AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63320


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63320.t1 MTR_3g067940 94.280 507 1 2 1 507 1 479 0.0 962
MS.gene63320.t1 MTR_4g102510 60.043 463 152 7 48 507 43 475 0.0 537
MS.gene63320.t1 MTR_3g051690 42.384 453 207 10 57 494 33 446 9.43e-115 347
MS.gene63320.t1 MTR_5g008010 44.018 443 200 9 51 484 26 429 2.18e-114 345
MS.gene63320.t1 MTR_7g106870 49.415 342 157 6 157 486 96 433 1.32e-110 336
MS.gene63320.t1 MTR_7g451830 45.507 345 167 5 156 492 92 423 2.50e-101 311
MS.gene63320.t1 MTR_7g047640 45.507 345 167 5 156 492 92 423 2.50e-101 311
MS.gene63320.t1 MTR_7g034625 48.366 306 148 4 191 486 17 322 6.56e-100 304
MS.gene63320.t1 MTR_7g053100 47.352 321 153 6 192 496 112 432 4.52e-97 300
MS.gene63320.t1 MTR_7g057540 50.165 303 140 5 192 484 104 405 5.91e-96 297
MS.gene63320.t1 MTR_7g055590 50.165 303 140 5 192 484 104 405 3.65e-95 297
MS.gene63320.t1 MTR_2g060710 36.207 464 246 11 57 507 26 452 4.56e-92 288
MS.gene63320.t1 MTR_2g100460 36.254 331 182 5 190 507 72 386 4.57e-63 211
MS.gene63320.t1 MTR_2g100540 36.977 311 157 9 190 492 102 381 1.22e-48 172
MS.gene63320.t1 MTR_7g086360 23.113 212 157 3 276 485 48 255 2.15e-14 74.7
MS.gene63320.t1 MTR_5g016370 24.126 286 164 10 206 483 312 552 1.57e-13 73.6
MS.gene63320.t1 MTR_1g054300 24.521 261 180 10 224 481 235 481 2.44e-13 72.4
MS.gene63320.t1 MTR_6g004040 26.708 161 112 3 239 397 57 213 1.15e-12 70.9
MS.gene63320.t1 MTR_4g415070 52.830 53 25 0 432 484 55 107 2.01e-12 68.6
MS.gene63320.t1 MTR_8g038550 24.719 267 183 10 244 501 186 443 2.57e-12 69.7
MS.gene63320.t1 MTR_3g106080 25.414 181 128 4 220 398 441 616 1.73e-11 67.0
MS.gene63320.t1 MTR_2g086140 27.854 219 115 8 254 433 24 238 2.35e-11 67.0
MS.gene63320.t1 MTR_4g095058 24.000 250 174 9 244 483 292 535 3.32e-11 66.2
MS.gene63320.t1 MTR_4g095058 24.000 250 174 9 244 483 290 533 3.74e-11 65.9
MS.gene63320.t1 MTR_1g072140 25.263 190 134 6 295 482 41 224 3.79e-11 64.7
MS.gene63320.t1 MTR_2g012630 27.094 203 128 6 209 397 16 212 5.88e-11 65.9
MS.gene63320.t1 MTR_2g012630 27.094 203 128 6 209 397 16 212 6.16e-11 65.5
MS.gene63320.t1 MTR_5g016350 24.126 286 164 11 206 483 300 540 8.22e-11 64.7
MS.gene63320.t1 MTR_4g119620 25.991 227 133 9 277 482 21 233 9.75e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63320.t1 AT5G13840 76.125 511 88 7 1 507 1 481 0.0 714
MS.gene63320.t1 AT5G13840 76.125 511 88 7 1 507 1 481 0.0 714
MS.gene63320.t1 AT4G22910 59.560 455 149 6 56 507 61 483 0.0 534
MS.gene63320.t1 AT4G11920 59.657 466 147 7 48 507 45 475 0.0 518
MS.gene63320.t1 AT4G33260 41.871 449 206 8 49 484 16 422 1.77e-111 338
MS.gene63320.t1 AT4G33270 41.722 453 201 9 49 484 26 432 1.34e-110 336
MS.gene63320.t1 AT5G27570 51.815 303 137 3 191 484 122 424 7.23e-108 329
MS.gene63320.t1 AT4G33260 40.757 449 211 8 49 484 16 422 9.10e-106 323
MS.gene63320.t1 AT5G27080 50.495 303 141 3 191 484 114 416 1.73e-105 322
MS.gene63320.t1 AT5G26900 45.833 336 154 4 157 484 103 418 1.29e-102 315
MS.gene63320.t1 AT5G27945 47.855 303 149 4 190 484 101 402 1.24e-92 289
MS.gene63320.t1 AT5G13480 25.000 296 203 11 218 502 85 372 4.72e-15 78.6
MS.gene63320.t1 AT5G13480 25.000 296 203 11 218 502 85 372 6.10e-15 78.2
MS.gene63320.t1 AT5G13480 25.000 296 203 11 218 502 108 395 6.22e-15 78.2
MS.gene63320.t1 AT5G13480 25.000 296 203 11 218 502 97 384 8.07e-15 77.8
MS.gene63320.t1 AT5G52820 26.848 257 168 10 231 482 231 472 8.92e-15 77.0
MS.gene63320.t1 AT2G43770 23.364 214 154 5 276 485 46 253 3.37e-14 74.3
MS.gene63320.t1 AT5G23430 27.528 178 122 4 222 397 41 213 4.58e-14 75.5
MS.gene63320.t1 AT5G23430 27.528 178 122 4 222 397 41 213 4.66e-14 75.5
MS.gene63320.t1 AT5G23430 27.528 178 122 4 222 397 41 213 4.66e-14 75.5
MS.gene63320.t1 AT5G08390 26.966 178 123 4 222 397 41 213 6.39e-14 75.1
MS.gene63320.t1 AT3G49660 25.893 224 135 8 277 483 18 227 1.17e-13 72.4
MS.gene63320.t1 AT3G49660 22.581 248 183 5 239 481 69 312 4.83e-12 67.4
MS.gene63320.t1 AT1G61210 26.257 179 123 5 222 397 40 212 2.79e-12 70.1
MS.gene63320.t1 AT1G61210 26.257 179 123 5 222 397 40 212 2.82e-12 70.1
MS.gene63320.t1 AT1G61210 26.257 179 123 5 222 397 40 212 2.85e-12 70.1
MS.gene63320.t1 AT1G11160 27.933 179 120 5 222 397 40 212 3.35e-12 69.7
MS.gene63320.t1 AT1G11160 27.933 179 120 5 222 397 40 212 3.55e-12 69.7
MS.gene63320.t1 AT1G11160 27.933 179 120 5 222 397 40 212 3.62e-12 69.7
MS.gene63320.t1 AT4G35370 26.230 183 87 6 244 400 219 379 4.31e-12 68.6
MS.gene63320.t1 AT3G18130 27.344 256 156 8 252 483 74 323 4.37e-12 67.8
MS.gene63320.t1 AT1G11160 27.564 156 107 3 244 397 19 170 6.48e-12 68.9
MS.gene63320.t1 AT3G44530 27.313 227 124 7 244 433 16 238 1.03e-11 68.2
MS.gene63320.t1 AT5G25150 24.747 198 142 5 213 408 433 625 1.09e-11 67.8
