Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49627.t1 | KEH27785.1 | 94 | 484 | 27 | 2 | 1 | 482 | 1 | 484 | 4.30E-263 | 916.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49627.t1 | A0A072UPL6 | 94.0 | 484 | 27 | 2 | 1 | 482 | 1 | 484 | 3.1e-263 | 916.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene49627 | 0.811568 | 6.56E-51 | -1.69E-46 |
| MS.gene04919 | MS.gene49627 | 0.807014 | 6.22E-50 | -1.69E-46 |
| MS.gene04920 | MS.gene49627 | 0.826285 | 2.95E-54 | -1.69E-46 |
| MS.gene049283 | MS.gene49627 | 0.877794 | 4.72E-69 | -1.69E-46 |
| MS.gene049419 | MS.gene49627 | -0.803493 | 3.40E-49 | -1.69E-46 |
| MS.gene049499 | MS.gene49627 | 0.81198 | 5.34E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene49627 | 0.816073 | 6.67E-52 | -1.69E-46 |
| MS.gene04998 | MS.gene49627 | 0.827799 | 1.28E-54 | -1.69E-46 |
| MS.gene050414 | MS.gene49627 | 0.823565 | 1.29E-53 | -1.69E-46 |
| MS.gene050571 | MS.gene49627 | 0.816034 | 6.81E-52 | -1.69E-46 |
| MS.gene050646 | MS.gene49627 | 0.800527 | 1.38E-48 | -1.69E-46 |
| MS.gene050654 | MS.gene49627 | 0.818618 | 1.78E-52 | -1.69E-46 |
| MS.gene050945 | MS.gene49627 | 0.812975 | 3.24E-51 | -1.69E-46 |
| MS.gene051043 | MS.gene49627 | 0.826754 | 2.28E-54 | -1.69E-46 |
| MS.gene051226 | MS.gene49627 | 0.810195 | 1.30E-50 | -1.69E-46 |
| MS.gene052016 | MS.gene49627 | 0.801224 | 9.96E-49 | -1.69E-46 |
| MS.gene053295 | MS.gene49627 | 0.817081 | 3.97E-52 | -1.69E-46 |
| MS.gene053298 | MS.gene49627 | 0.825198 | 5.34E-54 | -1.69E-46 |
| MS.gene053564 | MS.gene49627 | 0.801293 | 9.64E-49 | -1.69E-46 |
| MS.gene053726 | MS.gene49627 | 0.820988 | 5.13E-53 | -1.69E-46 |
| MS.gene053931 | MS.gene49627 | 0.831664 | 1.47E-55 | -1.69E-46 |
| MS.gene053963 | MS.gene49627 | 0.809663 | 1.69E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene49627 | 0.876705 | 1.13E-68 | -1.69E-46 |
| MS.gene054893 | MS.gene49627 | 0.887895 | 9.54E-73 | -1.69E-46 |
| MS.gene054957 | MS.gene49627 | 0.83832 | 3.08E-57 | -1.69E-46 |
| MS.gene055150 | MS.gene49627 | 0.848496 | 5.91E-60 | -1.69E-46 |
| MS.gene057093 | MS.gene49627 | 0.815352 | 9.66E-52 | -1.69E-46 |
| MS.gene057155 | MS.gene49627 | 0.801333 | 9.46E-49 | -1.69E-46 |
| MS.gene057174 | MS.gene49627 | 0.81648 | 5.41E-52 | -1.69E-46 |
| MS.gene057622 | MS.gene49627 | 0.928739 | 1.88E-92 | -1.69E-46 |
| MS.gene058095 | MS.gene49627 | 0.820254 | 7.56E-53 | -1.69E-46 |
| MS.gene058159 | MS.gene49627 | 0.822413 | 2.40E-53 | -1.69E-46 |
| MS.gene058429 | MS.gene49627 | 0.814324 | 1.63E-51 | -1.69E-46 |
| MS.gene058592 | MS.gene49627 | 0.815422 | 9.32E-52 | -1.69E-46 |
| MS.gene05878 | MS.gene49627 | 0.839575 | 1.46E-57 | -1.69E-46 |
| MS.gene059146 | MS.gene49627 | 0.818672 | 1.73E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene49627 | 0.863224 | 2.90E-64 | -1.69E-46 |
| MS.gene05956 | MS.gene49627 | 0.845376 | 4.22E-59 | -1.69E-46 |
| MS.gene05985 | MS.gene49627 | -0.83186 | 1.31E-55 | -1.69E-46 |
| MS.gene059901 | MS.gene49627 | -0.832709 | 8.10E-56 | -1.69E-46 |
| MS.gene06023 | MS.gene49627 | 0.810596 | 1.07E-50 | -1.69E-46 |
| MS.gene060259 | MS.gene49627 | 0.828541 | 8.49E-55 | -1.69E-46 |
| MS.gene060413 | MS.gene49627 | 0.809155 | 2.18E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene49627 | 0.801957 | 7.05E-49 | -1.69E-46 |
| MS.gene060964 | MS.gene49627 | 0.815073 | 1.11E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49627.t1 | MTR_5g037540 | 95.661 | 484 | 19 | 2 | 1 | 482 | 1 | 484 | 0.0 | 956 |
| MS.gene49627.t1 | MTR_5g037540 | 95.652 | 483 | 19 | 2 | 1 | 481 | 1 | 483 | 0.0 | 955 |
| MS.gene49627.t1 | MTR_8g061880 | 58.103 | 506 | 181 | 8 | 1 | 482 | 1 | 499 | 0.0 | 568 |
| MS.gene49627.t1 | MTR_2g011370 | 52.459 | 305 | 111 | 7 | 203 | 476 | 1 | 302 | 1.41e-99 | 302 |
| MS.gene49627.t1 | MTR_2g011370 | 46.358 | 151 | 74 | 3 | 1 | 149 | 1 | 146 | 4.89e-35 | 133 |
| MS.gene49627.t1 | MTR_6g011240 | 51.768 | 311 | 110 | 5 | 203 | 476 | 1 | 308 | 2.82e-87 | 270 |
| MS.gene49627.t1 | MTR_6g011240 | 47.682 | 151 | 74 | 3 | 1 | 149 | 1 | 148 | 6.87e-37 | 138 |
| MS.gene49627.t1 | MTR_8g468650 | 67.347 | 147 | 42 | 2 | 218 | 364 | 20 | 160 | 1.21e-65 | 211 |
| MS.gene49627.t1 | MTR_8g468650 | 44.526 | 137 | 66 | 4 | 13 | 147 | 17 | 145 | 1.65e-24 | 101 |
| MS.gene49627.t1 | MTR_8g469980 | 59.195 | 174 | 60 | 3 | 269 | 435 | 718 | 887 | 8.57e-57 | 202 |
| MS.gene49627.t1 | MTR_8g469730 | 60.714 | 112 | 26 | 2 | 242 | 353 | 182 | 275 | 1.57e-38 | 142 |
| MS.gene49627.t1 | MTR_8g469800 | 67.105 | 76 | 25 | 0 | 383 | 458 | 14 | 89 | 1.53e-27 | 109 |
| MS.gene49627.t1 | MTR_8g469800 | 55.102 | 49 | 22 | 0 | 202 | 250 | 145 | 193 | 1.99e-12 | 66.6 |
| MS.gene49627.t1 | MTR_0785s0010 | 70.588 | 51 | 15 | 0 | 396 | 446 | 1 | 51 | 1.46e-18 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49627.t1 | AT1G27100 | 49.421 | 518 | 215 | 11 | 1 | 476 | 1 | 513 | 1.94e-154 | 449 |
| MS.gene49627.t1 | AT1G59710 | 61.433 | 293 | 99 | 3 | 203 | 481 | 1 | 293 | 2.37e-116 | 345 |
| MS.gene49627.t1 | AT1G59710 | 47.682 | 151 | 73 | 3 | 1 | 149 | 1 | 147 | 6.09e-35 | 133 |
| MS.gene49627.t1 | AT1G59710 | 61.433 | 293 | 99 | 3 | 203 | 481 | 1 | 293 | 2.58e-116 | 344 |
| MS.gene49627.t1 | AT1G59710 | 47.682 | 151 | 73 | 3 | 1 | 149 | 1 | 147 | 5.76e-35 | 132 |
| MS.gene49627.t1 | AT3G28630 | 57.285 | 302 | 108 | 5 | 200 | 482 | 30 | 329 | 3.81e-106 | 319 |
| MS.gene49627.t1 | AT3G28630 | 45.638 | 149 | 74 | 3 | 1 | 147 | 33 | 176 | 5.25e-34 | 131 |
| MS.gene49627.t1 | AT3G28630 | 58.824 | 289 | 110 | 5 | 200 | 482 | 30 | 315 | 4.46e-105 | 316 |
| MS.gene49627.t1 | AT3G28630 | 45.638 | 149 | 74 | 3 | 1 | 147 | 33 | 176 | 5.15e-34 | 130 |
| MS.gene49627.t1 | AT1G69890 | 55.755 | 278 | 116 | 2 | 203 | 476 | 1 | 275 | 3.55e-102 | 307 |
| MS.gene49627.t1 | AT1G69890 | 42.282 | 149 | 81 | 3 | 1 | 149 | 1 | 144 | 8.00e-32 | 123 |
| MS.gene49627.t1 | AT3G01311 | 52.817 | 284 | 112 | 6 | 203 | 482 | 1 | 266 | 4.76e-96 | 292 |
| MS.gene49627.t1 | AT3G01311 | 43.114 | 167 | 83 | 5 | 1 | 160 | 1 | 162 | 6.23e-30 | 119 |
| MS.gene49627.t1 | AT3G01311 | 52.837 | 282 | 111 | 6 | 203 | 480 | 1 | 264 | 1.31e-95 | 290 |
| MS.gene49627.t1 | AT3G01311 | 43.114 | 167 | 83 | 5 | 1 | 160 | 1 | 162 | 2.68e-30 | 119 |
| MS.gene49627.t1 | AT1G69900 | 43.229 | 384 | 170 | 9 | 1 | 339 | 1 | 381 | 8.77e-85 | 266 |
