Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52226.t1 | XP_003623908.2 | 96.5 | 1013 | 35 | 0 | 1 | 1013 | 1 | 1013 | 0.00E+00 | 1916 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52226.t1 | Q9M2R0 | 58.5 | 788 | 296 | 8 | 235 | 1013 | 8 | 773 | 9.4e-269 | 927.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52226.t1 | G7L3K6 | 96.5 | 1013 | 35 | 0 | 1 | 1013 | 1 | 1013 | 0.0e+00 | 1916.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049259 | MS.gene52226 | 0.819385 | 1.19E-52 | -1.69E-46 |
| MS.gene049281 | MS.gene52226 | 0.801464 | 8.89E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene52226 | -0.80088 | 1.17E-48 | -1.69E-46 |
| MS.gene05015 | MS.gene52226 | 0.821509 | 3.89E-53 | -1.69E-46 |
| MS.gene050173 | MS.gene52226 | 0.868859 | 4.77E-66 | -1.69E-46 |
| MS.gene050363 | MS.gene52226 | 0.811367 | 7.25E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene52226 | -0.832166 | 1.10E-55 | -1.69E-46 |
| MS.gene050961 | MS.gene52226 | 0.809665 | 1.69E-50 | -1.69E-46 |
| MS.gene051044 | MS.gene52226 | 0.820927 | 5.29E-53 | -1.69E-46 |
| MS.gene051127 | MS.gene52226 | 0.815742 | 7.91E-52 | -1.69E-46 |
| MS.gene051138 | MS.gene52226 | 0.838066 | 3.59E-57 | -1.69E-46 |
| MS.gene052053 | MS.gene52226 | 0.809146 | 2.19E-50 | -1.69E-46 |
| MS.gene052084 | MS.gene52226 | 0.800263 | 1.56E-48 | -1.69E-46 |
| MS.gene053488 | MS.gene52226 | 0.810827 | 9.50E-51 | -1.69E-46 |
| MS.gene053561 | MS.gene52226 | 0.865581 | 5.32E-65 | -1.69E-46 |
| MS.gene054056 | MS.gene52226 | 0.841048 | 6.02E-58 | -1.69E-46 |
| MS.gene054626 | MS.gene52226 | 0.801059 | 1.08E-48 | -1.69E-46 |
| MS.gene055154 | MS.gene52226 | 0.80224 | 6.16E-49 | -1.69E-46 |
| MS.gene055549 | MS.gene52226 | 0.838743 | 2.40E-57 | -1.69E-46 |
| MS.gene055550 | MS.gene52226 | 0.837683 | 4.50E-57 | -1.69E-46 |
| MS.gene055776 | MS.gene52226 | -0.805253 | 1.46E-49 | -1.69E-46 |
| MS.gene055942 | MS.gene52226 | 0.849185 | 3.80E-60 | -1.69E-46 |
| MS.gene056185 | MS.gene52226 | 0.836948 | 6.94E-57 | -1.69E-46 |
| MS.gene056761 | MS.gene52226 | 0.837874 | 4.02E-57 | -1.69E-46 |
| MS.gene057014 | MS.gene52226 | 0.810563 | 1.08E-50 | -1.69E-46 |
| MS.gene057226 | MS.gene52226 | 0.801305 | 9.59E-49 | -1.69E-46 |
| MS.gene058349 | MS.gene52226 | 0.807176 | 5.74E-50 | -1.69E-46 |
| MS.gene058493 | MS.gene52226 | 0.806255 | 8.99E-50 | -1.69E-46 |
| MS.gene058628 | MS.gene52226 | 0.837668 | 4.54E-57 | -1.69E-46 |
| MS.gene058629 | MS.gene52226 | 0.81223 | 4.71E-51 | -1.69E-46 |
| MS.gene058630 | MS.gene52226 | 0.821258 | 4.44E-53 | -1.69E-46 |
| MS.gene05884 | MS.gene52226 | 0.80253 | 5.37E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene52226 | -0.827171 | 1.81E-54 | -1.69E-46 |
| MS.gene059428 | MS.gene52226 | 0.805675 | 1.19E-49 | -1.69E-46 |
| MS.gene059690 | MS.gene52226 | 0.87945 | 1.23E-69 | -1.69E-46 |
| MS.gene059691 | MS.gene52226 | 0.844381 | 7.83E-59 | -1.69E-46 |
| MS.gene059694 | MS.gene52226 | 0.871521 | 6.42E-67 | -1.69E-46 |
| MS.gene059697 | MS.gene52226 | 0.854842 | 9.40E-62 | -1.69E-46 |
| MS.gene059865 | MS.gene52226 | -0.802567 | 5.28E-49 | -1.69E-46 |
| MS.gene06012 | MS.gene52226 | 0.832005 | 1.21E-55 | -1.69E-46 |
| MS.gene060337 | MS.gene52226 | 0.80582 | 1.11E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52226.t1 | MTR_7g076900 | 96.644 | 1013 | 34 | 0 | 1 | 1013 | 1 | 1013 | 0.0 | 2044 |
| MS.gene52226.t1 | MTR_8g031270 | 65.531 | 1027 | 316 | 15 | 1 | 1013 | 1 | 1003 | 0.0 | 1347 |
| MS.gene52226.t1 | MTR_5g010390 | 60.794 | 1033 | 359 | 13 | 1 | 1013 | 1 | 1007 | 0.0 | 1243 |
| MS.gene52226.t1 | MTR_7g092770 | 60.076 | 789 | 284 | 10 | 235 | 1013 | 8 | 775 | 0.0 | 971 |
| MS.gene52226.t1 | MTR_4g066150 | 59.873 | 785 | 286 | 7 | 235 | 1013 | 9 | 770 | 0.0 | 959 |
| MS.gene52226.t1 | MTR_0305s0020 | 59.391 | 788 | 290 | 9 | 235 | 1013 | 8 | 774 | 0.0 | 950 |
| MS.gene52226.t1 | MTR_0291s0010 | 57.591 | 797 | 307 | 9 | 235 | 1013 | 14 | 797 | 0.0 | 944 |
| MS.gene52226.t1 | MTR_3g027150 | 56.750 | 800 | 313 | 9 | 235 | 1013 | 35 | 822 | 0.0 | 938 |
| MS.gene52226.t1 | MTR_4g023460 | 55.975 | 795 | 323 | 9 | 235 | 1013 | 359 | 1142 | 0.0 | 920 |
| MS.gene52226.t1 | MTR_4g023460 | 40.288 | 139 | 82 | 1 | 4 | 141 | 1 | 139 | 6.43e-23 | 106 |
| MS.gene52226.t1 | MTR_4g033215 | 55.076 | 788 | 326 | 11 | 235 | 1013 | 276 | 1044 | 0.0 | 885 |
| MS.gene52226.t1 | MTR_4g033215 | 37.879 | 132 | 73 | 3 | 5 | 133 | 3 | 128 | 1.01e-15 | 82.8 |
| MS.gene52226.t1 | MTR_4g057675 | 47.875 | 800 | 364 | 12 | 235 | 1013 | 16 | 783 | 0.0 | 721 |
| MS.gene52226.t1 | MTR_4g107850 | 48.512 | 773 | 335 | 17 | 267 | 1013 | 303 | 1038 | 0.0 | 712 |
| MS.gene52226.t1 | MTR_4g107850 | 42.969 | 128 | 69 | 2 | 5 | 128 | 18 | 145 | 6.11e-23 | 106 |
| MS.gene52226.t1 | MTR_4g071870 | 45.500 | 800 | 349 | 13 | 235 | 1013 | 16 | 749 | 0.0 | 681 |
| MS.gene52226.t1 | MTR_6g028050 | 45.408 | 773 | 368 | 13 | 265 | 1013 | 284 | 1026 | 0.0 | 679 |
| MS.gene52226.t1 | MTR_6g028050 | 34.884 | 129 | 82 | 1 | 5 | 131 | 6 | 134 | 1.50e-18 | 92.0 |
| MS.gene52226.t1 | MTR_1g015540 | 41.482 | 769 | 393 | 15 | 267 | 1007 | 28 | 767 | 0.0 | 565 |
| MS.gene52226.t1 | MTR_5g096980 | 36.352 | 795 | 462 | 12 | 230 | 1013 | 2 | 763 | 1.14e-169 | 516 |
| MS.gene52226.t1 | MTR_4g023250 | 54.615 | 130 | 57 | 1 | 883 | 1012 | 1 | 128 | 1.67e-42 | 151 |
| MS.gene52226.t1 | MTR_6g027540 | 42.308 | 130 | 70 | 3 | 1 | 127 | 7 | 134 | 3.46e-24 | 110 |
| MS.gene52226.t1 | MTR_4g023230 | 41.803 | 122 | 56 | 1 | 800 | 921 | 49 | 155 | 1.09e-23 | 99.0 |
| MS.gene52226.t1 | MTR_6g028070 | 34.043 | 141 | 90 | 2 | 5 | 142 | 6 | 146 | 1.75e-20 | 91.3 |
| MS.gene52226.t1 | MTR_4g023390 | 36.893 | 103 | 43 | 1 | 887 | 989 | 17 | 97 | 2.17e-16 | 75.9 |
| MS.gene52226.t1 | MTR_4g023240 | 50.877 | 57 | 28 | 0 | 737 | 793 | 13 | 69 | 6.48e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52226.t1 | AT4G11610 | 57.905 | 1031 | 390 | 11 | 1 | 1013 | 3 | 1007 | 0.0 | 1199 |
| MS.gene52226.t1 | AT4G11610 | 57.874 | 1035 | 388 | 12 | 1 | 1013 | 3 | 1011 | 0.0 | 1197 |
| MS.gene52226.t1 | AT4G00700 | 55.470 | 1033 | 413 | 12 | 1 | 1013 | 1 | 1006 | 0.0 | 1103 |
| MS.gene52226.t1 | AT4G00700 | 55.470 | 1033 | 413 | 12 | 1 | 1013 | 1 | 1006 | 0.0 | 1103 |