MS.gene63320.t1 AT3G44530 27.313 227 124 7 244 433 16 238 1.12e-11 68.2
MS.gene63320.t1 AT5G25150 24.747 198 142 5 213 408 433 625 1.17e-11 67.8
MS.gene63320.t1 AT1G15440 28.977 176 119 3 316 489 381 552 2.43e-11 67.0
MS.gene63320.t1 AT5G43920 25.140 179 125 3 311 483 211 386 2.48e-11 66.6
MS.gene63320.t1 AT1G15440 28.977 176 119 3 316 489 341 512 2.49e-11 67.0

Find 140 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCATGGAATTCTCGCATTT+TGG 0.202786 3.3:-60082486 MS.gene63320:CDS
CTGATCGGTGTATTCGTTTC+TGG 0.223974 3.3:-60081991 MS.gene63320:CDS
GGGATGAGACTCTGCGGTTT+TGG 0.238154 3.3:-60081432 MS.gene63320:CDS
TGCTTATGAATCATCTGATT+TGG 0.243659 3.3:+60081248 None:intergenic
CAAAGGCCTGTATCTTTAAC+TGG 0.271405 3.3:+60081286 None:intergenic
CAGAGCAACCTTCTCGTATC+TGG 0.287630 3.3:-60082025 MS.gene63320:CDS
AATTAGGTTGCAACTCTAAC+TGG 0.295863 3.3:-60081631 MS.gene63320:intron
AATATCGAAGGCGAAGAAAA+AGG 0.319187 3.3:+60083766 None:intergenic
TTGGCACTTGTGTTTATCTC+TGG 0.333779 3.3:-60082875 MS.gene63320:CDS
GCTTATGAATCATCTGATTT+GGG 0.337855 3.3:+60081249 None:intergenic
AGGGTTCCAAGCGACTTTAT+TGG 0.361219 3.3:-60082422 MS.gene63320:CDS
CTTGCCTTGTGGGGTGTCTT+GGG 0.375928 3.3:+60083682 None:intergenic
GGAACTTTCCTAGGAGGCTT+AGG 0.390050 3.3:+60083703 None:intergenic
TCTCCTTCTTCTTCTCCTGC+AGG 0.390074 3.3:-60083868 MS.gene63320:CDS
TCATTACTCCCTTCTTTAAC+CGG 0.390491 3.3:+60083940 None:intergenic
GACTTTATTGGCAAGCTTGT+CGG 0.390886 3.3:-60082410 MS.gene63320:CDS
ACTTGCCTTGTGGGGTGTCT+TGG 0.391242 3.3:+60083681 None:intergenic
TCGATATTTGGAAGAAATGA+TGG 0.394918 3.3:-60083751 MS.gene63320:CDS
GGTGTCTTGGGAACTTTCCT+AGG 0.397288 3.3:+60083694 None:intergenic
TCTTCTTCTCCTGCAGGTTG+TGG 0.401970 3.3:-60083862 MS.gene63320:CDS
CCTTCAACTTGACAGGTTTG+TGG 0.403871 3.3:-60082290 MS.gene63320:intron
TCTCCTGCAGGTTGTGGTGT+TGG 0.409448 3.3:-60083856 MS.gene63320:CDS
GATGACCGGGAACTTGCTTC+TGG 0.413514 3.3:-60082251 MS.gene63320:CDS
GTTATTGTTGACATCCCTGC+TGG 0.415431 3.3:+60084135 None:intergenic
CTCTGTTGACACTGGAAGCC+AGG 0.417288 3.3:-60081942 MS.gene63320:intron
TTCTGGTGGTAATGATAATC+AGG 0.417463 3.3:-60082234 MS.gene63320:intron
TACCACCAGAAGCAAGTTCC+CGG 0.418042 3.3:+60082246 None:intergenic
TGCAGGTGTGTAACCTTGCT+TGG 0.418904 3.3:-60081841 MS.gene63320:intron
GGATGGTACTAAATGCAAAA+AGG 0.422280 3.3:-60082549 MS.gene63320:CDS
TGCAATGTCTCCTGATGGTC+AGG 0.422711 3.3:-60081584 MS.gene63320:intron
TTTACTTGAATCTTGTGGAT+TGG 0.423069 3.3:-60082926 MS.gene63320:CDS
TACAAACGGTGGTCAAGTTC+AGG 0.428094 3.3:-60082666 MS.gene63320:intron
GCACGAGGCGAAGCGGAAGA+AGG 0.429921 3.3:+60084081 None:intergenic
GGAGTAATGAGGCTTATAAT+AGG 0.434256 3.3:-60083927 MS.gene63320:CDS
CAGTGTCAACAGAGTTCAAT+TGG 0.437042 3.3:+60081951 None:intergenic
CTACTCCTCCTAAGCCTCCT+AGG 0.441271 3.3:-60083711 MS.gene63320:CDS
CGTTTCTGGAACACGACAAA+TGG 0.442087 3.3:-60081977 MS.gene63320:CDS
ACTCTCAACAACCAACTTTG+AGG 0.442538 3.3:-60082096 MS.gene63320:CDS
GGAGGGCATCAAACAAGAAC+TGG 0.464093 3.3:-60082515 MS.gene63320:CDS
GATACAGGCCTTTGGTCACT+AGG 0.464727 3.3:-60081277 MS.gene63320:CDS
CAGGCCCCAGTTAAAGATAC+AGG 0.466060 3.3:-60081292 MS.gene63320:CDS
GAAGAAGGAGAAGCAAAATC+AGG 0.474147 3.3:+60083880 None:intergenic
TCAAACAAGAACTGGTGTCT+TGG 0.477919 3.3:-60082507 MS.gene63320:CDS
CAGACAATAGTGACTGGTGC+TGG 0.478559 3.3:-60081454 MS.gene63320:CDS
TTCATATCCATTGGTACAAA+CGG 0.479950 3.3:-60082680 MS.gene63320:CDS
CACGAGGCGAAGCGGAAGAA+GGG 0.481206 3.3:+60084082 None:intergenic
AATAATACCTTTGCTAGTGA+TGG 0.483310 3.3:+60081749 None:intergenic
TTGACCACCGTTTGTACCAA+TGG 0.487746 3.3:+60082673 None:intergenic
TCCCTTCTTTAACCGGTGAC+TGG 0.494990 3.3:+60083947 None:intergenic
TGTGACTTGGGACCTTATGA+TGG 0.495508 3.3:-60082737 MS.gene63320:CDS
GACAGGTTTGTGGATTGAAA+TGG 0.496996 3.3:-60082280 MS.gene63320:intron
TCTTCAAGACTGCATACATT+CGG 0.497264 3.3:-60083982 MS.gene63320:CDS
GGTGACTAAGCTGTGTGACT+TGG 0.498148 3.3:-60082750 MS.gene63320:CDS
AGCAAGTTCCCGGTCATCAC+AGG 0.498721 3.3:+60082256 None:intergenic
TGGACATTTACCTGACCATC+AGG 0.499399 3.3:+60081574 None:intergenic
GGATATGAAGGAACCCTCCT+TGG 0.504932 3.3:+60082694 None:intergenic
TGGCTTCAGGAAGCAGGGAT+AGG 0.505574 3.3:-60082466 MS.gene63320:CDS
CAGTTAAAGATACAGGCCTT+TGG 0.507215 3.3:-60081285 MS.gene63320:CDS
TCAGGTCTAAACCTCCCAGC+AGG 0.508097 3.3:-60084150 MS.gene63320:CDS
GAGGGTTCCTTCATATCCAT+TGG 0.508547 3.3:-60082689 MS.gene63320:CDS
AGCTTGCCAATAAAGTCGCT+TGG 0.510546 3.3:+60082416 None:intergenic
AACCAGTCACCGGTTAAAGA+AGG 0.514252 3.3:-60083949 MS.gene63320:CDS
AACCTCAACATATTCTTACT+CGG 0.518937 3.3:+60083817 None:intergenic
TGAAATGGTCCTGTGATGAC+CGG 0.522032 3.3:-60082265 MS.gene63320:CDS
CGATATTTGGAAGAAATGAT+GGG 0.526164 3.3:-60083750 MS.gene63320:CDS
TATATGAGCAGCTATTGGTA+TGG 0.528902 3.3:-60082126 MS.gene63320:intron
CAAGAACTGGTGTCTTGGCA+TGG 0.529236 3.3:-60082502 MS.gene63320:CDS
