAATATTTTGTAGTC+TGG | + | chr5.1:29269437-29269456 | MS.gene49565:intron | 30.0% |
| ! | ACGGTTTAAACCAGTTTTTA+CGG | - | chr5.1:29269875-29269894 | None:intergenic | 30.0% |
| ! | ACTTTGTAATTTGTAAGGCT+TGG | + | chr5.1:29267709-29267728 | MS.gene49565:intron | 30.0% |
| ! | AGTACTTTTACTGAATCTAC+CGG | + | chr5.1:29268578-29268597 | MS.gene49565:intron | 30.0% |
| ! | AGTGTTATGAACCTTTCTTT+TGG | - | chr5.1:29270146-29270165 | None:intergenic | 30.0% |
| ! | ATTACGATTCGAGTTTACTT+AGG | - | chr5.1:29266874-29266893 | None:intergenic | 30.0% |
| ! | CAGCAATGAAATGTGAATTT+TGG | + | chr5.1:29270251-29270270 | MS.gene49565:intron | 30.0% |
| ! | TGATTTTATAGTCTGGTTAC+AGG | + | chr5.1:29271839-29271858 | MS.gene49565:intron | 30.0% |
| ! | TTGAAATATCAATCTAGCTC+TGG | + | chr5.1:29272216-29272235 | MS.gene49565:intron | 30.0% |
| ! | TTGCTGGTTAATTGTTAACA+GGG | + | chr5.1:29268084-29268103 | MS.gene49565:intron | 30.0% |
| ! | TTTACTGAGGTTGATTAACT+TGG | + | chr5.1:29266926-29266945 | MS.gene49565:intron | 30.0% |
| ! | TTTGCTGGTTAATTGTTAAC+AGG | + | chr5.1:29268083-29268102 | MS.gene49565:intron | 30.0% |
| !! | AAAAATTTAAGTGCTGGTCT+TGG | + | chr5.1:29271085-29271104 | MS.gene49565:intron | 30.0% |
| !! | AAAATTTAAGTGCTGGTCTT+GGG | + | chr5.1:29271086-29271105 | MS.gene49565:intron | 30.0% |
| !! | CAAGTTTAATTTGTGCATGA+TGG | + | chr5.1:29266668-29266687 | MS.gene49565:intron | 30.0% |
| !! | GATTTCAAGTTGTAAAACCT+TGG | - | chr5.1:29266833-29266852 | None:intergenic | 30.0% |
| !! | TAGAAAGTATTCCCAAAATC+GGG | - | chr5.1:29270121-29270140 | None:intergenic | 30.0% |
| !!! | CGGTTTTTTAAACATTGGTT+AGG | - | chr5.1:29269755-29269774 | None:intergenic | 30.0% |
| !!! | CTGTATTATTTTTTCGTACG+TGG | + | chr5.1:29268613-29268632 | MS.gene49565:intron | 30.0% |
| !!! | GTTTTGTTTGTACATGGAAA+AGG | + | chr5.1:29271198-29271217 | MS.gene49565:intron | 30.0% |
| !!! | TGTTCCGGTTTTTTAAACAT+TGG | - | chr5.1:29269760-29269779 | None:intergenic | 30.0% |
| !!! | TTTAGGGTTTTGTTTGTACA+TGG | + | chr5.1:29271192-29271211 | MS.gene49565:intron | 30.0% |
| AAACAGGTAGTCAGTTAAAC+CGG | + | chr5.1:29269842-29269861 | MS.gene49565:intron | 35.0% | |
| AAACATACACATGTACCTGT+AGG | - | chr5.1:29266637-29266656 | None:intergenic | 35.0% | |
| AAACGGTTTAATGCTTACAG+AGG | + | chr5.1:29267199-29267218 | MS.gene49565:intron | 35.0% | |
| AAATCCCTAAGCTCAATACA+CGG | + | chr5.1:29272341-29272360 | MS.gene49565:intron | 35.0% | |
| AACTGATATAATTGCTGCAG+TGG | + | chr5.1:29268401-29268420 | MS.gene49565:intron | 35.0% | |
| AAGAAATCACATACTGAGCT+TGG | - | chr5.1:29270501-29270520 | None:intergenic | 35.0% | |
| AAGACAATGAGAGAGAAAAC+AGG | + | chr5.1:29268260-29268279 | MS.gene49565:intron | 35.0% | |
| AATTCATAGCTGAACAAAGC+TGG | - | chr5.1:29271656-29271675 | None:intergenic | 35.0% | |
| ACTGTGCCTAGTATATTAAG+CGG | + | chr5.1:29269724-29269743 | MS.gene49565:intron | 35.0% | |
| AGAAAAAAGGGGGAAAATAC+AGG | + | chr5.1:29269232-29269251 | MS.gene49565:CDS | 35.0% | |
| AGAACGACTGAGATAGAAAA+AGG | - | chr5.1:29268506-29268525 | None:intergenic | 35.0% | |
| AGACAATGAGAGAGAAAACA+GGG | + | chr5.1:29268261-29268280 | MS.gene49565:intron | 35.0% | |
| AGACAATGCTCTAGTATGAA+AGG | + | chr5.1:29269930-29269949 | MS.gene49565:intron | 35.0% | |
| AGTTCAAAGAAATTCCACAC+GGG | + | chr5.1:29270282-29270301 | MS.gene49565:intron | 35.0% | |