| MS.gene52226.t1 | AT4G11610 | 58.960 | 865 | 311 | 10 | 180 | 1013 | 23 | 874 | 0.0 | 1035 |
| MS.gene52226.t1 | AT3G61300 | 50.762 | 1050 | 401 | 22 | 1 | 1013 | 2 | 972 | 0.0 | 1008 |
| MS.gene52226.t1 | AT3G57880 | 59.645 | 788 | 287 | 8 | 235 | 1013 | 8 | 773 | 0.0 | 976 |
| MS.gene52226.t1 | AT3G57880 | 59.645 | 788 | 287 | 8 | 235 | 1013 | 8 | 773 | 0.0 | 976 |
| MS.gene52226.t1 | AT3G57880 | 59.645 | 788 | 287 | 8 | 235 | 1013 | 8 | 773 | 0.0 | 976 |
| MS.gene52226.t1 | AT3G57880 | 59.645 | 788 | 287 | 8 | 235 | 1013 | 8 | 773 | 0.0 | 976 |
| MS.gene52226.t1 | AT1G22610 | 48.282 | 1048 | 482 | 18 | 5 | 1013 | 3 | 1029 | 0.0 | 966 |
| MS.gene52226.t1 | AT1G51570 | 59.114 | 790 | 291 | 10 | 235 | 1013 | 8 | 776 | 0.0 | 962 |
| MS.gene52226.t1 | AT5G48060 | 48.057 | 1055 | 484 | 18 | 2 | 1013 | 3 | 1036 | 0.0 | 962 |
| MS.gene52226.t1 | AT5G06850 | 57.928 | 801 | 307 | 10 | 230 | 1013 | 7 | 794 | 0.0 | 956 |
| MS.gene52226.t1 | AT5G12970 | 57.506 | 786 | 304 | 9 | 234 | 1013 | 8 | 769 | 0.0 | 933 |
| MS.gene52226.t1 | AT1G04150 | 44.808 | 1040 | 504 | 20 | 5 | 1013 | 12 | 1012 | 0.0 | 854 |
| MS.gene52226.t1 | AT4G20080 | 48.734 | 790 | 363 | 12 | 236 | 1013 | 15 | 774 | 0.0 | 734 |
| MS.gene52226.t1 | AT1G74720 | 45.679 | 810 | 378 | 17 | 235 | 1013 | 303 | 1081 | 0.0 | 705 |
| MS.gene52226.t1 | AT1G74720 | 39.844 | 128 | 73 | 2 | 5 | 128 | 18 | 145 | 1.01e-21 | 102 |
| MS.gene52226.t1 | AT3G03680 | 46.461 | 777 | 353 | 15 | 267 | 1013 | 274 | 1017 | 0.0 | 687 |
| MS.gene52226.t1 | AT3G03680 | 35.938 | 128 | 82 | 0 | 5 | 132 | 8 | 135 | 5.13e-21 | 100 |
| MS.gene52226.t1 | AT5G17980 | 45.111 | 767 | 372 | 13 | 265 | 1013 | 314 | 1049 | 0.0 | 673 |
| MS.gene52226.t1 | AT5G17980 | 38.519 | 135 | 79 | 3 | 2 | 132 | 3 | 137 | 1.55e-18 | 92.0 |
| MS.gene52226.t1 | AT3G61720 | 35.386 | 828 | 457 | 25 | 230 | 1013 | 2 | 795 | 1.48e-138 | 436 |
| MS.gene52226.t1 | AT5G03435 | 36.802 | 788 | 437 | 24 | 230 | 1006 | 2 | 739 | 2.05e-136 | 428 |
| MS.gene52226.t1 | AT5G03435 | 38.540 | 589 | 323 | 16 | 230 | 813 | 2 | 556 | 5.62e-113 | 360 |
| MS.gene52226.t1 | AT5G44760 | 41.262 | 412 | 186 | 11 | 235 | 642 | 5 | 364 | 6.32e-87 | 288 |
| MS.gene52226.t1 | AT1G03370 | 36.066 | 122 | 75 | 2 | 276 | 396 | 3 | 122 | 5.81e-12 | 70.5 |
| MS.gene52226.t1 | AT1G03370 | 36.066 | 122 | 75 | 2 | 276 | 396 | 3 | 122 | 6.88e-12 | 70.1 |
Find 231 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCTTACCAAGGGGAATTT+TGG | 0.176984 | 7.4:+28812021 | None:intergenic |
| CCCTCTGCCATCTCTAGTTT+TGG | 0.219773 | 7.4:+28810410 | None:intergenic |
| AGTACTGCTCATGGAATTTC+GGG | 0.226667 | 7.4:+28810313 | None:intergenic |
| TAGTACTGCTCATGGAATTT+CGG | 0.258158 | 7.4:+28810312 | None:intergenic |
| TCCTTTCCATCATTTGATTT+AGG | 0.263820 | 7.4:+28811689 | None:intergenic |
| TTTCTCTACATGTTCATAAT+AGG | 0.301067 | 7.4:-28809685 | MS.gene52226:CDS |
| CTTATTATAGCAGTGATCTT+AGG | 0.305172 | 7.4:-28810509 | MS.gene52226:CDS |
| CTTTGGCTCCTCAGTGGTAT+AGG | 0.321694 | 7.4:-28811157 | MS.gene52226:CDS |
| TTAGCTGAAAAGCTTTCATT+AGG | 0.344624 | 7.4:+28811020 | None:intergenic |
| TTGTTGTCACTTCAAGGTTC+CGG | 0.365281 | 7.4:-28810132 | MS.gene52226:CDS |
| GTACGATCGGTTGAGAAGTT+TGG | 0.368587 | 7.4:-28809518 | MS.gene52226:CDS |
| GGCTACATGCACTACTAAAC+TGG | 0.371233 | 7.4:-28809447 | MS.gene52226:CDS |
| CTTGGTAAGGTTAGGCTCAC+TGG | 0.376204 | 7.4:-28812010 | MS.gene52226:CDS |
| AAAGTTGTTAAAGCGTTTGC+AGG | 0.380763 | 7.4:-28811608 | MS.gene52226:CDS |
| TGAAGAACCTTTGATCATTA+CGG | 0.381357 | 7.4:-28810769 | MS.gene52226:CDS |
| GCAAACGCTTTAACAACTTT+CGG | 0.382851 | 7.4:+28811611 | None:intergenic |
| AACCTTCTGAAGAAATTAAC+TGG | 0.383999 | 7.4:+28809277 | None:intergenic |
| AGATGACCCCTCTCCATCTT+TGG | 0.384414 | 7.4:+28812216 | None:intergenic |
| CTGATACAGACTCTCATCTA+TGG | 0.384863 | 7.4:-28809885 | MS.gene52226:CDS |
| TCATAATAGGTCTGTGGAAA+TGG | 0.386039 | 7.4:-28809672 | MS.gene52226:CDS |
| GTATAGGATTGTGAACAAAA+AGG | 0.386173 | 7.4:-28811141 | MS.gene52226:CDS |
| CCAAGTTCCAATACACCAAT+TGG | 0.387585 | 7.4:+28810459 | None:intergenic |
| CTTGGAGGTGGAAAAGTTGT+TGG | 0.391594 | 7.4:-28811536 | MS.gene52226:CDS |
| GAAGATAAGGATGAGACTAT+TGG | 0.393538 | 7.4:-28810744 | MS.gene52226:CDS |
| AATTCCATGAGCAGTACTAT+TGG | 0.396807 | 7.4:-28810308 | MS.gene52226:CDS |
| CAGTTAGTGTTTCTTTCAGC+TGG | 0.396812 | 7.4:-28809349 | MS.gene52226:CDS |
| TGAGGAGCCAAAGGACTATC+AGG | 0.397324 | 7.4:+28811167 | None:intergenic |
| TATCCATTGTTGTCACTTCA+AGG | 0.399474 | 7.4:-28810138 | MS.gene52226:CDS |
| GAAGAAACCAATTGGTGTAT+TGG | 0.400266 | 7.4:-28810466 | MS.gene52226:CDS |
| GGCCTACTGCAAGACAACTA+TGG | 0.401911 | 7.4:-28810488 | MS.gene52226:CDS |
| AAGGGCGAAATGATGAATAA+TGG | 0.404674 | 7.4:-28811122 | MS.gene52226:CDS |
| TGTATTCATGAATCCATTGT+TGG | 0.406552 | 7.4:+28811823 | None:intergenic |
| GTATACTGTGTGGCAAAATA+TGG | 0.406960 | 7.4:-28810378 | MS.gene52226:CDS |
| TCGTGCAACATATATATTCA+TGG | 0.410915 | 7.4:-28809416 | MS.gene52226:CDS |
| AAGCTATGTGTTGAAGTTGT+TGG | 0.413644 | 7.4:-28812256 | MS.gene52226:CDS |
| CCAATTGGTGTATTGGAACT+TGG | 0.413942 | 7.4:-28810459 | MS.gene52226:CDS |
| CCGGTATTTGATCTTGTGTA+AGG | 0.415025 | 7.4:+28811792 | None:intergenic |
| AACTCCTCGTCGAATTCGTC+TGG | 0.417386 | 7.4:+28809586 | None:intergenic |
| CAGCTAACTATGCTCAAATT+CGG | 0.417883 | 7.4:-28811004 | MS.gene52226:CDS |
| TAATGAGGCACCCTAAGTTA+AGG | 0.420069 | 7.4:-28809318 | MS.gene52226:CDS |
| GCAAACACCAGGTTCCATTC+AGG | 0.423012 | 7.4:+28811314 | None:intergenic |
| ATGAATCCATTGTTGGCAAA+AGG | 0.427118 | 7.4:+28811830 | None:intergenic |
| GGTAACTTACCCCTTAACTT+AGG | 0.430256 | 7.4:+28809307 | None:intergenic |
| TTGAGGTTTGATAACTTGCT+TGG | 0.431039 | 7.4:+28812085 | None:intergenic |
| GGGATGCATGAGATGAAATC+TGG | 0.439554 | 7.4:-28811644 | MS.gene52226:CDS |
| TTCATGTGAGGAGGGTTCCT+CGG | 0.439843 | 7.4:+28809640 | None:intergenic |
| CCTCTCCATCTTTGGCTACA+AGG | 0.441254 | 7.4:+28812224 | None:intergenic |
| CGTTCCGCCTGATAGTCCTT+TGG | 0.442986 | 7.4:-28811174 | MS.gene52226:CDS |
| ATTCCATGAGCAGTACTATT+GGG | 0.445227 | 7.4:-28810307 | MS.gene52226:CDS |
| TTTGTTATAGTGGTTTATGC+AGG | 0.446499 | 7.4:+28812054 | None:intergenic |
| AGTTGCTTGTTGATTCTCCT+TGG | 0.447197 | 7.4:+28811286 | None:intergenic |
| GTGCGAACGCGAACGATTGT+TGG | 0.448233 | 7.4:-28810345 | MS.gene52226:CDS |