GAACCAACACCACAACCTGC+AGG 0.531310 3.3:+60083853 None:intergenic
TGAATCATCTGATTTGGGTG+CGG 0.533378 3.3:+60081254 None:intergenic
GTTTGTACCAATGGATATGA+AGG 0.534733 3.3:+60082682 None:intergenic
TAAAAGTCATCTTGAAGTGA+AGG 0.536272 3.3:+60082945 None:intergenic
TATGAATCTGTCACTACACT+TGG 0.538788 3.3:+60084017 None:intergenic
GAATCTGTCACTACACTTGG+AGG 0.541099 3.3:+60084020 None:intergenic
TCTGTTCAGTGGACCAAGGA+GGG 0.542314 3.3:-60082707 MS.gene63320:CDS
CTGCTGTGAAAGCCATTGCT+TGG 0.542537 3.3:-60082057 MS.gene63320:CDS
AATACTCTAGCAGTGGGACT+TGG 0.547037 3.3:-60082894 MS.gene63320:CDS
GAATATGTTGAGGTTTAAGA+CGG 0.551632 3.3:-60083809 MS.gene63320:CDS
ACAGAACAGACACCATCATA+AGG 0.552740 3.3:+60082725 None:intergenic
TTACTCACAAAATCAAATCA+TGG 0.552909 3.3:-60081783 MS.gene63320:CDS
CAACCTGCAGGAGAAGAAGA+AGG 0.554584 3.3:+60083865 None:intergenic
TTCTTACTCGGACTCACCAA+CGG 0.555252 3.3:+60083829 None:intergenic
GTGACTAAGCTGTGTGACTT+GGG 0.556960 3.3:-60082749 MS.gene63320:CDS
AGGTTTAAGACGGAGAGTTG+TGG 0.557810 3.3:-60083799 MS.gene63320:CDS
CACAAAATCAAATCATGGTG+TGG 0.560137 3.3:-60081778 MS.gene63320:CDS
TTATTGTTGACATCCCTGCT+GGG 0.562161 3.3:+60084136 None:intergenic
ACTTTCCTAGGAGGCTTAGG+AGG 0.563823 3.3:+60083706 None:intergenic
GAAATATCCATCACTAGCAA+AGG 0.565549 3.3:-60081756 MS.gene63320:intron
GTCTTGGGAACTTTCCTAGG+AGG 0.566632 3.3:+60083697 None:intergenic
ATGGTGTCTGTTCTGTTCAG+TGG 0.568692 3.3:-60082718 MS.gene63320:CDS
GTTTGGTAACAGATTTGGGA+TGG 0.569490 3.3:-60082566 MS.gene63320:intron
AACCTTCTCGTATCTGGAGG+TGG 0.572049 3.3:-60082019 MS.gene63320:CDS
ATGGAGAGGGTGTTGATGAG+AGG 0.580002 3.3:+60084049 None:intergenic
TTGTGGTGTTGGTTCGCCGT+TGG 0.584804 3.3:-60083845 MS.gene63320:CDS
ACCAGTCACCGGTTAAAGAA+GGG 0.584887 3.3:-60083948 MS.gene63320:CDS
ACGAGAAGGTTGCTCTGATG+AGG 0.586636 3.3:+60082031 None:intergenic
AAAGGCCTGTATCTTTAACT+GGG 0.587939 3.3:+60081287 None:intergenic
AGACAATAGTGACTGGTGCT+GGG 0.590497 3.3:-60081453 MS.gene63320:CDS
CAATTGAACTCTGTTGACAC+TGG 0.590791 3.3:-60081950 MS.gene63320:CDS
CTCGCAAAATACTCTAGCAG+TGG 0.592499 3.3:-60082901 MS.gene63320:CDS
TCATTTCTTCCAAATATCGA+AGG 0.592894 3.3:+60083754 None:intergenic
CTGGAGGTGGAACTGCTGAT+CGG 0.593470 3.3:-60082006 MS.gene63320:CDS
TTCTGTTCAGTGGACCAAGG+AGG 0.595713 3.3:-60082708 MS.gene63320:CDS
GACCATCAGGAGACATTGCA+AGG 0.595767 3.3:+60081587 None:intergenic
ACGAGGCGAAGCGGAAGAAG+GGG 0.599832 3.3:+60084083 None:intergenic
TACCTTGCAATGTCTCCTGA+TGG 0.601989 3.3:-60081589 MS.gene63320:CDS
TGCTCTGTAAGCCTCAAAGT+TGG 0.603299 3.3:+60082085 None:intergenic
GAAATGGTCCTGTGATGACC+GGG 0.607983 3.3:-60082264 MS.gene63320:CDS
TTGATAGCGTTTCAAGACGG+AGG 0.610384 3.3:+60084109 None:intergenic
CTGTTCTGTTCAGTGGACCA+AGG 0.611176 3.3:-60082711 MS.gene63320:CDS
CAATTGCAGACAATAGTGAC+TGG 0.618146 3.3:-60081460 MS.gene63320:intron
TGATAGCGTTTCAAGACGGA+GGG 0.619878 3.3:+60084110 None:intergenic
CTGATGAGGTGACCAAGCAA+TGG 0.623695 3.3:+60082045 None:intergenic
TAGCGTTTCAAGACGGAGGG+AGG 0.625960 3.3:+60084113 None:intergenic
AGCAACCTTCTCGTATCTGG+AGG 0.630408 3.3:-60082022 MS.gene63320:CDS
GGGTGCGGCCTAGTGACCAA+AGG 0.631232 3.3:+60081269 None:intergenic
TGTCAACAGAGTTCAATTGG+TGG 0.632166 3.3:+60081954 None:intergenic
CAGGTCTAAACCTCCCAGCA+GGG 0.636073 3.3:-60084149 MS.gene63320:CDS
ACATACTTCAGCATGACATG+AGG 0.639225 3.3:-60082442 MS.gene63320:CDS
TTGTTGACATCCCTGCTGGG+AGG 0.640070 3.3:+60084139 None:intergenic
TTCCACCTCCAGATACGAGA+AGG 0.640711 3.3:+60082017 None:intergenic
ATTAATCGATAACCAGTCAC+CGG 0.643856 3.3:-60083959 MS.gene63320:CDS
GTGTTGATAGCGTTTCAAGA+CGG 0.644951 3.3:+60084106 None:intergenic
TCGCAAAATACTCTAGCAGT+GGG 0.650045 3.3:-60082900 MS.gene63320:CDS
TGAGATCGCACGAGGCGAAG+CGG 0.650294 3.3:+60084074 None:intergenic
AAAAGGTCAGAACAATGGGA+GGG 0.656118 3.3:-60082532 MS.gene63320:CDS
GACAATAGTGACTGGTGCTG+GGG 0.659564 3.3:-60081452 MS.gene63320:CDS
CATACTTCAGCATGACATGA+GGG 0.660026 3.3:-60082441 MS.gene63320:CDS
CGAGGCGAAGCGGAAGAAGG+GGG 0.662895 3.3:+60084084 None:intergenic
GGTTAAAGAAGGGAGTAATG+AGG 0.665035 3.3:-60083938 MS.gene63320:CDS
GACCGGGAACTTGCTTCTGG+TGG 0.665213 3.3:-60082248 MS.gene63320:CDS
GTCCGAGTAAGAATATGTTG+AGG 0.666814 3.3:-60083819 MS.gene63320:CDS
AATGAGCTAGTGAGTACACA+TGG 0.668243 3.3:-60081806 MS.gene63320:CDS
GGTATAGTACTCTCATGCTG+TGG 0.672992 3.3:+60081608 None:intergenic
GCTTGTCGGCCACAAATCCG+AGG 0.677734 3.3:-60082396 MS.gene63320:intron
GAGAGGTTTGAGATCGCACG+AGG 0.678836 3.3:+60084066 None:intergenic
AGTCTTGAAGATGATCTGCA+AGG 0.682253 3.3:+60083994 None:intergenic
AAGGCCTGTATCTTTAACTG+GGG 0.685695 3.3:+60081288 None:intergenic
AGTTCCCAAGACACCCCACA+AGG 0.689900 3.3:-60083686 MS.gene63320:CDS
ATATCCATTGGTACAAACGG+TGG 0.716983 3.3:-60082677 MS.gene63320:CDS