| ATCAAGTCTATTCCATGTAC+AGG | - | chr5.1:29271900-29271919 | None:intergenic | 35.0% | |
| ATGCCAAAAACGTGTTAACT+TGG | - | chr5.1:29266998-29267017 | None:intergenic | 35.0% | |
| ATGTACAATACACCAAATGG+TGG | + | chr5.1:29269003-29269022 | MS.gene49565:intron | 35.0% | |
| CAATAGAATAGATACGGAGT+CGG | + | chr5.1:29270934-29270953 | MS.gene49565:intron | 35.0% | |
| CACTTTCAATTCCATTATCC+AGG | - | chr5.1:29267897-29267916 | None:intergenic | 35.0% | |
| CTATGTGGCTTATTGAGTAT+AGG | - | chr5.1:29268821-29268840 | None:intergenic | 35.0% | |
| CTCAATAAGCCACATAGATT+TGG | + | chr5.1:29268824-29268843 | MS.gene49565:intron | 35.0% | |
| CTCAGATATGGTAACTATGA+TGG | - | chr5.1:29270884-29270903 | None:intergenic | 35.0% | |
| CTGGTAAATTTAATCTCCAC+AGG | - | chr5.1:29271230-29271249 | None:intergenic | 35.0% | |
| GAATTTGTGGACAAGTTACA+AGG | - | chr5.1:29267578-29267597 | None:intergenic | 35.0% | |
| GACTTGATGCTTGAAATAAG+TGG | + | chr5.1:29271912-29271931 | MS.gene49565:intron | 35.0% | |
| GGAAGGAAAGAAGAAATATG+TGG | + | chr5.1:29267956-29267975 | MS.gene49565:intron | 35.0% | |
| GGCATGTAAAAACGTAAACT+TGG | + | chr5.1:29267013-29267032 | MS.gene49565:intron | 35.0% | |
| GGTAGAAAGAATAAATGGCA+AGG | - | chr5.1:29267557-29267576 | None:intergenic | 35.0% | |
| GTATATTCTTTACGAGGACA+AGG | - | chr5.1:29271819-29271838 | None:intergenic | 35.0% | |
| GTGGAGATTAAATTTACCAG+CGG | + | chr5.1:29271230-29271249 | MS.gene49565:intron | 35.0% | |
| GTTTGCAAGCTTAATGTCAT+GGG | - | chr5.1:29268465-29268484 | None:intergenic | 35.0% | |
| TAACATCGATGACTCAGATA+TGG | - | chr5.1:29268732-29268751 | None:intergenic | 35.0% | |
| TAACTGTATAAATGCTGCAG+TGG | + | chr5.1:29269689-29269708 | MS.gene49565:intron | 35.0% | |
| TACCTACTTCCAAATCTATG+TGG | - | chr5.1:29268836-29268855 | None:intergenic | 35.0% | |
| TACGAGTTTGTGAAATTGGT+AGG | + | chr5.1:29270716-29270735 | MS.gene49565:intron | 35.0% | |
| TCAAGTCTATTCCATGTACA+GGG | - | chr5.1:29271899-29271918 | None:intergenic | 35.0% | |
| TCATCTTCATTGTATGCCTT+TGG | + | chr5.1:29269990-29270009 | MS.gene49565:intron | 35.0% | |
| TCTGTCATAAAAGGTAGTAC+TGG | - | chr5.1:29269648-29269667 | None:intergenic | 35.0% | |
| TGAAAGGATCGATCAATTCT+GGG | + | chr5.1:29267411-29267430 | MS.gene49565:CDS | 35.0% | |
| TGATTCTAAACTCTTGACCA+AGG | + | chr5.1:29266813-29266832 | MS.gene49565:intron | 35.0% | |
| TGGACGTCAGTTATACAAAA+AGG | - | chr5.1:29267632-29267651 | None:intergenic | 35.0% | |
| TGTACAATACACCAAATGGT+GGG | + | chr5.1:29269004-29269023 | MS.gene49565:intron | 35.0% | |
| TGTATTGAGCTTAGGGATTT+GGG | - | chr5.1:29272341-29272360 | None:intergenic | 35.0% | |
| TGTGAGTAAGAAGAAGAGAA+TGG | - | chr5.1:29270181-29270200 | None:intergenic | 35.0% | |
| TGTTTGCAAGCTTAATGTCA+TGG | - | chr5.1:29268466-29268485 | None:intergenic | 35.0% | |
| TTCTCTTCTTCTTACTCACA+TGG | + | chr5.1:29270181-29270200 | MS.gene49565:intron | 35.0% | |
| TTGAAAGGATCGATCAATTC+TGG | + | chr5.1:29267410-29267429 | MS.gene49565:CDS | 35.0% | |
| TTGACACTTAATCAACCAGT+TGG | - | chr5.1:29271557-29271576 | None:intergenic | 35.0% | |
| TTGGTCATCGTAAATGGAAT+AGG | + | chr5.1:29266486-29266505 | MS.gene49565:CDS | 35.0% | |
| TTTAAAAAACCGGAACAGAC+CGG | + | chr5.1:29269763-29269782 | MS.gene49565:intron | 35.0% | |
| ! | CGGTTTAAACCAGTTTTTAC+GGG | - | chr5.1:29269874-29269893 | None:intergenic | 35.0% |
