Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52368.t1 | XP_024635482.1 | 96.1 | 233 | 9 | 0 | 1 | 233 | 215 | 447 | 3.20E-115 | 424.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52368.t1 | Q93Y91 | 55.7 | 235 | 101 | 2 | 1 | 232 | 213 | 447 | 5.3e-66 | 252.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52368.t1 | A0A396IVA9 | 96.1 | 233 | 9 | 0 | 1 | 233 | 215 | 447 | 2.3e-115 | 424.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene52368 | 0.824437 | 8.07E-54 | -1.69E-46 |
| MS.gene050096 | MS.gene52368 | 0.817028 | 4.08E-52 | -1.69E-46 |
| MS.gene050404 | MS.gene52368 | -0.800984 | 1.12E-48 | -1.69E-46 |
| MS.gene050406 | MS.gene52368 | -0.80091 | 1.15E-48 | -1.69E-46 |
| MS.gene050529 | MS.gene52368 | -0.81873 | 1.68E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene52368 | -0.802879 | 4.55E-49 | -1.69E-46 |
| MS.gene051158 | MS.gene52368 | 0.813057 | 3.10E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene52368 | -0.825863 | 3.72E-54 | -1.69E-46 |
| MS.gene052223 | MS.gene52368 | 0.80892 | 2.44E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene52368 | -0.807301 | 5.40E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene52368 | -0.811543 | 6.64E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene52368 | 0.843745 | 1.16E-58 | -1.69E-46 |
| MS.gene05244 | MS.gene52368 | 0.809487 | 1.85E-50 | -1.69E-46 |
| MS.gene053031 | MS.gene52368 | 0.838264 | 3.19E-57 | -1.69E-46 |
| MS.gene053406 | MS.gene52368 | 0.840464 | 8.56E-58 | -1.69E-46 |
| MS.gene053557 | MS.gene52368 | -0.81193 | 5.47E-51 | -1.69E-46 |
| MS.gene053912 | MS.gene52368 | -0.808503 | 3.00E-50 | -1.69E-46 |
| MS.gene054181 | MS.gene52368 | 0.826122 | 3.22E-54 | -1.69E-46 |
| MS.gene054290 | MS.gene52368 | 0.8016 | 8.34E-49 | -1.69E-46 |
| MS.gene054421 | MS.gene52368 | 0.847479 | 1.13E-59 | -1.69E-46 |
| MS.gene054742 | MS.gene52368 | 0.836693 | 8.06E-57 | -1.69E-46 |
| MS.gene055116 | MS.gene52368 | -0.809705 | 1.66E-50 | -1.69E-46 |
| MS.gene055601 | MS.gene52368 | 0.814638 | 1.39E-51 | -1.69E-46 |
| MS.gene056330 | MS.gene52368 | 0.802031 | 6.80E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene52368 | -0.804999 | 1.65E-49 | -1.69E-46 |
| MS.gene056690 | MS.gene52368 | 0.801238 | 9.89E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene52368 | 0.806719 | 7.18E-50 | -1.69E-46 |
| MS.gene056920 | MS.gene52368 | 0.832137 | 1.12E-55 | -1.69E-46 |
| MS.gene057396 | MS.gene52368 | -0.802097 | 6.60E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene52368 | -0.804846 | 1.78E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene52368 | -0.800571 | 1.35E-48 | -1.69E-46 |
| MS.gene057825 | MS.gene52368 | -0.801134 | 1.04E-48 | -1.69E-46 |
| MS.gene058218 | MS.gene52368 | 0.830833 | 2.35E-55 | -1.69E-46 |
| MS.gene058660 | MS.gene52368 | -0.804832 | 1.79E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene52368 | -0.812213 | 4.75E-51 | -1.69E-46 |
| MS.gene059043 | MS.gene52368 | 0.811366 | 7.26E-51 | -1.69E-46 |
| MS.gene059294 | MS.gene52368 | -0.815196 | 1.05E-51 | -1.69E-46 |
| MS.gene059402 | MS.gene52368 | 0.840907 | 6.55E-58 | -1.69E-46 |
| MS.gene059955 | MS.gene52368 | 0.818948 | 1.50E-52 | -1.69E-46 |
| MS.gene060087 | MS.gene52368 | 0.81226 | 4.64E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52368.t1 | MTR_3g074390 | 90.129 | 233 | 23 | 0 | 1 | 233 | 217 | 449 | 3.14e-150 | 428 |
| MS.gene52368.t1 | MTR_3g074410 | 80.258 | 233 | 46 | 0 | 1 | 233 | 214 | 446 | 1.19e-135 | 391 |
| MS.gene52368.t1 | MTR_3g074370 | 76.395 | 233 | 55 | 0 | 1 | 233 | 45 | 277 | 5.42e-133 | 378 |
| MS.gene52368.t1 | MTR_3g074340 | 76.395 | 233 | 55 | 0 | 1 | 233 | 45 | 277 | 8.59e-133 | 377 |
| MS.gene52368.t1 | MTR_3g074320 | 75.966 | 233 | 56 | 0 | 1 | 233 | 45 | 277 | 3.48e-132 | 376 |
| MS.gene52368.t1 | MTR_3g074380 | 92.763 | 152 | 11 | 0 | 1 | 152 | 215 | 366 | 1.74e-97 | 289 |
| MS.gene52368.t1 | MTR_3g074270 | 62.232 | 233 | 67 | 2 | 1 | 233 | 212 | 423 | 2.60e-97 | 292 |
| MS.gene52368.t1 | MTR_3g093060 | 47.210 | 233 | 120 | 3 | 2 | 233 | 169 | 399 | 4.29e-80 | 247 |
| MS.gene52368.t1 | MTR_3g074400 | 60.092 | 218 | 64 | 2 | 17 | 233 | 168 | 363 | 1.28e-79 | 245 |
| MS.gene52368.t1 | MTR_3g008160 | 50.000 | 234 | 112 | 4 | 1 | 233 | 166 | 395 | 4.27e-77 | 239 |