| MS.gene49627.t1 | AT1G69900 | 53.333 | 150 | 68 | 2 | 203 | 350 | 1 | 150 | 9.31e-46 | 164 |
| MS.gene49627.t1 | AT1G59710 | 74.497 | 149 | 38 | 0 | 203 | 351 | 1 | 149 | 5.64e-79 | 245 |
| MS.gene49627.t1 | AT1G59710 | 47.682 | 151 | 73 | 3 | 1 | 149 | 1 | 147 | 5.56e-36 | 132 |
Find 116 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATGATTCGTTTGTGAAAA+TGG | 0.116730 | 5.1:+28298108 | MS.gene49627:CDS |
| CTCTTTCCTGTTAGGGTTAA+GGG | 0.195743 | 5.1:-28297935 | None:intergenic |
| ACCTGCATAGTCACATTATT+TGG | 0.198434 | 5.1:-28304393 | None:intergenic |
| GCCAATACGTGACGGGTTTC+AGG | 0.220129 | 5.1:+28298009 | MS.gene49627:CDS |
| ATATTACCCTCTTTCCTGTT+AGG | 0.251409 | 5.1:-28297943 | None:intergenic |
| GAGAGTTTGTTATCTTCTTT+TGG | 0.254540 | 5.1:+28298175 | MS.gene49627:CDS |
| CCTCTTTCCTGTTAGGGTTA+AGG | 0.264638 | 5.1:-28297936 | None:intergenic |
| CGGATAACGTTGTCGTAGTT+TGG | 0.277416 | 5.1:-28303107 | None:intergenic |
| ACAGAAGAATCCAAAGTCTT+TGG | 0.280690 | 5.1:-28303218 | None:intergenic |
| ACACGAACACCATCCCTTAC+AGG | 0.295971 | 5.1:-28303251 | None:intergenic |
| CTTTGGATTCTTCTGTTGAA+TGG | 0.328359 | 5.1:+28303225 | MS.gene49627:CDS |
| TGAGGAAGAGACAGGGTTAG+AGG | 0.334303 | 5.1:+28304305 | MS.gene49627:CDS |
| GAGCTTAATGATCTTTGATT+TGG | 0.335600 | 5.1:-28297726 | None:intergenic |
| TGGCTCCGTTTCGGCTTTGT+CGG | 0.341645 | 5.1:-28297799 | None:intergenic |
| TGTGACTATGCAGGTTGTTT+TGG | 0.349994 | 5.1:+28304401 | MS.gene49627:CDS |
| CGTTGTTGTCGTCGGCGATA+AGG | 0.350621 | 5.1:-28297769 | None:intergenic |
| GTGGGATGTTGAAGGTGTTA+TGG | 0.369271 | 5.1:+28298141 | MS.gene49627:CDS |
| AAACTCATAACCAAGTAATA+AGG | 0.369988 | 5.1:+28297864 | MS.gene49627:CDS |
| CTCACTTGGGTCGTCGCCGC+CGG | 0.370649 | 5.1:+28298249 | MS.gene49627:CDS |
| CCGTATCCCTTAACCCTAAC+AGG | 0.371672 | 5.1:+28297929 | MS.gene49627:CDS |
| AGGTGTGCAGGGATATTCTT+TGG | 0.376870 | 5.1:+28304242 | MS.gene49627:CDS |
| TCAGACACTCCATTTCTTCT+CGG | 0.380641 | 5.1:+28303164 | MS.gene49627:CDS |
| CCAGTCATGCCGAGAAGAAA+TGG | 0.382127 | 5.1:-28303173 | None:intergenic |
| TTGGTTCTTCCTTTCTCAAA+AGG | 0.382208 | 5.1:+28304420 | MS.gene49627:CDS |
| AACTCTTTAACCTTATTACT+TGG | 0.388667 | 5.1:-28297874 | None:intergenic |
| CATTCCGCTTCGAAGCTTGT+TGG | 0.389295 | 5.1:-28302946 | None:intergenic |
| TATTACCCTCTTTCCTGTTA+GGG | 0.391440 | 5.1:-28297942 | None:intergenic |
| TCAAACTAGTCCAAAGACTT+TGG | 0.393826 | 5.1:+28303208 | MS.gene49627:CDS |
| TTTGGATTCTTCTGTTGAAT+GGG | 0.409074 | 5.1:+28303226 | MS.gene49627:CDS |
| ATTCCGCTTCGAAGCTTGTT+GGG | 0.414117 | 5.1:-28302945 | None:intergenic |
| CTGTTGAATGGGAACCTGTA+AGG | 0.420142 | 5.1:+28303237 | MS.gene49627:CDS |
| TAGGACTGTTACTCAGGATT+GGG | 0.427974 | 5.1:+28303361 | MS.gene49627:CDS |
| TCCGCATAGGACTGTTACTC+AGG | 0.434544 | 5.1:+28303355 | MS.gene49627:CDS |
| ACCGTTTCTGCCTTGTGAAA+CGG | 0.443389 | 5.1:-28303048 | None:intergenic |
| CCTGTTAGGGTTAAGGGATA+CGG | 0.444235 | 5.1:-28297929 | None:intergenic |
| ACCTGAAACCCGTCACGTAT+TGG | 0.446082 | 5.1:-28298010 | None:intergenic |
| ATGGAGTGTCTGAAGCTGTT+AGG | 0.450466 | 5.1:-28303154 | None:intergenic |
| AGTGAGTGATGAAGGTGTGC+AGG | 0.455263 | 5.1:+28304230 | MS.gene49627:CDS |
| TCCGTTTCACAAGGCAGAAA+CGG | 0.456163 | 5.1:+28303047 | MS.gene49627:CDS |
| GAGTTAGAAAACGGTGTAGA+TGG | 0.456733 | 5.1:+28297971 | MS.gene49627:CDS |
| CCATTTCTTCTCGGCATGAC+TGG | 0.457330 | 5.1:+28303173 | MS.gene49627:CDS |
| GGAATTGAGCAAGAAGATTG+AGG | 0.467306 | 5.1:+28304287 | MS.gene49627:CDS |
| GTGAAGCTGAAGACGAGGTA+TGG | 0.469674 | 5.1:+28303272 | MS.gene49627:CDS |
| AAGAAGATTGAGGAAGAGAC+AGG | 0.469690 | 5.1:+28304297 | MS.gene49627:CDS |
| AGGAAAGAGGGTAATATTAA+CGG | 0.470116 | 5.1:+28297949 | MS.gene49627:CDS |
| ATAGGACTGTTACTCAGGAT+TGG | 0.472028 | 5.1:+28303360 | MS.gene49627:CDS |
| GGCATGCTAGTTTCAAAAGC+TGG | 0.477841 | 5.1:-28303440 | None:intergenic |
| GAGGAAGAGACAGGGTTAGA+GGG | 0.482199 | 5.1:+28304306 | MS.gene49627:CDS |
| ATCCGTCTCAAAAGCTGTTA+CGG | 0.495453 | 5.1:+28303125 | MS.gene49627:CDS |
| AAAGTCCGACAAAGCCGAAA+CGG | 0.500186 | 5.1:+28297794 | MS.gene49627:CDS |
| ATTCGCCCCTCCATCTTCCT+AGG | 0.509706 | 5.1:-28304174 | None:intergenic |
| TCCAAATAATGTGACTATGC+AGG | 0.511969 | 5.1:+28304392 | MS.gene49627:CDS |
| GTTTCAAAAGCTGGAGCAGA+AGG | 0.512100 | 5.1:-28303431 | None:intergenic |
| GGATAAAGCTTTCCATTCAA+AGG | 0.513084 | 5.1:-28304351 | None:intergenic |
| TTACAACGGAAAATATTTAA+CGG | 0.519900 | 5.1:+28297895 | MS.gene49627:CDS |
| CGGCGATAAGGTATTTGTCT+AGG | 0.527943 | 5.1:-28297757 | None:intergenic |
| GATGGAGAAGTGAGTGATGA+AGG | 0.528934 | 5.1:+28304222 | MS.gene49627:CDS |
| TGTCGTGGTGGCTTCTGAGA+CGG | 0.533737 | 5.1:-28302995 | None:intergenic |
| AGCTGAGGAGTTGTTGTGGG+AGG | 0.535173 | 5.1:+28298035 | MS.gene49627:CDS |
| CCTTAACCCTAACAGGAAAG+AGG | 0.535529 | 5.1:+28297936 | MS.gene49627:CDS |
| GGGTCGTCGCCGCCGGCGAG+AGG | 0.541837 | 5.1:+28298256 | MS.gene49627:CDS |
| TGCATAGTCACATTATTTGG+AGG | 0.542912 | 5.1:-28304390 | None:intergenic |
| TGATGCATCACCTAGGAAGA+TGG | 0.544905 | 5.1:+28304164 | MS.gene49627:CDS |
| TTTCAAAGGGAATGGAGTTG+AGG | 0.545121 | 5.1:+28304266 | MS.gene49627:CDS |
| TGAAGCTGAAGACGAGGTAT+GGG | 0.549313 | 5.1:+28303273 | MS.gene49627:CDS |
| CTAGGAGGATTCACCACAGC+AGG | 0.553912 | 5.1:-28303467 | None:intergenic |
| CTCCATCATCTTCAGCAACA+TGG | 0.557123 | 5.1:-28304206 | None:intergenic |
| CAACAAGCTTCGAAGCGGAA+TGG | 0.557721 | 5.1:+28302947 | MS.gene49627:CDS |
| CTTAACCCTAACAGGAAAGA+GGG | 0.559872 | 5.1:+28297937 | MS.gene49627:CDS |
| GAAAAGCTAGCAGAAACACT+AGG | 0.561376 | 5.1:-28303485 | None:intergenic |
| TACCATGTTGCTGAAGATGA+TGG | 0.563040 | 5.1:+28304204 | MS.gene49627:CDS |
| GTGAGTGATGAAGGTGTGCA+GGG | 0.570525 | 5.1:+28304231 | MS.gene49627:CDS |
| TGAAGCTGAGGAGTTGTTGT+GGG | 0.573285 | 5.1:+28298032 | MS.gene49627:CDS |
| ATATTAACGGAGTTAGAAAA+CGG | 0.580788 | 5.1:+28297962 | MS.gene49627:CDS |
| TGTTGAATGGGAACCTGTAA+GGG | 0.581672 | 5.1:+28303238 | MS.gene49627:CDS |
| GAGCCATTAAAAGAGCTCAA+TGG | 0.582431 | 5.1:+28297816 | MS.gene49627:CDS |
| AATGGCAGCCAATACGTGAC+GGG | 0.583517 | 5.1:+28298002 | MS.gene49627:CDS |
| CTTATCGCCGACGACAACAA+CGG | 0.587613 | 5.1:+28297770 | MS.gene49627:CDS |
| GGAATGGTGGGTTGCCACCG+TGG | 0.591207 | 5.1:+28303309 | MS.gene49627:CDS |