| ! | GATGACCAACTCGAAAATTT+TGG | - | chr5.1:29266475-29266494 | None:intergenic | 35.0% |
| ! | TATCTGTTGCTTCTTGTTGT+GGG | + | chr5.1:29272052-29272071 | MS.gene49565:intron | 35.0% |
| ! | TATCTGTTGTTTGTTGGTGT+GGG | + | chr5.1:29269354-29269373 | MS.gene49565:intron | 35.0% |
| ! | TGTATTTTCCCCCTTTTTTC+TGG | - | chr5.1:29269233-29269252 | None:intergenic | 35.0% |
| ! | TGTTAACTTGGAGGTAAACT+TGG | - | chr5.1:29266986-29267005 | None:intergenic | 35.0% |
| ! | TTATCTGTTGTTTGTTGGTG+TGG | + | chr5.1:29269353-29269372 | MS.gene49565:intron | 35.0% |
| !! | AACTTGGTTTGTGGTGAAAT+CGG | - | chr5.1:29266970-29266989 | None:intergenic | 35.0% |
| !! | ATGAGTTGATGCCAGAAAAA+AGG | + | chr5.1:29269219-29269238 | MS.gene49565:CDS | 35.0% |
| !! | ATTTTAGTAAAAGGGCAACC+CGG | - | chr5.1:29269070-29269089 | None:intergenic | 35.0% |
| !! | GGAAGGTTTTGGTATGAAAA+TGG | + | chr5.1:29269103-29269122 | MS.gene49565:intron | 35.0% |
| !! | TGAGTTGATGCCAGAAAAAA+GGG | + | chr5.1:29269220-29269239 | MS.gene49565:CDS | 35.0% |
| !!! | TCATTCCTTTTTTGGTGTGT+TGG | + | chr5.1:29271322-29271341 | MS.gene49565:intron | 35.0% |
| !!! | TTGGACGATCATTCCTTTTT+TGG | + | chr5.1:29271314-29271333 | MS.gene49565:intron | 35.0% |
| AAACTCGTACGAGTTTACTG+AGG | + | chr5.1:29266913-29266932 | MS.gene49565:intron | 40.0% | |
| AACAGACCGGATTGTTTAAC+CGG | + | chr5.1:29269776-29269795 | MS.gene49565:intron | 40.0% | |
| AAGATGATACCTTGCACACA+AGG | - | chr5.1:29269977-29269996 | None:intergenic | 40.0% | |
| AATCAAAGGCTTGCACAATG+AGG | - | chr5.1:29271686-29271705 | None:intergenic | 40.0% | |
| AGAAGAGAATGGATGTGCAT+TGG | - | chr5.1:29270170-29270189 | None:intergenic | 40.0% | |
| AGAATGTGCCGTAACAGTAA+AGG | - | chr5.1:29266598-29266617 | None:intergenic | 40.0% | |
| AGCCACATAGATTTGGAAGT+AGG | + | chr5.1:29268831-29268850 | MS.gene49565:intron | 40.0% | |
| AGTCACCAGATATGAGCTTT+GGG | + | chr5.1:29270534-29270553 | MS.gene49565:intron | 40.0% | |
| ATAAACCACCAAGCAAACCT+TGG | + | chr5.1:29270210-29270229 | MS.gene49565:intron | 40.0% | |
| ATGAAAGGAGAATGCTCCTT+TGG | + | chr5.1:29269945-29269964 | MS.gene49565:intron | 40.0% | |
| CAAGATCTTCAAGCACATCA+AGG | - | chr5.1:29272085-29272104 | None:intergenic | 40.0% | |
| CAATAGTGACGACTCAGATA+TGG | - | chr5.1:29270896-29270915 | None:intergenic | 40.0% | |
| CAATTATTCTGCTACTGCCT+TGG | + | chr5.1:29270468-29270487 | MS.gene49565:intron | 40.0% | |
| CCTAATGGTACCTGTTTAGA+GGG | - | chr5.1:29270322-29270341 | None:intergenic | 40.0% | |
| CGACTCCGTATCTATTCTAT+TGG | - | chr5.1:29270936-29270955 | None:intergenic | 40.0% | |
| CTGTGCCTAGTATATTAAGC+GGG | + | chr5.1:29269725-29269744 | MS.gene49565:intron | 40.0% | |
| CTTGATGTGCTTGAAGATCT+TGG | + | chr5.1:29272083-29272102 | MS.gene49565:intron | 40.0% | |
| GAAAGGATCGATCAATTCTG+GGG | + | chr5.1:29267412-29267431 | MS.gene49565:CDS | 40.0% | |
| GACAATGAGAGAGAAAACAG+GGG | + | chr5.1:29268262-29268281 | MS.gene49565:intron | 40.0% | |
| GAGTACCCGCTTAATATACT+AGG | - | chr5.1:29269733-29269752 | None:intergenic | 40.0% | |
| GATATGTATCGTCCTGTATC+CGG | - | chr5.1:29271162-29271181 | None:intergenic | 40.0% | |
| GTGTATTGAGCTTAGGGATT+TGG | - | chr5.1:29272342-29272361 | None:intergenic | 40.0% | |
| GTTATTAAGCACCCTGTACA+TGG | + | chr5.1:29271885-29271904 | MS.gene49565:intron | 40.0% | |
| TAAACCCTGTCAGGTTAGTA+CGG | - | chr5.1:29269904-29269923 | None:intergenic | 40.0% | |