| MS.gene52368.t1 | MTR_5g006070 | 45.494 | 233 | 124 | 3 | 1 | 233 | 167 | 396 | 8.91e-77 | 239 |
| MS.gene52368.t1 | MTR_3g008160 | 50.000 | 234 | 112 | 4 | 1 | 233 | 215 | 444 | 1.93e-76 | 239 |
| MS.gene52368.t1 | MTR_5g006070 | 45.494 | 233 | 124 | 3 | 1 | 233 | 215 | 444 | 2.26e-76 | 239 |
| MS.gene52368.t1 | MTR_0204s0020 | 48.069 | 233 | 117 | 3 | 1 | 233 | 208 | 436 | 3.17e-76 | 238 |
| MS.gene52368.t1 | MTR_0204s0020 | 48.069 | 233 | 117 | 3 | 1 | 233 | 211 | 439 | 3.56e-76 | 238 |
| MS.gene52368.t1 | MTR_5g082540 | 48.498 | 233 | 118 | 2 | 1 | 233 | 214 | 444 | 4.36e-76 | 238 |
| MS.gene52368.t1 | MTR_3g008170 | 50.000 | 234 | 113 | 3 | 1 | 233 | 215 | 445 | 1.88e-75 | 237 |
| MS.gene52368.t1 | MTR_5g041550 | 45.887 | 231 | 122 | 3 | 4 | 233 | 219 | 447 | 2.09e-74 | 234 |
| MS.gene52368.t1 | MTR_1g104780 | 45.064 | 233 | 125 | 3 | 1 | 233 | 215 | 444 | 2.50e-73 | 231 |
| MS.gene52368.t1 | MTR_3g093010 | 44.783 | 230 | 124 | 3 | 3 | 231 | 217 | 444 | 1.43e-71 | 227 |
| MS.gene52368.t1 | MTR_1g038600 | 44.635 | 233 | 127 | 2 | 1 | 233 | 196 | 426 | 2.07e-71 | 226 |
| MS.gene52368.t1 | MTR_1g038630 | 44.206 | 233 | 128 | 2 | 1 | 233 | 214 | 444 | 4.69e-71 | 225 |
| MS.gene52368.t1 | MTR_5g094760 | 50.431 | 232 | 111 | 3 | 1 | 232 | 217 | 444 | 6.16e-71 | 225 |
| MS.gene52368.t1 | MTR_0204s0040 | 47.210 | 233 | 119 | 3 | 1 | 233 | 219 | 447 | 7.17e-71 | 225 |
| MS.gene52368.t1 | MTR_4g091370 | 43.348 | 233 | 129 | 3 | 1 | 232 | 215 | 445 | 9.04e-70 | 222 |
| MS.gene52368.t1 | MTR_4g116770 | 47.210 | 233 | 119 | 3 | 1 | 233 | 415 | 643 | 3.61e-69 | 225 |
| MS.gene52368.t1 | MTR_7g091690 | 48.276 | 232 | 116 | 3 | 1 | 232 | 217 | 444 | 6.29e-68 | 217 |
| MS.gene52368.t1 | MTR_4g090600 | 44.872 | 234 | 126 | 3 | 1 | 233 | 215 | 446 | 6.93e-68 | 217 |
| MS.gene52368.t1 | MTR_0009s0370 | 44.348 | 230 | 125 | 3 | 3 | 231 | 216 | 443 | 1.44e-67 | 216 |
| MS.gene52368.t1 | MTR_1g104750 | 42.918 | 233 | 130 | 3 | 1 | 233 | 215 | 444 | 2.09e-67 | 216 |
| MS.gene52368.t1 | MTR_4g116790 | 47.639 | 233 | 118 | 3 | 1 | 233 | 217 | 445 | 2.12e-67 | 216 |
| MS.gene52368.t1 | MTR_1g104770 | 43.348 | 233 | 129 | 3 | 1 | 233 | 216 | 445 | 8.03e-67 | 214 |
| MS.gene52368.t1 | MTR_3g023480 | 42.609 | 230 | 129 | 3 | 3 | 231 | 216 | 443 | 1.14e-65 | 211 |
| MS.gene52368.t1 | MTR_3g007910 | 43.103 | 232 | 111 | 4 | 3 | 233 | 203 | 414 | 8.29e-65 | 208 |
| MS.gene52368.t1 | MTR_8g102860 | 42.489 | 233 | 129 | 4 | 1 | 232 | 165 | 393 | 6.65e-62 | 201 |
| MS.gene52368.t1 | MTR_8g102860 | 42.489 | 233 | 129 | 4 | 1 | 232 | 217 | 445 | 1.60e-61 | 201 |
| MS.gene52368.t1 | MTR_6g087040 | 40.343 | 233 | 134 | 5 | 1 | 232 | 217 | 445 | 8.93e-57 | 188 |
| MS.gene52368.t1 | MTR_6g088375 | 40.343 | 233 | 134 | 5 | 1 | 232 | 217 | 445 | 8.93e-57 | 188 |
| MS.gene52368.t1 | MTR_4g116790 | 48.344 | 151 | 76 | 2 | 1 | 151 | 217 | 365 | 1.77e-42 | 148 |
| MS.gene52368.t1 | MTR_1g038620 | 36.913 | 149 | 75 | 3 | 1 | 149 | 61 | 190 | 1.52e-27 | 104 |
| MS.gene52368.t1 | MTR_8g077310 | 29.075 | 227 | 159 | 1 | 4 | 230 | 118 | 342 | 2.07e-26 | 105 |
| MS.gene52368.t1 | MTR_8g077310 | 29.075 | 227 | 159 | 1 | 4 | 230 | 215 | 439 | 5.35e-26 | 105 |
| MS.gene52368.t1 | MTR_8g077300 | 29.956 | 227 | 157 | 1 | 4 | 230 | 207 | 431 | 1.10e-25 | 104 |
| MS.gene52368.t1 | MTR_2g013310 | 30.769 | 234 | 149 | 4 | 6 | 233 | 157 | 383 | 5.79e-24 | 99.4 |
| MS.gene52368.t1 | MTR_4g069500 | 27.490 | 251 | 159 | 4 | 1 | 233 | 13 | 258 | 6.18e-24 | 97.8 |
| MS.gene52368.t1 | MTR_2g013310 | 30.769 | 234 | 149 | 4 | 6 | 233 | 230 | 456 | 7.04e-24 | 99.8 |
| MS.gene52368.t1 | MTR_4g069500 | 27.490 | 251 | 159 | 4 | 1 | 233 | 152 | 397 | 3.02e-23 | 97.4 |
| MS.gene52368.t1 | MTR_4g069500 | 27.490 | 251 | 159 | 4 | 1 | 233 | 202 | 447 | 3.58e-23 | 97.4 |
| MS.gene52368.t1 | MTR_6g088450 | 29.289 | 239 | 159 | 4 | 2 | 233 | 231 | 466 | 1.82e-22 | 95.5 |
| MS.gene52368.t1 | MTR_5g020270 | 30.263 | 228 | 155 | 3 | 4 | 230 | 118 | 342 | 2.52e-22 | 94.4 |
| MS.gene52368.t1 | MTR_4g072030 | 30.165 | 242 | 145 | 6 | 10 | 233 | 208 | 443 | 3.60e-22 | 94.7 |
| MS.gene52368.t1 | MTR_8g103500 | 28.033 | 239 | 159 | 5 | 4 | 233 | 193 | 427 | 4.35e-22 | 94.4 |
| MS.gene52368.t1 | MTR_5g020270 | 30.263 | 228 | 155 | 3 | 4 | 230 | 218 | 442 | 4.56e-22 | 94.4 |