GTGCTGGGGATGAGACTCTG+CGG 0.730545 3.3:-60081438 MS.gene63320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTGATGTAAAAATTAA+GGG + chr3.3:60083933-60083952 None:intergenic 10.0%
!! TAAAATTGATGTAAAAATTA+AGG + chr3.3:60083934-60083953 None:intergenic 10.0%
!! TAATTAAGAAAAATTTCATA+TGG + chr3.3:60083786-60083805 None:intergenic 10.0%
!! TTGTTTATGATATAATAATA+GGG + chr3.3:60083899-60083918 None:intergenic 10.0%
!! TTTGTTTATGATATAATAAT+AGG + chr3.3:60083900-60083919 None:intergenic 10.0%
!!! ATATGAAATTTTTCTTAATT+AGG - chr3.3:60083785-60083804 MS.gene63320:CDS 10.0%
!! AATATGCAATAATTGAAAAT+TGG + chr3.3:60084071-60084090 None:intergenic 15.0%
!! TCAAAATATTTACACAAAAA+CGG + chr3.3:60081797-60081816 None:intergenic 15.0%
!! TATGTAAGTTATGAAATTGA+TGG - chr3.3:60083109-60083128 MS.gene63320:CDS 20.0%
!! TCAAATACTTAAACTTACAA+AGG + chr3.3:60082360-60082379 None:intergenic 20.0%
!!! ACAATTAGGATTTTAAATAG+AGG + chr3.3:60082239-60082258 None:intergenic 20.0%
!!! ACTTGATAATCATTTCTAAT+TGG + chr3.3:60083743-60083762 None:intergenic 20.0%
!!! ATATTGATTCTTCAAAAAAG+AGG + chr3.3:60083528-60083547 None:intergenic 20.0%
!!! ATTTTACTGTATTTGAGAAT+TGG - chr3.3:60081832-60081851 MS.gene63320:CDS 20.0%
!!! TACTAATTTGTTGTGATTTT+AGG - chr3.3:60082046-60082065 MS.gene63320:CDS 20.0%
!!! TATTTAATGCATAATTTTGC+AGG - chr3.3:60083574-60083593 MS.gene63320:intron 20.0%
!!! TTTGTGTAAATATTTTGAAC+AGG - chr3.3:60081799-60081818 MS.gene63320:CDS 20.0%
!!! TTTTACTGTATTTGAGAATT+GGG - chr3.3:60081833-60081852 MS.gene63320:CDS 20.0%
! AAATTGAACATATATCTGTG+TGG - chr3.3:60082653-60082672 MS.gene63320:intron 25.0%
! ACAGTTACAATAATATATCG+TGG - chr3.3:60082128-60082147 MS.gene63320:intron 25.0%
! AGATAATATGTTACCTTGAT+TGG - chr3.3:60081858-60081877 MS.gene63320:intron 25.0%
! ATACTAAACAGATAGATAGA+AGG + chr3.3:60083247-60083266 None:intergenic 25.0%
! CAATCATCAAATCAAATACA+TGG + chr3.3:60082827-60082846 None:intergenic 25.0%
! CACAACAAATTAGTAAAACT+AGG + chr3.3:60082041-60082060 None:intergenic 25.0%
! GTAAGTTTAAGTATTTGAGA+GGG - chr3.3:60082362-60082381 MS.gene63320:intron 25.0%
! TCATAGTGTATAACAGTATA+AGG - chr3.3:60081988-60082007 MS.gene63320:CDS 25.0%
! TGTAAGTTTAAGTATTTGAG+AGG - chr3.3:60082361-60082380 MS.gene63320:intron 25.0%
! TGTACATGTAATGATATTGT+TGG + chr3.3:60082630-60082649 None:intergenic 25.0%
! TTACTCACAAAATCAAATCA+TGG - chr3.3:60083649-60083668 MS.gene63320:intron 25.0%
!! AATAACAATAAGAGCTTGTT+TGG - chr3.3:60082849-60082868 MS.gene63320:intron 25.0%
!! TAATGATATTGTTGGCATTT+TGG + chr3.3:60082622-60082641 None:intergenic 25.0%
!! TTAGGATTTTAAATAGAGGT+TGG + chr3.3:60082235-60082254 None:intergenic 25.0%
!! TTGTTGAAATCTGAACTTTT+TGG - chr3.3:60081528-60081547 MS.gene63320:intron 25.0%
!!! AAAGTGTATACTGATTTTGT+AGG - chr3.3:60081899-60081918 MS.gene63320:intron 25.0%
!!! ATACTGATTTTGTAGGATAT+AGG - chr3.3:60081906-60081925 MS.gene63320:intron 25.0%
AAAGATAAAAACTTGCCTTG+TGG + chr3.3:60081764-60081783 None:intergenic 30.0%
AACCTCAACATATTCTTACT+CGG + chr3.3:60081618-60081637 None:intergenic 30.0%
AAGATAAAAACTTGCCTTGT+GGG + chr3.3:60081763-60081782 None:intergenic 30.0%
AATAATACCTTTGCTAGTGA+TGG + chr3.3:60083686-60083705 None:intergenic 30.0%
AATATGTTACCTTGATTGGT+AGG - chr3.3:60081862-60081881 MS.gene63320:intron 30.0%
AATCAACTCATAACCAGATT+AGG + chr3.3:60082269-60082288 None:intergenic 30.0%
AATTGTAGAAACTCCTAATC+TGG - chr3.3:60082253-60082272 MS.gene63320:CDS 30.0%
CAAATCAAAGTAAGCTAACA+AGG + chr3.3:60082794-60082813 None:intergenic 30.0%
CGATATTTGGAAGAAATGAT+GGG - chr3.3:60081682-60081701 MS.gene63320:intron 30.0%
CTGAAGCAAAAAGAAAAGTT+AGG + chr3.3:60084123-60084142 None:intergenic 30.0%
GAATATGTTGAGGTTTAAGA+CGG - chr3.3:60081623-60081642 MS.gene63320:CDS 30.0%
GATTAGGAGTTTCTACAATT+AGG + chr3.3:60082253-60082272 None:intergenic 30.0%
TAAAAGTCATCTTGAAGTGA+AGG + chr3.3:60082490-60082509 None:intergenic 30.0%
TAATCAAATCCTACCAATCA+AGG + chr3.3:60081874-60081893 None:intergenic 30.0%
TAGGGAATTATGTTGTTAAG+TGG + chr3.3:60083881-60083900 None:intergenic 30.0%
TATGCTATGACTCTATCTTA+GGG + chr3.3:60081948-60081967 None:intergenic 30.0%
TCATTTCTTCCAAATATCGA+AGG + chr3.3:60081681-60081700 None:intergenic 30.0%
TCGATATTTGGAAGAAATGA+TGG - chr3.3:60081681-60081700 MS.gene63320:intron 30.0%
TTCATATCCATTGGTACAAA+CGG - chr3.3:60082752-60082771 MS.gene63320:CDS 30.0%
TTGATTGGTAGGATTTGATT+AGG - chr3.3:60081873-60081892 MS.gene63320:intron 30.0%
TTTACTTGAATCTTGTGGAT+TGG - chr3.3:60082506-60082525 MS.gene63320:CDS 30.0%
! CTAACTTTTCTTTTTGCTTC+AGG - chr3.3:60084121-60084140 MS.gene63320:CDS 30.0%
! CTTGTTAGCTTACTTTGATT+TGG - chr3.3:60082792-60082811 MS.gene63320:intron 30.0%
! GAGTTCTTTTAAGCAATACT+AGG + chr3.3:60084099-60084118 None:intergenic 30.0%
! GTCAAATGGTTTTTATACCT+CGG + chr3.3:60083056-60083075 None:intergenic 30.0%
! TGACTTTTACTTGAATCTTG+TGG - chr3.3:60082501-60082520 MS.gene63320:CDS 30.0%