| TAGCTGAACAAAGCTGGATT+TGG | - | chr5.1:29271650-29271669 | None:intergenic | 40.0% | |
| TCAATTCCATTATCCAGGAC+AGG | - | chr5.1:29267892-29267911 | None:intergenic | 40.0% | |
| TCCTCCATAAAATCAGAAGC+TGG | + | chr5.1:29270976-29270995 | MS.gene49565:intron | 40.0% | |
| TGAAAGGAGAATGCTCCTTT+GGG | + | chr5.1:29269946-29269965 | MS.gene49565:intron | 40.0% | |
| TGTGCAGTGTTATAATGCGA+TGG | - | chr5.1:29271709-29271728 | None:intergenic | 40.0% | |
| TGTGGCTTATTGAGTATAGG+AGG | - | chr5.1:29268818-29268837 | None:intergenic | 40.0% | |
| TTAAACAATCCGGTCTGTTC+CGG | - | chr5.1:29269775-29269794 | None:intergenic | 40.0% | |
| ! | AATTCTGGGGATCAACCTAA+AGG | + | chr5.1:29267425-29267444 | MS.gene49565:CDS | 40.0% |
| ! | ACCTGTTTTGTACAGATGTC+CGG | - | chr5.1:29269830-29269849 | None:intergenic | 40.0% |
| ! | AGTTGATGCCAGAAAAAAGG+GGG | + | chr5.1:29269222-29269241 | MS.gene49565:CDS | 40.0% |
| ! | ATCCATTTCAGCCCGATTTT+GGG | + | chr5.1:29270107-29270126 | MS.gene49565:intron | 40.0% |
| ! | ATTTGTTACCTGAGCATCAG+TGG | - | chr5.1:29267178-29267197 | None:intergenic | 40.0% |
| ! | CATGCCAGCTTCTGATTTTA+TGG | - | chr5.1:29270983-29271002 | None:intergenic | 40.0% |
| ! | CCAAAAACGTGTTAACTTGG+AGG | - | chr5.1:29266995-29267014 | None:intergenic | 40.0% |
| ! | CCTCCAAGTTAACACGTTTT+TGG | + | chr5.1:29266992-29267011 | MS.gene49565:intron | 40.0% |
| ! | CTATCTGTTGCTTCTTGTTG+TGG | + | chr5.1:29272051-29272070 | MS.gene49565:intron | 40.0% |
| ! | GGTTTGCTTGGTGGTTTATT+AGG | - | chr5.1:29270209-29270228 | None:intergenic | 40.0% |
| ! | TATCCATTTCAGCCCGATTT+TGG | + | chr5.1:29270106-29270125 | MS.gene49565:intron | 40.0% |
| ! | TATGTATGCACGGAAGGTTT+TGG | + | chr5.1:29269092-29269111 | MS.gene49565:intron | 40.0% |
| ! | TCGTTGTAGTTGCTGTTGAA+AGG | + | chr5.1:29267395-29267414 | MS.gene49565:intron | 40.0% |
| ! | TTGCATGATAGTTTGTAGCC+TGG | + | chr5.1:29272157-29272176 | MS.gene49565:intron | 40.0% |
| ! | TTGGAGGTAAACTTGGTTTG+TGG | - | chr5.1:29266979-29266998 | None:intergenic | 40.0% |
| !! | CAGTTTTTACGGGCTTTTTC+CGG | - | chr5.1:29269864-29269883 | None:intergenic | 40.0% |
| !! | GAGTTGATGCCAGAAAAAAG+GGG | + | chr5.1:29269221-29269240 | MS.gene49565:CDS | 40.0% |
| !! | GTTTTGTTGCATGCATTTGC+TGG | + | chr5.1:29268068-29268087 | MS.gene49565:intron | 40.0% |
| !! | TTCGAGTTGGTCATCGTAAA+TGG | + | chr5.1:29266480-29266499 | MS.gene49565:CDS | 40.0% |
| !!! | CTTTTTTGGTGTGTTGGTGA+GGG | + | chr5.1:29271328-29271347 | MS.gene49565:intron | 40.0% |
| !!! | TGGAGCCAAAATTTTCGAGT+TGG | + | chr5.1:29266467-29266486 | MS.gene49565:CDS | 40.0% |
| AAATCTCCTCCCGCAAATGT+AGG | + | chr5.1:29267481-29267500 | MS.gene49565:intron | 45.0% | |
| AAGCTCAATACACGGCTAGA+TGG | + | chr5.1:29272349-29272368 | MS.gene49565:intron | 45.0% | |
| AATACAGAGTAGTCCTGTGC+CGG | - | chr5.1:29268600-29268619 | None:intergenic | 45.0% | |
| AATCTCCTCCCGCAAATGTA+GGG | + | chr5.1:29267482-29267501 | MS.gene49565:intron | 45.0% | |
| ACAACGAAGTCCTGTGTAAG+TGG | - | chr5.1:29270582-29270601 | None:intergenic | 45.0% | |
| AGGAAGGGATCATCGTGAAT+CGG | - | chr5.1:29270767-29270786 | None:intergenic | 45.0% | |
| AGTCAGTCAAGATCCTACAC+AGG | - | chr5.1:29270793-29270812 | None:intergenic | 45.0% | |
| ATCCTACACAGGATCAGGAA+GGG | - | chr5.1:29270782-29270801 | None:intergenic | 45.0% | |