| MS.gene52368.t1 | MTR_7g446340 | 27.426 | 237 | 153 | 5 | 6 | 233 | 232 | 458 | 4.83e-22 | 94.4 |
| MS.gene52368.t1 | MTR_6g007340 | 27.426 | 237 | 153 | 5 | 6 | 233 | 232 | 458 | 4.83e-22 | 94.4 |
| MS.gene52368.t1 | MTR_4g118610 | 26.407 | 231 | 164 | 2 | 1 | 231 | 217 | 441 | 6.02e-21 | 91.3 |
| MS.gene52368.t1 | MTR_7g094110 | 28.936 | 235 | 152 | 6 | 1 | 231 | 207 | 430 | 7.37e-21 | 90.9 |
| MS.gene52368.t1 | MTR_7g094450 | 27.660 | 235 | 155 | 6 | 1 | 231 | 205 | 428 | 2.73e-20 | 89.4 |
| MS.gene52368.t1 | MTR_2g020710 | 25.105 | 239 | 157 | 4 | 1 | 231 | 125 | 349 | 3.32e-20 | 88.6 |
| MS.gene52368.t1 | MTR_7g113960 | 25.439 | 228 | 155 | 4 | 7 | 231 | 198 | 413 | 5.57e-20 | 88.2 |
| MS.gene52368.t1 | MTR_2g020710 | 25.316 | 237 | 155 | 4 | 3 | 231 | 216 | 438 | 6.20e-20 | 88.2 |
| MS.gene52368.t1 | MTR_1g022315 | 26.724 | 232 | 159 | 3 | 4 | 230 | 118 | 343 | 6.24e-20 | 87.8 |
| MS.gene52368.t1 | MTR_1g022315 | 26.724 | 232 | 159 | 3 | 4 | 230 | 217 | 442 | 1.29e-19 | 87.4 |
| MS.gene52368.t1 | MTR_3g116240 | 26.877 | 253 | 160 | 5 | 1 | 233 | 200 | 447 | 1.36e-19 | 87.4 |
| MS.gene52368.t1 | MTR_8g077890 | 29.482 | 251 | 137 | 7 | 10 | 233 | 201 | 438 | 1.98e-19 | 86.7 |
| MS.gene52368.t1 | MTR_7g113970 | 25.217 | 230 | 155 | 4 | 7 | 231 | 233 | 450 | 2.89e-19 | 86.3 |
| MS.gene52368.t1 | MTR_6g018790 | 26.050 | 238 | 155 | 5 | 1 | 233 | 277 | 498 | 7.08e-18 | 82.4 |
| MS.gene52368.t1 | MTR_7g082270 | 25.630 | 238 | 156 | 5 | 1 | 233 | 237 | 458 | 8.09e-18 | 82.0 |
| MS.gene52368.t1 | MTR_5g096000 | 40.426 | 94 | 51 | 2 | 145 | 233 | 152 | 245 | 5.47e-17 | 78.6 |
| MS.gene52368.t1 | MTR_8g077310 | 29.605 | 152 | 105 | 1 | 4 | 155 | 215 | 364 | 2.21e-16 | 77.8 |
| MS.gene52368.t1 | MTR_7g082270 | 24.336 | 226 | 150 | 5 | 1 | 221 | 237 | 446 | 1.27e-15 | 75.5 |
| MS.gene52368.t1 | MTR_4g077740 | 30.244 | 205 | 126 | 7 | 22 | 221 | 252 | 444 | 2.94e-15 | 74.7 |
| MS.gene52368.t1 | MTR_5g075300 | 23.622 | 254 | 166 | 4 | 1 | 233 | 192 | 438 | 1.04e-14 | 73.2 |
| MS.gene52368.t1 | MTR_4g013205 | 26.754 | 228 | 151 | 5 | 7 | 232 | 214 | 427 | 1.25e-14 | 72.8 |
| MS.gene52368.t1 | MTR_5g020270 | 26.754 | 228 | 142 | 4 | 4 | 230 | 218 | 421 | 1.28e-14 | 72.8 |
| MS.gene52368.t1 | MTR_7g094110 | 26.923 | 234 | 138 | 6 | 1 | 231 | 207 | 410 | 2.80e-14 | 71.6 |
| MS.gene52368.t1 | MTR_1g116660 | 25.000 | 232 | 162 | 7 | 7 | 233 | 214 | 438 | 3.87e-14 | 71.2 |
| MS.gene52368.t1 | MTR_2g020710 | 28.676 | 136 | 95 | 1 | 3 | 138 | 216 | 349 | 4.25e-14 | 71.2 |
| MS.gene52368.t1 | MTR_4g118610 | 25.373 | 201 | 144 | 2 | 3 | 203 | 219 | 413 | 4.46e-14 | 71.2 |
| MS.gene52368.t1 | MTR_2g020710 | 28.676 | 136 | 95 | 1 | 3 | 138 | 216 | 349 | 4.67e-14 | 70.9 |
| MS.gene52368.t1 | MTR_2g020710 | 28.676 | 136 | 95 | 1 | 3 | 138 | 216 | 349 | 7.41e-14 | 70.1 |
| MS.gene52368.t1 | MTR_5g019870 | 24.597 | 248 | 159 | 7 | 8 | 233 | 194 | 435 | 1.00e-13 | 70.1 |
| MS.gene52368.t1 | MTR_6g087910 | 22.685 | 216 | 155 | 4 | 10 | 225 | 231 | 434 | 2.18e-13 | 69.3 |
| MS.gene52368.t1 | MTR_2g049020 | 29.560 | 159 | 101 | 5 | 7 | 157 | 205 | 360 | 4.77e-13 | 68.2 |
| MS.gene52368.t1 | MTR_3g084110 | 22.318 | 233 | 167 | 5 | 7 | 233 | 207 | 431 | 5.26e-13 | 68.2 |
| MS.gene52368.t1 | MTR_7g005910 | 24.348 | 230 | 165 | 5 | 7 | 233 | 212 | 435 | 2.59e-12 | 65.9 |
| MS.gene52368.t1 | MTR_1g116650 | 27.564 | 156 | 107 | 3 | 81 | 233 | 316 | 468 | 5.79e-12 | 65.1 |
| MS.gene52368.t1 | MTR_2g026140 | 27.673 | 159 | 105 | 3 | 8 | 157 | 192 | 349 | 1.81e-11 | 63.5 |
| MS.gene52368.t1 | MTR_7g113970 | 24.812 | 133 | 97 | 1 | 8 | 140 | 234 | 363 | 4.90e-11 | 62.0 |
| MS.gene52368.t1 | MTR_7g113960 | 25.564 | 133 | 96 | 1 | 8 | 140 | 199 | 328 | 5.32e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52368.t1 | AT1G34580 | 55.745 | 235 | 101 | 2 | 1 | 232 | 163 | 397 | 2.51e-88 | 268 |
| MS.gene52368.t1 | AT1G34580 | 55.745 | 235 | 101 | 2 | 1 | 232 | 213 | 447 | 7.15e-88 | 269 |
| MS.gene52368.t1 | AT1G11260 | 47.863 | 234 | 119 | 3 | 1 | 233 | 215 | 446 | 3.70e-78 | 244 |
| MS.gene52368.t1 | AT3G19940 | 47.210 | 233 | 121 | 2 | 1 | 233 | 216 | 446 | 6.32e-78 | 243 |
| MS.gene52368.t1 | AT1G50310 | 47.863 | 234 | 119 | 3 | 1 | 233 | 73 | 304 | 4.86e-76 | 234 |