| GTTGAGAAGTTTGGCGGGGA+GGG | 0.449702 | 7.4:-28809509 | MS.gene52226:CDS |
| GCAAAAGGTTCTTGCATAGC+AGG | 0.449962 | 7.4:+28811845 | None:intergenic |
| AAAGAGACAAGTCCTTCTCT+TGG | 0.453009 | 7.4:-28811554 | MS.gene52226:CDS |
| CATTGGCTCTACAAGGTCAT+AGG | 0.454666 | 7.4:+28811472 | None:intergenic |
| AGGCTCTCAACGTTGGAAAC+CGG | 0.454788 | 7.4:-28810180 | MS.gene52226:CDS |
| AATGAGGCACCCTAAGTTAA+GGG | 0.455278 | 7.4:-28809317 | MS.gene52226:CDS |
| GAATCGGAATGCCAAGCATC+AGG | 0.455390 | 7.4:+28811050 | None:intergenic |
| TGCTTCCATTGCTGATGACA+TGG | 0.456302 | 7.4:+28810638 | None:intergenic |
| TCTACACTTCTCCAAGGTTA+TGG | 0.457109 | 7.4:-28810974 | MS.gene52226:CDS |
| CTATCAGGCGGAACGCGCTT+AGG | 0.457184 | 7.4:+28811182 | None:intergenic |
| GATGACATGGACTTAGCAAT+AGG | 0.463113 | 7.4:+28810651 | None:intergenic |
| CATAGCAGGAAGAGGGTTTG+AGG | 0.463162 | 7.4:+28811859 | None:intergenic |
| GAGAGATAATGCTTGCTGTC+TGG | 0.465444 | 7.4:-28811100 | MS.gene52226:CDS |
| TGGCAAAATATGGTCACAAA+TGG | 0.466882 | 7.4:-28810368 | MS.gene52226:CDS |
| CTGAAGAAATTAACTGGTGC+AGG | 0.467233 | 7.4:+28809283 | None:intergenic |
| TTATTGATTCTTGATTGAAC+CGG | 0.472784 | 7.4:+28810837 | None:intergenic |
| GAAAGGTGAACTTGGTTTGA+AGG | 0.474082 | 7.4:-28811912 | MS.gene52226:CDS |
| CACCAGTTAATTTCTTCAGA+AGG | 0.474402 | 7.4:-28809279 | MS.gene52226:CDS |
| CTTGAACAATGATCATTGCT+TGG | 0.475171 | 7.4:+28809962 | None:intergenic |
| AGGAGCTCTAGACTTGTTGT+CGG | 0.476042 | 7.4:+28810908 | None:intergenic |
| AAGAAATCAAATGTAACAGT+TGG | 0.476726 | 7.4:-28811665 | MS.gene52226:CDS |
| ATGATCAAAGGTTCTTCAAA+GGG | 0.476920 | 7.4:+28810774 | None:intergenic |
| GGGTTTGAGGCTCTTAAAGA+AGG | 0.479470 | 7.4:+28811872 | None:intergenic |
| CAACTATGGAAGAAACCAAT+TGG | 0.480210 | 7.4:-28810474 | MS.gene52226:CDS |
| CATGACCTTGTAGCCAAAGA+TGG | 0.481395 | 7.4:-28812229 | MS.gene52226:CDS |
| GTAACTTACCCCTTAACTTA+GGG | 0.481734 | 7.4:+28809308 | None:intergenic |
| GATCATTACGGTCGAAGATA+AGG | 0.482378 | 7.4:-28810757 | MS.gene52226:CDS |
| AACCTTCCTAAATCAAATGA+TGG | 0.483406 | 7.4:-28811695 | MS.gene52226:CDS |
| AATGATCAAAGGTTCTTCAA+AGG | 0.484883 | 7.4:+28810773 | None:intergenic |
| TCATGTGAGGAGGGTTCCTC+GGG | 0.486658 | 7.4:+28809641 | None:intergenic |
| TTCCATCATTTGATTTAGGA+AGG | 0.487025 | 7.4:+28811693 | None:intergenic |
| AGGTTCCGGTCTCAAGAAGA+TGG | 0.489050 | 7.4:-28810118 | MS.gene52226:CDS |
| AGAAATCAAATGTAACAGTT+GGG | 0.494255 | 7.4:-28811664 | MS.gene52226:CDS |
| GATCGGTTGAGAAGTTTGGC+GGG | 0.494416 | 7.4:-28809514 | MS.gene52226:CDS |
| ATTCAAAGATCGGTAAGGTT+CGG | 0.494918 | 7.4:-28810206 | MS.gene52226:CDS |
| CACTATCCTCTTGAAAAGAA+AGG | 0.496018 | 7.4:-28811950 | MS.gene52226:CDS |
| CCATCCACAGTTCTCACCCT+TGG | 0.499776 | 7.4:-28810273 | MS.gene52226:CDS |
| AATAACCCGCGGTGGGATCA+AGG | 0.499845 | 7.4:-28810819 | MS.gene52226:CDS |
| GGGAGGGTTCAAAGTGTTGT+TGG | 0.500234 | 7.4:-28809493 | MS.gene52226:CDS |
| GACTAATATCAGTTGGAAGT+TGG | 0.501455 | 7.4:-28809810 | MS.gene52226:CDS |
| TTATGCAGGCTTCAAGATTG+AGG | 0.502099 | 7.4:+28812068 | None:intergenic |
| AACCACTATAACAAAATCAA+TGG | 0.503628 | 7.4:-28812046 | MS.gene52226:CDS |
| CCAACCACTTCCTTTCTAAG+AGG | 0.503708 | 7.4:+28809916 | None:intergenic |
| ACCTCCAACGAACTATATCC+TGG | 0.504525 | 7.4:+28809539 | None:intergenic |
| GCTAATCATGTTGGTCATTG+AGG | 0.505272 | 7.4:+28810062 | None:intergenic |
| TTCCATAGTTGTCTTGCAGT+AGG | 0.505385 | 7.4:+28810486 | None:intergenic |
| ATTTGATTTGTAAATGAAGC+CGG | 0.505535 | 7.4:+28811767 | None:intergenic |
| GAAATACAAGCTAATCATGT+TGG | 0.505680 | 7.4:+28810053 | None:intergenic |
| TTCTCGGGACTAATATCAGT+TGG | 0.508468 | 7.4:-28809817 | MS.gene52226:CDS |
| GACAGCAATGATTCAAAGAT+CGG | 0.511959 | 7.4:-28810216 | MS.gene52226:CDS |
| CTCCAAAATTCCCCTTGGTA+AGG | 0.512649 | 7.4:-28812023 | MS.gene52226:CDS |
| ACCACTTCCTTTCTAAGAGG+TGG | 0.513489 | 7.4:+28809919 | None:intergenic |
| CTACCGGTCAAATCCATCCT+TGG | 0.514752 | 7.4:+28811410 | None:intergenic |
| TTCATTAGGAGACATTGAAT+CGG | 0.515726 | 7.4:+28811034 | None:intergenic |
| AGATCGGTAAGGTTCGGATA+AGG | 0.517166 | 7.4:-28810200 | MS.gene52226:CDS |
| GAGACAAGTCCTTCTCTTGG+AGG | 0.520528 | 7.4:-28811551 | MS.gene52226:CDS |
| AACAGAACCACCTCTTAGAA+AGG | 0.520564 | 7.4:-28809926 | MS.gene52226:CDS |
| TCGCGTACGAAAGGTGAACT+TGG | 0.520706 | 7.4:-28811920 | MS.gene52226:CDS |
| TCCTAAATCAAATGATGGAA+AGG | 0.526025 | 7.4:-28811690 | MS.gene52226:CDS |
| CAGCAATGGAAGCAGAAGAA+AGG | 0.526831 | 7.4:-28810629 | MS.gene52226:CDS |
| CCCTATGTGATTGTCAAGGT+TGG | 0.530224 | 7.4:-28811380 | MS.gene52226:CDS |
| ATGACCGAAAAGTCCGTAGC+AGG | 0.531037 | 7.4:-28810680 | MS.gene52226:CDS |
| CCTGGTGTTTGCATTTGCCA+AGG | 0.532995 | 7.4:-28811303 | MS.gene52226:CDS |
| TGCACCTTAACAAAAGCATC+AGG | 0.533744 | 7.4:+28810888 | None:intergenic |
| ACAAGTCCTTCTCTTGGAGG+TGG | 0.534319 | 7.4:-28811548 | MS.gene52226:CDS |
| CTTCCCAATAGTACTGCTCA+TGG | 0.535267 | 7.4:+28810304 | None:intergenic |
| GTCAAGGTTGGAAACTTCAA+AGG | 0.536079 | 7.4:-28811368 | MS.gene52226:CDS |
| TGACAATCACATAGGGATCA+AGG | 0.536090 | 7.4:+28811387 | None:intergenic |
| CAATAGTCCTGAATGGAACC+TGG | 0.539153 | 7.4:-28811321 | MS.gene52226:CDS |
| ATTATGTGTGTAAATGCGAC+CGG | 0.541632 | 7.4:+28810161 | None:intergenic |
| TGAAAGCTCGCGATCTTCCA+AGG | 0.541778 | 7.4:-28811427 | MS.gene52226:CDS |
| ATCATTGTTCAAGCTAGACT+TGG | 0.542712 | 7.4:-28809952 | MS.gene52226:CDS |
| CTCACCCATCTTCTTGAGAC+CGG | 0.543382 | 7.4:+28810113 | None:intergenic |
| GATAGTCCATTGGCTCTACA+AGG | 0.543462 | 7.4:+28811465 | None:intergenic |
| TTTGTAAATGAAGCCGGTAC+CGG | 0.545303 | 7.4:+28811773 | None:intergenic |
| GGTTGAGAAGTTTGGCGGGG+AGG | 0.547350 | 7.4:-28809510 | MS.gene52226:CDS |
| CCGAGAAAACTTCTTTCAGA+CGG | 0.547540 | 7.4:+28809833 | None:intergenic |
| GGTTCTTGCATAGCAGGAAG+AGG | 0.547681 | 7.4:+28811851 | None:intergenic |
| GCATGGCACACAAGCTGATG+AGG | 0.548751 | 7.4:-28811078 | MS.gene52226:CDS |
| ACAAGATCAAATACCGGTAC+CGG | 0.554521 | 7.4:-28811786 | MS.gene52226:CDS |
| AGCTCGCGATCTTCCAAGGA+TGG | 0.555284 | 7.4:-28811423 | MS.gene52226:CDS |
| CCTTGGCAAATGCAAACACC+AGG | 0.555300 | 7.4:+28811303 | None:intergenic |
| CTATGACCTTGTAGAGCCAA+TGG | 0.559842 | 7.4:-28811471 | MS.gene52226:CDS |
| GGAGGTGGAAAAGTTGTTGG+TGG | 0.562466 | 7.4:-28811533 | MS.gene52226:CDS |