| ATTGAACTGTGTTCCTGTCC+TGG | + | chr5.1:29267876-29267895 | MS.gene49565:intron | 45.0% | |
| ATTGACACCCCTACATTTGC+GGG | - | chr5.1:29267493-29267512 | None:intergenic | 45.0% | |
| CAACGAAGTCCTGTGTAAGT+GGG | - | chr5.1:29270581-29270600 | None:intergenic | 45.0% | |
| CAAGGAATAGAGAAAGCAGC+TGG | - | chr5.1:29267539-29267558 | None:intergenic | 45.0% | |
| CAGCTGTGACTAACTCAAGA+TGG | - | chr5.1:29270837-29270856 | None:intergenic | 45.0% | |
| CAGTCACCAGATATGAGCTT+TGG | + | chr5.1:29270533-29270552 | MS.gene49565:intron | 45.0% | |
| CATACACATGTACCTGTAGG+TGG | - | chr5.1:29266634-29266653 | None:intergenic | 45.0% | |
| CATCTTGAGTTAGTCACAGC+TGG | + | chr5.1:29270835-29270854 | MS.gene49565:intron | 45.0% | |
| CATTGACACCCCTACATTTG+CGG | - | chr5.1:29267494-29267513 | None:intergenic | 45.0% | |
| CCCTCTAAACAGGTACCATT+AGG | + | chr5.1:29270319-29270338 | MS.gene49565:intron | 45.0% | |
| CCTCACCAACACACCAAAAA+AGG | - | chr5.1:29271330-29271349 | None:intergenic | 45.0% | |
| CGATACCTAAAGGAACGATG+CGG | - | chr5.1:29266568-29266587 | None:intergenic | 45.0% | |
| CGGAAAAAGCCCGTAAAAAC+TGG | + | chr5.1:29269862-29269881 | MS.gene49565:intron | 45.0% | |
| CTAGCCGTGTATTGAGCTTA+GGG | - | chr5.1:29272348-29272367 | None:intergenic | 45.0% | |
| CTGAGCTTGGAAGTTAACCA+AGG | - | chr5.1:29270488-29270507 | None:intergenic | 45.0% | |
| CTGGCATCAACTCATGTACA+GGG | - | chr5.1:29269214-29269233 | None:intergenic | 45.0% | |
| CTGTCAGGTTAGTACGGTTT+CGG | - | chr5.1:29269898-29269917 | None:intergenic | 45.0% | |
| CTTACTGAACCCACTTACAC+AGG | + | chr5.1:29270569-29270588 | MS.gene49565:intron | 45.0% | |
| GAAACCGTACTAACCTGACA+GGG | + | chr5.1:29269897-29269916 | MS.gene49565:intron | 45.0% | |
| GAATCGGCATCTTCACCTTT+AGG | - | chr5.1:29267443-29267462 | None:intergenic | 45.0% | |
| GCCTAATGGTACCTGTTTAG+AGG | - | chr5.1:29270323-29270342 | None:intergenic | 45.0% | |
| GTCACCAGATATGAGCTTTG+GGG | + | chr5.1:29270535-29270554 | MS.gene49565:intron | 45.0% | |
| GTCGCCATCCTTTACTGTTA+CGG | + | chr5.1:29266587-29266606 | MS.gene49565:CDS | 45.0% | |
| TACCTGAGCATCAGTGGAAT+CGG | - | chr5.1:29267172-29267191 | None:intergenic | 45.0% | |
| TCAAGATCCTACACAGGATC+AGG | - | chr5.1:29270787-29270806 | None:intergenic | 45.0% | |
| TCATTGCTGCAAGCCATGTA+GGG | - | chr5.1:29270240-29270259 | None:intergenic | 45.0% | |
| TCCGGACATCTGTACAAAAC+AGG | + | chr5.1:29269826-29269845 | MS.gene49565:intron | 45.0% | |
| TCTAGCCGTGTATTGAGCTT+AGG | - | chr5.1:29272349-29272368 | None:intergenic | 45.0% | |
| TCTAGTCACTAAACCCTGTC+AGG | - | chr5.1:29269913-29269932 | None:intergenic | 45.0% | |
| TCTGGCATCAACTCATGTAC+AGG | - | chr5.1:29269215-29269234 | None:intergenic | 45.0% | |
| TGAACTCCAGAAACCTGTGT+CGG | - | chr5.1:29267998-29268017 | None:intergenic | 45.0% | |
| TGACAAACAACAAAAGCCGC+TGG | - | chr5.1:29271249-29271268 | None:intergenic | 45.0% | |
| TGATGTGATAGTCCGGATAC+AGG | + | chr5.1:29271147-29271166 | MS.gene49565:intron | 45.0% | |
| TGATTCCGCATCGTTCCTTT+AGG | + | chr5.1:29266560-29266579 | MS.gene49565:intron | 45.0% | |
| TGTGCCGTAACAGTAAAGGA+TGG | - | chr5.1:29266594-29266613 | None:intergenic | 45.0% | |
| TGTGTTCCTGTCCTGGATAA+TGG | + | chr5.1:29267883-29267902 | MS.gene49565:intron | 45.0% | |
| TTCATTGCTGCAAGCCATGT+AGG | - | chr5.1:29270241-29270260 | None:intergenic | 45.0% | |
| TTCCCAAAATCGGGCTGAAA+TGG | - | chr5.1:29270112-29270131 | None:intergenic | 45.0% | |