| MS.gene52368.t1 | AT5G26340 | 46.352 | 233 | 122 | 3 | 1 | 233 | 216 | 445 | 1.67e-75 | 237 |
| MS.gene52368.t1 | AT1G50310 | 47.863 | 234 | 119 | 3 | 1 | 233 | 216 | 447 | 1.36e-74 | 235 |
| MS.gene52368.t1 | AT4G21480 | 48.069 | 233 | 118 | 3 | 1 | 232 | 213 | 443 | 1.46e-74 | 234 |
| MS.gene52368.t1 | AT3G19930 | 48.052 | 231 | 118 | 2 | 3 | 233 | 216 | 444 | 1.99e-74 | 234 |
| MS.gene52368.t1 | AT3G19930 | 48.052 | 231 | 118 | 2 | 3 | 233 | 216 | 444 | 1.99e-74 | 234 |
| MS.gene52368.t1 | AT4G02050 | 45.690 | 232 | 122 | 3 | 1 | 232 | 217 | 444 | 5.55e-74 | 233 |
| MS.gene52368.t1 | AT4G02050 | 45.690 | 232 | 122 | 3 | 1 | 232 | 217 | 444 | 5.55e-74 | 233 |
| MS.gene52368.t1 | AT5G23270 | 47.727 | 220 | 113 | 2 | 1 | 220 | 217 | 434 | 5.12e-70 | 223 |
| MS.gene52368.t1 | AT3G05960 | 42.918 | 233 | 129 | 3 | 1 | 233 | 211 | 439 | 5.43e-60 | 197 |
| MS.gene52368.t1 | AT5G61520 | 43.290 | 231 | 126 | 4 | 1 | 230 | 171 | 397 | 1.13e-59 | 195 |
| MS.gene52368.t1 | AT5G61520 | 43.290 | 231 | 126 | 4 | 1 | 230 | 219 | 445 | 2.67e-59 | 195 |
| MS.gene52368.t1 | AT5G26250 | 40.870 | 230 | 132 | 3 | 4 | 233 | 215 | 440 | 2.24e-58 | 192 |
| MS.gene52368.t1 | AT1G77210 | 39.056 | 233 | 137 | 5 | 1 | 232 | 68 | 296 | 3.97e-58 | 188 |
| MS.gene52368.t1 | AT1G77210 | 39.056 | 233 | 137 | 5 | 1 | 232 | 217 | 445 | 1.82e-56 | 187 |
| MS.gene52368.t1 | AT1G77210 | 39.056 | 233 | 137 | 5 | 1 | 232 | 217 | 445 | 1.82e-56 | 187 |
| MS.gene52368.t1 | AT1G07340 | 43.460 | 237 | 124 | 6 | 1 | 233 | 212 | 442 | 2.02e-55 | 184 |
| MS.gene52368.t1 | AT2G48020 | 28.879 | 232 | 152 | 5 | 3 | 231 | 195 | 416 | 1.30e-24 | 101 |
| MS.gene52368.t1 | AT2G48020 | 28.879 | 232 | 152 | 5 | 3 | 231 | 195 | 416 | 1.30e-24 | 101 |
| MS.gene52368.t1 | AT1G75220 | 29.515 | 227 | 158 | 1 | 4 | 230 | 216 | 440 | 2.12e-24 | 100 |
| MS.gene52368.t1 | AT3G05400 | 30.165 | 242 | 150 | 4 | 3 | 232 | 173 | 407 | 4.81e-24 | 99.8 |
| MS.gene52368.t1 | AT3G05400 | 30.165 | 242 | 150 | 4 | 3 | 232 | 193 | 427 | 6.59e-24 | 99.4 |
| MS.gene52368.t1 | AT5G27350 | 28.182 | 220 | 149 | 3 | 3 | 221 | 198 | 409 | 1.57e-21 | 92.8 |
| MS.gene52368.t1 | AT2G16120 | 28.000 | 250 | 161 | 4 | 1 | 233 | 198 | 445 | 2.57e-21 | 92.4 |
| MS.gene52368.t1 | AT2G16130 | 27.451 | 255 | 156 | 5 | 1 | 233 | 198 | 445 | 2.99e-21 | 92.0 |
| MS.gene52368.t1 | AT3G18830 | 25.498 | 251 | 163 | 5 | 1 | 232 | 208 | 453 | 4.23e-21 | 91.7 |
| MS.gene52368.t1 | AT1G54730 | 26.407 | 231 | 159 | 3 | 3 | 231 | 199 | 420 | 5.29e-21 | 90.9 |
| MS.gene52368.t1 | AT1G19450 | 27.753 | 227 | 162 | 1 | 4 | 230 | 217 | 441 | 5.86e-21 | 91.3 |
| MS.gene52368.t1 | AT1G54730 | 26.407 | 231 | 159 | 3 | 3 | 231 | 199 | 420 | 7.11e-21 | 90.9 |
| MS.gene52368.t1 | AT3G05160 | 26.977 | 215 | 146 | 3 | 3 | 215 | 139 | 344 | 9.73e-21 | 90.1 |
| MS.gene52368.t1 | AT3G05160 | 26.977 | 215 | 146 | 3 | 3 | 215 | 139 | 344 | 9.73e-21 | 90.1 |
| MS.gene52368.t1 | AT2G20780 | 27.234 | 235 | 152 | 5 | 7 | 233 | 233 | 456 | 1.04e-20 | 90.5 |
| MS.gene52368.t1 | AT3G05155 | 26.293 | 232 | 156 | 7 | 3 | 231 | 194 | 413 | 1.08e-20 | 90.5 |
| MS.gene52368.t1 | AT3G05160 | 26.977 | 215 | 146 | 3 | 3 | 215 | 188 | 393 | 1.37e-20 | 90.1 |
| MS.gene52368.t1 | AT2G20780 | 27.234 | 235 | 152 | 5 | 7 | 233 | 175 | 398 | 1.39e-20 | 90.1 |
| MS.gene52368.t1 | AT3G05165 | 27.778 | 216 | 145 | 3 | 2 | 215 | 196 | 402 | 1.84e-20 | 89.7 |
| MS.gene52368.t1 | AT3G05165 | 27.778 | 216 | 145 | 3 | 2 | 215 | 196 | 402 | 1.84e-20 | 89.7 |
| MS.gene52368.t1 | AT3G05165 | 27.778 | 216 | 145 | 3 | 2 | 215 | 196 | 402 | 1.84e-20 | 89.7 |
| MS.gene52368.t1 | AT3G05165 | 27.778 | 216 | 145 | 3 | 2 | 215 | 196 | 402 | 2.38e-20 | 89.4 |
| MS.gene52368.t1 | AT3G05165 | 26.724 | 232 | 159 | 3 | 2 | 231 | 196 | 418 | 2.39e-20 | 89.4 |
| MS.gene52368.t1 | AT3G05165 | 26.724 | 232 | 159 | 3 | 2 | 231 | 196 | 418 | 2.39e-20 | 89.4 |
| MS.gene52368.t1 | AT1G08900 | 29.384 | 211 | 140 | 3 | 6 | 215 | 153 | 355 | 1.76e-19 | 86.7 |
| MS.gene52368.t1 | AT1G08900 | 27.753 | 227 | 155 | 3 | 6 | 231 | 195 | 413 | 1.80e-19 | 86.7 |
| MS.gene52368.t1 | AT1G08900 | 29.384 | 211 | 140 | 3 | 6 | 215 | 187 | 389 | 2.22e-19 | 86.7 |
| MS.gene52368.t1 | AT1G08900 | 29.384 | 211 | 140 | 3 | 6 | 215 | 195 | 397 | 2.24e-19 | 86.7 |