| ACACGTAGGTACCATAACCT+TGG | 0.564633 | 7.4:+28810963 | None:intergenic |
| CGATCGGTTGAGAAGTTTGG+CGG | 0.564903 | 7.4:-28809515 | MS.gene52226:CDS |
| ATTTCCAACGAAGAAAAGCC+AGG | 0.565624 | 7.4:-28809557 | MS.gene52226:CDS |
| CCAACCTTGACAATCACATA+GGG | 0.566308 | 7.4:+28811380 | None:intergenic |
| AAATTCCCCTTGGTAAGGTT+AGG | 0.567383 | 7.4:-28812018 | MS.gene52226:CDS |
| ACCAAAACTAGAGATGGCAG+AGG | 0.567998 | 7.4:-28810411 | MS.gene52226:CDS |
| GGCAAAATATGGTCACAAAT+GGG | 0.568501 | 7.4:-28810367 | MS.gene52226:CDS |
| ACCACCTCTTAGAAAGGAAG+TGG | 0.568632 | 7.4:-28809920 | MS.gene52226:CDS |
| TCTTGTTCAAATATGTTGAG+AGG | 0.571322 | 7.4:+28809997 | None:intergenic |
| TCATTGAGGTACATGAGAAA+CGG | 0.571406 | 7.4:+28810076 | None:intergenic |
| TCTTCGACCGTAATGATCAA+AGG | 0.573056 | 7.4:+28810762 | None:intergenic |
| CCTCTTAGAAAGGAAGTGGT+TGG | 0.573299 | 7.4:-28809916 | MS.gene52226:CDS |
| ATCAGATTGTGGAACAAATG+AGG | 0.573974 | 7.4:+28811985 | None:intergenic |
| GGAGCTCTAGACTTGTTGTC+GGG | 0.575111 | 7.4:+28810909 | None:intergenic |
| CCTACGTGTGAAAGTGATTG+AGG | 0.576001 | 7.4:-28810949 | MS.gene52226:CDS |
| TGGTTGGTAGAATGAGTTGT+GGG | 0.577146 | 7.4:+28809710 | None:intergenic |
| GAAAGAAACACTAACTGTGT+AGG | 0.578375 | 7.4:+28809355 | None:intergenic |
| CACATAGGGATCAAGGCTAC+CGG | 0.578767 | 7.4:+28811394 | None:intergenic |
| CAACCAACCAAAACTAGAGA+TGG | 0.582580 | 7.4:-28810417 | MS.gene52226:CDS |
| GTTCTTGCATAGCAGGAAGA+GGG | 0.584765 | 7.4:+28811852 | None:intergenic |
| CAAGCATCATGTAAAGAATG+TGG | 0.587399 | 7.4:+28809740 | None:intergenic |
| AGGCACAGCAGCGTCTGCAA+TGG | 0.591806 | 7.4:-28811588 | MS.gene52226:CDS |
| CAATGATTCAAAGATCGGTA+AGG | 0.592740 | 7.4:-28810211 | MS.gene52226:CDS |
| AGACTAGTGTTCATGTGAGG+AGG | 0.592743 | 7.4:+28809631 | None:intergenic |
| GCCAGGATATAGTTCGTTGG+AGG | 0.593317 | 7.4:-28809540 | MS.gene52226:CDS |
| CTTCCAAGGATGGATTTGAC+CGG | 0.594960 | 7.4:-28811413 | MS.gene52226:CDS |
| CTATACCACTGAGGAGCCAA+AGG | 0.595709 | 7.4:+28811158 | None:intergenic |
| TTAACAACTTTCGGAGCAGA+CGG | 0.596496 | 7.4:+28811620 | None:intergenic |
| ACAAGGTCATAGGTGCTGCT+AGG | 0.596937 | 7.4:+28811482 | None:intergenic |
| TAATAGGTCTGTGGAAATGG+AGG | 0.597185 | 7.4:-28809669 | MS.gene52226:CDS |
| CCAAGGGTGAGAACTGTGGA+TGG | 0.598337 | 7.4:+28810273 | None:intergenic |
| ACCCTTGGTGTGTTTGACAA+TGG | 0.599825 | 7.4:-28810258 | MS.gene52226:CDS |
| CAATAGGATACCACCTGCTA+CGG | 0.599983 | 7.4:+28810667 | None:intergenic |
| TAGTTCGTTGGAGGTACGAT+CGG | 0.601067 | 7.4:-28809531 | MS.gene52226:CDS |
| ATAATGCTTGCTGTCTGGCA+TGG | 0.601597 | 7.4:-28811095 | MS.gene52226:CDS |
| ATCGGTTGAGAAGTTTGGCG+GGG | 0.602511 | 7.4:-28809513 | MS.gene52226:CDS |
| GACTAGTGTTCATGTGAGGA+GGG | 0.603402 | 7.4:+28809632 | None:intergenic |
| AAAGCCAGGATATAGTTCGT+TGG | 0.603518 | 7.4:-28809543 | MS.gene52226:CDS |
| TCGGATAAGGCTCTCAACGT+TGG | 0.604308 | 7.4:-28810187 | MS.gene52226:CDS |
| CGGTCTCAAGAAGATGGGTG+AGG | 0.604420 | 7.4:-28810112 | MS.gene52226:CDS |
| AATGGCTCCAAAATTCCCCT+TGG | 0.605092 | 7.4:-28812028 | MS.gene52226:CDS |
| GGTTCCGGTCTCAAGAAGAT+GGG | 0.607391 | 7.4:-28810117 | MS.gene52226:CDS |
| TTGGTGGAAGAATTCTTCGC+GGG | 0.607514 | 7.4:-28811517 | MS.gene52226:CDS |
| CTTGTAGCCAAAGATGGAGA+GGG | 0.608148 | 7.4:-28812223 | MS.gene52226:CDS |
| AACATACTATCAGTAAGAGC+AGG | 0.608515 | 7.4:+28809253 | None:intergenic |
| TCCAACCTTGACAATCACAT+AGG | 0.611106 | 7.4:+28811379 | None:intergenic |
| TAGTGCATCTTCGGCAAATG+CGG | 0.611358 | 7.4:+28810027 | None:intergenic |
| TGATCCCTATGTGATTGTCA+AGG | 0.615044 | 7.4:-28811384 | MS.gene52226:CDS |
| GAGTACCTTGATCCCACCGC+GGG | 0.615877 | 7.4:+28810814 | None:intergenic |
| CCTTACACAAGATCAAATAC+CGG | 0.616203 | 7.4:-28811792 | MS.gene52226:CDS |
| AAGAAATTAACTGGTGCAGG+TGG | 0.617761 | 7.4:+28809286 | None:intergenic |
| TAAGTCCATGTCATCAGCAA+TGG | 0.620139 | 7.4:-28810643 | MS.gene52226:CDS |
| AATACAACAGCATCAGATTG+TGG | 0.621953 | 7.4:+28811974 | None:intergenic |
| ATGAGGCACCCTAAGTTAAG+GGG | 0.622924 | 7.4:-28809316 | MS.gene52226:CDS |
| AAGAATCAATAACCCGCGGT+GGG | 0.626084 | 7.4:-28810826 | MS.gene52226:CDS |
| CCAAAACTAGAGATGGCAGA+GGG | 0.627057 | 7.4:-28810410 | MS.gene52226:CDS |
| TGAAGTTGTTGTCAAAGACA+AGG | 0.627319 | 7.4:-28811258 | MS.gene52226:CDS |
| ACATGTTCATAATAGGTCTG+TGG | 0.629103 | 7.4:-28809678 | MS.gene52226:CDS |
| GGAAATGGAGGTTTCGCCCG+AGG | 0.630943 | 7.4:-28809657 | MS.gene52226:CDS |
| CCTTGTAGCCAAAGATGGAG+AGG | 0.631326 | 7.4:-28812224 | MS.gene52226:CDS |
| CGTACGAAAAGATAGTCCAT+TGG | 0.633898 | 7.4:+28811455 | None:intergenic |
| AGGTCATAGGTGCTGCTAGG+AGG | 0.635504 | 7.4:+28811485 | None:intergenic |
| AGTGAGCCTAACCTTACCAA+GGG | 0.636496 | 7.4:+28812012 | None:intergenic |
| ATAGTCCTTTGGCTCCTCAG+TGG | 0.637157 | 7.4:-28811163 | MS.gene52226:CDS |
| ACCGAAAAGTCCGTAGCAGG+TGG | 0.637859 | 7.4:-28810677 | MS.gene52226:CDS |
| CAAGAATCAATAACCCGCGG+TGG | 0.639803 | 7.4:-28810827 | MS.gene52226:CDS |
| GTTGGTGGAAGAATTCTTCG+CGG | 0.640502 | 7.4:-28811518 | MS.gene52226:CDS |
| TACATGCACTACTAAACTGG+AGG | 0.640848 | 7.4:-28809444 | MS.gene52226:CDS |
| ACATAGCAACACAAGGTGAG+AGG | 0.641474 | 7.4:-28809468 | MS.gene52226:CDS |
| CTAAAGTCTACACTTCTCCA+AGG | 0.646588 | 7.4:-28810980 | MS.gene52226:CDS |
| CAGTGAGCCTAACCTTACCA+AGG | 0.651894 | 7.4:+28812011 | None:intergenic |
| TCCATTGTCAAACACACCAA+GGG | 0.658218 | 7.4:+28810257 | None:intergenic |
| TGAGGTACATGAGAAACGGA+TGG | 0.663499 | 7.4:+28810080 | None:intergenic |
| AACATGTAGAGAAACATGGT+TGG | 0.666985 | 7.4:+28809694 | None:intergenic |
| TATGAACATGTAGAGAAACA+TGG | 0.668465 | 7.4:+28809690 | None:intergenic |
| GTCCATTGTCAAACACACCA+AGG | 0.671185 | 7.4:+28810256 | None:intergenic |
| GAACCTTGAAGTGACAACAA+TGG | 0.673421 | 7.4:+28810135 | None:intergenic |
| AAGTTGATTCATCTAGCACA+TGG | 0.673872 | 7.4:+28810529 | None:intergenic |
| GAAAGACTAGTGTTCATGTG+AGG | 0.680761 | 7.4:+28809628 | None:intergenic |
| CACACCAAGGGTGAGAACTG+TGG | 0.681058 | 7.4:+28810269 | None:intergenic |
| GGTTAATAGAAATTTCAACA+TGG | 0.690390 | 7.4:-28809789 | MS.gene52226:CDS |
| TTGTAGCCAAAGATGGAGAG+GGG | 0.694709 | 7.4:-28812222 | MS.gene52226:CDS |
| GGCAGCAGATGTATACTGTG+TGG | 0.698330 | 7.4:-28810388 | MS.gene52226:CDS |