! TGTTTTATATGAGCAGCTAT+TGG - chr3.3:60083301-60083320 MS.gene63320:intron 30.0%
! TTACAGGTGTTTTCATTGAT+GGG + chr3.3:60084034-60084053 None:intergenic 30.0%
! TTACATTTTTACTCCAAGCA+AGG + chr3.3:60083607-60083626 None:intergenic 30.0%
! TTTTTATCCTTCAACTTGAC+AGG - chr3.3:60083135-60083154 MS.gene63320:intron 30.0%
!!! AAATGATGGGTTTTGTAATG+AGG - chr3.3:60081695-60081714 MS.gene63320:intron 30.0%
!!! AAGACTAGGGTTTTAAATAG+AGG - chr3.3:60082097-60082116 MS.gene63320:CDS 30.0%
!!! AATGATGGGTTTTGTAATGA+GGG - chr3.3:60081696-60081715 MS.gene63320:intron 30.0%
AAAACTAGGATTGTCATGAG+TGG + chr3.3:60082027-60082046 None:intergenic 35.0%
AAAGGCCTGTATCTTTAACT+GGG + chr3.3:60084148-60084167 None:intergenic 35.0%
AAGAGGTAAGAAAGTAAACC+TGG + chr3.3:60083511-60083530 None:intergenic 35.0%
AATATCGAAGGCGAAGAAAA+AGG + chr3.3:60081669-60081688 None:intergenic 35.0%
AGATAAAAACTTGCCTTGTG+GGG + chr3.3:60081762-60081781 None:intergenic 35.0%
ATGACTCTATCTTAGGGTTT+AGG + chr3.3:60081942-60081961 None:intergenic 35.0%
ATGCAAAAAGGTCAGAACAA+TGG - chr3.3:60082895-60082914 MS.gene63320:CDS 35.0%
ATTAATCGATAACCAGTCAC+CGG - chr3.3:60081473-60081492 MS.gene63320:intron 35.0%
CACAAAATCAAATCATGGTG+TGG - chr3.3:60083654-60083673 MS.gene63320:intron 35.0%
CTATGCTATGACTCTATCTT+AGG + chr3.3:60081949-60081968 None:intergenic 35.0%
GAAATATCCATCACTAGCAA+AGG - chr3.3:60083676-60083695 MS.gene63320:intron 35.0%
GGAGTAATGAGGCTTATAAT+AGG - chr3.3:60081505-60081524 MS.gene63320:intron 35.0%
GGATGGTACTAAATGCAAAA+AGG - chr3.3:60082883-60082902 MS.gene63320:CDS 35.0%
GTTTGTACCAATGGATATGA+AGG + chr3.3:60082753-60082772 None:intergenic 35.0%
TATATGAGCAGCTATTGGTA+TGG - chr3.3:60083306-60083325 MS.gene63320:intron 35.0%
TATGAATCTGTCACTACACT+TGG + chr3.3:60081418-60081437 None:intergenic 35.0%
TCACCACAAGCAAAAAAATC+AGG - chr3.3:60081264-60081283 MS.gene63320:CDS 35.0%
TCATTACTCCCTTCTTTAAC+CGG + chr3.3:60081495-60081514 None:intergenic 35.0%
TCTTCAAGACTGCATACATT+CGG - chr3.3:60081450-60081469 MS.gene63320:CDS 35.0%
TGATAAGATGCTCTCTTGTT+TGG + chr3.3:60083551-60083570 None:intergenic 35.0%
TGCAAAAAGGTCAGAACAAT+GGG - chr3.3:60082896-60082915 MS.gene63320:CDS 35.0%
! AATTAGGTTGCAACTCTAAC+TGG - chr3.3:60083801-60083820 MS.gene63320:CDS 35.0%
! AGCTTGTTTGGTAACAGATT+TGG - chr3.3:60082861-60082880 MS.gene63320:CDS 35.0%
! CATATATCTGTGTGGTTTTC+AGG - chr3.3:60082661-60082680 MS.gene63320:intron 35.0%
! CTTACAGGTGTTTTCATTGA+TGG + chr3.3:60084035-60084054 None:intergenic 35.0%
! GCTTGTTTGGTAACAGATTT+GGG - chr3.3:60082862-60082881 MS.gene63320:CDS 35.0%
! GTTTTTATACCTCGGATTTG+TGG + chr3.3:60083048-60083067 None:intergenic 35.0%
! TTCTGGTGGTAATGATAATC+AGG - chr3.3:60083198-60083217 MS.gene63320:intron 35.0%
! TTTTCTTCGCCTTCGATATT+TGG - chr3.3:60081669-60081688 MS.gene63320:intron 35.0%
!!! AGACCTGATTTTTTTGCTTG+TGG + chr3.3:60081270-60081289 None:intergenic 35.0%
!!! AGGGTTTTAAATAGAGGTTG+CGG - chr3.3:60082103-60082122 MS.gene63320:CDS 35.0%
AAAAAGGTCAGAACAATGGG+AGG - chr3.3:60082899-60082918 MS.gene63320:CDS 40.0%
AAAAGGTCAGAACAATGGGA+GGG - chr3.3:60082900-60082919 MS.gene63320:CDS 40.0%
AAGGCCTGTATCTTTAACTG+GGG + chr3.3:60084147-60084166 None:intergenic 40.0%
AATGAGCTAGTGAGTACACA+TGG - chr3.3:60083626-60083645 MS.gene63320:intron 40.0%
AATTGAACAATGCTGTGTGC+AGG - chr3.3:60082453-60082472 MS.gene63320:CDS 40.0%
ACAGAACAGACACCATCATA+AGG + chr3.3:60082710-60082729 None:intergenic 40.0%
ACATACTTCAGCATGACATG+AGG - chr3.3:60082990-60083009 MS.gene63320:intron 40.0%
ACTCTCAACAACCAACTTTG+AGG - chr3.3:60083336-60083355 MS.gene63320:intron 40.0%
AGTCTTACATTGCAATGGCA+CGG + chr3.3:60082083-60082102 None:intergenic 40.0%
AGTCTTGAAGATGATCTGCA+AGG + chr3.3:60081441-60081460 None:intergenic 40.0%
ATATCCATTGGTACAAACGG+TGG - chr3.3:60082755-60082774 MS.gene63320:intron 40.0%
CAAAGGCCTGTATCTTTAAC+TGG + chr3.3:60084149-60084168 None:intergenic 40.0%
CAATTGAACTCTGTTGACAC+TGG - chr3.3:60083482-60083501 MS.gene63320:intron 40.0%
CAATTGCAGACAATAGTGAC+TGG - chr3.3:60083972-60083991 MS.gene63320:CDS 40.0%
CAGTGTCAACAGAGTTCAAT+TGG + chr3.3:60083484-60083503 None:intergenic 40.0%
CAGTTAAAGATACAGGCCTT+TGG - chr3.3:60084147-60084166 MS.gene63320:CDS 40.0%
CATACTTCAGCATGACATGA+GGG - chr3.3:60082991-60083010 MS.gene63320:intron 40.0%
CTCAATGCGTATCTGTCAAA+TGG + chr3.3:60083070-60083089 None:intergenic 40.0%
GAAGAAGGAGAAGCAAAATC+AGG + chr3.3:60081555-60081574 None:intergenic 40.0%
GACTTTATTGGCAAGCTTGT+CGG - chr3.3:60083022-60083041 MS.gene63320:intron 40.0%
GCCATTGCAATGTAAGACTA+GGG - chr3.3:60082084-60082103 MS.gene63320:CDS 40.0%
GGTTAAAGAAGGGAGTAATG+AGG - chr3.3:60081494-60081513 MS.gene63320:intron 40.0%
GTCCGAGTAAGAATATGTTG+AGG - chr3.3:60081613-60081632 MS.gene63320:CDS 40.0%
TCAAACAAGAACTGGTGTCT+TGG - chr3.3:60082925-60082944 MS.gene63320:CDS 40.0%