| TTGAGTTAGTCACAGCTGGA+TGG | + | chr5.1:29270839-29270858 | MS.gene49565:intron | 45.0% | |
| TTTACTGAATCTACCGGCAC+AGG | + | chr5.1:29268584-29268603 | MS.gene49565:intron | 45.0% | |
| TTTAGAGGGAGAGAGAGACA+AGG | - | chr5.1:29270308-29270327 | None:intergenic | 45.0% | |
| ! | ATGGAAAAGGCTCTAACCTG+TGG | + | chr5.1:29271211-29271230 | MS.gene49565:intron | 45.0% |
| ! | GCCAGCTTCTGATTTTATGG+AGG | - | chr5.1:29270980-29270999 | None:intergenic | 45.0% |
| ! | TCACCAGATATGAGCTTTGG+GGG | + | chr5.1:29270536-29270555 | MS.gene49565:intron | 45.0% |
| ! | TTTTGTACAGATGTCCGGAC+CGG | - | chr5.1:29269825-29269844 | None:intergenic | 45.0% |
| !! | ATGAGCTTTGGGGGAGTATT+AGG | + | chr5.1:29270545-29270564 | MS.gene49565:intron | 45.0% |
| !! | TGAGCTTTGGGGGAGTATTA+GGG | + | chr5.1:29270546-29270565 | MS.gene49565:intron | 45.0% |
| !! | TGCTGGTCTTGGGATGAAAA+TGG | + | chr5.1:29271096-29271115 | MS.gene49565:intron | 45.0% |
| !!! | CCTTTTTTGGTGTGTTGGTG+AGG | + | chr5.1:29271327-29271346 | MS.gene49565:intron | 45.0% |
| !!! | TAATACTTTTTTTTTTTTAA+TGG | + | chr5.1:29271757-29271776 | MS.gene49565:intron | 5.0% |
| AAACCTTGGCCAACCCTACA+TGG | + | chr5.1:29270224-29270243 | MS.gene49565:intron | 50.0% | |
| AAGGGATCATCGTGAATCGG+GGG | - | chr5.1:29270764-29270783 | None:intergenic | 50.0% | |
| ACACATGTACCTGTAGGTGG+CGG | - | chr5.1:29266631-29266650 | None:intergenic | 50.0% | |
| ACATGGTGATACTCCGACAC+AGG | + | chr5.1:29267982-29268001 | MS.gene49565:intron | 50.0% | |
| ACTCCCCCAAAGCTCATATC+TGG | - | chr5.1:29270542-29270561 | None:intergenic | 50.0% | |
| AGGATGGCGACGATACCTAA+AGG | - | chr5.1:29266578-29266597 | None:intergenic | 50.0% | |
| ATCCCTTCCTGATCCTGTGT+AGG | + | chr5.1:29270777-29270796 | MS.gene49565:intron | 50.0% | |
| ATCTCCTCCCGCAAATGTAG+GGG | + | chr5.1:29267483-29267502 | MS.gene49565:intron | 50.0% | |
| CAGGTTAGTACGGTTTCGGA+CGG | - | chr5.1:29269894-29269913 | None:intergenic | 50.0% | |
| CCCATCCACCACAAAATGCA+GGG | + | chr5.1:29271581-29271600 | MS.gene49565:intron | 50.0% | |
| CGAAACCGTACTAACCTGAC+AGG | + | chr5.1:29269896-29269915 | MS.gene49565:intron | 50.0% | |
| CTGATGCTCAGGTAACCAAC+TGG | + | chr5.1:29271539-29271558 | MS.gene49565:intron | 50.0% | |
| GAAGGGATCATCGTGAATCG+GGG | - | chr5.1:29270765-29270784 | None:intergenic | 50.0% | |
| GATACTCCGACACAGGTTTC+TGG | + | chr5.1:29267989-29268008 | MS.gene49565:intron | 50.0% | |
| GATCCTACACAGGATCAGGA+AGG | - | chr5.1:29270783-29270802 | None:intergenic | 50.0% | |
| GCACACAAGGCTAAACCCAA+AGG | - | chr5.1:29269964-29269983 | None:intergenic | 50.0% | |
| GCTGAAAGAAGACTACGAGC+CGG | + | chr5.1:29271481-29271500 | MS.gene49565:CDS | 50.0% | |
| GGAAGGGATCATCGTGAATC+GGG | - | chr5.1:29270766-29270785 | None:intergenic | 50.0% | |
| GTCTCTCTCTCCCTCTAAAC+AGG | + | chr5.1:29270309-29270328 | MS.gene49565:intron | 50.0% | |
| GTTGGTTACCTGAGCATCAG+CGG | - | chr5.1:29271539-29271558 | None:intergenic | 50.0% | |
| ! | CGTGACATCCCTGCATTTTG+TGG | - | chr5.1:29271592-29271611 | None:intergenic | 50.0% |
| ! | GACATCCCTGCATTTTGTGG+TGG | - | chr5.1:29271589-29271608 | None:intergenic | 50.0% |
| ! | TCGCTGCAGTTGCTGTTGAA+TGG | + | chr5.1:29267099-29267118 | MS.gene49565:intron | 50.0% |
| !! | TCCCTGCATTTTGTGGTGGA+TGG | - | chr5.1:29271585-29271604 | None:intergenic | 50.0% |