| TGTACTAAGAGTCCTTTGAA+TGG | 0.592487 | 5.1:+28304339 | MS.gene49627:CDS |
| GGATTCACCACAGCAGGAGA+AGG | 0.593106 | 5.1:-28303461 | None:intergenic |
| CGATAAGGTATTTGTCTAGG+TGG | 0.599814 | 5.1:-28297754 | None:intergenic |
| CTGCTAAGAGATATTTGTCG+TGG | 0.604641 | 5.1:-28303010 | None:intergenic |
| ACCTGAAAACTTCCTCTCGC+CGG | 0.605188 | 5.1:-28298268 | None:intergenic |
| GTTCATCAAACAACGCAAGA+TGG | 0.611011 | 5.1:+28303069 | MS.gene49627:CDS |
| GCATCACCTAGGAAGATGGA+GGG | 0.611437 | 5.1:+28304168 | MS.gene49627:CDS |
| CTAAGAGATATTTGTCGTGG+TGG | 0.618659 | 5.1:-28303007 | None:intergenic |
| ATGGTGGGTTGCCACCGTGG+AGG | 0.619425 | 5.1:+28303312 | MS.gene49627:CDS |
| ATCGTTACACTGTTCCTCCA+CGG | 0.621036 | 5.1:-28298085 | None:intergenic |
| CCAAGTGAGAAAACACTCAT+CGG | 0.623585 | 5.1:-28298235 | None:intergenic |
| GTGAAGCTGAGGAGTTGTTG+TGG | 0.625119 | 5.1:+28298031 | MS.gene49627:CDS |
| ACGGGTTTCAGGTGAAGCTG+AGG | 0.630925 | 5.1:+28298020 | MS.gene49627:CDS |
| TAGCATGCCTTCTCCTGCTG+TGG | 0.631364 | 5.1:+28303454 | MS.gene49627:CDS |
| TGCATCACCTAGGAAGATGG+AGG | 0.637928 | 5.1:+28304167 | MS.gene49627:CDS |
| GAATGGCAGCCAATACGTGA+CGG | 0.639715 | 5.1:+28298001 | MS.gene49627:CDS |
| AAACCCAACAAGCTTCGAAG+CGG | 0.642582 | 5.1:+28302942 | MS.gene49627:CDS |
| TGCGTCACAGTATTCCTCCA+CGG | 0.649285 | 5.1:-28303326 | None:intergenic |
| GATTCGTTTGTGAAAATGGA+GGG | 0.649421 | 5.1:+28298112 | MS.gene49627:CDS |
| AGAAGATTGAGGAAGAGACA+GGG | 0.656890 | 5.1:+28304298 | MS.gene49627:CDS |
| CGAATGATGATGCATCACCT+AGG | 0.657346 | 5.1:+28304157 | MS.gene49627:CDS |
| GGAGGAAGCTGCAAACGAAG+AGG | 0.659577 | 5.1:-28304372 | None:intergenic |
| GATGAAGAATCCGTTTCACA+AGG | 0.662746 | 5.1:+28303038 | MS.gene49627:CDS |
| ATAAGGTTAAAGAGTTACAA+CGG | 0.664727 | 5.1:+28297881 | MS.gene49627:CDS |
| TGACGCATGATATTCCGCAT+AGG | 0.668875 | 5.1:+28303342 | MS.gene49627:CDS |
| TAAAAGAGCTCAATGGACAG+TGG | 0.674821 | 5.1:+28297823 | MS.gene49627:CDS |
| TGAAAACTTCCTCTCGCCGG+CGG | 0.678031 | 5.1:-28298265 | None:intergenic |
| CATCACCTAGGAAGATGGAG+GGG | 0.680036 | 5.1:+28304169 | MS.gene49627:CDS |
| GAAACGGCAGTAATCCGCCG+TGG | 0.683668 | 5.1:+28298068 | MS.gene49627:CDS |
| GTTACACTGTTCCTCCACGG+CGG | 0.685062 | 5.1:-28298082 | None:intergenic |
| TTCGTGTGAAGCTGAAGACG+AGG | 0.686023 | 5.1:+28303267 | MS.gene49627:CDS |
| ACGGCAGTAATCCGCCGTGG+AGG | 0.687896 | 5.1:+28298071 | MS.gene49627:CDS |
| TGATTCGTTTGTGAAAATGG+AGG | 0.688159 | 5.1:+28298111 | MS.gene49627:CDS |
| AAGCTAGCAGAAACACTAGG+AGG | 0.698690 | 5.1:-28303482 | None:intergenic |
| GAATGGGAACCTGTAAGGGA+TGG | 0.702577 | 5.1:+28303242 | MS.gene49627:CDS |
| TCCTGAGTAACAGTCCTATG+CGG | 0.703666 | 5.1:-28303356 | None:intergenic |
| GTCACAGTATTCCTCCACGG+TGG | 0.799476 | 5.1:-28303323 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATATATTTTTTTTAAT+TGG | + | chr5.1:28303837-28303856 | MS.gene49627:intron | 0.0% |
| !!! | TATATATATTTTTTTTAATT+GGG | + | chr5.1:28303838-28303857 | MS.gene49627:intron | 0.0% |
| !!! | AATATTTTTCTTGTTAAAAA+TGG | + | chr5.1:28298852-28298871 | MS.gene49627:intron | 10.0% |
| !!! | ATGTTACTTATTTTAATTTT+GGG | - | chr5.1:28300378-28300397 | None:intergenic | 10.0% |
| !!! | ATTATATATGAATTCTTTTT+TGG | - | chr5.1:28301126-28301145 | None:intergenic | 10.0% |
| !!! | GTTTTAAAAAAATCAATTAT+AGG | - | chr5.1:28300492-28300511 | None:intergenic | 10.0% |
| !!! | TATAATTTGATAATTCATAT+GGG | + | chr5.1:28299113-28299132 | MS.gene49627:intron | 10.0% |
| !!! | TATATATTTTTTTTAATTGG+GGG | + | chr5.1:28303840-28303859 | MS.gene49627:intron | 10.0% |
| !!! | TTATAATTTGATAATTCATA+TGG | + | chr5.1:28299112-28299131 | MS.gene49627:intron | 10.0% |
| !!! | TTATCTTTTTAAAAACAAAA+TGG | - | chr5.1:28300333-28300352 | None:intergenic | 10.0% |
| !!! | TTTTTTTTATTTTTAACTTG+TGG | - | chr5.1:28299055-28299074 | None:intergenic | 10.0% |
| !! | AAAAAGAATGATTATTGAAA+TGG | + | chr5.1:28301569-28301588 | MS.gene49627:intron | 15.0% |
| !! | AAAAGAATGATTATTGAAAT+GGG | + | chr5.1:28301570-28301589 | MS.gene49627:intron | 15.0% |
| !! | AAAATGAAAACATAAACAAA+AGG | + | chr5.1:28301401-28301420 | MS.gene49627:intron | 15.0% |
| !! | AAAGAAAAATTTAGTAAGAT+TGG | + | chr5.1:28299361-28299380 | MS.gene49627:intron | 15.0% |
| !! | ACAAGTTATTAATAGATATA+AGG | - | chr5.1:28300792-28300811 | None:intergenic | 15.0% |
| !! | AGATATTACTTAATACTATA+AGG | + | chr5.1:28300953-28300972 | MS.gene49627:intron | 15.0% |
| !! | ATTAACTTATTGTCATTAAA+AGG | + | chr5.1:28303949-28303968 | MS.gene49627:intron | 15.0% |
| !! | GCAAAAAAAAAAAAAAAAAG+AGG | + | chr5.1:28299686-28299705 | MS.gene49627:intron | 15.0% |
| !! | TAAACTTATAGTAACTATAA+GGG | + | chr5.1:28299770-28299789 | MS.gene49627:intron | 15.0% |
| !! | TAATATATAAATGTGTAACT+GGG | - | chr5.1:28299660-28299679 | None:intergenic | 15.0% |
| !! | TATAGTAATCTAATTTATGT+CGG | - | chr5.1:28302491-28302510 | None:intergenic | 15.0% |
| !! | TCACTAAAATGTAATATTTA+AGG | - | chr5.1:28299963-28299982 | None:intergenic | 15.0% |
| !! | TTAAGATCCAATAAATTTAA+AGG | - | chr5.1:28299440-28299459 | None:intergenic | 15.0% |
| !!! | AAAAAAATTGATACTTTTGA+AGG | - | chr5.1:28303673-28303692 | None:intergenic | 15.0% |
| !!! | AAAGTATCAATTTTTTTATC+TGG | + | chr5.1:28303676-28303695 | MS.gene49627:intron | 15.0% |
| !!! | AAAGTTTTGATTTTTTTATC+TGG | + | chr5.1:28303536-28303555 | MS.gene49627:intron | 15.0% |
| !!! | AAGTATCAATTTTTTTATCT+GGG | + | chr5.1:28303677-28303696 | MS.gene49627:intron | 15.0% |
| !!! | AAGTTTTGATTTTTTTATCT+GGG | + | chr5.1:28303537-28303556 | MS.gene49627:intron | 15.0% |
| !!! | ATTTATATCCTTCATTTTTA+AGG | + | chr5.1:28302068-28302087 | MS.gene49627:intron | 15.0% |
| !!! | CTAAAATAAGTGTTTTAAAA+TGG | - | chr5.1:28302864-28302883 | None:intergenic | 15.0% |
| !!! | GATGTTACTTATTTTAATTT+TGG | - | chr5.1:28300379-28300398 | None:intergenic | 15.0% |
| !!! | TATCTAATACATTTTTTGAA+AGG | + | chr5.1:28299930-28299949 | MS.gene49627:intron | 15.0% |
| !!! | TTTTTTATTTTTTGTGAAGT+TGG | + | chr5.1:28300113-28300132 | MS.gene49627:intron | 15.0% |
| !! | AAACTTGTCTACTAAAAATT+CGG | + | chr5.1:28300508-28300527 | MS.gene49627:intron | 20.0% |
| !! | AAAGAATGATTATTGAAATG+GGG | + | chr5.1:28301571-28301590 | MS.gene49627:intron | 20.0% |
| !! | AAATCAATTATAGGAATTCA+TGG | - | chr5.1:28300483-28300502 | None:intergenic | 20.0% |