TCGCAAAATACTCTAGCAGT+GGG - chr3.3:60082532-60082551 MS.gene63320:CDS 40.0%
TGCCATTGCAATGTAAGACT+AGG - chr3.3:60082083-60082102 MS.gene63320:CDS 40.0%
TGTCAACAGAGTTCAATTGG+TGG + chr3.3:60083481-60083500 None:intergenic 40.0%
TTATTGTTGACATCCCTGCT+GGG + chr3.3:60081299-60081318 None:intergenic 40.0%
TTGGCACTTGTGTTTATCTC+TGG - chr3.3:60082557-60082576 MS.gene63320:CDS 40.0%
! CTACACTTGGAGGATTTTGA+TGG + chr3.3:60081405-60081424 None:intergenic 40.0%
! GACAGGTTTGTGGATTGAAA+TGG - chr3.3:60083152-60083171 MS.gene63320:intron 40.0%
! GTTTGGTAACAGATTTGGGA+TGG - chr3.3:60082866-60082885 MS.gene63320:CDS 40.0%
!! ACCCTAGTCTTACATTGCAA+TGG + chr3.3:60082088-60082107 None:intergenic 40.0%
!! GTGTTGATAGCGTTTCAAGA+CGG + chr3.3:60081329-60081348 None:intergenic 40.0%
!! TTGGAGGATTTTGATGGAGA+GGG + chr3.3:60081399-60081418 None:intergenic 40.0%
!!! AATTCTCGCATTTTGGCTTC+AGG - chr3.3:60082953-60082972 MS.gene63320:CDS 40.0%
AAGGAAGCAATTGTGTCTGC+TGG + chr3.3:60083228-60083247 None:intergenic 45.0%
AATACTCTAGCAGTGGGACT+TGG - chr3.3:60082538-60082557 MS.gene63320:CDS 45.0%
AGACAATAGTGACTGGTGCT+GGG - chr3.3:60083979-60083998 MS.gene63320:CDS 45.0%
AGCTTGCCAATAAAGTCGCT+TGG + chr3.3:60083019-60083038 None:intergenic 45.0%
AGGGTTCCAAGCGACTTTAT+TGG - chr3.3:60083010-60083029 MS.gene63320:intron 45.0%
ATGGTGTCTGTTCTGTTCAG+TGG - chr3.3:60082714-60082733 MS.gene63320:CDS 45.0%
CCTTCAACTTGACAGGTTTG+TGG - chr3.3:60083142-60083161 MS.gene63320:intron 45.0%
CTCGCAAAATACTCTAGCAG+TGG - chr3.3:60082531-60082550 MS.gene63320:CDS 45.0%
CTGATCGGTGTATTCGTTTC+TGG - chr3.3:60083441-60083460 MS.gene63320:intron 45.0%
GAATCTGTCACTACACTTGG+AGG + chr3.3:60081415-60081434 None:intergenic 45.0%
GAGGGTTCCTTCATATCCAT+TGG - chr3.3:60082743-60082762 MS.gene63320:CDS 45.0%
GGTATAGTACTCTCATGCTG+TGG + chr3.3:60083827-60083846 None:intergenic 45.0%
GTGACTAAGCTGTGTGACTT+GGG - chr3.3:60082683-60082702 MS.gene63320:CDS 45.0%
GTTATTGTTGACATCCCTGC+TGG + chr3.3:60081300-60081319 None:intergenic 45.0%
TACAAACGGTGGTCAAGTTC+AGG - chr3.3:60082766-60082785 MS.gene63320:intron 45.0%
TACCTTGCAATGTCTCCTGA+TGG - chr3.3:60083843-60083862 MS.gene63320:CDS 45.0%
TGAAATGGTCCTGTGATGAC+CGG - chr3.3:60083167-60083186 MS.gene63320:intron 45.0%
TGCTCTGTAAGCCTCAAAGT+TGG + chr3.3:60083350-60083369 None:intergenic 45.0%
TGGACATTTACCTGACCATC+AGG + chr3.3:60083861-60083880 None:intergenic 45.0%
TTCTTACTCGGACTCACCAA+CGG + chr3.3:60081606-60081625 None:intergenic 45.0%
TTGACCACCGTTTGTACCAA+TGG + chr3.3:60082762-60082781 None:intergenic 45.0%
! AACCAGTCACCGGTTAAAGA+AGG - chr3.3:60081483-60081502 MS.gene63320:intron 45.0%
! ACCAGTCACCGGTTAAAGAA+GGG - chr3.3:60081484-60081503 MS.gene63320:intron 45.0%
! AGGTTTAAGACGGAGAGTTG+TGG - chr3.3:60081633-60081652 MS.gene63320:intron 45.0%
! CACCTGTAAGCATTGCATTG+TGG - chr3.3:60084045-60084064 MS.gene63320:CDS 45.0%
! GGCATGGAATTCTCGCATTT+TGG - chr3.3:60082946-60082965 MS.gene63320:CDS 45.0%
! TGATAGCGTTTCAAGACGGA+GGG + chr3.3:60081325-60081344 None:intergenic 45.0%
! TGTGACTTGGGACCTTATGA+TGG - chr3.3:60082695-60082714 MS.gene63320:CDS 45.0%
!! CACTGCTAGAGTATTTTGCG+AGG + chr3.3:60082533-60082552 None:intergenic 45.0%
!! CCACAAACCTGTCAAGTTGA+AGG + chr3.3:60083145-60083164 None:intergenic 45.0%
!! CGTTTCTGGAACACGACAAA+TGG - chr3.3:60083455-60083474 MS.gene63320:intron 45.0%
!! CTTGGAGGATTTTGATGGAG+AGG + chr3.3:60081400-60081419 None:intergenic 45.0%
!! TTGATAGCGTTTCAAGACGG+AGG + chr3.3:60081326-60081345 None:intergenic 45.0%
!! TTGCAATGCCATCGATTCTC+AGG + chr3.3:60082183-60082202 None:intergenic 45.0%
!!! CATTTTGGCTTCAGGAAGCA+GGG - chr3.3:60082961-60082980 MS.gene63320:intron 45.0%
AACCTTCTCGTATCTGGAGG+TGG - chr3.3:60083413-60083432 MS.gene63320:intron 50.0%
ACAATGCTGTGTGCAGGTTC+TGG - chr3.3:60082459-60082478 MS.gene63320:CDS 50.0%
ACGAGAAGGTTGCTCTGATG+AGG + chr3.3:60083404-60083423 None:intergenic 50.0%
ACTTTCCTAGGAGGCTTAGG+AGG + chr3.3:60081729-60081748 None:intergenic 50.0%
AGCAACCTTCTCGTATCTGG+AGG - chr3.3:60083410-60083429 MS.gene63320:intron 50.0%
CAACCTGCAGGAGAAGAAGA+AGG + chr3.3:60081570-60081589 None:intergenic 50.0%
CAAGAACTGGTGTCTTGGCA+TGG - chr3.3:60082930-60082949 MS.gene63320:CDS 50.0%
CAGACAATAGTGACTGGTGC+TGG - chr3.3:60083978-60083997 MS.gene63320:CDS 50.0%
CAGAGCAACCTTCTCGTATC+TGG - chr3.3:60083407-60083426 MS.gene63320:intron 50.0%
CAGGCCCCAGTTAAAGATAC+AGG - chr3.3:60084140-60084159 MS.gene63320:CDS 50.0%
CTGATGAGGTGACCAAGCAA+TGG + chr3.3:60083390-60083409 None:intergenic 50.0%
CTGCTGTGAAAGCCATTGCT+TGG - chr3.3:60083375-60083394 MS.gene63320:intron 50.0%
CTGTTCTGTTCAGTGGACCA+AGG - chr3.3:60082721-60082740 MS.gene63320:CDS 50.0%
GAAATGGTCCTGTGATGACC+GGG - chr3.3:60083168-60083187 MS.gene63320:intron 50.0%
GACCATCAGGAGACATTGCA+AGG + chr3.3:60083848-60083867 None:intergenic 50.0%
GATACAGGCCTTTGGTCACT+AGG - chr3.3:60084155-60084174 MS.gene63320:CDS 50.0%