| !! | TGCTGATTCCACTGATGCTC+AGG | + | chr5.1:29267167-29267186 | MS.gene49565:CDS | 50.0% |
| !! | TGGGTTTAGCCTTGTGTGCA+AGG | + | chr5.1:29269965-29269984 | MS.gene49565:intron | 50.0% |
| !!! | CCCTGCATTTTGTGGTGGAT+GGG | - | chr5.1:29271584-29271603 | None:intergenic | 50.0% |
| !!! | CCTGCATTTTGTGGTGGATG+GGG | - | chr5.1:29271583-29271602 | None:intergenic | 50.0% |
| !!! | CTGCATTTTGTGGTGGATGG+GGG | - | chr5.1:29271582-29271601 | None:intergenic | 50.0% |
| !!! | TGCATTTTGTGGTGGATGGG+GGG | - | chr5.1:29271581-29271600 | None:intergenic | 50.0% |
| ACTAAAGCTCCCGCATACGC+AGG | - | chr5.1:29269044-29269063 | None:intergenic | 55.0% | |
| AGCTCGACTATGTCCTCCAC+CGG | - | chr5.1:29271503-29271522 | None:intergenic | 55.0% | |
| CAATGTTACCCGCCACCTAC+AGG | + | chr5.1:29266619-29266638 | MS.gene49565:CDS | 55.0% | |
| CACATGTACCTGTAGGTGGC+GGG | - | chr5.1:29266630-29266649 | None:intergenic | 55.0% | |
| CCCCATCCACCACAAAATGC+AGG | + | chr5.1:29271580-29271599 | MS.gene49565:intron | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | - | chr5.1:29269043-29269062 | None:intergenic | 55.0% | |
| GAAAGAAGACTACGAGCCGG+TGG | + | chr5.1:29271484-29271503 | MS.gene49565:CDS | 55.0% | |
| GACCGGATTGTTTAACCGGC+TGG | + | chr5.1:29269780-29269799 | MS.gene49565:intron | 55.0% | |
| GCAGGGATGTCACGATCTGT+TGG | + | chr5.1:29271598-29271617 | MS.gene49565:intron | 55.0% | |
| GGATTGTTTAACCGGCTGGC+CGG | + | chr5.1:29269784-29269803 | MS.gene49565:intron | 55.0% | |
| GGCCAGCCGGTTAAACAATC+CGG | - | chr5.1:29269785-29269804 | None:intergenic | 55.0% | |
| TGCTGCAAGCCATGTAGGGT+TGG | - | chr5.1:29270236-29270255 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr5.1:29269048-29269067 | MS.gene49565:intron | 55.0% |
| ! | GTTGGCCAAGGTTTGCTTGG+TGG | - | chr5.1:29270218-29270237 | None:intergenic | 55.0% |
| !! | AAGCCATGTAGGGTTGGCCA+AGG | - | chr5.1:29270230-29270249 | None:intergenic | 55.0% |
| !! | AGGGTTGGCCAAGGTTTGCT+TGG | - | chr5.1:29270221-29270240 | None:intergenic | 55.0% |
| !! | CTGTAGGTGGCGGGTAACAT+TGG | - | chr5.1:29266621-29266640 | None:intergenic | 55.0% |
| !! | TGCCGATTCCACTGATGCTC+AGG | + | chr5.1:29267454-29267473 | MS.gene49565:CDS | 55.0% |
| !! | TGCTGATTCCGCTGATGCTC+AGG | + | chr5.1:29271528-29271547 | MS.gene49565:CDS | 55.0% |
| !!! | GCATTTTGTGGTGGATGGGG+GGG | - | chr5.1:29271580-29271599 | None:intergenic | 55.0% |
| AAGTCCGCGGATCAGGCTGA+GGG | + | chr5.1:29267129-29267148 | MS.gene49565:CDS | 60.0% | |
| AGAAGACTACGAGCCGGTGG+AGG | + | chr5.1:29271487-29271506 | MS.gene49565:CDS | 60.0% | |
| AGAGAGAGACAAGGCCCGTG+TGG | - | chr5.1:29270299-29270318 | None:intergenic | 60.0% | |
| CCGGAAACAGCCCGGATTAC+CGG | - | chr5.1:29269806-29269825 | None:intergenic | 60.0% | |
| GAATGGATCGCCCAAGTCCG+CGG | + | chr5.1:29267116-29267135 | MS.gene49565:CDS | 60.0% | |
| GACACCCCTACATTTGCGGG+AGG | - | chr5.1:29267490-29267509 | None:intergenic | 60.0% | |
| TCAGCCTGATCCGCGGACTT+GGG | - | chr5.1:29267129-29267148 | None:intergenic | 60.0% | |
| ! | AATCCGGGCTGTTTCCGGTC+CGG | + | chr5.1:29269808-29269827 | MS.gene49565:intron | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr5.1:29269016-29269035 | MS.gene49565:intron | 60.0% |
| ! | CCGGTAATCCGGGCTGTTTC+CGG | + | chr5.1:29269803-29269822 | MS.gene49565:intron | 60.0% |