| !! | AACACTTCATAAAACTAAAT+TGG | - | chr5.1:28303782-28303801 | None:intergenic | 20.0% |
| !! | AAGATATAGACACAAAAATA+TGG | - | chr5.1:28299797-28299816 | None:intergenic | 20.0% |
| !! | AATCAATTATAGGAATTCAT+GGG | - | chr5.1:28300482-28300501 | None:intergenic | 20.0% |
| !! | AATCTAGATGATTAATATCT+AGG | + | chr5.1:28302104-28302123 | MS.gene49627:intron | 20.0% |
| !! | AATTCAAATTTCTACTTCTA+CGG | - | chr5.1:28301987-28302006 | None:intergenic | 20.0% |
| !! | AATTCAACTCATATTAAACA+AGG | + | chr5.1:28302193-28302212 | MS.gene49627:intron | 20.0% |
| !! | CAAAAGTCCTTTAAATTTAT+TGG | + | chr5.1:28299430-28299449 | MS.gene49627:intron | 20.0% |
| !! | CAAGATTGATCTTATTAATT+TGG | + | chr5.1:28301228-28301247 | MS.gene49627:intron | 20.0% |
| !! | CATAAATTAGATTACTATAG+AGG | + | chr5.1:28302492-28302511 | MS.gene49627:intron | 20.0% |
| !! | CTAAACTTATAGTAACTATA+AGG | + | chr5.1:28299769-28299788 | MS.gene49627:intron | 20.0% |
| !! | CTAATATATAAATGTGTAAC+TGG | - | chr5.1:28299661-28299680 | None:intergenic | 20.0% |
| !! | CTTATAGTTACTATAAGTTT+AGG | - | chr5.1:28299771-28299790 | None:intergenic | 20.0% |
| !! | TAAAAACTCAATTCATTTGA+TGG | - | chr5.1:28300087-28300106 | None:intergenic | 20.0% |
| !! | TAAATGATTTCATCTACTAA+GGG | - | chr5.1:28300918-28300937 | None:intergenic | 20.0% |
| !! | TATTGTTAGCTCATATATAT+AGG | - | chr5.1:28301175-28301194 | None:intergenic | 20.0% |
| !! | TGTGAATATCAAAGAAATTA+AGG | - | chr5.1:28301443-28301462 | None:intergenic | 20.0% |
| !! | TTACAACGGAAAATATTTAA+CGG | + | chr5.1:28297895-28297914 | MS.gene49627:CDS | 20.0% |
| !! | TTATATATGTGAATGAAAAG+TGG | - | chr5.1:28302765-28302784 | None:intergenic | 20.0% |
| !! | TTCTATTTCCTTAAAAATGA+AGG | - | chr5.1:28302079-28302098 | None:intergenic | 20.0% |
| !!! | AAATGAAATGTTTTGTAGAA+GGG | - | chr5.1:28302801-28302820 | None:intergenic | 20.0% |
| !!! | AAGAGGTTTAGATATTTTTT+AGG | - | chr5.1:28302837-28302856 | None:intergenic | 20.0% |
| !!! | AAGTTTTTTAAACCTTAGTA+AGG | + | chr5.1:28299728-28299747 | MS.gene49627:intron | 20.0% |
| !!! | AATGACTATACCTTTTTTAA+CGG | - | chr5.1:28298817-28298836 | None:intergenic | 20.0% |
| !!! | ACAAAGTTTTTAACCTTATA+TGG | + | chr5.1:28301847-28301866 | MS.gene49627:intron | 20.0% |
| !!! | ACTAGATGTTAGATATATTT+TGG | - | chr5.1:28301254-28301273 | None:intergenic | 20.0% |
| !!! | AGAAATACATTTTTTTGTGT+GGG | + | chr5.1:28303606-28303625 | MS.gene49627:intron | 20.0% |
| !!! | AGAGGTTTAGATATTTTTTA+GGG | - | chr5.1:28302836-28302855 | None:intergenic | 20.0% |
| !!! | ATCATTCTTTTTTCTTGATT+AGG | - | chr5.1:28301561-28301580 | None:intergenic | 20.0% |
| !!! | GTTTATTGGATTTTAATGAT+GGG | - | chr5.1:28302739-28302758 | None:intergenic | 20.0% |
| !!! | TTCAATAAATTTTGTGAGAT+CGG | - | chr5.1:28299466-28299485 | None:intergenic | 20.0% |
| !!! | TTTACTTTAGTTCTTACAAA+AGG | - | chr5.1:28300257-28300276 | None:intergenic | 20.0% |
| ! | AAACTCATAACCAAGTAATA+AGG | + | chr5.1:28297864-28297883 | MS.gene49627:CDS | 25.0% |
| ! | AAAGAAATTAAGGTGATGTT+TGG | - | chr5.1:28301433-28301452 | None:intergenic | 25.0% |
| ! | AACGTGTAAACAATTTCTTT+AGG | - | chr5.1:28300874-28300893 | None:intergenic | 25.0% |
| ! | AACTCTTTAACCTTATTACT+TGG | - | chr5.1:28297877-28297896 | None:intergenic | 25.0% |
| ! | AACTTGTCTACTAAAAATTC+GGG | + | chr5.1:28300509-28300528 | MS.gene49627:intron | 25.0% |
| ! | ATAAGGTTAAAGAGTTACAA+CGG | + | chr5.1:28297881-28297900 | MS.gene49627:CDS | 25.0% |
| ! | ATATTAACGGAGTTAGAAAA+CGG | + | chr5.1:28297962-28297981 | MS.gene49627:CDS | 25.0% |
| ! | ATGCATGAATATTGTGTTTA+AGG | - | chr5.1:28298717-28298736 | None:intergenic | 25.0% |
| ! | CAATTGAGCAAAATATATTG+AGG | + | chr5.1:28298578-28298597 | MS.gene49627:intron | 25.0% |
| ! | CTATTTCATTCAAACTCTAT+TGG | - | chr5.1:28299844-28299863 | None:intergenic | 25.0% |
| ! | GAAACAAAATTATGACCATT+CGG | - | chr5.1:28298992-28299011 | None:intergenic | 25.0% |
| ! | GTAAATGATTTCATCTACTA+AGG | - | chr5.1:28300919-28300938 | None:intergenic | 25.0% |
| ! | GTCTAGTAAAACAATTCAAT+AGG | - | chr5.1:28301829-28301848 | None:intergenic | 25.0% |
| ! | TGAAATCATTTACAAGTGAA+TGG | + | chr5.1:28300926-28300945 | MS.gene49627:intron | 25.0% |
| ! | TGATTCAATCAAACCATATA+AGG | - | chr5.1:28301863-28301882 | None:intergenic | 25.0% |
| ! | TGCATGAATATTGTGTTTAA+GGG | - | chr5.1:28298716-28298735 | None:intergenic | 25.0% |
| ! | TTACAAAACCTAGTATATTG+AGG | - | chr5.1:28299019-28299038 | None:intergenic | 25.0% |
| ! | TTTCATTTATCTCTTTCTTG+CGG | - | chr5.1:28300296-28300315 | None:intergenic | 25.0% |
| ! | TTTCTTTAGTGGAAAATAGT+TGG | - | chr5.1:28300592-28300611 | None:intergenic | 25.0% |
| ! | TTTCTTTGGTTAATTGTGTT+TGG | + | chr5.1:28304121-28304140 | MS.gene49627:intron | 25.0% |
| !! | ACTTCTTTAACTTTAGACTT+AGG | - | chr5.1:28300838-28300857 | None:intergenic | 25.0% |
| !! | GAAATGAAATGTTTTGTAGA+AGG | - | chr5.1:28302802-28302821 | None:intergenic | 25.0% |
| !! | TGATGTTGACTATAATATCA+TGG | + | chr5.1:28298417-28298436 | MS.gene49627:intron | 25.0% |
| !! | TGTTATCACATTTTCTTTAG+TGG | - | chr5.1:28300603-28300622 | None:intergenic | 25.0% |
| !!! | ACAAGTTGATGATTCTTTTT+TGG | + | chr5.1:28299490-28299509 | MS.gene49627:intron | 25.0% |
| !!! | ATTTCTTTGAGACGATTTAA+GGG | + | chr5.1:28300754-28300773 | MS.gene49627:intron | 25.0% |
| !!! | ATTTTTTTTAATTGGGGGTT+AGG | + | chr5.1:28303845-28303864 | MS.gene49627:intron | 25.0% |
| !!! | CGTTTATTGGATTTTAATGA+TGG | - | chr5.1:28302740-28302759 | None:intergenic | 25.0% |
| !!! | GAGAAATACATTTTTTTGTG+TGG | + | chr5.1:28303605-28303624 | MS.gene49627:intron | 25.0% |
| !!! | GATATTCTTTGGTTTTCAAA+GGG | + | chr5.1:28304253-28304272 | MS.gene49627:CDS | 25.0% |
| !!! | TGTTTTAAAATGGAATGAAG+AGG | - | chr5.1:28302854-28302873 | None:intergenic | 25.0% |
| !!! | TTAAGCACACTTTTTTCAAA+AGG | - | chr5.1:28298794-28298813 | None:intergenic | 25.0% |
| !!! | TTTTTTATCATATGCATCCA+TGG | - | chr5.1:28299280-28299299 | None:intergenic | 25.0% |
| AGGAAAGAGGGTAATATTAA+CGG | + | chr5.1:28297949-28297968 | MS.gene49627:CDS | 30.0% | |
| ATATGAGGTATATACTATGG+TGG | - | chr5.1:28301529-28301548 | None:intergenic | 30.0% | |
| ATTAGGAAATCACGTATATG+AGG | - | chr5.1:28301544-28301563 | None:intergenic | 30.0% | |
| ATTGTTTACACGTTCTTGTT+TGG | + | chr5.1:28300880-28300899 | MS.gene49627:intron | 30.0% | |