| ACATGCACTACTAAACTGGA+GGG | 0.703227 | 7.4:-28809443 | MS.gene52226:CDS |
| CCTCAATCACTTTCACACGT+AGG | 0.715213 | 7.4:+28810949 | None:intergenic |
| AATCAAGAATCAATAACCCG+CGG | 0.719991 | 7.4:-28810830 | MS.gene52226:CDS |
| GGAGCCAAAGGACTATCAGG+CGG | 0.720600 | 7.4:+28811170 | None:intergenic |
| GTTGGAGACATAGCAACACA+AGG | 0.721365 | 7.4:-28809475 | MS.gene52226:CDS |
| ATGGTTGGTAGAATGAGTTG+TGG | 0.721747 | 7.4:+28809709 | None:intergenic |
| GTGAGCCTAACCTTACCAAG+GGG | 0.732872 | 7.4:+28812013 | None:intergenic |
| CAAAACTAGAGATGGCAGAG+GGG | 0.743897 | 7.4:-28810409 | MS.gene52226:CDS |
| TTCACAATCCTATACCACTG+AGG | 0.748344 | 7.4:+28811149 | None:intergenic |
| AAATCCAGACGAATTCGACG+AGG | 0.759506 | 7.4:-28809590 | MS.gene52226:CDS |
| ATGAATATATATGTTGCACG+AGG | 0.762711 | 7.4:+28809418 | None:intergenic |
| AGAGTACCTTGATCCCACCG+CGG | 0.778093 | 7.4:+28810813 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAATCTCATTCCAATA+TGG | + | chr7.4:28809396-28809415 | None:intergenic | 20.0% |
| ! | AAAAAGATCTTAGTCCATAT+TGG | - | chr7.4:28809379-28809398 | MS.gene52226:CDS | 25.0% |
| ! | AACCACTATAACAAAATCAA+TGG | - | chr7.4:28809471-28809490 | MS.gene52226:CDS | 25.0% |
| ! | AAGAAATCAAATGTAACAGT+TGG | - | chr7.4:28809852-28809871 | MS.gene52226:CDS | 25.0% |
| ! | AGAAATCAAATGTAACAGTT+GGG | - | chr7.4:28809853-28809872 | MS.gene52226:CDS | 25.0% |
| ! | GGTTAATAGAAATTTCAACA+TGG | - | chr7.4:28811728-28811747 | MS.gene52226:CDS | 25.0% |
| ! | TATAGGATTGTGAACAAAAA+GGG | - | chr7.4:28810377-28810396 | MS.gene52226:CDS | 25.0% |
| ! | TGAAAAAGAAAAATGAGTCA+AGG | - | chr7.4:28809787-28809806 | MS.gene52226:CDS | 25.0% |
| ! | TTTCTCTACATGTTCATAAT+AGG | - | chr7.4:28811832-28811851 | MS.gene52226:CDS | 25.0% |
| !! | ACAATACATGATGATTTTGT+TGG | - | chr7.4:28810284-28810303 | MS.gene52226:CDS | 25.0% |
| !!! | ATTGTTTTTCTCAAAGTGAT+TGG | + | chr7.4:28810180-28810199 | None:intergenic | 25.0% |
| !!! | ATTTGATTTGTAAATGAAGC+CGG | + | chr7.4:28809753-28809772 | None:intergenic | 25.0% |
| !!! | TTATTGATTCTTGATTGAAC+CGG | + | chr7.4:28810683-28810702 | None:intergenic | 25.0% |
| AACCTTCCTAAATCAAATGA+TGG | - | chr7.4:28809822-28809841 | MS.gene52226:CDS | 30.0% | |
| AATGATCAAAGGTTCTTCAA+AGG | + | chr7.4:28810747-28810766 | None:intergenic | 30.0% | |
| AGAAAAACAATAGTCCTGAA+TGG | - | chr7.4:28810189-28810208 | MS.gene52226:CDS | 30.0% | |
| ATGAATATATATGTTGCACG+AGG | + | chr7.4:28812102-28812121 | None:intergenic | 30.0% | |
| ATGATCAAAGGTTCTTCAAA+GGG | + | chr7.4:28810746-28810765 | None:intergenic | 30.0% | |
| CATCAAGAAAAACATCGATA+TGG | + | chr7.4:28810961-28810980 | None:intergenic | 30.0% | |
| CTTATTATAGCAGTGATCTT+AGG | - | chr7.4:28811008-28811027 | MS.gene52226:CDS | 30.0% | |
| GAAATACAAGCTAATCATGT+TGG | + | chr7.4:28811467-28811486 | None:intergenic | 30.0% | |
| GTATAGGATTGTGAACAAAA+AGG | - | chr7.4:28810376-28810395 | MS.gene52226:CDS | 30.0% | |
| TATGAACATGTAGAGAAACA+TGG | + | chr7.4:28811830-28811849 | None:intergenic | 30.0% | |
| TCGTGCAACATATATATTCA+TGG | - | chr7.4:28812101-28812120 | MS.gene52226:CDS | 30.0% | |
| TCTTGTTCAAATATGTTGAG+AGG | + | chr7.4:28811523-28811542 | None:intergenic | 30.0% | |
| TGAAGAACCTTTGATCATTA+CGG | - | chr7.4:28810748-28810767 | MS.gene52226:CDS | 30.0% | |
| TGTATTCATGAATCCATTGT+TGG | + | chr7.4:28809697-28809716 | None:intergenic | 30.0% | |
| TTAGCTGAAAAGCTTTCATT+AGG | + | chr7.4:28810500-28810519 | None:intergenic | 30.0% | |
| TTCATTAGGAGACATTGAAT+CGG | + | chr7.4:28810486-28810505 | None:intergenic | 30.0% | |
| ! | AACCTTCTGAAGAAATTAAC+TGG | + | chr7.4:28812243-28812262 | None:intergenic | 30.0% |
| ! | ACATGATGATTTTGTTGGAA+TGG | - | chr7.4:28810289-28810308 | MS.gene52226:CDS | 30.0% |
| ! | CATATCGATGTTTTTCTTGA+TGG | - | chr7.4:28810959-28810978 | MS.gene52226:CDS | 30.0% |
| ! | TCCTAAATCAAATGATGGAA+AGG | - | chr7.4:28809827-28809846 | MS.gene52226:CDS | 30.0% |
| ! | TCCTTTCCATCATTTGATTT+AGG | + | chr7.4:28809831-28809850 | None:intergenic | 30.0% |
| ! | TTCCATCATTTGATTTAGGA+AGG | + | chr7.4:28809827-28809846 | None:intergenic | 30.0% |
| ! | TTTGTTATAGTGGTTTATGC+AGG | + | chr7.4:28809466-28809485 | None:intergenic | 30.0% |
| !! | AAAATGCCTTTCTTTTCAAG+AGG | + | chr7.4:28809576-28809595 | None:intergenic | 30.0% |
| !! | CCAAATTTTCAAGACAAAAC+CGG | - | chr7.4:28810661-28810680 | MS.gene52226:CDS | 30.0% |
| !!! | AGCCATTGATTTTGTTATAG+TGG | + | chr7.4:28809476-28809495 | None:intergenic | 30.0% |
| !!! | TCTTTTTCAACACATTGTTC+AGG | + | chr7.4:28809776-28809795 | None:intergenic | 30.0% |
| AACATACTATCAGTAAGAGC+AGG | + | chr7.4:28812267-28812286 | None:intergenic | 35.0% | |
| AACATGTAGAGAAACATGGT+TGG | + | chr7.4:28811826-28811845 | None:intergenic | 35.0% | |
| AAGCTATGTGTTGAAGTTGT+TGG | - | chr7.4:28809261-28809280 | MS.gene52226:CDS | 35.0% | |
| AAGGGCGAAATGATGAATAA+TGG | - | chr7.4:28810395-28810414 | MS.gene52226:CDS | 35.0% | |
| AATACAACAGCATCAGATTG+TGG | + | chr7.4:28809546-28809565 | None:intergenic | 35.0% | |
| AATCAAGAATCAATAACCCG+CGG | - | chr7.4:28810687-28810706 | MS.gene52226:CDS | 35.0% | |
| AATTCCATGAGCAGTACTAT+TGG | - | chr7.4:28811209-28811228 | MS.gene52226:CDS | 35.0% | |
| ACATGTTCATAATAGGTCTG+TGG | - | chr7.4:28811839-28811858 | MS.gene52226:CDS | 35.0% | |
| ATCAGATTGTGGAACAAATG+AGG | + | chr7.4:28809535-28809554 | None:intergenic | 35.0% | |
| ATCATTGTTCAAGCTAGACT+TGG | - | chr7.4:28811565-28811584 | MS.gene52226:CDS | 35.0% | |
| ATGAATCCATTGTTGGCAAA+AGG | + | chr7.4:28809690-28809709 | None:intergenic | 35.0% | |
| ATTATGTGTGTAAATGCGAC+CGG | + | chr7.4:28811359-28811378 | None:intergenic | 35.0% | |
| ATTCAAAGATCGGTAAGGTT+CGG | - | chr7.4:28811311-28811330 | MS.gene52226:CDS | 35.0% | |
| ATTCCATGAGCAGTACTATT+GGG | - | chr7.4:28811210-28811229 | MS.gene52226:CDS | 35.0% | |
| CAACTATGGAAGAAACCAAT+TGG | - | chr7.4:28811043-28811062 | MS.gene52226:CDS | 35.0% | |
| CAAGCATCATGTAAAGAATG+TGG | + | chr7.4:28811780-28811799 | None:intergenic | 35.0% | |
| CAATGATTCAAAGATCGGTA+AGG | - | chr7.4:28811306-28811325 | MS.gene52226:CDS | 35.0% | |
| CACCAGTTAATTTCTTCAGA+AGG | - | chr7.4:28812238-28812257 | MS.gene52226:CDS | 35.0% | |
| CACTATCCTCTTGAAAAGAA+AGG | - | chr7.4:28809567-28809586 | MS.gene52226:CDS | 35.0% | |
| CAGCTAACTATGCTCAAATT+CGG | - | chr7.4:28810513-28810532 | MS.gene52226:CDS | 35.0% | |