| MS.gene52368.t1 | AT1G08900 | 29.384 | 211 | 140 | 3 | 6 | 215 | 195 | 397 | 2.24e-19 | 86.7 |
| MS.gene52368.t1 | AT2G18480 | 27.347 | 245 | 149 | 7 | 10 | 233 | 203 | 439 | 5.70e-19 | 85.5 |
| MS.gene52368.t1 | AT5G18840 | 24.576 | 236 | 156 | 4 | 4 | 231 | 212 | 433 | 7.14e-19 | 85.1 |
| MS.gene52368.t1 | AT1G08930 | 22.566 | 226 | 168 | 2 | 6 | 231 | 228 | 446 | 7.29e-19 | 85.1 |
| MS.gene52368.t1 | AT1G08930 | 22.566 | 226 | 168 | 2 | 6 | 231 | 228 | 446 | 7.29e-19 | 85.1 |
| MS.gene52368.t1 | AT5G27360 | 25.571 | 219 | 156 | 3 | 3 | 221 | 98 | 309 | 3.14e-18 | 82.8 |
| MS.gene52368.t1 | AT5G27360 | 25.571 | 219 | 156 | 3 | 3 | 221 | 98 | 309 | 3.14e-18 | 82.8 |
| MS.gene52368.t1 | AT5G27360 | 25.114 | 219 | 157 | 2 | 3 | 221 | 250 | 461 | 3.83e-18 | 83.2 |
| MS.gene52368.t1 | AT5G16150 | 26.050 | 238 | 155 | 5 | 1 | 233 | 277 | 498 | 3.88e-18 | 83.2 |
| MS.gene52368.t1 | AT5G16150 | 26.050 | 238 | 155 | 5 | 1 | 233 | 277 | 498 | 3.88e-18 | 83.2 |
| MS.gene52368.t1 | AT5G16150 | 26.050 | 238 | 155 | 5 | 1 | 233 | 277 | 498 | 3.88e-18 | 83.2 |
| MS.gene52368.t1 | AT5G27360 | 25.114 | 219 | 157 | 2 | 3 | 221 | 202 | 413 | 4.34e-18 | 82.8 |
| MS.gene52368.t1 | AT4G04750 | 25.108 | 231 | 158 | 4 | 6 | 231 | 206 | 426 | 6.66e-18 | 82.4 |
| MS.gene52368.t1 | AT4G04750 | 25.108 | 231 | 158 | 4 | 6 | 231 | 206 | 426 | 6.66e-18 | 82.4 |
| MS.gene52368.t1 | AT4G04750 | 25.108 | 231 | 158 | 4 | 6 | 231 | 250 | 470 | 7.06e-18 | 82.4 |
| MS.gene52368.t1 | AT4G04760 | 25.541 | 231 | 158 | 5 | 6 | 231 | 142 | 363 | 2.51e-17 | 80.5 |
| MS.gene52368.t1 | AT1G54730 | 25.328 | 229 | 143 | 3 | 3 | 231 | 199 | 399 | 2.57e-17 | 80.5 |
| MS.gene52368.t1 | AT4G04760 | 25.541 | 231 | 158 | 5 | 6 | 231 | 201 | 422 | 2.72e-17 | 80.5 |
| MS.gene52368.t1 | AT1G54730 | 25.328 | 229 | 143 | 3 | 3 | 231 | 199 | 399 | 3.24e-17 | 80.5 |
| MS.gene52368.t1 | AT5G17010 | 27.897 | 233 | 146 | 6 | 1 | 221 | 224 | 446 | 9.57e-17 | 79.0 |
| MS.gene52368.t1 | AT5G17010 | 27.897 | 233 | 146 | 6 | 1 | 221 | 224 | 446 | 9.57e-17 | 79.0 |
| MS.gene52368.t1 | AT5G17010 | 27.897 | 233 | 146 | 6 | 1 | 221 | 224 | 446 | 9.57e-17 | 79.0 |
| MS.gene52368.t1 | AT3G03090 | 29.412 | 204 | 129 | 5 | 22 | 221 | 254 | 446 | 1.60e-16 | 78.6 |
| MS.gene52368.t1 | AT2G48020 | 30.818 | 159 | 105 | 3 | 3 | 159 | 195 | 350 | 2.04e-16 | 77.8 |
| MS.gene52368.t1 | AT1G08890 | 26.540 | 211 | 146 | 3 | 6 | 215 | 197 | 399 | 2.29e-16 | 77.8 |
| MS.gene52368.t1 | AT4G36670 | 24.409 | 254 | 164 | 6 | 1 | 233 | 189 | 435 | 2.56e-16 | 77.8 |
| MS.gene52368.t1 | AT2G48020 | 29.710 | 138 | 94 | 1 | 3 | 140 | 195 | 329 | 1.89e-15 | 74.7 |
| MS.gene52368.t1 | AT1G30220 | 31.098 | 164 | 99 | 4 | 6 | 163 | 206 | 361 | 3.54e-15 | 74.7 |
| MS.gene52368.t1 | AT1G54730 | 26.108 | 203 | 139 | 3 | 3 | 203 | 199 | 392 | 3.98e-15 | 74.3 |
| MS.gene52368.t1 | AT1G54730 | 26.108 | 203 | 139 | 3 | 3 | 203 | 199 | 392 | 3.98e-15 | 74.3 |
| MS.gene52368.t1 | AT1G79820 | 26.106 | 226 | 155 | 4 | 7 | 232 | 232 | 445 | 2.74e-14 | 72.0 |
| MS.gene52368.t1 | AT1G79820 | 26.106 | 226 | 155 | 4 | 7 | 232 | 232 | 445 | 2.74e-14 | 72.0 |
| MS.gene52368.t1 | AT3G05150 | 27.350 | 234 | 152 | 7 | 4 | 231 | 203 | 424 | 3.44e-14 | 71.6 |
| MS.gene52368.t1 | AT3G05150 | 27.350 | 234 | 152 | 7 | 4 | 231 | 203 | 424 | 3.44e-14 | 71.6 |
| MS.gene52368.t1 | AT3G05150 | 27.350 | 234 | 152 | 7 | 4 | 231 | 203 | 424 | 3.50e-14 | 71.6 |
| MS.gene52368.t1 | AT4G04760 | 23.144 | 229 | 163 | 5 | 6 | 231 | 201 | 419 | 4.73e-14 | 71.2 |
| MS.gene52368.t1 | AT2G43330 | 23.729 | 236 | 161 | 6 | 7 | 233 | 210 | 435 | 6.15e-14 | 70.9 |
| MS.gene52368.t1 | AT1G08920 | 24.896 | 241 | 158 | 5 | 6 | 232 | 202 | 433 | 5.57e-13 | 68.2 |
| MS.gene52368.t1 | AT1G67300 | 24.576 | 236 | 147 | 8 | 1 | 225 | 223 | 438 | 9.40e-13 | 67.4 |
| MS.gene52368.t1 | AT1G79820 | 25.463 | 216 | 149 | 4 | 7 | 222 | 232 | 435 | 1.07e-12 | 67.0 |
| MS.gene52368.t1 | AT3G05155 | 26.812 | 138 | 95 | 2 | 3 | 140 | 194 | 325 | 1.59e-12 | 66.2 |
| MS.gene52368.t1 | AT1G54730 | 27.536 | 138 | 97 | 1 | 3 | 140 | 199 | 333 | 2.09e-12 | 65.9 |
| MS.gene52368.t1 | AT1G67300 | 25.424 | 236 | 144 | 8 | 1 | 225 | 223 | 437 | 2.19e-12 | 66.2 |
| MS.gene52368.t1 | AT1G67300 | 25.424 | 236 | 144 | 8 | 1 | 225 | 223 | 437 | 2.19e-12 | 66.2 |