| ATTTGTATCTGAATATCCCA+TGG | - | chr5.1:28304008-28304027 | None:intergenic | 30.0% | |
| CAACAACACTAATTAAGTCT+CGG | - | chr5.1:28302131-28302150 | None:intergenic | 30.0% | |
| CGTATATGAGGTATATACTA+TGG | - | chr5.1:28301532-28301551 | None:intergenic | 30.0% | |
| CTTCGATGAAATATCTGTTT+GGG | + | chr5.1:28299600-28299619 | MS.gene49627:intron | 30.0% | |
| GAAATCATAACTCAATTGTC+AGG | - | chr5.1:28302040-28302059 | None:intergenic | 30.0% | |
| GAGCTTAATGATCTTTGATT+TGG | - | chr5.1:28297729-28297748 | None:intergenic | 30.0% | |
| TATATGAGACTCATTGTTCA+AGG | + | chr5.1:28301773-28301792 | MS.gene49627:intron | 30.0% | |
| TCAAAAGAATCTACACTCTT+CGG | + | chr5.1:28302243-28302262 | MS.gene49627:intron | 30.0% | |
| TCTTCGATGAAATATCTGTT+TGG | + | chr5.1:28299599-28299618 | MS.gene49627:intron | 30.0% | |
| TTCAATAGGTATGACTCATA+TGG | - | chr5.1:28301815-28301834 | None:intergenic | 30.0% | |
| TTTCGTAACCTCAATATACT+AGG | + | chr5.1:28299008-28299027 | MS.gene49627:intron | 30.0% | |
| TTTGACATTCTACTTTCAAC+TGG | - | chr5.1:28301033-28301052 | None:intergenic | 30.0% | |
| TTTGGATTCTTCTGTTGAAT+GGG | + | chr5.1:28303226-28303245 | MS.gene49627:CDS | 30.0% | |
| ! | AACTCAATTCATTTGATGGT+TGG | - | chr5.1:28300083-28300102 | None:intergenic | 30.0% |
| ! | ATTTAGTAAGATTGGTCAAG+AGG | + | chr5.1:28299369-28299388 | MS.gene49627:intron | 30.0% |
| ! | ATTTTCCCCTTTCATTGTAT+AGG | + | chr5.1:28301340-28301359 | MS.gene49627:intron | 30.0% |
| ! | TGATAATGAGTTGAATTCCT+AGG | + | chr5.1:28303890-28303909 | MS.gene49627:intron | 30.0% |
| ! | TTAAGCATCAACTTACGTTT+TGG | + | chr5.1:28300191-28300210 | MS.gene49627:intron | 30.0% |
| !! | CATGGCTTTTATTTATTTCG+CGG | + | chr5.1:28298435-28298454 | MS.gene49627:intron | 30.0% |
| !! | GATTTCTTTGAGACGATTTA+AGG | + | chr5.1:28300753-28300772 | MS.gene49627:intron | 30.0% |
| !! | GTAAGTTGATGCTTAACATA+AGG | - | chr5.1:28300187-28300206 | None:intergenic | 30.0% |
| !! | TAAATCTCTTAGCCTTACTA+AGG | - | chr5.1:28299743-28299762 | None:intergenic | 30.0% |
| !! | TAATGATGGGTGAAAATTGT+GGG | - | chr5.1:28302726-28302745 | None:intergenic | 30.0% |
| !! | TCTGTACACTTTTTGTATCA+AGG | - | chr5.1:28302309-28302328 | None:intergenic | 30.0% |
| !! | TTAATGATGGGTGAAAATTG+TGG | - | chr5.1:28302727-28302746 | None:intergenic | 30.0% |
| !!! | ATTTTTTGTGAAGTTGGTCT+GGG | + | chr5.1:28300119-28300138 | MS.gene49627:intron | 30.0% |
| !!! | GAGAGTTTGTTATCTTCTTT+TGG | + | chr5.1:28298175-28298194 | MS.gene49627:CDS | 30.0% |
| !!! | GATTTAGTTACTGATTTTGC+TGG | + | chr5.1:28301636-28301655 | MS.gene49627:intron | 30.0% |
| !!! | GGATATTCTTTGGTTTTCAA+AGG | + | chr5.1:28304252-28304271 | MS.gene49627:CDS | 30.0% |
| !!! | GGTTTAGATATTTTTTAGGG+TGG | - | chr5.1:28302833-28302852 | None:intergenic | 30.0% |
| !!! | TATTTTTTGTGAAGTTGGTC+TGG | + | chr5.1:28300118-28300137 | MS.gene49627:intron | 30.0% |
| !!! | TGCTTGGTTTTTTGTTTCTT+TGG | + | chr5.1:28304107-28304126 | MS.gene49627:intron | 30.0% |
| !!! | TTATTTTTTCTCCTTTGTCC+AGG | - | chr5.1:28303922-28303941 | None:intergenic | 30.0% |
| !!! | TTTTTTTATCTGGGTTGCTT+TGG | + | chr5.1:28303546-28303565 | MS.gene49627:intron | 30.0% |
| AACAATAAACGCACTCCTTA+AGG | + | chr5.1:28300647-28300666 | MS.gene49627:intron | 35.0% | |
| AATTTCTACTTCTACGGTTG+TGG | - | chr5.1:28301981-28302000 | None:intergenic | 35.0% | |
| ACAAAAGAAAATCCCTACCA+TGG | + | chr5.1:28299260-28299279 | MS.gene49627:intron | 35.0% | |
| ACAGAAGAATCCAAAGTCTT+TGG | - | chr5.1:28303221-28303240 | None:intergenic | 35.0% | |
| ACCTGCATAGTCACATTATT+TGG | - | chr5.1:28304396-28304415 | None:intergenic | 35.0% | |
| ACTCGTTTAACCGAAAAAAG+AGG | - | chr5.1:28298692-28298711 | None:intergenic | 35.0% | |
| AGAGACCTATACAATGAAAG+GGG | - | chr5.1:28301348-28301367 | None:intergenic | 35.0% | |
| AGAGAGACCTATACAATGAA+AGG | - | chr5.1:28301350-28301369 | None:intergenic | 35.0% | |
| AGGAACATTGCGCTTTATAA+GGG | - | chr5.1:28302020-28302039 | None:intergenic | 35.0% | |
| AGGCATGGAGCAAATATATA+TGG | - | chr5.1:28300566-28300585 | None:intergenic | 35.0% | |
| ATATTACCCTCTTTCCTGTT+AGG | - | chr5.1:28297946-28297965 | None:intergenic | 35.0% | |
| ATGAAAAGTGGTGCGTTTAT+TGG | - | chr5.1:28302753-28302772 | None:intergenic | 35.0% | |
| ATGATTTCATCTACTAAGGG+AGG | - | chr5.1:28300915-28300934 | None:intergenic | 35.0% | |
| CATGAGATGTTCAATGTCTT+CGG | - | chr5.1:28300715-28300734 | None:intergenic | 35.0% | |
| CGACTAAATCTCATTCGATT+CGG | + | chr5.1:28301709-28301728 | MS.gene49627:intron | 35.0% | |
| CGATGATTCGTTTGTGAAAA+TGG | + | chr5.1:28298108-28298127 | MS.gene49627:CDS | 35.0% | |
| CGGGTTTGTAATAATCTGTT+GGG | - | chr5.1:28302590-28302609 | None:intergenic | 35.0% | |
| CTTTGGATTCTTCTGTTGAA+TGG | + | chr5.1:28303225-28303244 | MS.gene49627:CDS | 35.0% | |
| GAGAGACCTATACAATGAAA+GGG | - | chr5.1:28301349-28301368 | None:intergenic | 35.0% | |
| GATTCGTTTGTGAAAATGGA+GGG | + | chr5.1:28298112-28298131 | MS.gene49627:CDS | 35.0% | |
| GGATAAAGCTTTCCATTCAA+AGG | - | chr5.1:28304354-28304373 | None:intergenic | 35.0% | |
| GGCATGGAGCAAATATATAT+GGG | - | chr5.1:28300565-28300584 | None:intergenic | 35.0% | |
| GGGTATGTGTGTTAGTAAAA+TGG | - | chr5.1:28300358-28300377 | None:intergenic | 35.0% | |
| GTGTAGATGGTAAAAACGAA+TGG | + | chr5.1:28297984-28298003 | MS.gene49627:CDS | 35.0% | |
| GTGTGCTTAACCGTTAAAAA+AGG | + | chr5.1:28298804-28298823 | MS.gene49627:intron | 35.0% | |
| GTTGTGTAGTATCTATCCAT+GGG | + | chr5.1:28303989-28304008 | MS.gene49627:intron | 35.0% | |
| TATCATATGCATCCATGGTA+GGG | - | chr5.1:28299275-28299294 | None:intergenic | 35.0% | |
| TATTACCCTCTTTCCTGTTA+GGG | - | chr5.1:28297945-28297964 | None:intergenic | 35.0% | |
| TCAAACTAGTCCAAAGACTT+TGG | + | chr5.1:28303208-28303227 | MS.gene49627:CDS | 35.0% | |
| TCAACTGAGATAACACGTTT+GGG | - | chr5.1:28302640-28302659 | None:intergenic | 35.0% | |
| TCCAAATAATGTGACTATGC+AGG | + | chr5.1:28304392-28304411 | MS.gene49627:CDS | 35.0% | |
| TGATATTCACAAACACGTCA+AGG | + | chr5.1:28301452-28301471 | MS.gene49627:intron | 35.0% | |
| TGATTCGTTTGTGAAAATGG+AGG | + | chr5.1:28298111-28298130 | MS.gene49627:CDS | 35.0% | |
| TGCATAGTCACATTATTTGG+AGG | - | chr5.1:28304393-28304412 | None:intergenic | 35.0% | |
| TGGGTCATATGCTGTAAATT+GGG | + | chr5.1:28299619-28299638 | MS.gene49627:intron | 35.0% | |