| CCTTACACAAGATCAAATAC+CGG | - | chr7.4:28809725-28809744 | MS.gene52226:CDS | 35.0% | |
| CTTGAACAATGATCATTGCT+TGG | + | chr7.4:28811558-28811577 | None:intergenic | 35.0% | |
| GAAAGAAACACTAACTGTGT+AGG | + | chr7.4:28812165-28812184 | None:intergenic | 35.0% | |
| GAAGAAACCAATTGGTGTAT+TGG | - | chr7.4:28811051-28811070 | MS.gene52226:CDS | 35.0% | |
| GAAGATAAGGATGAGACTAT+TGG | - | chr7.4:28810773-28810792 | MS.gene52226:CDS | 35.0% | |
| GACAGCAATGATTCAAAGAT+CGG | - | chr7.4:28811301-28811320 | MS.gene52226:CDS | 35.0% | |
| GACTAATATCAGTTGGAAGT+TGG | - | chr7.4:28811707-28811726 | MS.gene52226:CDS | 35.0% | |
| GCAAACGCTTTAACAACTTT+CGG | + | chr7.4:28809909-28809928 | None:intergenic | 35.0% | |
| GGCAAAATATGGTCACAAAT+GGG | - | chr7.4:28811150-28811169 | MS.gene52226:CDS | 35.0% | |
| GTAACTTACCCCTTAACTTA+GGG | + | chr7.4:28812212-28812231 | None:intergenic | 35.0% | |
| GTATACTGTGTGGCAAAATA+TGG | - | chr7.4:28811139-28811158 | MS.gene52226:CDS | 35.0% | |
| TAGTACTGCTCATGGAATTT+CGG | + | chr7.4:28811208-28811227 | None:intergenic | 35.0% | |
| TCATAATAGGTCTGTGGAAA+TGG | - | chr7.4:28811845-28811864 | MS.gene52226:CDS | 35.0% | |
| TCATTGAGGTACATGAGAAA+CGG | + | chr7.4:28811444-28811463 | None:intergenic | 35.0% | |
| TGAAGTTGTTGTCAAAGACA+AGG | - | chr7.4:28810259-28810278 | MS.gene52226:CDS | 35.0% | |
| TGGCAAAATATGGTCACAAA+TGG | - | chr7.4:28811149-28811168 | MS.gene52226:CDS | 35.0% | |
| ! | AAAGTTGTTAAAGCGTTTGC+AGG | - | chr7.4:28809909-28809928 | MS.gene52226:CDS | 35.0% |
| ! | AAGTTGATTCATCTAGCACA+TGG | + | chr7.4:28810991-28811010 | None:intergenic | 35.0% |
| ! | ATCGATGTTTTTCTTGATGG+TGG | - | chr7.4:28810962-28810981 | MS.gene52226:CDS | 35.0% |
| ! | ATGATTTTGTTGGAATGGTG+AGG | - | chr7.4:28810294-28810313 | MS.gene52226:CDS | 35.0% |
| ! | ATTCATGGTGTTTTCTCTTG+TGG | - | chr7.4:28812116-28812135 | MS.gene52226:CDS | 35.0% |
| ! | CAGCTGGATTTTACTTAATG+AGG | - | chr7.4:28812184-28812203 | MS.gene52226:CDS | 35.0% |
| ! | TATCCATTGTTGTCACTTCA+AGG | - | chr7.4:28811379-28811398 | MS.gene52226:CDS | 35.0% |
| !! | CCGGTTTTGTCTTGAAAATT+TGG | + | chr7.4:28810664-28810683 | None:intergenic | 35.0% |
| !! | CGTTTTTCAATTGTGTTGAG+AGG | + | chr7.4:28810812-28810831 | None:intergenic | 35.0% |
| !! | GGTTTTGTATAGTGCATCTT+CGG | + | chr7.4:28811502-28811521 | None:intergenic | 35.0% |
| !! | TTGAGGTTTGATAACTTGCT+TGG | + | chr7.4:28809435-28809454 | None:intergenic | 35.0% |
| AAAGAGACAAGTCCTTCTCT+TGG | - | chr7.4:28809963-28809982 | MS.gene52226:CDS | 40.0% | |
| AAAGCCAGGATATAGTTCGT+TGG | - | chr7.4:28811974-28811993 | MS.gene52226:CDS | 40.0% | |
| AAATTCCCCTTGGTAAGGTT+AGG | - | chr7.4:28809499-28809518 | MS.gene52226:CDS | 40.0% | |
| AACAGAACCACCTCTTAGAA+AGG | - | chr7.4:28811591-28811610 | MS.gene52226:CDS | 40.0% | |
| AAGAAATTAACTGGTGCAGG+TGG | + | chr7.4:28812234-28812253 | None:intergenic | 40.0% | |
| ACAAGATCAAATACCGGTAC+CGG | - | chr7.4:28809731-28809750 | MS.gene52226:CDS | 40.0% | |
| ACATGCACTACTAAACTGGA+GGG | - | chr7.4:28812074-28812093 | MS.gene52226:CDS | 40.0% | |
| AGTACTGCTCATGGAATTTC+GGG | + | chr7.4:28811207-28811226 | None:intergenic | 40.0% | |
| ATGGAGCATGAGAAAAAGCA+AGG | - | chr7.4:28811651-28811670 | MS.gene52226:CDS | 40.0% | |
| ATTTCCAACGAAGAAAAGCC+AGG | - | chr7.4:28811960-28811979 | MS.gene52226:CDS | 40.0% | |
| CAACCAACCAAAACTAGAGA+TGG | - | chr7.4:28811100-28811119 | MS.gene52226:CDS | 40.0% | |
| CAGTTAGTGTTTCTTTCAGC+TGG | - | chr7.4:28812168-28812187 | MS.gene52226:CDS | 40.0% | |
| CCAACCTTGACAATCACATA+GGG | + | chr7.4:28810140-28810159 | None:intergenic | 40.0% | |
| CCAAGTTCCAATACACCAAT+TGG | + | chr7.4:28811061-28811080 | None:intergenic | 40.0% | |
| CCAATTGGTGTATTGGAACT+TGG | - | chr7.4:28811058-28811077 | MS.gene52226:CDS | 40.0% | |
| CCGAGAAAACTTCTTTCAGA+CGG | + | chr7.4:28811687-28811706 | None:intergenic | 40.0% | |
| CCGGTATTTGATCTTGTGTA+AGG | + | chr7.4:28809728-28809747 | None:intergenic | 40.0% | |
| CGTACGAAAAGATAGTCCAT+TGG | + | chr7.4:28810065-28810084 | None:intergenic | 40.0% | |
| CTAAAGTCTACACTTCTCCA+AGG | - | chr7.4:28810537-28810556 | MS.gene52226:CDS | 40.0% | |
| CTGAAGAAATTAACTGGTGC+AGG | + | chr7.4:28812237-28812256 | None:intergenic | 40.0% | |
| CTGATACAGACTCTCATCTA+TGG | - | chr7.4:28811632-28811651 | MS.gene52226:CDS | 40.0% | |
| GAAAGACTAGTGTTCATGTG+AGG | + | chr7.4:28811892-28811911 | None:intergenic | 40.0% | |
| GAACCTTGAAGTGACAACAA+TGG | + | chr7.4:28811385-28811404 | None:intergenic | 40.0% | |
| GATCATTACGGTCGAAGATA+AGG | - | chr7.4:28810760-28810779 | MS.gene52226:CDS | 40.0% | |
| GATGACATGGACTTAGCAAT+AGG | + | chr7.4:28810869-28810888 | None:intergenic | 40.0% | |
| GCTAATCATGTTGGTCATTG+AGG | + | chr7.4:28811458-28811477 | None:intergenic | 40.0% | |
| GGTAACTTACCCCTTAACTT+AGG | + | chr7.4:28812213-28812232 | None:intergenic | 40.0% | |
| GTCAAGGTTGGAAACTTCAA+AGG | - | chr7.4:28810149-28810168 | MS.gene52226:CDS | 40.0% | |
| TAAGTCCATGTCATCAGCAA+TGG | - | chr7.4:28810874-28810893 | MS.gene52226:CDS | 40.0% | |
| TAATAGGTCTGTGGAAATGG+AGG | - | chr7.4:28811848-28811867 | MS.gene52226:CDS | 40.0% | |
| TACATGCACTACTAAACTGG+AGG | - | chr7.4:28812073-28812092 | MS.gene52226:CDS | 40.0% | |
| TCCAACCTTGACAATCACAT+AGG | + | chr7.4:28810141-28810160 | None:intergenic | 40.0% | |
| TCCATTGTCAAACACACCAA+GGG | + | chr7.4:28811263-28811282 | None:intergenic | 40.0% | |
| TCTACACTTCTCCAAGGTTA+TGG | - | chr7.4:28810543-28810562 | MS.gene52226:CDS | 40.0% | |
| TCTTCGACCGTAATGATCAA+AGG | + | chr7.4:28810758-28810777 | None:intergenic | 40.0% | |
| TGACAATCACATAGGGATCA+AGG | + | chr7.4:28810133-28810152 | None:intergenic | 40.0% | |
| TGATCCCTATGTGATTGTCA+AGG | - | chr7.4:28810133-28810152 | MS.gene52226:CDS | 40.0% | |
| TTAACAACTTTCGGAGCAGA+CGG | + | chr7.4:28809900-28809919 | None:intergenic | 40.0% | |
| TTATGCAGGCTTCAAGATTG+AGG | + | chr7.4:28809452-28809471 | None:intergenic | 40.0% | |
| TTCACAATCCTATACCACTG+AGG | + | chr7.4:28810371-28810390 | None:intergenic | 40.0% | |
| TTCCATAGTTGTCTTGCAGT+AGG | + | chr7.4:28811034-28811053 | None:intergenic | 40.0% | |
| TTCTCGGGACTAATATCAGT+TGG | - | chr7.4:28811700-28811719 | MS.gene52226:CDS | 40.0% | |
| TTTGTAAATGAAGCCGGTAC+CGG | + | chr7.4:28809747-28809766 | None:intergenic | 40.0% | |