| MS.gene52368.t1 | AT3G20460 | 25.328 | 229 | 164 | 3 | 3 | 231 | 220 | 441 | 2.22e-12 | 66.2 |
| MS.gene52368.t1 | AT1G08920 | 24.528 | 212 | 149 | 4 | 6 | 215 | 202 | 404 | 4.77e-12 | 65.1 |
| MS.gene52368.t1 | AT1G08920 | 24.194 | 248 | 158 | 5 | 6 | 232 | 202 | 440 | 5.31e-12 | 65.1 |
| MS.gene52368.t1 | AT4G16480 | 26.250 | 160 | 108 | 4 | 8 | 158 | 207 | 365 | 1.01e-11 | 64.3 |
| MS.gene52368.t1 | AT4G16480 | 26.250 | 160 | 108 | 4 | 8 | 158 | 207 | 365 | 1.01e-11 | 64.3 |
| MS.gene52368.t1 | AT4G16480 | 26.250 | 160 | 108 | 4 | 8 | 158 | 207 | 365 | 1.01e-11 | 64.3 |
| MS.gene52368.t1 | AT1G54730 | 28.319 | 113 | 81 | 0 | 3 | 115 | 199 | 311 | 1.23e-11 | 63.5 |
| MS.gene52368.t1 | AT1G54730 | 28.319 | 113 | 81 | 0 | 3 | 115 | 199 | 311 | 1.23e-11 | 63.5 |
| MS.gene52368.t1 | AT5G27360 | 22.222 | 207 | 154 | 2 | 3 | 209 | 202 | 401 | 1.47e-11 | 63.9 |
| MS.gene52368.t1 | AT1G54730 | 24.876 | 201 | 123 | 3 | 3 | 203 | 199 | 371 | 1.79e-11 | 63.5 |
| MS.gene52368.t1 | AT5G59250 | 26.210 | 248 | 152 | 9 | 1 | 228 | 275 | 511 | 3.83e-11 | 62.8 |
Find 59 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGTGGTTCTTATATTTAC+AGG | 0.188974 | 3.1:-60924612 | None:intergenic |
| CCTTTAAGACCATATTAAAA+AGG | 0.238402 | 3.1:+60924062 | MS.gene52368:CDS |
| TGTTTATACTCTGCTGGTTT+TGG | 0.264387 | 3.1:+60924543 | MS.gene52368:CDS |
| CTCTTCCATTCTGTGGGCTT+GGG | 0.308466 | 3.1:+60924175 | MS.gene52368:CDS |
| TCTCTTCCATTCTGTGGGCT+TGG | 0.312953 | 3.1:+60924174 | MS.gene52368:CDS |
| CGAAGAATCTTGTTCATAAC+CGG | 0.330741 | 3.1:+60924289 | MS.gene52368:CDS |
| CTATTATGTTTATACTCTGC+TGG | 0.362807 | 3.1:+60924537 | MS.gene52368:CDS |
| CATTATGATGTTTGTCTGCT+TGG | 0.369746 | 3.1:+60924315 | MS.gene52368:CDS |
| TTAATTTCTGCCATTGTACT+TGG | 0.400667 | 3.1:+60924211 | MS.gene52368:CDS |
| GCAGTGGTGTCTGGTGTTGA+TGG | 0.402312 | 3.1:+60924471 | MS.gene52368:CDS |
| AAAGCCTTACGCAAAATTAG+AGG | 0.410530 | 3.1:+60923962 | MS.gene52368:CDS |
| CCACGTTCGACTAAGCTGTT+GGG | 0.414673 | 3.1:-60923920 | None:intergenic |
| CCCACAGAATGGAAGAGATT+AGG | 0.430797 | 3.1:-60924169 | None:intergenic |
| CCTAATCTCTTCCATTCTGT+GGG | 0.435539 | 3.1:+60924169 | MS.gene52368:CDS |
| TCCTAATCTCTTCCATTCTG+TGG | 0.440720 | 3.1:+60924168 | MS.gene52368:CDS |
| ACCAAATCGGTCAACAAAAC+CGG | 0.441925 | 3.1:-60924266 | None:intergenic |
| ACCACGTTCGACTAAGCTGT+TGG | 0.458442 | 3.1:-60923921 | None:intergenic |
| TGTTGATACCGGTAAGTTGT+TGG | 0.464630 | 3.1:-60924129 | None:intergenic |
| GTGTCTAACCTTATCTCTGC+CGG | 0.472009 | 3.1:+60924247 | MS.gene52368:CDS |
| GGTCGTGGGGCCCTCTAACA+TGG | 0.478479 | 3.1:+60924568 | MS.gene52368:CDS |
| CTGTGGTTCTTATATTTACA+GGG | 0.480105 | 3.1:-60924611 | None:intergenic |
| TACTAATATTGCATTCCCCT+TGG | 0.480612 | 3.1:-60924508 | None:intergenic |
| ATTGTGCTAGCAGTGGTGTC+TGG | 0.481749 | 3.1:+60924462 | MS.gene52368:CDS |
| CAACAAAACCGGCAGAGATA+AGG | 0.483806 | 3.1:-60924255 | None:intergenic |
| CCGGTAAGTTGTTGGAAAAG+TGG | 0.489077 | 3.1:-60924121 | None:intergenic |
| CCTGCAGTTGTAATGACAAT+TGG | 0.493710 | 3.1:+60923875 | None:intergenic |
| CGGTAAGTTGTTGGAAAAGT+GGG | 0.494424 | 3.1:-60924120 | None:intergenic |
| CTTGGAATAAGCCATGTTAG+AGG | 0.494856 | 3.1:-60924579 | None:intergenic |
| ACAAGATTCTTCGACCAAAT+CGG | 0.499677 | 3.1:-60924279 | None:intergenic |
| AATAGCTATGCTTTGTCCTG+TGG | 0.505069 | 3.1:-60924628 | None:intergenic |
| TTAATAAGTTCTTCTAACTC+AGG | 0.509188 | 3.1:-60924004 | None:intergenic |
| GAAAGCGACGATGTTGATAC+CGG | 0.516201 | 3.1:-60924140 | None:intergenic |
| GGGGAATGCAATATTAGTAT+TGG | 0.522711 | 3.1:+60924512 | MS.gene52368:CDS |
| AATTGGTTCCTTCCTCATAA+CGG | 0.526052 | 3.1:+60923892 | MS.gene52368:CDS |
| CACGTTCGACTAAGCTGTTG+GGG | 0.538498 | 3.1:-60923919 | None:intergenic |
| AAGGGAGTATCGACCTCACT+TGG | 0.556645 | 3.1:+60924081 | MS.gene52368:CDS |
| TTTACAGGGAAAATCTCACT+TGG | 0.566699 | 3.1:-60924597 | None:intergenic |
| CATGTCCCAAGCCCACAGAA+TGG | 0.569588 | 3.1:-60924180 | None:intergenic |
| CCTGTAAATATAAGAACCAC+AGG | 0.573263 | 3.1:+60924612 | MS.gene52368:CDS |
| TCTGTGGGCTTGGGACATGA+CGG | 0.580489 | 3.1:+60924184 | MS.gene52368:CDS |
| TTGGAATAAGCCATGTTAGA+GGG | 0.596308 | 3.1:-60924578 | None:intergenic |
| GAAGAATCTTGTTCATAACC+GGG | 0.599176 | 3.1:+60924290 | MS.gene52368:CDS |