| TGTACTAAGAGTCCTTTGAA+TGG | + | chr5.1:28304339-28304358 | MS.gene49627:CDS | 35.0% | |
| TGTTGTGTAGTATCTATCCA+TGG | + | chr5.1:28303988-28304007 | MS.gene49627:intron | 35.0% | |
| TTAACTAAGCAGATAAGACC+TGG | - | chr5.1:28301905-28301924 | None:intergenic | 35.0% | |
| TTATCATATGCATCCATGGT+AGG | - | chr5.1:28299276-28299295 | None:intergenic | 35.0% | |
| TTGGGTCATATGCTGTAAAT+TGG | + | chr5.1:28299618-28299637 | MS.gene49627:intron | 35.0% | |
| TTTCATAAGCTCAACAATCC+AGG | + | chr5.1:28299540-28299559 | MS.gene49627:intron | 35.0% | |
| ! | AATTTTCTTAGAGGGAATGG+TGG | + | chr5.1:28303296-28303315 | MS.gene49627:CDS | 35.0% |
| ! | AGGTATGGGAATTTTCTTAG+AGG | + | chr5.1:28303287-28303306 | MS.gene49627:CDS | 35.0% |
| ! | ATACAGCAATTTTCCTTGTG+TGG | + | chr5.1:28299569-28299588 | MS.gene49627:intron | 35.0% |
| ! | ATTTTCTTAGAGGGAATGGT+GGG | + | chr5.1:28303297-28303316 | MS.gene49627:CDS | 35.0% |
| ! | GGTATGGGAATTTTCTTAGA+GGG | + | chr5.1:28303288-28303307 | MS.gene49627:CDS | 35.0% |
| ! | TACAGCAATTTTCCTTGTGT+GGG | + | chr5.1:28299570-28299589 | MS.gene49627:intron | 35.0% |
| ! | TGTCCATTGAGCTCTTTTAA+TGG | - | chr5.1:28297822-28297841 | None:intergenic | 35.0% |
| ! | TTGGTTCTTCCTTTCTCAAA+AGG | + | chr5.1:28304420-28304439 | MS.gene49627:CDS | 35.0% |
| ! | TTTTCTCGTTGAATTGTGCT+TGG | + | chr5.1:28304091-28304110 | MS.gene49627:intron | 35.0% |
| !! | AAAGAGGCACTTTCTAACTA+TGG | + | chr5.1:28299702-28299721 | MS.gene49627:intron | 35.0% |
| !! | ATCAACTTACGTTTTGGATG+GGG | + | chr5.1:28300197-28300216 | MS.gene49627:intron | 35.0% |
| !! | CATCAACTTACGTTTTGGAT+GGG | + | chr5.1:28300196-28300215 | MS.gene49627:intron | 35.0% |
| !! | TAGTGGAAAATAGTTGGTGA+AGG | - | chr5.1:28300586-28300605 | None:intergenic | 35.0% |
| !! | TGATGATGTTTCTTTTGCGT+CGG | + | chr5.1:28298201-28298220 | MS.gene49627:CDS | 35.0% |
| !!! | ATATTTTTTAGGGTGGTGAG+AGG | - | chr5.1:28302826-28302845 | None:intergenic | 35.0% |
| !!! | CGTCGTTAATCCTCTTTTTT+CGG | + | chr5.1:28298679-28298698 | MS.gene49627:intron | 35.0% |
| !!! | TATTTTTTAGGGTGGTGAGA+GGG | - | chr5.1:28302825-28302844 | None:intergenic | 35.0% |
| !!! | TCTTTGGTTTTCAAAGGGAA+TGG | + | chr5.1:28304258-28304277 | MS.gene49627:CDS | 35.0% |
| !!! | TTTTTTGTGAAGTTGGTCTG+GGG | + | chr5.1:28300120-28300139 | MS.gene49627:intron | 35.0% |
| AAGAAGATTGAGGAAGAGAC+AGG | + | chr5.1:28304297-28304316 | MS.gene49627:CDS | 40.0% | |
| ACATTGCGCTTTATAAGGGT+TGG | - | chr5.1:28302016-28302035 | None:intergenic | 40.0% | |
| AGAAGATTGAGGAAGAGACA+GGG | + | chr5.1:28304298-28304317 | MS.gene49627:CDS | 40.0% | |
| AGATAACACGTTTGGGTGAA+AGG | - | chr5.1:28302633-28302652 | None:intergenic | 40.0% | |
| AGATGTTCAATGTCTTCGGA+AGG | - | chr5.1:28300711-28300730 | None:intergenic | 40.0% | |
| AGGCAAACGGAGATCAAAAT+TGG | - | chr5.1:28301954-28301973 | None:intergenic | 40.0% | |
| ATAAACGCACTCCTTAAGGT+TGG | + | chr5.1:28300651-28300670 | MS.gene49627:intron | 40.0% | |
| ATAGGACTGTTACTCAGGAT+TGG | + | chr5.1:28303360-28303379 | MS.gene49627:CDS | 40.0% | |
| ATCCGTCTCAAAAGCTGTTA+CGG | + | chr5.1:28303125-28303144 | MS.gene49627:CDS | 40.0% | |
| CAGGAACATTGCGCTTTATA+AGG | - | chr5.1:28302021-28302040 | None:intergenic | 40.0% | |
| CCAAGTGAGAAAACACTCAT+CGG | - | chr5.1:28298238-28298257 | None:intergenic | 40.0% | |
| CTAAGAGATATTTGTCGTGG+TGG | - | chr5.1:28303010-28303029 | None:intergenic | 40.0% | |
| CTCTTTCCTGTTAGGGTTAA+GGG | - | chr5.1:28297938-28297957 | None:intergenic | 40.0% | |
| CTGCTAAGAGATATTTGTCG+TGG | - | chr5.1:28303013-28303032 | None:intergenic | 40.0% | |
| CTTAACCCTAACAGGAAAGA+GGG | + | chr5.1:28297937-28297956 | MS.gene49627:CDS | 40.0% | |
| GAAAAGCTAGCAGAAACACT+AGG | - | chr5.1:28303488-28303507 | None:intergenic | 40.0% | |
| GAATTGCTCTATGAGTCTCT+TGG | + | chr5.1:28299401-28299420 | MS.gene49627:intron | 40.0% | |
| GAGATCAAAATTGGGGCATA+TGG | - | chr5.1:28301945-28301964 | None:intergenic | 40.0% | |
| GAGCCATTAAAAGAGCTCAA+TGG | + | chr5.1:28297816-28297835 | MS.gene49627:CDS | 40.0% | |
| GAGTTAGAAAACGGTGTAGA+TGG | + | chr5.1:28297971-28297990 | MS.gene49627:CDS | 40.0% | |
| GATGAAGAATCCGTTTCACA+AGG | + | chr5.1:28303038-28303057 | MS.gene49627:CDS | 40.0% | |
| GCAAACGGAGATCAAAATTG+GGG | - | chr5.1:28301952-28301971 | None:intergenic | 40.0% | |
| GCGGGTTTGTAATAATCTGT+TGG | - | chr5.1:28302591-28302610 | None:intergenic | 40.0% | |
| GGAATTGAGCAAGAAGATTG+AGG | + | chr5.1:28304287-28304306 | MS.gene49627:CDS | 40.0% | |
| GGAGCAAATATATATGGGTG+AGG | - | chr5.1:28300560-28300579 | None:intergenic | 40.0% | |
| GGCAAACGGAGATCAAAATT+GGG | - | chr5.1:28301953-28301972 | None:intergenic | 40.0% | |
| GGGGCATATGGTATACAATT+GGG | - | chr5.1:28301933-28301952 | None:intergenic | 40.0% | |
| GTCAACTGAGATAACACGTT+TGG | - | chr5.1:28302641-28302660 | None:intergenic | 40.0% | |
| GTTCATCAAACAACGCAAGA+TGG | + | chr5.1:28303069-28303088 | MS.gene49627:CDS | 40.0% | |
| TAAAAGAGCTCAATGGACAG+TGG | + | chr5.1:28297823-28297842 | MS.gene49627:CDS | 40.0% | |
| TAAACGCACTCCTTAAGGTT+GGG | + | chr5.1:28300652-28300671 | MS.gene49627:intron | 40.0% | |
| TACCATGTTGCTGAAGATGA+TGG | + | chr5.1:28304204-28304223 | MS.gene49627:CDS | 40.0% | |
| TAGGACTGTTACTCAGGATT+GGG | + | chr5.1:28303361-28303380 | MS.gene49627:CDS | 40.0% | |
| TCAGACACTCCATTTCTTCT+CGG | + | chr5.1:28303164-28303183 | MS.gene49627:CDS | 40.0% | |
| TGGGGCATATGGTATACAAT+TGG | - | chr5.1:28301934-28301953 | None:intergenic | 40.0% | |
| TGTTGAATGGGAACCTGTAA+GGG | + | chr5.1:28303238-28303257 | MS.gene49627:CDS | 40.0% | |
| TTTCAAAGGGAATGGAGTTG+AGG | + | chr5.1:28304266-28304285 | MS.gene49627:CDS | 40.0% | |
| ! | ACAGCAATTTTCCTTGTGTG+GGG | + | chr5.1:28299571-28299590 | MS.gene49627:intron | 40.0% |
| ! | AGGTCTTGATTCTGTTGACT+AGG | + | chr5.1:28300156-28300175 | MS.gene49627:intron | 40.0% |
| ! | CGATAAGGTATTTGTCTAGG+TGG | - | chr5.1:28297757-28297776 | None:intergenic | 40.0% |
| ! | CGATGAGTGTTTTCTCACTT+GGG | + | chr5.1:28298236-28298255 | MS.gene49627:CDS | 40.0% |
| ! | CTCTTTTAATGGCTCCGTTT+CGG | - | chr5.1:28297811-28297830 | None:intergenic | 40.0% |
| ! | GGGAATTTTCTTAGAGGGAA+TGG | + | chr5.1:28303293-28303312 | MS.gene49627:CDS | 40.0% |
| ! | GGTGAAAATTGTGGGTGTTT+TGG | - | chr5.1:28302718-28302737 | None:intergenic | 40.0% |