| ! | AACCTTACCAAGGGGAATTT+TGG | + | chr7.4:28809499-28809518 | None:intergenic | 40.0% |
| ! | AATGAGGCACCCTAAGTTAA+GGG | - | chr7.4:28812200-28812219 | MS.gene52226:CDS | 40.0% |
| ! | AGCTCCTGATGCTTTTGTTA+AGG | - | chr7.4:28810625-28810644 | MS.gene52226:CDS | 40.0% |
| ! | CAAGAACCTTTTGCCAACAA+TGG | - | chr7.4:28809681-28809700 | MS.gene52226:CDS | 40.0% |
| ! | CCGTCTGAAAGAAGTTTTCT+CGG | - | chr7.4:28811684-28811703 | MS.gene52226:CDS | 40.0% |
| ! | CGTCTGAAAGAAGTTTTCTC+GGG | - | chr7.4:28811685-28811704 | MS.gene52226:CDS | 40.0% |
| ! | GAAAGGTGAACTTGGTTTGA+AGG | - | chr7.4:28809605-28809624 | MS.gene52226:CDS | 40.0% |
| ! | GCTTTTGTTAAGGTGCAACA+TGG | - | chr7.4:28810635-28810654 | MS.gene52226:CDS | 40.0% |
| ! | TAATGAGGCACCCTAAGTTA+AGG | - | chr7.4:28812199-28812218 | MS.gene52226:CDS | 40.0% |
| ! | TGGCTTTTCTTCGTTGGAAA+TGG | + | chr7.4:28811961-28811980 | None:intergenic | 40.0% |
| ! | TTGTTGTCACTTCAAGGTTC+CGG | - | chr7.4:28811385-28811404 | MS.gene52226:CDS | 40.0% |
| !! | AGTTGCTTGTTGATTCTCCT+TGG | + | chr7.4:28810234-28810253 | None:intergenic | 40.0% |
| !! | ATATCCTGGCTTTTCTTCGT+TGG | + | chr7.4:28811967-28811986 | None:intergenic | 40.0% |
| !! | ATGGTTGGTAGAATGAGTTG+TGG | + | chr7.4:28811811-28811830 | None:intergenic | 40.0% |
| !! | TGCACCTTAACAAAAGCATC+AGG | + | chr7.4:28810632-28810651 | None:intergenic | 40.0% |
| !! | TGGTTGGTAGAATGAGTTGT+GGG | + | chr7.4:28811810-28811829 | None:intergenic | 40.0% |
| AAATCCAGACGAATTCGACG+AGG | - | chr7.4:28811927-28811946 | MS.gene52226:CDS | 45.0% | |
| AAGAATCAATAACCCGCGGT+GGG | - | chr7.4:28810691-28810710 | MS.gene52226:CDS | 45.0% | |
| AATGGCTCCAAAATTCCCCT+TGG | - | chr7.4:28809489-28809508 | MS.gene52226:CDS | 45.0% | |
| ACACGTAGGTACCATAACCT+TGG | + | chr7.4:28810557-28810576 | None:intergenic | 45.0% | |
| ACATAGCAACACAAGGTGAG+AGG | - | chr7.4:28812049-28812068 | MS.gene52226:CDS | 45.0% | |
| ACCAAAACTAGAGATGGCAG+AGG | - | chr7.4:28811106-28811125 | MS.gene52226:CDS | 45.0% | |
| ACCACCTCTTAGAAAGGAAG+TGG | - | chr7.4:28811597-28811616 | MS.gene52226:CDS | 45.0% | |
| ACCTCCAACGAACTATATCC+TGG | + | chr7.4:28811981-28812000 | None:intergenic | 45.0% | |
| AGACTAGTGTTCATGTGAGG+AGG | + | chr7.4:28811889-28811908 | None:intergenic | 45.0% | |
| AGATCGGTAAGGTTCGGATA+AGG | - | chr7.4:28811317-28811336 | MS.gene52226:CDS | 45.0% | |
| AGTGAGCCTAACCTTACCAA+GGG | + | chr7.4:28809508-28809527 | None:intergenic | 45.0% | |
| CAAAACTAGAGATGGCAGAG+GGG | - | chr7.4:28811108-28811127 | MS.gene52226:CDS | 45.0% | |
| CAATAGGATACCACCTGCTA+CGG | + | chr7.4:28810853-28810872 | None:intergenic | 45.0% | |
| CAATAGTCCTGAATGGAACC+TGG | - | chr7.4:28810196-28810215 | MS.gene52226:CDS | 45.0% | |
| CAGCAATGGAAGCAGAAGAA+AGG | - | chr7.4:28810888-28810907 | MS.gene52226:CDS | 45.0% | |
| CATGACCTTGTAGCCAAAGA+TGG | - | chr7.4:28809288-28809307 | MS.gene52226:CDS | 45.0% | |
| CCAAAACTAGAGATGGCAGA+GGG | - | chr7.4:28811107-28811126 | MS.gene52226:CDS | 45.0% | |
| CCAACCACTTCCTTTCTAAG+AGG | + | chr7.4:28811604-28811623 | None:intergenic | 45.0% | |
| CCCTATGTGATTGTCAAGGT+TGG | - | chr7.4:28810137-28810156 | MS.gene52226:CDS | 45.0% | |
| CCTACGTGTGAAAGTGATTG+AGG | - | chr7.4:28810568-28810587 | MS.gene52226:CDS | 45.0% | |
| CCTCAATCACTTTCACACGT+AGG | + | chr7.4:28810571-28810590 | None:intergenic | 45.0% | |
| CCTCTTAGAAAGGAAGTGGT+TGG | - | chr7.4:28811601-28811620 | MS.gene52226:CDS | 45.0% | |
| CTATGACCTTGTAGAGCCAA+TGG | - | chr7.4:28810046-28810065 | MS.gene52226:CDS | 45.0% | |
| CTCCAAAATTCCCCTTGGTA+AGG | - | chr7.4:28809494-28809513 | MS.gene52226:CDS | 45.0% | |
| CTTCCCAATAGTACTGCTCA+TGG | + | chr7.4:28811216-28811235 | None:intergenic | 45.0% | |
| CTTGGAGGTGGAAAAGTTGT+TGG | - | chr7.4:28809981-28810000 | MS.gene52226:CDS | 45.0% | |
| CTTGTAGCCAAAGATGGAGA+GGG | - | chr7.4:28809294-28809313 | MS.gene52226:CDS | 45.0% | |
| GACTAGTGTTCATGTGAGGA+GGG | + | chr7.4:28811888-28811907 | None:intergenic | 45.0% | |
| GCAAAAGGTTCTTGCATAGC+AGG | + | chr7.4:28809675-28809694 | None:intergenic | 45.0% | |
| GGCTACATGCACTACTAAAC+TGG | - | chr7.4:28812070-28812089 | MS.gene52226:CDS | 45.0% | |
| GGGATGCATGAGATGAAATC+TGG | - | chr7.4:28809873-28809892 | MS.gene52226:CDS | 45.0% | |
| GTACGATCGGTTGAGAAGTT+TGG | - | chr7.4:28811999-28812018 | MS.gene52226:CDS | 45.0% | |
| GTCCATTGTCAAACACACCA+AGG | + | chr7.4:28811264-28811283 | None:intergenic | 45.0% | |
| GTTCTTGCATAGCAGGAAGA+GGG | + | chr7.4:28809668-28809687 | None:intergenic | 45.0% | |
| GTTGGAGACATAGCAACACA+AGG | - | chr7.4:28812042-28812061 | MS.gene52226:CDS | 45.0% | |
| TAGTGCATCTTCGGCAAATG+CGG | + | chr7.4:28811493-28811512 | None:intergenic | 45.0% | |
| TGAGGTACATGAGAAACGGA+TGG | + | chr7.4:28811440-28811459 | None:intergenic | 45.0% | |
| TGCTTCCATTGCTGATGACA+TGG | + | chr7.4:28810882-28810901 | None:intergenic | 45.0% | |
| TTGGTGGAAGAATTCTTCGC+GGG | - | chr7.4:28810000-28810019 | MS.gene52226:CDS | 45.0% | |
| TTGTAGCCAAAGATGGAGAG+GGG | - | chr7.4:28809295-28809314 | MS.gene52226:CDS | 45.0% | |
| ! | ACCACTTCCTTTCTAAGAGG+TGG | + | chr7.4:28811601-28811620 | None:intergenic | 45.0% |
| ! | ACCCTTGGTGTGTTTGACAA+TGG | - | chr7.4:28811259-28811278 | MS.gene52226:CDS | 45.0% |
| ! | ACTTTTCCACCTCCAAGAGA+AGG | + | chr7.4:28809978-28809997 | None:intergenic | 45.0% |
| ! | ATGAGGCACCCTAAGTTAAG+GGG | - | chr7.4:28812201-28812220 | MS.gene52226:CDS | 45.0% |
| ! | ATGAGGCTTTTCCTGATGCT+TGG | - | chr7.4:28810456-28810475 | MS.gene52226:CDS | 45.0% |
| ! | CTTCCAAGGATGGATTTGAC+CGG | - | chr7.4:28810104-28810123 | MS.gene52226:CDS | 45.0% |
| ! | GGGTTTGAGGCTCTTAAAGA+AGG | + | chr7.4:28809648-28809667 | None:intergenic | 45.0% |
| ! | GTTGGTGGAAGAATTCTTCG+CGG | - | chr7.4:28809999-28810018 | MS.gene52226:CDS | 45.0% |
| ! | TAGTTCGTTGGAGGTACGAT+CGG | - | chr7.4:28811986-28812005 | MS.gene52226:CDS | 45.0% |
| !! | AGGAGCTCTAGACTTGTTGT+CGG | + | chr7.4:28810612-28810631 | None:intergenic | 45.0% |
| !! | ATAATGCTTGCTGTCTGGCA+TGG | - | chr7.4:28810422-28810441 | MS.gene52226:CDS | 45.0% |
| !! | CATTGGCTCTACAAGGTCAT+AGG | + | chr7.4:28810048-28810067 | None:intergenic | 45.0% |
| !! | GAGAGATAATGCTTGCTGTC+TGG | - | chr7.4:28810417-28810436 | MS.gene52226:CDS | 45.0% |
| !! | GATAGTCCATTGGCTCTACA+AGG | + | chr7.4:28810055-28810074 | None:intergenic | 45.0% |