| GACAAACATCATAATGCCCC+CGG | 0.601203 | 3.1:-60924308 | None:intergenic |
| GTATCGACCTCACTTGGTGA+TGG | 0.602567 | 3.1:+60924087 | MS.gene52368:CDS |
| TAACTCAGGTTCAATATCAA+CGG | 0.603300 | 3.1:-60923990 | None:intergenic |
| TGGTACAAATGACATATCCA+AGG | 0.605738 | 3.1:+60924491 | MS.gene52368:CDS |
| GCAAATGCCATCACCAAGTG+AGG | 0.611968 | 3.1:-60924094 | None:intergenic |
| CAGAGATAAGGTTAGACACA+AGG | 0.612076 | 3.1:-60924243 | None:intergenic |
| AAGGTTAGACACAAGGCTAA+CGG | 0.616354 | 3.1:-60924236 | None:intergenic |
| GGTACAAATGACATATCCAA+GGG | 0.626581 | 3.1:+60924492 | MS.gene52368:CDS |
| AAGAATCTTGTTCATAACCG+GGG | 0.636667 | 3.1:+60924291 | MS.gene52368:CDS |
| CCCAACAGCTTAGTCGAACG+TGG | 0.654800 | 3.1:+60923920 | MS.gene52368:CDS |
| AGAATCTTGTTCATAACCGG+GGG | 0.669322 | 3.1:+60924292 | MS.gene52368:CDS |
| CTCAGGTTCAATATCAACGG+AGG | 0.672066 | 3.1:-60923987 | None:intergenic |
| TGTGTCCATTGTGCTAGCAG+TGG | 0.678099 | 3.1:+60924455 | MS.gene52368:CDS |
| AGACACCACTGCTAGCACAA+TGG | 0.679999 | 3.1:-60924460 | None:intergenic |
| GCTAACGGATCCAAGTACAA+TGG | 0.704332 | 3.1:-60924221 | None:intergenic |
| ACGTTCGACTAAGCTGTTGG+GGG | 0.743564 | 3.1:-60923918 | None:intergenic |
| GTACAAATGACATATCCAAG+GGG | 0.751900 | 3.1:+60924493 | MS.gene52368:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTAATAAATAGATAGTT+AGG | - | chr3.1:60924356-60924375 | None:intergenic | 10.0% |
| !! | ACACAAACAATTTAATTAGT+AGG | - | chr3.1:60924417-60924436 | None:intergenic | 20.0% |
| !!! | CTTTAAGACCATATTAAAAA+GGG | + | chr3.1:60924063-60924082 | MS.gene52368:CDS | 20.0% |
| !!! | CTTTTTAATATGGTCTTAAA+GGG | - | chr3.1:60924064-60924083 | None:intergenic | 20.0% |
| ! | TTAATAAGTTCTTCTAACTC+AGG | - | chr3.1:60924007-60924026 | None:intergenic | 25.0% |
| !!! | CCTTTAAGACCATATTAAAA+AGG | + | chr3.1:60924062-60924081 | MS.gene52368:CDS | 25.0% |
| !!! | CCTTTTTAATATGGTCTTAA+AGG | - | chr3.1:60924065-60924084 | None:intergenic | 25.0% |
| CTATTATGTTTATACTCTGC+TGG | + | chr3.1:60924537-60924556 | MS.gene52368:CDS | 30.0% | |
| CTGTGGTTCTTATATTTACA+GGG | - | chr3.1:60924614-60924633 | None:intergenic | 30.0% | |
| TAACTCAGGTTCAATATCAA+CGG | - | chr3.1:60923993-60924012 | None:intergenic | 30.0% | |
| TTAATTTCTGCCATTGTACT+TGG | + | chr3.1:60924211-60924230 | MS.gene52368:CDS | 30.0% | |
| ! | AATTTTGCGTAAGGCTTTTT+TGG | - | chr3.1:60923960-60923979 | None:intergenic | 30.0% |
| ! | TCGATACTCCCTTTTTAATA+TGG | - | chr3.1:60924074-60924093 | None:intergenic | 30.0% |
| AAAGCCTTACGCAAAATTAG+AGG | + | chr3.1:60923962-60923981 | MS.gene52368:CDS | 35.0% | |
| AAGAATCTTGTTCATAACCG+GGG | + | chr3.1:60924291-60924310 | MS.gene52368:CDS | 35.0% | |
| ACAAGATTCTTCGACCAAAT+CGG | - | chr3.1:60924282-60924301 | None:intergenic | 35.0% | |
| CATTATGATGTTTGTCTGCT+TGG | + | chr3.1:60924315-60924334 | MS.gene52368:CDS | 35.0% | |
| CCTGTAAATATAAGAACCAC+AGG | + | chr3.1:60924612-60924631 | MS.gene52368:CDS | 35.0% | |
| CCTGTGGTTCTTATATTTAC+AGG | - | chr3.1:60924615-60924634 | None:intergenic | 35.0% | |
| CGAAGAATCTTGTTCATAAC+CGG | + | chr3.1:60924289-60924308 | MS.gene52368:CDS | 35.0% | |
| GAAGAATCTTGTTCATAACC+GGG | + | chr3.1:60924290-60924309 | MS.gene52368:CDS | 35.0% | |
| GGGGAATGCAATATTAGTAT+TGG | + | chr3.1:60924512-60924531 | MS.gene52368:CDS | 35.0% | |
| GGTACAAATGACATATCCAA+GGG | + | chr3.1:60924492-60924511 | MS.gene52368:CDS | 35.0% | |
| GTACAAATGACATATCCAAG+GGG | + | chr3.1:60924493-60924512 | MS.gene52368:CDS | 35.0% | |
| TACTAATATTGCATTCCCCT+TGG | - | chr3.1:60924511-60924530 | None:intergenic | 35.0% | |
| TGGTACAAATGACATATCCA+AGG | + | chr3.1:60924491-60924510 | MS.gene52368:CDS | 35.0% | |
| TTGGAATAAGCCATGTTAGA+GGG | - | chr3.1:60924581-60924600 | None:intergenic | 35.0% | |
| TTTACAGGGAAAATCTCACT+TGG | - | chr3.1:60924600-60924619 | None:intergenic | 35.0% | |
| ! | AATTGGTTCCTTCCTCATAA+CGG | + | chr3.1:60923892-60923911 | MS.gene52368:CDS | 35.0% |
| !!! | TGTTTATACTCTGCTGGTTT+TGG | + | chr3.1:60924543-60924562 | MS.gene52368:CDS | 35.0% |
| AAGGTTAGACACAAGGCTAA+CGG | - | chr3.1:60924239-60924258 | None:intergenic | 40.0% | |
| AATAGCTATGCTTTGTCCTG+TGG | - | chr3.1:60924631-60924650 | None:intergenic | 40.0% | |
| ACCAAATCGGTCAACAAAAC+CGG | - | chr3.1:60924269-60924288 | None:intergenic | 40.0% | |