| ! | GTCAATAGTTGTCATTTGCC+AGG | + | chr5.1:28301884-28301903 | MS.gene49627:intron | 40.0% |
| ! | TGTGACTATGCAGGTTGTTT+TGG | + | chr5.1:28304401-28304420 | MS.gene49627:CDS | 40.0% |
| ! | TGTTGTGGGAGGTTTTTGAA+GGG | + | chr5.1:28298046-28298065 | MS.gene49627:CDS | 40.0% |
| ! | TTACTCAGGATTGGGTTTTG+TGG | + | chr5.1:28303369-28303388 | MS.gene49627:CDS | 40.0% |
| ! | TTGTTGTGGGAGGTTTTTGA+AGG | + | chr5.1:28298045-28298064 | MS.gene49627:CDS | 40.0% |
| !! | GAAAATAGTTGGTGAAGGCA+TGG | - | chr5.1:28300581-28300600 | None:intergenic | 40.0% |
| !! | GCATCAACTTACGTTTTGGA+TGG | + | chr5.1:28300195-28300214 | MS.gene49627:intron | 40.0% |
| !! | TACTCAGGATTGGGTTTTGT+GGG | + | chr5.1:28303370-28303389 | MS.gene49627:CDS | 40.0% |
| !! | TGAGACGATTTAAGGGCATT+AGG | + | chr5.1:28300761-28300780 | MS.gene49627:intron | 40.0% |
| !! | TGTTTTGTAGAAGGGTGTAG+TGG | - | chr5.1:28302793-28302812 | None:intergenic | 40.0% |
| !!! | ATTTTTTAGGGTGGTGAGAG+GGG | - | chr5.1:28302824-28302843 | None:intergenic | 40.0% |
| !!! | GAAAATGGAGGGTGTTTTGT+GGG | + | chr5.1:28298123-28298142 | MS.gene49627:CDS | 40.0% |
| !!! | TGAAAATGGAGGGTGTTTTG+TGG | + | chr5.1:28298122-28298141 | MS.gene49627:CDS | 40.0% |
| !!! | TGCTAGCTTTTCTAGACAAC+AGG | + | chr5.1:28303496-28303515 | MS.gene49627:CDS | 40.0% |
| AAAATTCGGGTGTTCACTCG+TGG | + | chr5.1:28300522-28300541 | MS.gene49627:intron | 45.0% | |
| AAACCCAACAAGCTTCGAAG+CGG | + | chr5.1:28302942-28302961 | MS.gene49627:CDS | 45.0% | |
| AAACGCACTCCTTAAGGTTG+GGG | + | chr5.1:28300653-28300672 | MS.gene49627:intron | 45.0% | |
| AAAGGGGAAAATGCGTGATG+TGG | - | chr5.1:28301332-28301351 | None:intergenic | 45.0% | |
| AAAGTCCGACAAAGCCGAAA+CGG | + | chr5.1:28297794-28297813 | MS.gene49627:CDS | 45.0% | |
| AAATTGCTGTATGCCACTCC+TGG | - | chr5.1:28299561-28299580 | None:intergenic | 45.0% | |
| AAGCTAGCAGAAACACTAGG+AGG | - | chr5.1:28303485-28303504 | None:intergenic | 45.0% | |
| ACCGTTTCTGCCTTGTGAAA+CGG | - | chr5.1:28303051-28303070 | None:intergenic | 45.0% | |
| AGGTGTGCAGGGATATTCTT+TGG | + | chr5.1:28304242-28304261 | MS.gene49627:CDS | 45.0% | |
| ATCGTTACACTGTTCCTCCA+CGG | - | chr5.1:28298088-28298107 | None:intergenic | 45.0% | |
| CCTCTTTCCTGTTAGGGTTA+AGG | - | chr5.1:28297939-28297958 | None:intergenic | 45.0% | |
| CCTGTTAGGGTTAAGGGATA+CGG | - | chr5.1:28297932-28297951 | None:intergenic | 45.0% | |
| CCTTAACCCTAACAGGAAAG+AGG | + | chr5.1:28297936-28297955 | MS.gene49627:CDS | 45.0% | |
| CGGATAACGTTGTCGTAGTT+TGG | - | chr5.1:28303110-28303129 | None:intergenic | 45.0% | |
| CTCCATCATCTTCAGCAACA+TGG | - | chr5.1:28304209-28304228 | None:intergenic | 45.0% | |
| CTGTTGAATGGGAACCTGTA+AGG | + | chr5.1:28303237-28303256 | MS.gene49627:CDS | 45.0% | |
| GATGGAGAAGTGAGTGATGA+AGG | + | chr5.1:28304222-28304241 | MS.gene49627:CDS | 45.0% | |
| GTTGGGTTTAGTTGTCTGCA+TGG | - | chr5.1:28302931-28302950 | None:intergenic | 45.0% | |
| GTTTCAAAAGCTGGAGCAGA+AGG | - | chr5.1:28303434-28303453 | None:intergenic | 45.0% | |
| TAACACGTTTGGGTGAAAGG+AGG | - | chr5.1:28302630-28302649 | None:intergenic | 45.0% | |
| TAACTGGGCTGTTCACATCT+TGG | - | chr5.1:28299645-28299664 | None:intergenic | 45.0% | |
| TAAGCTCAACAATCCAGGAG+TGG | + | chr5.1:28299545-28299564 | MS.gene49627:intron | 45.0% | |
| TACCTCGAATACTAGCCGAA+TGG | + | chr5.1:28298974-28298993 | MS.gene49627:intron | 45.0% | |
| TCACAAACACGTCAAGGCAA+CGG | + | chr5.1:28301458-28301477 | MS.gene49627:intron | 45.0% | |
| TCCGTTTCACAAGGCAGAAA+CGG | + | chr5.1:28303047-28303066 | MS.gene49627:CDS | 45.0% | |
| TCCTGAGTAACAGTCCTATG+CGG | - | chr5.1:28303359-28303378 | None:intergenic | 45.0% | |
| TGAAGCTGAAGACGAGGTAT+GGG | + | chr5.1:28303273-28303292 | MS.gene49627:CDS | 45.0% | |
| TGAAGCTGAGGAGTTGTTGT+GGG | + | chr5.1:28298032-28298051 | MS.gene49627:CDS | 45.0% | |
| TGAATTCCTAGGTTCGAACC+TGG | + | chr5.1:28303901-28303920 | MS.gene49627:intron | 45.0% | |
| TGACGCATGATATTCCGCAT+AGG | + | chr5.1:28303342-28303361 | MS.gene49627:CDS | 45.0% | |
| TGATGCATCACCTAGGAAGA+TGG | + | chr5.1:28304164-28304183 | MS.gene49627:CDS | 45.0% | |
| ! | AGATTGGTCAAGAGGTATGC+TGG | + | chr5.1:28299377-28299396 | MS.gene49627:intron | 45.0% |
| ! | ATGGAGTGTCTGAAGCTGTT+AGG | - | chr5.1:28303157-28303176 | None:intergenic | 45.0% |
| ! | ATTCCGCTTCGAAGCTTGTT+GGG | - | chr5.1:28302948-28302967 | None:intergenic | 45.0% |
| ! | CAGCAATTTTCCTTGTGTGG+GGG | + | chr5.1:28299572-28299591 | MS.gene49627:intron | 45.0% |
| ! | CCGATGAGTGTTTTCTCACT+TGG | + | chr5.1:28298235-28298254 | MS.gene49627:CDS | 45.0% |
| ! | CGAATGATGATGCATCACCT+AGG | + | chr5.1:28304157-28304176 | MS.gene49627:CDS | 45.0% |
| ! | CGGCGATAAGGTATTTGTCT+AGG | - | chr5.1:28297760-28297779 | None:intergenic | 45.0% |
| ! | GACTTTTCCGTTGTTGTCGT+CGG | - | chr5.1:28297780-28297799 | None:intergenic | 45.0% |
| ! | GGCATGCTAGTTTCAAAAGC+TGG | - | chr5.1:28303443-28303462 | None:intergenic | 45.0% |
| ! | GGTGTTTTGTGGGATGTTGA+AGG | + | chr5.1:28298133-28298152 | MS.gene49627:CDS | 45.0% |
| ! | TCTGGGGAAGCTTTTCTTGT+AGG | + | chr5.1:28300136-28300155 | MS.gene49627:intron | 45.0% |
| !! | ATGTCTTCGGAAGGTACTTG+AGG | - | chr5.1:28300702-28300721 | None:intergenic | 45.0% |
| !! | GGGAGGTTTTTGAAGGGAAA+CGG | + | chr5.1:28298052-28298071 | MS.gene49627:CDS | 45.0% |
| !! | GTGGGATGTTGAAGGTGTTA+TGG | + | chr5.1:28298141-28298160 | MS.gene49627:CDS | 45.0% |
| !! | TGCCGTAACAGCTTTTGAGA+CGG | - | chr5.1:28303130-28303149 | None:intergenic | 45.0% |
| !! | TTCGGAAGGTACTTGAGGAT+AGG | - | chr5.1:28300697-28300716 | None:intergenic | 45.0% |
| !!! | ATATATATTTTTTTTAATTG+GGG | + | chr5.1:28303839-28303858 | MS.gene49627:intron | 5.0% |
| AAAAACCGTGACCCTTCCAC+AGG | + | chr5.1:28302520-28302539 | MS.gene49627:intron | 50.0% | |
| AATGGCAGCCAATACGTGAC+GGG | + | chr5.1:28298002-28298021 | MS.gene49627:CDS | 50.0% | |
| ACACGAACACCATCCCTTAC+AGG | - | chr5.1:28303254-28303273 | None:intergenic | 50.0% | |
| ACCACTTGTCCCCAACCTTA+AGG | - | chr5.1:28300665-28300684 | None:intergenic | 50.0% | |
| ACCTGAAAACTTCCTCTCGC+CGG | - | chr5.1:28298271-28298290 | None:intergenic | 50.0% | |
| ACCTGAAACCCGTCACGTAT+TGG | - | chr5.1:28298013-28298032 | None:intergenic | 50.0% | |
| ACTTCTACGGTTGTGGTGTG+AGG | - | chr5.1:28301974-28301993 | None:intergenic | 50.0% | |