| ! | TAACCGGCTGGCCGGTAATC+CGG | + | chr5.1:29269792-29269811 | MS.gene49565:intron | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr5.1:29269049-29269068 | MS.gene49565:intron | 60.0% |
| ACCACCCTCAGCCTGATCCG+CGG | - | chr5.1:29267136-29267155 | None:intergenic | 65.0% | |
| ATCGCCCAAGTCCGCGGATC+AGG | + | chr5.1:29267122-29267141 | MS.gene49565:CDS | 65.0% | |
| CAAGTCCGCGGATCAGGCTG+AGG | + | chr5.1:29267128-29267147 | MS.gene49565:CDS | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr5.1:29269031-29269050 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr5.1:29269018-29269037 | None:intergenic | 65.0% | |
| CTCAGCCTGATCCGCGGACT+TGG | - | chr5.1:29267130-29267149 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr5.1:29269031-29269050 | MS.gene49565:intron | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr5.1:29269032-29269051 | None:intergenic | 65.0% | |
| TGTCCGGACCGGAAACAGCC+CGG | - | chr5.1:29269814-29269833 | None:intergenic | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr5.1:29269032-29269051 | MS.gene49565:intron | 65.0% | |
| ! | AACCGGCTGGCCGGTAATCC+GGG | + | chr5.1:29269793-29269812 | MS.gene49565:intron | 65.0% |
| AGCCCGGATTACCGGCCAGC+CGG | - | chr5.1:29269798-29269817 | None:intergenic | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr5.1:29269033-29269052 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr5.1:29269037-29269056 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr5.1:29269038-29269057 | None:intergenic | 70.0% | |
| TCCGCGGATCAGGCTGAGGG+TGG | + | chr5.1:29267132-29267151 | MS.gene49565:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 29266456 | 29272375 | 29266456 | ID=MS.gene49565 |
| chr5.1 | mRNA | 29266456 | 29272375 | 29266456 | ID=MS.gene49565.t1;Parent=MS.gene49565 |
| chr5.1 | exon | 29266456 | 29266507 | 29266456 | ID=MS.gene49565.t1.exon1;Parent=MS.gene49565.t1 |
| chr5.1 | CDS | 29266456 | 29266507 | 29266456 | ID=cds.MS.gene49565.t1;Parent=MS.gene49565.t1 |
| chr5.1 | exon | 29266582 | 29266640 | 29266582 | ID=MS.gene49565.t1.exon2;Parent=MS.gene49565.t1 |
| chr5.1 | CDS | 29266582 | 29266640 | 29266582 | ID=cds.MS.gene49565.t1;Parent=MS.gene49565.t1 |
| chr5.1 | exon | 29267108 | 29267188 | 29267108 | ID=MS.gene49565.t1.exon3;Parent=MS.gene49565.t1 |
| chr5.1 | CDS | 29267108 | 29267188 | 29267108 | ID=cds.MS.gene49565.t1;Parent=MS.gene49565.t1 |
| chr5.1 | exon | 29267404 | 29267475 | 29267404 | ID=MS.gene49565.t1.exon4;Parent=MS.gene49565.t1 |
| chr5.1 | CDS | 29267404 | 29267475 | 29267404 | ID=cds.MS.gene49565.t1;Parent=MS.gene49565.t1 |
| chr5.1 | exon | 29268004 | 29268063 | 29268004 | ID=MS.gene49565.t1.exon5;Parent=MS.gene49565.t1 |
| chr5.1 | CDS | 29268004 | 29268063 | 29268004 | ID=cds.MS.gene49565.t1;Parent=MS.gene49565.t1 |
| chr5.1 | exon | 29269176 | 29269253 | 29269176 | ID=MS.gene49565.t1.exon6;Parent=MS.gene49565.t1 |
| chr5.1 | CDS | 29269176 | 29269253 | 29269176 | ID=cds.MS.gene49565.t1;Parent=MS.gene49565.t1 |
| chr5.1 | exon | 29271478 | 29271549 | 29271478 | ID=MS.gene49565.t1.exon7;Parent=MS.gene49565.t1 |
| chr5.1 | CDS | 29271478 | 29271549 | 29271478 | ID=cds.MS.gene49565.t1;Parent=MS.gene49565.t1 |
| chr5.1 | exon | 29272352 | 29272375 | 29272352 | ID=MS.gene49565.t1.exon8;Parent=MS.gene49565.t1 |
| chr5.1 | CDS | 29272352 | 29272375 | 29272352 | ID=cds.MS.gene49565.t1;Parent=MS.gene49565.t1 |
| Gene Sequence |
| Protein sequence |