| AGAATCTTGTTCATAACCGG+GGG | + | chr3.1:60924292-60924311 | MS.gene52368:CDS | 40.0% | |
| CAGAGATAAGGTTAGACACA+AGG | - | chr3.1:60924246-60924265 | None:intergenic | 40.0% | |
| CCTAATCTCTTCCATTCTGT+GGG | + | chr3.1:60924169-60924188 | MS.gene52368:CDS | 40.0% | |
| CGGTAAGTTGTTGGAAAAGT+GGG | - | chr3.1:60924123-60924142 | None:intergenic | 40.0% | |
| CTTGGAATAAGCCATGTTAG+AGG | - | chr3.1:60924582-60924601 | None:intergenic | 40.0% | |
| TCCTAATCTCTTCCATTCTG+TGG | + | chr3.1:60924168-60924187 | MS.gene52368:CDS | 40.0% | |
| TGTTGATACCGGTAAGTTGT+TGG | - | chr3.1:60924132-60924151 | None:intergenic | 40.0% | |
| ! | GGATCCTCTAATTTTGCGTA+AGG | - | chr3.1:60923969-60923988 | None:intergenic | 40.0% |
| !! | CCACTTTTCCAACAACTTAC+CGG | + | chr3.1:60924121-60924140 | MS.gene52368:CDS | 40.0% |
| !!! | TATACTCTGCTGGTTTTGGT+TGG | + | chr3.1:60924547-60924566 | MS.gene52368:CDS | 40.0% |
| CAACAAAACCGGCAGAGATA+AGG | - | chr3.1:60924258-60924277 | None:intergenic | 45.0% | |
| CCCACAGAATGGAAGAGATT+AGG | - | chr3.1:60924172-60924191 | None:intergenic | 45.0% | |
| CCGGTAAGTTGTTGGAAAAG+TGG | - | chr3.1:60924124-60924143 | None:intergenic | 45.0% | |
| CTCAGGTTCAATATCAACGG+AGG | - | chr3.1:60923990-60924009 | None:intergenic | 45.0% | |
| GAAAGCGACGATGTTGATAC+CGG | - | chr3.1:60924143-60924162 | None:intergenic | 45.0% | |
| GACAAACATCATAATGCCCC+CGG | - | chr3.1:60924311-60924330 | None:intergenic | 45.0% | |
| GTGTCTAACCTTATCTCTGC+CGG | + | chr3.1:60924247-60924266 | MS.gene52368:CDS | 45.0% | |
| ! | GCTAACGGATCCAAGTACAA+TGG | - | chr3.1:60924224-60924243 | None:intergenic | 45.0% |
| ACCACGTTCGACTAAGCTGT+TGG | - | chr3.1:60923924-60923943 | None:intergenic | 50.0% | |
| ACGTTCGACTAAGCTGTTGG+GGG | - | chr3.1:60923921-60923940 | None:intergenic | 50.0% | |
| AGACACCACTGCTAGCACAA+TGG | - | chr3.1:60924463-60924482 | None:intergenic | 50.0% | |
| ATTGTGCTAGCAGTGGTGTC+TGG | + | chr3.1:60924462-60924481 | MS.gene52368:CDS | 50.0% | |
| CACGTTCGACTAAGCTGTTG+GGG | - | chr3.1:60923922-60923941 | None:intergenic | 50.0% | |
| CCACGTTCGACTAAGCTGTT+GGG | - | chr3.1:60923923-60923942 | None:intergenic | 50.0% | |
| CTCTTCCATTCTGTGGGCTT+GGG | + | chr3.1:60924175-60924194 | MS.gene52368:CDS | 50.0% | |
| GCAAATGCCATCACCAAGTG+AGG | - | chr3.1:60924097-60924116 | None:intergenic | 50.0% | |
| TCTCTTCCATTCTGTGGGCT+TGG | + | chr3.1:60924174-60924193 | MS.gene52368:CDS | 50.0% | |
| TGTGTCCATTGTGCTAGCAG+TGG | + | chr3.1:60924455-60924474 | MS.gene52368:CDS | 50.0% | |
| ! | GTATCGACCTCACTTGGTGA+TGG | + | chr3.1:60924087-60924106 | MS.gene52368:CDS | 50.0% |
| !! | AAGGGAGTATCGACCTCACT+TGG | + | chr3.1:60924081-60924100 | MS.gene52368:CDS | 50.0% |
| !!! | GCCGGTTTTGTTGACCGATT+TGG | + | chr3.1:60924265-60924284 | MS.gene52368:CDS | 50.0% |
| !!! | TGCTGGTTTTGGTTGGTCGT+GGG | + | chr3.1:60924554-60924573 | MS.gene52368:CDS | 50.0% |
| CATGTCCCAAGCCCACAGAA+TGG | - | chr3.1:60924183-60924202 | None:intergenic | 55.0% | |
| CCCAACAGCTTAGTCGAACG+TGG | + | chr3.1:60923920-60923939 | MS.gene52368:CDS | 55.0% | |
| TCTGTGGGCTTGGGACATGA+CGG | + | chr3.1:60924184-60924203 | MS.gene52368:CDS | 55.0% | |
| ! | GCAGTGGTGTCTGGTGTTGA+TGG | + | chr3.1:60924471-60924490 | MS.gene52368:CDS | 55.0% |
| !! | TGTTGGGGGTGTCCGTTATG+AGG | - | chr3.1:60923907-60923926 | None:intergenic | 55.0% |
| !!! | CTGCTGGTTTTGGTTGGTCG+TGG | + | chr3.1:60924553-60924572 | MS.gene52368:CDS | 55.0% |
| !!! | GCTGGTTTTGGTTGGTCGTG+GGG | + | chr3.1:60924555-60924574 | MS.gene52368:CDS | 55.0% |
| !! | GGGGGTGTCCGTTATGAGGA+AGG | - | chr3.1:60923903-60923922 | None:intergenic | 60.0% |
| GGTCGTGGGGCCCTCTAACA+TGG | + | chr3.1:60924568-60924587 | MS.gene52368:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 60923887 | 60924700 | 60923887 | ID=MS.gene52368 |
| chr3.1 | mRNA | 60923887 | 60924700 | 60923887 | ID=MS.gene52368.t1;Parent=MS.gene52368 |
| chr3.1 | exon | 60923887 | 60924336 | 60923887 | ID=MS.gene52368.t1.exon1;Parent=MS.gene52368.t1 |
| chr3.1 | CDS | 60923887 | 60924336 | 60923887 | ID=cds.MS.gene52368.t1;Parent=MS.gene52368.t1 |
| chr3.1 | exon | 60924450 | 60924700 | 60924450 | ID=MS.gene52368.t1.exon2;Parent=MS.gene52368.t1 |
| chr3.1 | CDS | 60924450 | 60924700 | 60924450 | ID=cds.MS.gene52368.t1;Parent=MS.gene52368.t1 |
| Gene Sequence |
| Protein sequence |