GGAACTTTCCTAGGAGGCTT+AGG + chr3.3:60081732-60081751 None:intergenic 50.0%
GGATATGAAGGAACCCTCCT+TGG + chr3.3:60082741-60082760 None:intergenic 50.0%
GGCCACAATGCAATGCTTAC+AGG + chr3.3:60084050-60084069 None:intergenic 50.0%
GGCGAAGAAAAAGGCGAAGA+AGG + chr3.3:60081660-60081679 None:intergenic 50.0%
GGTGACTAAGCTGTGTGACT+TGG - chr3.3:60082682-60082701 MS.gene63320:CDS 50.0%
GGTGTCTTGGGAACTTTCCT+AGG + chr3.3:60081741-60081760 None:intergenic 50.0%
GTCTTGGGAACTTTCCTAGG+AGG + chr3.3:60081738-60081757 None:intergenic 50.0%
TACCACCAGAAGCAAGTTCC+CGG + chr3.3:60083189-60083208 None:intergenic 50.0%
TCCCTTCTTTAACCGGTGAC+TGG + chr3.3:60081488-60081507 None:intergenic 50.0%
TCTCCTTCTTCTTCTCCTGC+AGG - chr3.3:60081564-60081583 MS.gene63320:intron 50.0%
TCTGTTCAGTGGACCAAGGA+GGG - chr3.3:60082725-60082744 MS.gene63320:CDS 50.0%
TCTTCTTCTCCTGCAGGTTG+TGG - chr3.3:60081570-60081589 MS.gene63320:intron 50.0%
TGCAATGTCTCCTGATGGTC+AGG - chr3.3:60083848-60083867 MS.gene63320:CDS 50.0%
TGCAGGTGTGTAACCTTGCT+TGG - chr3.3:60083591-60083610 MS.gene63320:intron 50.0%
TTCCACCTCCAGATACGAGA+AGG + chr3.3:60083418-60083437 None:intergenic 50.0%
TTCTGTTCAGTGGACCAAGG+AGG - chr3.3:60082724-60082743 MS.gene63320:CDS 50.0%
! GACAATAGTGACTGGTGCTG+GGG - chr3.3:60083980-60083999 MS.gene63320:CDS 50.0%
!! ATGGAGAGGGTGTTGATGAG+AGG + chr3.3:60081386-60081405 None:intergenic 50.0%
!! CATCGATTCTCAGGTCGCAT+CGG + chr3.3:60082174-60082193 None:intergenic 50.0%
!! GGAGGGCATCAAACAAGAAC+TGG - chr3.3:60082917-60082936 MS.gene63320:CDS 50.0%
!!! GCATTTTGGCTTCAGGAAGC+AGG - chr3.3:60082960-60082979 MS.gene63320:CDS 50.0%
AGCAAGTTCCCGGTCATCAC+AGG + chr3.3:60083179-60083198 None:intergenic 55.0%
AGTTCCCAAGACACCCCACA+AGG - chr3.3:60081746-60081765 MS.gene63320:intron 55.0%
CAGGTCTAAACCTCCCAGCA+GGG - chr3.3:60081283-60081302 MS.gene63320:CDS 55.0%
CGATGCGACCTGAGAATCGA+TGG - chr3.3:60082172-60082191 MS.gene63320:intron 55.0%
CTACTCCTCCTAAGCCTCCT+AGG - chr3.3:60081721-60081740 MS.gene63320:intron 55.0%
CTCTGTTGACACTGGAAGCC+AGG - chr3.3:60083490-60083509 MS.gene63320:intron 55.0%
CTGGAGGTGGAACTGCTGAT+CGG - chr3.3:60083426-60083445 MS.gene63320:intron 55.0%
GAACCAACACCACAACCTGC+AGG + chr3.3:60081582-60081601 None:intergenic 55.0%
TAGCGTTTCAAGACGGAGGG+AGG + chr3.3:60081322-60081341 None:intergenic 55.0%
TCAGGTCTAAACCTCCCAGC+AGG - chr3.3:60081282-60081301 MS.gene63320:CDS 55.0%
TCTCCTGCAGGTTGTGGTGT+TGG - chr3.3:60081576-60081595 MS.gene63320:intron 55.0%
TGGCTTCAGGAAGCAGGGAT+AGG - chr3.3:60082966-60082985 MS.gene63320:intron 55.0%
TTGTTGACATCCCTGCTGGG+AGG + chr3.3:60081296-60081315 None:intergenic 55.0%
! ACTTGCCTTGTGGGGTGTCT+TGG + chr3.3:60081754-60081773 None:intergenic 55.0%
! CTTGCCTTGTGGGGTGTCTT+GGG + chr3.3:60081753-60081772 None:intergenic 55.0%
! GAGAGGTTTGAGATCGCACG+AGG + chr3.3:60081369-60081388 None:intergenic 55.0%
! GATGACCGGGAACTTGCTTC+TGG - chr3.3:60083181-60083200 MS.gene63320:intron 55.0%
! GGGATGAGACTCTGCGGTTT+TGG - chr3.3:60084000-60084019 MS.gene63320:CDS 55.0%
!! TTGTGGTGTTGGTTCGCCGT+TGG - chr3.3:60081587-60081606 MS.gene63320:CDS 55.0%
ACGAGGCGAAGCGGAAGAAG+GGG + chr3.3:60081352-60081371 None:intergenic 60.0%
CACGAGGCGAAGCGGAAGAA+GGG + chr3.3:60081353-60081372 None:intergenic 60.0%
GCTTGTCGGCCACAAATCCG+AGG - chr3.3:60083036-60083055 MS.gene63320:intron 60.0%
GTGCTGGGGATGAGACTCTG+CGG - chr3.3:60083994-60084013 MS.gene63320:CDS 60.0%
TGAGATCGCACGAGGCGAAG+CGG + chr3.3:60081361-60081380 None:intergenic 60.0%
! GACCGGGAACTTGCTTCTGG+TGG - chr3.3:60083184-60083203 MS.gene63320:intron 60.0%
CGAGGCGAAGCGGAAGAAGG+GGG + chr3.3:60081351-60081370 None:intergenic 65.0%
GCACGAGGCGAAGCGGAAGA+AGG + chr3.3:60081354-60081373 None:intergenic 65.0%
GGGTGCGGCCTAGTGACCAA+AGG + chr3.3:60084166-60084185 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 60081258 60084196 60081258 ID=MS.gene63320
chr3.3 mRNA 60081258 60084196 60081258 ID=MS.gene63320.t1;Parent=MS.gene63320
chr3.3 exon 60083683 60084196 60083683 ID=MS.gene63320.t1.exon1;Parent=MS.gene63320.t1
chr3.3 CDS 60083683 60084196 60083683 ID=cds.MS.gene63320.t1;Parent=MS.gene63320.t1
chr3.3 exon 60083527 60083533 60083527 ID=MS.gene63320.t1.exon2;Parent=MS.gene63320.t1
chr3.3 CDS 60083527 60083533 60083527 ID=cds.MS.gene63320.t1;Parent=MS.gene63320.t1
chr3.3 exon 60083093 60083141 60083093 ID=MS.gene63320.t1.exon3;Parent=MS.gene63320.t1
chr3.3 CDS 60083093 60083141 60083093 ID=cds.MS.gene63320.t1;Parent=MS.gene63320.t1
chr3.3 exon 60082857 60082979 60082857 ID=MS.gene63320.t1.exon4;Parent=MS.gene63320.t1
chr3.3 CDS 60082857 60082979 60082857 ID=cds.MS.gene63320.t1;Parent=MS.gene63320.t1
chr3.3 exon 60082667 60082771 60082667 ID=MS.gene63320.t1.exon5;Parent=MS.gene63320.t1
chr3.3 CDS 60082667 60082771 60082667 ID=cds.MS.gene63320.t1;Parent=MS.gene63320.t1