| !!! | CTGCCATCTCTAGTTTTGGT+TGG | + | chr7.4:28811106-28811125 | None:intergenic | 45.0% |
| !!! | GGCATTTTTTCGCGTACGAA+AGG | - | chr7.4:28809588-28809607 | MS.gene52226:CDS | 45.0% |
| AACTCCTCGTCGAATTCGTC+TGG | + | chr7.4:28811934-28811953 | None:intergenic | 50.0% | |
| ACAAGTCCTTCTCTTGGAGG+TGG | - | chr7.4:28809969-28809988 | MS.gene52226:CDS | 50.0% | |
| AGATGACCCCTCTCCATCTT+TGG | + | chr7.4:28809304-28809323 | None:intergenic | 50.0% | |
| AGGCTCTCAACGTTGGAAAC+CGG | - | chr7.4:28811337-28811356 | MS.gene52226:CDS | 50.0% | |
| AGGTTCCGGTCTCAAGAAGA+TGG | - | chr7.4:28811399-28811418 | MS.gene52226:CDS | 50.0% | |
| ATCGGTTGAGAAGTTTGGCG+GGG | - | chr7.4:28812004-28812023 | MS.gene52226:CDS | 50.0% | |
| ATGACCGAAAAGTCCGTAGC+AGG | - | chr7.4:28810837-28810856 | MS.gene52226:CDS | 50.0% | |
| CAAGAATCAATAACCCGCGG+TGG | - | chr7.4:28810690-28810709 | MS.gene52226:CDS | 50.0% | |
| CACATAGGGATCAAGGCTAC+CGG | + | chr7.4:28810126-28810145 | None:intergenic | 50.0% | |
| CAGTGAGCCTAACCTTACCA+AGG | + | chr7.4:28809509-28809528 | None:intergenic | 50.0% | |
| CATAGCAGGAAGAGGGTTTG+AGG | + | chr7.4:28809661-28809680 | None:intergenic | 50.0% | |
| CCTCTCCATCTTTGGCTACA+AGG | + | chr7.4:28809296-28809315 | None:intergenic | 50.0% | |
| CCTGGTGTTTGCATTTGCCA+AGG | - | chr7.4:28810214-28810233 | MS.gene52226:CDS | 50.0% | |
| CCTTGGCAAATGCAAACACC+AGG | + | chr7.4:28810217-28810236 | None:intergenic | 50.0% | |
| CCTTGTAGCCAAAGATGGAG+AGG | - | chr7.4:28809293-28809312 | MS.gene52226:CDS | 50.0% | |
| CGATCGGTTGAGAAGTTTGG+CGG | - | chr7.4:28812002-28812021 | MS.gene52226:CDS | 50.0% | |
| CTACCGGTCAAATCCATCCT+TGG | + | chr7.4:28810110-28810129 | None:intergenic | 50.0% | |
| CTATACCACTGAGGAGCCAA+AGG | + | chr7.4:28810362-28810381 | None:intergenic | 50.0% | |
| CTCACCCATCTTCTTGAGAC+CGG | + | chr7.4:28811407-28811426 | None:intergenic | 50.0% | |
| CTTGGTAAGGTTAGGCTCAC+TGG | - | chr7.4:28809507-28809526 | MS.gene52226:CDS | 50.0% | |
| GAATCGGAATGCCAAGCATC+AGG | + | chr7.4:28810470-28810489 | None:intergenic | 50.0% | |
| GAGACAAGTCCTTCTCTTGG+AGG | - | chr7.4:28809966-28809985 | MS.gene52226:CDS | 50.0% | |
| GATCGGTTGAGAAGTTTGGC+GGG | - | chr7.4:28812003-28812022 | MS.gene52226:CDS | 50.0% | |
| GCAAACACCAGGTTCCATTC+AGG | + | chr7.4:28810206-28810225 | None:intergenic | 50.0% | |
| GCCAGGATATAGTTCGTTGG+AGG | - | chr7.4:28811977-28811996 | MS.gene52226:CDS | 50.0% | |
| GGAGGTGGAAAAGTTGTTGG+TGG | - | chr7.4:28809984-28810003 | MS.gene52226:CDS | 50.0% | |
| GGCAGCAGATGTATACTGTG+TGG | - | chr7.4:28811129-28811148 | MS.gene52226:CDS | 50.0% | |
| GGCCTACTGCAAGACAACTA+TGG | - | chr7.4:28811029-28811048 | MS.gene52226:CDS | 50.0% | |
| GGTTCCGGTCTCAAGAAGAT+GGG | - | chr7.4:28811400-28811419 | MS.gene52226:CDS | 50.0% | |
| GGTTCTTGCATAGCAGGAAG+AGG | + | chr7.4:28809669-28809688 | None:intergenic | 50.0% | |
| GTGAGCCTAACCTTACCAAG+GGG | + | chr7.4:28809507-28809526 | None:intergenic | 50.0% | |
| TCGCGTACGAAAGGTGAACT+TGG | - | chr7.4:28809597-28809616 | MS.gene52226:CDS | 50.0% | |
| TCGGATAAGGCTCTCAACGT+TGG | - | chr7.4:28811330-28811349 | MS.gene52226:CDS | 50.0% | |
| TGAAAGCTCGCGATCTTCCA+AGG | - | chr7.4:28810090-28810109 | MS.gene52226:CDS | 50.0% | |
| TGAGGAGCCAAAGGACTATC+AGG | + | chr7.4:28810353-28810372 | None:intergenic | 50.0% | |
| TTCATGTGAGGAGGGTTCCT+CGG | + | chr7.4:28811880-28811899 | None:intergenic | 50.0% | |
| ! | ACCACCTGCTACGGACTTTT+CGG | + | chr7.4:28810844-28810863 | None:intergenic | 50.0% |
| ! | ATAGTCCTTTGGCTCCTCAG+TGG | - | chr7.4:28810354-28810373 | MS.gene52226:CDS | 50.0% |
| ! | CTTTGGCTCCTCAGTGGTAT+AGG | - | chr7.4:28810360-28810379 | MS.gene52226:CDS | 50.0% |
| !! | ACAAGGTCATAGGTGCTGCT+AGG | + | chr7.4:28810038-28810057 | None:intergenic | 50.0% |
| !! | CCCTCTGCCATCTCTAGTTT+TGG | + | chr7.4:28811110-28811129 | None:intergenic | 50.0% |
| !! | GGAGCTCTAGACTTGTTGTC+GGG | + | chr7.4:28810611-28810630 | None:intergenic | 50.0% |
| !! | GGGAGGGTTCAAAGTGTTGT+TGG | - | chr7.4:28812024-28812043 | MS.gene52226:CDS | 50.0% |
| AATAACCCGCGGTGGGATCA+AGG | - | chr7.4:28810698-28810717 | MS.gene52226:CDS | 55.0% | |
| ACCGAAAAGTCCGTAGCAGG+TGG | - | chr7.4:28810840-28810859 | MS.gene52226:CDS | 55.0% | |
| AGCTCGCGATCTTCCAAGGA+TGG | - | chr7.4:28810094-28810113 | MS.gene52226:CDS | 55.0% | |
| CACACCAAGGGTGAGAACTG+TGG | + | chr7.4:28811251-28811270 | None:intergenic | 55.0% | |
| CCAAGGGTGAGAACTGTGGA+TGG | + | chr7.4:28811247-28811266 | None:intergenic | 55.0% | |
| CCATCCACAGTTCTCACCCT+TGG | - | chr7.4:28811244-28811263 | MS.gene52226:CDS | 55.0% | |
| CGGTCTCAAGAAGATGGGTG+AGG | - | chr7.4:28811405-28811424 | MS.gene52226:CDS | 55.0% | |
| CGTTCCGCCTGATAGTCCTT+TGG | - | chr7.4:28810343-28810362 | MS.gene52226:CDS | 55.0% | |
| GCATGGCACACAAGCTGATG+AGG | - | chr7.4:28810439-28810458 | MS.gene52226:CDS | 55.0% | |
| GGAGCCAAAGGACTATCAGG+CGG | + | chr7.4:28810350-28810369 | None:intergenic | 55.0% | |
| GTGCGAACGCGAACGATTGT+TGG | - | chr7.4:28811172-28811191 | MS.gene52226:CDS | 55.0% | |
| GTTGAGAAGTTTGGCGGGGA+GGG | - | chr7.4:28812008-28812027 | MS.gene52226:CDS | 55.0% | |
| TCATGTGAGGAGGGTTCCTC+GGG | + | chr7.4:28811879-28811898 | None:intergenic | 55.0% | |
| ! | AGAGTACCTTGATCCCACCG+CGG | + | chr7.4:28810707-28810726 | None:intergenic | 55.0% |
| !! | AGGTCATAGGTGCTGCTAGG+AGG | + | chr7.4:28810035-28810054 | None:intergenic | 55.0% |
| AGGCACAGCAGCGTCTGCAA+TGG | - | chr7.4:28809929-28809948 | MS.gene52226:CDS | 60.0% | |
| CTATCAGGCGGAACGCGCTT+AGG | + | chr7.4:28810338-28810357 | None:intergenic | 60.0% | |
| GAGTACCTTGATCCCACCGC+GGG | + | chr7.4:28810706-28810725 | None:intergenic | 60.0% | |
| GGAAATGGAGGTTTCGCCCG+AGG | - | chr7.4:28811860-28811879 | MS.gene52226:CDS | 60.0% | |
| GGTTGAGAAGTTTGGCGGGG+AGG | - | chr7.4:28812007-28812026 | MS.gene52226:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 28809249 | 28812290 | 28809249 | ID=MS.gene52226 |
| chr7.4 | mRNA | 28809249 | 28812290 | 28809249 | ID=MS.gene52226.t1;Parent=MS.gene52226 |
| chr7.4 | exon | 28809249 | 28812290 | 28809249 | ID=MS.gene52226.t1.exon1;Parent=MS.gene52226.t1 |
| chr7.4 | CDS | 28809249 | 28812290 | 28809249 | ID=cds.MS.gene52226.t1;Parent=MS.gene52226.t1 |
| Gene Sequence |
| Protein sequence |