| AGGAAGGTTCTACCTGTGGA+AGG | - | chr5.1:28302535-28302554 | None:intergenic | 50.0% | |
| AGTGAGGAAGGTTCTACCTG+TGG | - | chr5.1:28302539-28302558 | None:intergenic | 50.0% | |
| CAACAAGCTTCGAAGCGGAA+TGG | + | chr5.1:28302947-28302966 | MS.gene49627:CDS | 50.0% | |
| CATCACCTAGGAAGATGGAG+GGG | + | chr5.1:28304169-28304188 | MS.gene49627:CDS | 50.0% | |
| CATTCCGCTTCGAAGCTTGT+TGG | - | chr5.1:28302949-28302968 | None:intergenic | 50.0% | |
| CCAGTCATGCCGAGAAGAAA+TGG | - | chr5.1:28303176-28303195 | None:intergenic | 50.0% | |
| CCATTTCTTCTCGGCATGAC+TGG | + | chr5.1:28303173-28303192 | MS.gene49627:CDS | 50.0% | |
| CCGTATCCCTTAACCCTAAC+AGG | + | chr5.1:28297929-28297948 | MS.gene49627:CDS | 50.0% | |
| CTAGGTTCGAACCTGGACAA+AGG | + | chr5.1:28303908-28303927 | MS.gene49627:intron | 50.0% | |
| CTTATCGCCGACGACAACAA+CGG | + | chr5.1:28297770-28297789 | MS.gene49627:CDS | 50.0% | |
| CTTTGTCCAGGTTCGAACCT+AGG | - | chr5.1:28303910-28303929 | None:intergenic | 50.0% | |
| GAATGGCAGCCAATACGTGA+CGG | + | chr5.1:28298001-28298020 | MS.gene49627:CDS | 50.0% | |
| GAATGGGAACCTGTAAGGGA+TGG | + | chr5.1:28303242-28303261 | MS.gene49627:CDS | 50.0% | |
| GACCATTCGGCTAGTATTCG+AGG | - | chr5.1:28298979-28298998 | None:intergenic | 50.0% | |
| GAGGAAGAGACAGGGTTAGA+GGG | + | chr5.1:28304306-28304325 | MS.gene49627:CDS | 50.0% | |
| GCATCACCTAGGAAGATGGA+GGG | + | chr5.1:28304168-28304187 | MS.gene49627:CDS | 50.0% | |
| GGAAGGTTCTACCTGTGGAA+GGG | - | chr5.1:28302534-28302553 | None:intergenic | 50.0% | |
| GTGAAAGGAGGCAATTGCGT+GGG | - | chr5.1:28302618-28302637 | None:intergenic | 50.0% | |
| GTGAAGCTGAAGACGAGGTA+TGG | + | chr5.1:28303272-28303291 | MS.gene49627:CDS | 50.0% | |
| GTGAAGCTGAGGAGTTGTTG+TGG | + | chr5.1:28298031-28298050 | MS.gene49627:CDS | 50.0% | |
| TCCGCATAGGACTGTTACTC+AGG | + | chr5.1:28303355-28303374 | MS.gene49627:CDS | 50.0% | |
| TCCTTAAGGTTGGGGACAAG+TGG | + | chr5.1:28300661-28300680 | MS.gene49627:intron | 50.0% | |
| TGAGGAAGAGACAGGGTTAG+AGG | + | chr5.1:28304305-28304324 | MS.gene49627:CDS | 50.0% | |
| TGCATCACCTAGGAAGATGG+AGG | + | chr5.1:28304167-28304186 | MS.gene49627:CDS | 50.0% | |
| TGCGTCACAGTATTCCTCCA+CGG | - | chr5.1:28303329-28303348 | None:intergenic | 50.0% | |
| TTCGTGTGAAGCTGAAGACG+AGG | + | chr5.1:28303267-28303286 | MS.gene49627:CDS | 50.0% | |
| TTCTACCTGTGGAAGGGTCA+CGG | - | chr5.1:28302528-28302547 | None:intergenic | 50.0% | |
| ! | AGTGAGTGATGAAGGTGTGC+AGG | + | chr5.1:28304230-28304249 | MS.gene49627:CDS | 50.0% |
| ! | GTGAGTGATGAAGGTGTGCA+GGG | + | chr5.1:28304231-28304250 | MS.gene49627:CDS | 50.0% |
| ! | TTGGGGGTTAGGTAGCTCTA+TGG | + | chr5.1:28303856-28303875 | MS.gene49627:intron | 50.0% |
| !!! | CGAGAGGAAGTTTTCAGGTG+CGG | + | chr5.1:28298272-28298291 | MS.gene49627:intron | 50.0% |
| !!! | GACGGACTGCTTTTGCTTTG+TGG | - | chr5.1:28302980-28302999 | None:intergenic | 50.0% |
| AGCTGAGGAGTTGTTGTGGG+AGG | + | chr5.1:28298035-28298054 | MS.gene49627:CDS | 55.0% | |
| AGGCAATTGCGTGGGTGAAG+CGG | - | chr5.1:28302610-28302629 | None:intergenic | 55.0% | |
| ATTCGCCCCTCCATCTTCCT+AGG | - | chr5.1:28304177-28304196 | None:intergenic | 55.0% | |
| CGAAGAAACTCCCCCACACA+AGG | - | chr5.1:28299585-28299604 | None:intergenic | 55.0% | |
| CGGTTGTGGTGTGAGGCAAA+CGG | - | chr5.1:28301967-28301986 | None:intergenic | 55.0% | |
| CGTTGTTGTCGTCGGCGATA+AGG | - | chr5.1:28297772-28297791 | None:intergenic | 55.0% | |
| CTAGGAGGATTCACCACAGC+AGG | - | chr5.1:28303470-28303489 | None:intergenic | 55.0% | |
| GCACATTGCACGCGTCAACT+AGG | + | chr5.1:28298457-28298476 | MS.gene49627:intron | 55.0% | |
| GGAGGAAGCTGCAAACGAAG+AGG | - | chr5.1:28304375-28304394 | None:intergenic | 55.0% | |
| GGATTCACCACAGCAGGAGA+AGG | - | chr5.1:28303464-28303483 | None:intergenic | 55.0% | |
| GGTGAAAGGAGGCAATTGCG+TGG | - | chr5.1:28302619-28302638 | None:intergenic | 55.0% | |
| GTCACAGTATTCCTCCACGG+TGG | - | chr5.1:28303326-28303345 | None:intergenic | 55.0% | |
| GTTACACTGTTCCTCCACGG+CGG | - | chr5.1:28298085-28298104 | None:intergenic | 55.0% | |
| TAGCATGCCTTCTCCTGCTG+TGG | + | chr5.1:28303454-28303473 | MS.gene49627:CDS | 55.0% | |
| TGAAAACTTCCTCTCGCCGG+CGG | - | chr5.1:28298268-28298287 | None:intergenic | 55.0% | |
| TGTGTCGTCGTGAGTGAGGA+AGG | - | chr5.1:28302551-28302570 | None:intergenic | 55.0% | |
| ! | ACGGGTTTCAGGTGAAGCTG+AGG | + | chr5.1:28298020-28298039 | MS.gene49627:CDS | 55.0% |
| ! | TGGCTCCGTTTCGGCTTTGT+CGG | - | chr5.1:28297802-28297821 | None:intergenic | 55.0% |
| ! | TGTCGTGGTGGCTTCTGAGA+CGG | - | chr5.1:28302998-28303017 | None:intergenic | 55.0% |
| !! | GCCAATACGTGACGGGTTTC+AGG | + | chr5.1:28298009-28298028 | MS.gene49627:CDS | 55.0% |
| GAAACGGCAGTAATCCGCCG+TGG | + | chr5.1:28298068-28298087 | MS.gene49627:CDS | 60.0% | |
| GGCAATTGCGTGGGTGAAGC+GGG | - | chr5.1:28302609-28302628 | None:intergenic | 60.0% | |
| TGCGTGTGTCGTCGTGAGTG+AGG | - | chr5.1:28302555-28302574 | None:intergenic | 60.0% | |
| ! | GCCGGCGAGAGGAAGTTTTC+AGG | + | chr5.1:28298267-28298286 | MS.gene49627:CDS | 60.0% |
| ACGGCAGTAATCCGCCGTGG+AGG | + | chr5.1:28298071-28298090 | MS.gene49627:CDS | 65.0% | |
| !! | ATGGTGGGTTGCCACCGTGG+AGG | + | chr5.1:28303312-28303331 | MS.gene49627:CDS | 65.0% |
| !! | GGAATGGTGGGTTGCCACCG+TGG | + | chr5.1:28303309-28303328 | MS.gene49627:CDS | 65.0% |
| CTCACTTGGGTCGTCGCCGC+CGG | + | chr5.1:28298249-28298268 | MS.gene49627:CDS | 70.0% | |
| ! | GGGTCGTCGCCGCCGGCGAG+AGG | + | chr5.1:28298256-28298275 | MS.gene49627:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 28297713 | 28304446 | 28297713 | ID=MS.gene49627 |
| chr5.1 | mRNA | 28297713 | 28304446 | 28297713 | ID=MS.gene49627.t1;Parent=MS.gene49627 |
| chr5.1 | exon | 28297713 | 28298288 | 28297713 | ID=MS.gene49627.t1.exon1;Parent=MS.gene49627.t1 |
| chr5.1 | CDS | 28297713 | 28298288 | 28297713 | ID=cds.MS.gene49627.t1;Parent=MS.gene49627.t1 |
| chr5.1 | exon | 28302936 | 28303517 | 28302936 | ID=MS.gene49627.t1.exon2;Parent=MS.gene49627.t1 |
| chr5.1 | CDS | 28302936 | 28303517 | 28302936 | ID=cds.MS.gene49627.t1;Parent=MS.gene49627.t1 |
| chr5.1 | exon | 28304156 | 28304446 | 28304156 | ID=MS.gene49627.t1.exon3;Parent=MS.gene49627.t1 |
| chr5.1 | CDS | 28304156 | 28304446 | 28304156 | ID=cds.MS.gene49627.t1;Parent=MS.gene49627.t1 |
| Gene Sequence |
| Protein sequence |