chr3.3 exon 60082397 60082576 60082397 ID=MS.gene63320.t1.exon6;Parent=MS.gene63320.t1
chr3.3 CDS 60082397 60082576 60082397 ID=cds.MS.gene63320.t1;Parent=MS.gene63320.t1
chr3.3 exon 60082235 60082297 60082235 ID=MS.gene63320.t1.exon7;Parent=MS.gene63320.t1
chr3.3 CDS 60082235 60082297 60082235 ID=cds.MS.gene63320.t1;Parent=MS.gene63320.t1
chr3.3 exon 60081943 60082137 60081943 ID=MS.gene63320.t1.exon8;Parent=MS.gene63320.t1
chr3.3 CDS 60081943 60082137 60081943 ID=cds.MS.gene63320.t1;Parent=MS.gene63320.t1
chr3.3 exon 60081757 60081858 60081757 ID=MS.gene63320.t1.exon9;Parent=MS.gene63320.t1
chr3.3 CDS 60081757 60081858 60081757 ID=cds.MS.gene63320.t1;Parent=MS.gene63320.t1
chr3.3 exon 60081585 60081647 60081585 ID=MS.gene63320.t1.exon10;Parent=MS.gene63320.t1
chr3.3 CDS 60081585 60081647 60081585 ID=cds.MS.gene63320.t1;Parent=MS.gene63320.t1
chr3.3 exon 60081405 60081473 60081405 ID=MS.gene63320.t1.exon11;Parent=MS.gene63320.t1
chr3.3 CDS 60081405 60081473 60081405 ID=cds.MS.gene63320.t1;Parent=MS.gene63320.t1
chr3.3 exon 60081258 60081311 60081258 ID=MS.gene63320.t1.exon12;Parent=MS.gene63320.t1
chr3.3 CDS 60081258 60081311 60081258 ID=cds.MS.gene63320.t1;Parent=MS.gene63320.t1
Gene Sequence

>MS.gene63320

ATGGAGTCACCACAAGCAAAAAAATCAGGTCTAAACCTCCCAGCAGGGATGTCAACAATAACCTCCCTCCGTCTTGAAACGCTATCAACACCCCCTTCTTCCGCTTCGCCTCGTGCGATCTCAAACCTCTCATCAACACCCTCTCCATCAAAATCCTCCAAGTGTAGTGACAGATTCATACCTTGCAGATCATCTTCAAGACTGCATACATTCGGATTAATCGATAACCAGTCACCGGTTAAAGAAGGGAGTAATGAGGCTTATAATAGGTTGTTGAAATCTGAACTTTTTGGACCTGATTTTGCTTCTCCTTCTTCTTCTCCTGCAGGTTGTGGTGTTGGTTCGCCGTTGGTGAGTCCGAGTAAGAATATGTTGAGGTTTAAGACGGAGAGTTGTGGACCTTCTTCGCCTTTTTCTTCGCCTTCGATATTTGGAAGAAATGATGGGTTTTGTAATGAGGGTTCTACTCCTCCTAAGCCTCCTAGGAAAGTTCCCAAGACACCCCACAAGGCAAGTTTTTATCTTTTTCTCTTTTACCGTTTTTGTGTAAATATTTTGAACAGGAAATTGTTTAATTTTACTGTATTTGAGAATTGGGTTAGATAATATGTTACCTTGATTGGTAGGATTTGATTAGGTCTAAAGTGTATACTGATTTTGTAGGATATAGGTACATTTACACCTAAACCCTAAGATAGAGTCATAGCATAGCTCTTAATGAGTGAGATAGTCATAGTGTATAACAGTATAAGGAAATGCTCAATTTCCACTCATGACAATCCTAGTTTTACTAATTTGTTGTGATTTTAGGTTAGAATAGAGCCGTGCCATTGCAATGTAAGACTAGGGTTTTAAATAGAGGTTGCGGTAACAGTTACAATAATATATCGTGGAAAATTGCAGTCGAATGCAGCCGATGCGACCTGAGAATCGATGGCATTGCAATTTTGAAAACATTAGAAACTGTTATTTTGCCAACCTCTATTTAAAATCCTAATTGTAGAAACTCCTAATCTGGTTATGAGTTGATTAAAGTTGAGTTTTTTCAACTCTAGATGTAAAAGAGTTTGTGTATTGTTCACATTTCAAGCTCTCAAAACCTTTGTAAGTTTAAGTATTTGAGAGGGTTTGTCTTTGATACAGTAGACAAAAAATTCTTAGAGCTAATAATGATTGTTGAATGTTGATTTTCTAAAATTGAACAATGCTGTGTGCAGGTTCTGGATGCTCCTTCACTTCAAGATGACTTTTACTTGAATCTTGTGGATTGGTCCTCGCAAAATACTCTAGCAGTGGGACTTGGCACTTGTGTTTATCTCTGGAGTGCTTCAAACAGCAAAGTGAGTATCATTACGAACTTGCCAAAATGCCAACAATATCATTACATGTACAATCAAATTGAACATATATCTGTGTGGTTTTCAGGTGACTAAGCTGTGTGACTTGGGACCTTATGATGGTGTCTGTTCTGTTCAGTGGACCAAGGAGGGTTCCTTCATATCCATTGGTACAAACGGTGGTCAAGTTCAGGTACCTTGTTAGCTTACTTTGATTTGGTTTTATCATCCATGTATTTGATTTGATGATTGAGAATAACAATAAGAGCTTGTTTGGTAACAGATTTGGGATGGTACTAAATGCAAAAAGGTCAGAACAATGGGAGGGCATCAAACAAGAACTGGTGTCTTGGCATGGAATTCTCGCATTTTGGCTTCAGGAAGCAGGGATAGGAACATACTTCAGCATGACATGAGGGTTCCAAGCGACTTTATTGGCAAGCTTGTCGGCCACAAATCCGAGGTATAAAAACCATTTGACAGATACGCATTGAGCTAGTCATAAGATCAATTGTATGTAAGTTATGAAATTGATGGTAATTTTTATCCTTCAACTTGACAGGTTTGTGGATTGAAATGGTCCTGTGATGACCGGGAACTTGCTTCTGGTGGTAATGATAATCAGGTATGCCAGCAGACACAATTGCTTCCTTCTATCTATCTGTTTAGTATTTTTCGTGAGATTTAATTCATCAATTCAATGTCATGTTTTATATGAGCAGCTATTGGTATGGAATCAGCACTCTCAACAACCAACTTTGAGGCTTACAGAGCACACTGCTGCTGTGAAAGCCATTGCTTGGTCACCTCATCAGAGCAACCTTCTCGTATCTGGAGGTGGAACTGCTGATCGGTGTATTCGTTTCTGGAACACGACAAATGGCCACCAATTGAACTCTGTTGACACTGGAAGCCAGGTTTACTTTCTTACCTCTTTTTTGAAGAATCAATATCCAAACAAGAGAGCATCTTATCAAACTATTTAATGCATAATTTTGCAGGTGTGTAACCTTGCTTGGAGTAAAAATGTAAATGAGCTAGTGAGTACACATGGTTACTCACAAAATCAAATCATGGTGTGGAAATATCCATCACTAGCAAAGGTATTATTTTACATTGAGAATTCTAGATATTTTAGACATATTCCAATTAGAAATGATTATCAAGTATAAAATTAAAATGTCTTAACCATATGAAATTTTTCTTAATTAGGTTGCAACTCTAACTGGCCACAGCATGAGAGTACTATACCTTGCAATGTCTCCTGATGGTCAGGTAAATGTCCACTTAACAACATAATTCCCTATTATTATATCATAAACAAAAACAAATTGTCCCTTAATTTTTACATCAATTTTAATGTAATGCTGAATAATACAATTGCAGACAATAGTGACTGGTGCTGGGGATGAGACTCTGCGGTTTTGGAATGTTTTCCCATCAATGAAAACACCTGTAAGCATTGCATTGTGGCCAATTTTCAATTATTGCATATTATGTTCCTAGTATTGCTTAAAAGAACTCTCCTAACTTTTCTTTTTGCTTCAGGCCCCAGTTAAAGATACAGGCCTTTGGTCACTAGGCCGCACCCAAATCAGATGA

Protein sequence

>MS.gene63320.t1

MESPQAKKSGLNLPAGMSTITSLRLETLSTPPSSASPRAISNLSSTPSPSKSSKCSDRFIPCRSSSRLHTFGLIDNQSPVKEGSNEAYNRLLKSELFGPDFASPSSSPAGCGVGSPLVSPSKNMLRFKTESCGPSSPFSSPSIFGRNDGFCNEGSTPPKPPRKVPKTPHKARYRCKRVCVLFTFQALKTFVLDAPSLQDDFYLNLVDWSSQNTLAVGLGTCVYLWSASNSKVTKLCDLGPYDGVCSVQWTKEGSFISIGTNGGQVQIWDGTKCKKVRTMGGHQTRTGVLAWNSRILASGSRDRNILQHDMRVPSDFIGKLVGHKSEVCGLKWSCDDRELASGGNDNQLLVWNQHSQQPTLRLTEHTAAVKAIAWSPHQSNLLVSGGGTADRCIRFWNTTNGHQLNSVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLAKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTPAPVKDTGLWSLGRTQIR