Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71830.t1 | XP_013470174.1 | 77.3 | 163 | 2 | 2 | 1 | 131 | 1 | 160 | 3.00E-62 | 247.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71830.t1 | A0A072VQY7 | 77.3 | 163 | 2 | 2 | 1 | 131 | 1 | 160 | 2.2e-62 | 247.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene71830 | -0.815054 | 1.13E-51 | -1.69E-46 |
| MS.gene049341 | MS.gene71830 | -0.837702 | 4.45E-57 | -1.69E-46 |
| MS.gene049821 | MS.gene71830 | -0.805602 | 1.23E-49 | -1.69E-46 |
| MS.gene049887 | MS.gene71830 | -0.837034 | 6.60E-57 | -1.69E-46 |
| MS.gene050020 | MS.gene71830 | -0.821739 | 3.44E-53 | -1.69E-46 |
| MS.gene050194 | MS.gene71830 | -0.809566 | 1.78E-50 | -1.69E-46 |
| MS.gene050277 | MS.gene71830 | -0.803468 | 3.44E-49 | -1.69E-46 |
| MS.gene050586 | MS.gene71830 | -0.818065 | 2.38E-52 | -1.69E-46 |
| MS.gene050807 | MS.gene71830 | -0.850044 | 2.19E-60 | -1.69E-46 |
| MS.gene050808 | MS.gene71830 | -0.819188 | 1.32E-52 | -1.69E-46 |
| MS.gene050815 | MS.gene71830 | -0.809515 | 1.82E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene71830 | -0.82425 | 8.93E-54 | -1.69E-46 |
| MS.gene051328 | MS.gene71830 | -0.818583 | 1.82E-52 | -1.69E-46 |
| MS.gene051577 | MS.gene71830 | -0.820689 | 6.01E-53 | -1.69E-46 |
| MS.gene05157 | MS.gene71830 | -0.811064 | 8.44E-51 | -1.69E-46 |
| MS.gene051687 | MS.gene71830 | -0.810265 | 1.26E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene71830 | -0.809083 | 2.25E-50 | -1.69E-46 |
| MS.gene051850 | MS.gene71830 | -0.80874 | 2.67E-50 | -1.69E-46 |
| MS.gene052133 | MS.gene71830 | -0.860243 | 2.37E-63 | -1.69E-46 |
| MS.gene052397 | MS.gene71830 | -0.802169 | 6.37E-49 | -1.69E-46 |
| MS.gene052561 | MS.gene71830 | -0.81358 | 2.38E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene71830 | -0.85469 | 1.04E-61 | -1.69E-46 |
| MS.gene052732 | MS.gene71830 | -0.834817 | 2.41E-56 | -1.69E-46 |
| MS.gene052879 | MS.gene71830 | -0.801829 | 7.49E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene71830 | -0.821529 | 3.85E-53 | -1.69E-46 |
| MS.gene053132 | MS.gene71830 | -0.815098 | 1.10E-51 | -1.69E-46 |
| MS.gene053144 | MS.gene71830 | -0.82953 | 4.89E-55 | -1.69E-46 |
| MS.gene053174 | MS.gene71830 | -0.824757 | 6.79E-54 | -1.69E-46 |
| MS.gene053581 | MS.gene71830 | -0.831432 | 1.67E-55 | -1.69E-46 |
| MS.gene054550 | MS.gene71830 | -0.80378 | 2.96E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene71830 | -0.83567 | 1.47E-56 | -1.69E-46 |
| MS.gene055465 | MS.gene71830 | -0.840765 | 7.14E-58 | -1.69E-46 |
| MS.gene055466 | MS.gene71830 | -0.853638 | 2.09E-61 | -1.69E-46 |
| MS.gene055468 | MS.gene71830 | -0.858582 | 7.46E-63 | -1.69E-46 |
| MS.gene055469 | MS.gene71830 | -0.826994 | 2.00E-54 | -1.69E-46 |
| MS.gene055580 | MS.gene71830 | 0.890251 | 1.17E-73 | -1.69E-46 |
| MS.gene055808 | MS.gene71830 | -0.818613 | 1.79E-52 | -1.69E-46 |
| MS.gene055891 | MS.gene71830 | -0.816196 | 6.26E-52 | -1.69E-46 |
| MS.gene056043 | MS.gene71830 | 0.886257 | 4.00E-72 | -1.69E-46 |
| MS.gene056584 | MS.gene71830 | -0.80911 | 2.22E-50 | -1.69E-46 |
| MS.gene056830 | MS.gene71830 | 0.80625 | 9.01E-50 | -1.69E-46 |
| MS.gene057705 | MS.gene71830 | -0.836816 | 7.50E-57 | -1.69E-46 |
| MS.gene057869 | MS.gene71830 | -0.80095 | 1.13E-48 | -1.69E-46 |
| MS.gene058906 | MS.gene71830 | -0.825778 | 3.89E-54 | -1.69E-46 |
| MS.gene05954 | MS.gene71830 | -0.808468 | 3.05E-50 | -1.69E-46 |
| MS.gene059937 | MS.gene71830 | -0.820116 | 8.13E-53 | -1.69E-46 |
| MS.gene06001 | MS.gene71830 | -0.832132 | 1.13E-55 | -1.69E-46 |
| MS.gene060194 | MS.gene71830 | -0.813246 | 2.82E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene71830 | -0.837857 | 4.06E-57 | -1.69E-46 |
| MS.gene060587 | MS.gene71830 | -0.844604 | 6.82E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71830.t1 | MTR_1g110760 | 75.460 | 163 | 5 | 3 | 1 | 131 | 1 | 160 | 1.33e-62 | 189 |
| MS.gene71830.t1 | MTR_6g018430 | 39.623 | 159 | 52 | 4 | 2 | 131 | 25 | 168 | 1.61e-26 | 97.4 |
| MS.gene71830.t1 | MTR_8g104210 | 40.854 | 164 | 42 | 7 | 7 | 131 | 16 | 163 | 8.40e-23 | 87.8 |
| MS.gene71830.t1 | MTR_8g104210 | 40.854 | 164 | 42 | 7 | 7 | 131 | 25 | 172 | 1.31e-22 | 87.8 |
| MS.gene71830.t1 | MTR_6g084470 | 38.608 | 158 | 55 | 5 | 5 | 131 | 21 | 167 | 1.26e-19 | 79.7 |
| MS.gene71830.t1 | MTR_1g051170 | 47.674 | 86 | 38 | 2 | 39 | 117 | 63 | 148 | 1.57e-11 | 58.5 |
| MS.gene71830.t1 | MTR_4g087400 | 50.000 | 80 | 36 | 2 | 39 | 117 | 59 | 135 | 2.84e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71830.t1 | AT1G68490 | 52.469 | 162 | 36 | 5 | 4 | 131 | 29 | 183 | 3.85e-37 | 125 |
| MS.gene71830.t1 | AT5G16110 | 47.500 | 160 | 48 | 5 | 4 | 131 | 89 | 244 | 1.68e-29 | 107 |
| MS.gene71830.t1 | AT1G13390 | 43.478 | 161 | 49 | 5 | 4 | 131 | 25 | 176 | 3.62e-28 | 102 |
| MS.gene71830.t1 | AT1G13390 | 43.478 | 161 | 49 | 5 | 4 | 131 | 25 | 176 | 3.62e-28 | 102 |
| MS.gene71830.t1 | AT3G02555 | 45.695 | 151 | 41 | 4 | 5 | 131 | 29 | 162 | 2.14e-24 | 92.0 |
| MS.gene71830.t1 | AT3G02555 | 45.695 | 151 | 41 | 4 | 5 | 131 | 29 | 162 | 2.14e-24 | 92.0 |
Find 58 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCCGGATTGTTACCAAAAT+TGG | 0.118190 | 1.3:-75507860 | None:intergenic |
| GGATGTGTTCGGGCCAATTT+TGG | 0.234336 | 1.3:+75507847 | MS.gene71830:CDS |
| AGTCCGACACGGCGGGGCTT+AGG | 0.339729 | 1.3:-75507132 | None:intergenic |
| AGTAGCTAACCCACTAATTC+AGG | 0.341828 | 1.3:+75507714 | MS.gene71830:CDS |
| TAATTCAGGATGCTCGATTC+GGG | 0.363565 | 1.3:+75507728 | MS.gene71830:CDS |
| CCTCCCTTCCTTGCAGAAGA+TGG | 0.393816 | 1.3:-75507826 | None:intergenic |
| CTAATTCAGGATGCTCGATT+CGG | 0.401608 | 1.3:+75507727 | MS.gene71830:CDS |
| AGAAGGTGGCAGACCGGATG+GGG | 0.404001 | 1.3:-75507800 | None:intergenic |
| GAGCAGGGATGCTGCAATTA+CGG | 0.410027 | 1.3:-75507921 | None:intergenic |
| CGCCCCTCTCACCGTCGTCA+TGG | 0.419708 | 1.3:+75507764 | MS.gene71830:CDS |
| GTCCGACACGGCGGGGCTTA+GGG | 0.420772 | 1.3:-75507131 | None:intergenic |
| CAAGGAAGGGAGGATGTGTT+CGG | 0.421741 | 1.3:+75507836 | MS.gene71830:CDS |
| GATCCTTCCGGTGGCATCTC+AGG | 0.425952 | 1.3:+75507187 | MS.gene71830:CDS |
| CTCCCTTCCTTGCAGAAGAT+GGG | 0.432493 | 1.3:-75507825 | None:intergenic |
| AAGGATTCGATTGCCTTGAC+AGG | 0.436802 | 1.3:+75507893 | MS.gene71830:CDS |
| TAATTGCAGCATCCCTGCTC+TGG | 0.448656 | 1.3:+75507924 | MS.gene71830:CDS |
| GCCCCTCTCACCGTCGTCAT+GGG | 0.457309 | 1.3:+75507765 | MS.gene71830:CDS |
| GGAGAAGGTGGCAGACCGGA+TGG | 0.458776 | 1.3:-75507802 | None:intergenic |
| GGTGGCAGACCGGATGGGGC+AGG | 0.466438 | 1.3:-75507796 | None:intergenic |
| TGCCCTAAGCCCCGCCGTGT+CGG | 0.473384 | 1.3:+75507129 | MS.gene71830:CDS |
| CTGTTGTTCTAAGCCAGAGC+AGG | 0.481278 | 1.3:-75507937 | None:intergenic |
| GAGAAGGTGGCAGACCGGAT+GGG | 0.484866 | 1.3:-75507801 | None:intergenic |
| ACTACCCGAGCAGATCCTTC+CGG | 0.494170 | 1.3:+75507175 | MS.gene71830:CDS |
| GTGGTGGTTCCTGCCCCATC+CGG | 0.495940 | 1.3:+75507787 | MS.gene71830:CDS |
| GTTGAGGAGTCCGACACGGC+GGG | 0.496709 | 1.3:-75507139 | None:intergenic |
| CTCACCGTCGTCATGGGTGG+TGG | 0.513742 | 1.3:+75507771 | MS.gene71830:CDS |
| TCTGCTCGGGTAGTCGTTGA+CGG | 0.526759 | 1.3:-75507166 | None:intergenic |
| CCACCCATGACGACGGTGAG+AGG | 0.533000 | 1.3:-75507768 | None:intergenic |
| AATCCGGCGGTGAGAGTCGA+AGG | 0.545936 | 1.3:+75507874 | MS.gene71830:CDS |
| TCCCTTCCTTGCAGAAGATG+GGG | 0.546203 | 1.3:-75507824 | None:intergenic |
| AATCGAGCATCCTGAATTAG+TGG | 0.550154 | 1.3:-75507724 | None:intergenic |
| AGTCGTTGACGGCGAAGTTG+AGG | 0.554697 | 1.3:-75507155 | None:intergenic |
| CACCCATGACGACGGTGAGA+GGG | 0.562391 | 1.3:-75507767 | None:intergenic |
| AAGGAAGGGAGGATGTGTTC+GGG | 0.568345 | 1.3:+75507837 | MS.gene71830:CDS |
| GCCACCGGAAGGATCTGCTC+GGG | 0.575084 | 1.3:-75507179 | None:intergenic |
| CCTCTCACCGTCGTCATGGG+TGG | 0.588491 | 1.3:+75507768 | MS.gene71830:CDS |
| AGTGGGTTAGCTACTCTGCT+CGG | 0.596257 | 1.3:-75507706 | None:intergenic |
| TGCCACCGGAAGGATCTGCT+CGG | 0.596625 | 1.3:-75507180 | None:intergenic |
| AGGATTCGATTGCCTTGACA+GGG | 0.597575 | 1.3:+75507894 | MS.gene71830:CDS |
| CCATCTTCTGCAAGGAAGGG+AGG | 0.605126 | 1.3:+75507826 | MS.gene71830:CDS |
| CCCTTCCTTGCAGAAGATGG+GGG | 0.610451 | 1.3:-75507823 | None:intergenic |
| ACCCATGACGACGGTGAGAG+GGG | 0.613698 | 1.3:-75507766 | None:intergenic |
| AATCCTTCGACTCTCACCGC+CGG | 0.616188 | 1.3:-75507877 | None:intergenic |
| TTTCGACGAAGGAAGATGAA+CGG | 0.620932 | 1.3:+75507090 | None:intergenic |
| AATTACGGCTGTCCCTGTCA+AGG | 0.629306 | 1.3:-75507906 | None:intergenic |
| ATCGAGCATCCTGAATTAGT+GGG | 0.630666 | 1.3:-75507723 | None:intergenic |
| GGCGGCGACGAGGCTACTGG+AGG | 0.632101 | 1.3:-75507661 | None:intergenic |
| AAATTCACCTGAGATGCCAC+CGG | 0.634810 | 1.3:-75507194 | None:intergenic |
| TCACCTGAGATGCCACCGGA+AGG | 0.642394 | 1.3:-75507190 | None:intergenic |
| CGAAGTTGAGGAGTCCGACA+CGG | 0.647237 | 1.3:-75507143 | None:intergenic |
| GGAACCACCACCCATGACGA+CGG | 0.659927 | 1.3:-75507775 | None:intergenic |
| TGTTGTTCTAAGCCAGAGCA+GGG | 0.670625 | 1.3:-75507936 | None:intergenic |
| ACCCGAGCAGATCCTTCCGG+TGG | 0.672658 | 1.3:+75507178 | MS.gene71830:CDS |
| AATTCAGGATGCTCGATTCG+GGG | 0.678593 | 1.3:+75507729 | MS.gene71830:CDS |
| AGTTGAGGAGTCCGACACGG+CGG | 0.682882 | 1.3:-75507140 | None:intergenic |
| TTGAGGAGTCCGACACGGCG+GGG | 0.686362 | 1.3:-75507138 | None:intergenic |
| GCGGGGCTTAGGGCAAACGA+CGG | 0.692402 | 1.3:-75507121 | None:intergenic |
| GGGTTAGCTACTCTGCTCGG+CGG | 0.725325 | 1.3:-75507703 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTCATATAAAATAATAG+AGG | - | chr1.3:75507389-75507408 | None:intergenic | 10.0% |
| !!! | CTATTATTTTATATGAATTT+AGG | + | chr1.3:75507389-75507408 | MS.gene71830:intron | 10.0% |
| !!! | AATTGATCTATTTTTAACAT+TGG | + | chr1.3:75507467-75507486 | MS.gene71830:intron | 15.0% |
| !!! | ATATGAATTTAGGTTAAAAT+TGG | + | chr1.3:75507399-75507418 | MS.gene71830:intron | 15.0% |
| !!! | TTTTCTCTTTTAATTTGCTT+TGG | + | chr1.3:75507239-75507258 | MS.gene71830:intron | 20.0% |
| ! | AATAGAGGAATTATTTACCT+TGG | - | chr1.3:75507374-75507393 | None:intergenic | 25.0% |
| ACACAAAGCAATTCAACAAA+AGG | - | chr1.3:75507563-75507582 | None:intergenic | 30.0% | |
| AATCGAGCATCCTGAATTAG+TGG | - | chr1.3:75507727-75507746 | None:intergenic | 40.0% | |
| AGTAGCTAACCCACTAATTC+AGG | + | chr1.3:75507714-75507733 | MS.gene71830:CDS | 40.0% | |
| ATCGAGCATCCTGAATTAGT+GGG | - | chr1.3:75507726-75507745 | None:intergenic | 40.0% | |
| CTAATTCAGGATGCTCGATT+CGG | + | chr1.3:75507727-75507746 | MS.gene71830:CDS | 40.0% | |
| GCAGATGAGTTTGAATCACA+CGG | - | chr1.3:75507325-75507344 | None:intergenic | 40.0% | |
| GCAGGATGATGATTGTGATA+CGG | + | chr1.3:75507627-75507646 | MS.gene71830:intron | 40.0% | |
| TAATTCAGGATGCTCGATTC+GGG | + | chr1.3:75507728-75507747 | MS.gene71830:CDS | 40.0% | |
| TTGAATCACACGGTTCAACT+TGG | - | chr1.3:75507315-75507334 | None:intergenic | 40.0% | |
| TTGGTGAGAATTGTGTCCAA+GGG | - | chr1.3:75507355-75507374 | None:intergenic | 40.0% | |
| !! | CAATTTTGGTAACAATCCGG+CGG | + | chr1.3:75507861-75507880 | MS.gene71830:CDS | 40.0% |
| !! | GGCCAATTTTGGTAACAATC+CGG | + | chr1.3:75507858-75507877 | MS.gene71830:CDS | 40.0% |
| !! | GTTGTGCTTTTGTGATTTGC+AGG | + | chr1.3:75507609-75507628 | MS.gene71830:intron | 40.0% |
| AAATTCACCTGAGATGCCAC+CGG | - | chr1.3:75507197-75507216 | None:intergenic | 45.0% | |
| AAGGATTCGATTGCCTTGAC+AGG | + | chr1.3:75507893-75507912 | MS.gene71830:CDS | 45.0% | |
| AGGATTCGATTGCCTTGACA+GGG | + | chr1.3:75507894-75507913 | MS.gene71830:CDS | 45.0% | |
| CGCCGGATTGTTACCAAAAT+TGG | - | chr1.3:75507863-75507882 | None:intergenic | 45.0% | |
| CTTGGACACAATTCTCACCA+AGG | + | chr1.3:75507354-75507373 | MS.gene71830:intron | 45.0% | |
| CTTGGTGAGAATTGTGTCCA+AGG | - | chr1.3:75507356-75507375 | None:intergenic | 45.0% | |
| ! | AATTCAGGATGCTCGATTCG+GGG | + | chr1.3:75507729-75507748 | MS.gene71830:CDS | 45.0% |
| AAGGAAGGGAGGATGTGTTC+GGG | + | chr1.3:75507837-75507856 | MS.gene71830:CDS | 50.0% | |
| AATTACGGCTGTCCCTGTCA+AGG | - | chr1.3:75507909-75507928 | None:intergenic | 50.0% | |
| CAAGGAAGGGAGGATGTGTT+CGG | + | chr1.3:75507836-75507855 | MS.gene71830:CDS | 50.0% | |
| CGGAGACCCACAGAAAAATG+GGG | - | chr1.3:75507686-75507705 | None:intergenic | 50.0% | |
| CTCATCTGCGTCAAATCCCT+TGG | + | chr1.3:75507336-75507355 | MS.gene71830:intron | 50.0% | |
| CTCCCTTCCTTGCAGAAGAT+GGG | - | chr1.3:75507828-75507847 | None:intergenic | 50.0% | |
| GAGCAGGGATGCTGCAATTA+CGG | - | chr1.3:75507924-75507943 | None:intergenic | 50.0% | |
| GCGGAGACCCACAGAAAAAT+GGG | - | chr1.3:75507687-75507706 | None:intergenic | 50.0% | |
| GGAGACCCACAGAAAAATGG+GGG | - | chr1.3:75507685-75507704 | None:intergenic | 50.0% | |
| TAATTGCAGCATCCCTGCTC+TGG | + | chr1.3:75507924-75507943 | MS.gene71830:CDS | 50.0% | |
| TCCCTTCCTTGCAGAAGATG+GGG | - | chr1.3:75507827-75507846 | None:intergenic | 50.0% | |
| ! | GGATGTGTTCGGGCCAATTT+TGG | + | chr1.3:75507847-75507866 | MS.gene71830:CDS | 50.0% |
| !! | AGTGGGTTAGCTACTCTGCT+CGG | - | chr1.3:75507709-75507728 | None:intergenic | 50.0% |
| AATCCTTCGACTCTCACCGC+CGG | - | chr1.3:75507880-75507899 | None:intergenic | 55.0% | |
| ACTACCCGAGCAGATCCTTC+CGG | + | chr1.3:75507175-75507194 | MS.gene71830:CDS | 55.0% | |
| AGTCGTTGACGGCGAAGTTG+AGG | - | chr1.3:75507158-75507177 | None:intergenic | 55.0% | |
| CCATCTTCTGCAAGGAAGGG+AGG | + | chr1.3:75507826-75507845 | MS.gene71830:CDS | 55.0% | |
| CCCCCATCTTCTGCAAGGAA+GGG | + | chr1.3:75507823-75507842 | MS.gene71830:CDS | 55.0% | |
| CCCTTCCTTGCAGAAGATGG+GGG | - | chr1.3:75507826-75507845 | None:intergenic | 55.0% | |
| CCTCCCTTCCTTGCAGAAGA+TGG | - | chr1.3:75507829-75507848 | None:intergenic | 55.0% | |
| CGAAGTTGAGGAGTCCGACA+CGG | - | chr1.3:75507146-75507165 | None:intergenic | 55.0% | |
| CTTCTCCCCCATCTTCTGCA+AGG | + | chr1.3:75507818-75507837 | MS.gene71830:CDS | 55.0% | |
| CTTGCAGAAGATGGGGGAGA+AGG | - | chr1.3:75507820-75507839 | None:intergenic | 55.0% | |
| GACCCACAGAAAAATGGGGG+CGG | - | chr1.3:75507682-75507701 | None:intergenic | 55.0% | |
| GGCGGAGACCCACAGAAAAA+TGG | - | chr1.3:75507688-75507707 | None:intergenic | 55.0% | |
| TCCCCCATCTTCTGCAAGGA+AGG | + | chr1.3:75507822-75507841 | MS.gene71830:CDS | 55.0% | |
| TCTGCTCGGGTAGTCGTTGA+CGG | - | chr1.3:75507169-75507188 | None:intergenic | 55.0% | |
| AATCCGGCGGTGAGAGTCGA+AGG | + | chr1.3:75507874-75507893 | MS.gene71830:CDS | 60.0% | |
| ACCCATGACGACGGTGAGAG+GGG | - | chr1.3:75507769-75507788 | None:intergenic | 60.0% | |
| AGAAGGTGGCAGACCGGATG+GGG | - | chr1.3:75507803-75507822 | None:intergenic | 60.0% | |
| AGTTGAGGAGTCCGACACGG+CGG | - | chr1.3:75507143-75507162 | None:intergenic | 60.0% | |
| CACCCATGACGACGGTGAGA+GGG | - | chr1.3:75507770-75507789 | None:intergenic | 60.0% | |
| GAGAAGGTGGCAGACCGGAT+GGG | - | chr1.3:75507804-75507823 | None:intergenic | 60.0% | |
| GATCCTTCCGGTGGCATCTC+AGG | + | chr1.3:75507187-75507206 | MS.gene71830:CDS | 60.0% | |
| GCAGAAGATGGGGGAGAAGG+TGG | - | chr1.3:75507817-75507836 | None:intergenic | 60.0% | |
| GGAACCACCACCCATGACGA+CGG | - | chr1.3:75507778-75507797 | None:intergenic | 60.0% | |
| TCACCTGAGATGCCACCGGA+AGG | - | chr1.3:75507193-75507212 | None:intergenic | 60.0% | |
| TGCCACCGGAAGGATCTGCT+CGG | - | chr1.3:75507183-75507202 | None:intergenic | 60.0% | |
| !! | CGCCGCCCCCATTTTTCTGT+GGG | + | chr1.3:75507677-75507696 | MS.gene71830:CDS | 60.0% |
| !! | GGGTTAGCTACTCTGCTCGG+CGG | - | chr1.3:75507706-75507725 | None:intergenic | 60.0% |
| !! | TCGCCGCCCCCATTTTTCTG+TGG | + | chr1.3:75507676-75507695 | MS.gene71830:CDS | 60.0% |
| ACCCGAGCAGATCCTTCCGG+TGG | + | chr1.3:75507178-75507197 | MS.gene71830:CDS | 65.0% | |
| CCACCCATGACGACGGTGAG+AGG | - | chr1.3:75507771-75507790 | None:intergenic | 65.0% | |
| CCTCTCACCGTCGTCATGGG+TGG | + | chr1.3:75507768-75507787 | MS.gene71830:CDS | 65.0% | |
| CTCACCGTCGTCATGGGTGG+TGG | + | chr1.3:75507771-75507790 | MS.gene71830:CDS | 65.0% | |
| GAAAAATGGGGGCGGCGACG+AGG | - | chr1.3:75507674-75507693 | None:intergenic | 65.0% | |
| GCCACCGGAAGGATCTGCTC+GGG | - | chr1.3:75507182-75507201 | None:intergenic | 65.0% | |
| GCCCCTCTCACCGTCGTCAT+GGG | + | chr1.3:75507765-75507784 | MS.gene71830:CDS | 65.0% | |
| GCGGGGCTTAGGGCAAACGA+CGG | - | chr1.3:75507124-75507143 | None:intergenic | 65.0% | |
| GGAGAAGGTGGCAGACCGGA+TGG | - | chr1.3:75507805-75507824 | None:intergenic | 65.0% | |
| GTGGTGGTTCCTGCCCCATC+CGG | + | chr1.3:75507787-75507806 | MS.gene71830:CDS | 65.0% | |
| GTTGAGGAGTCCGACACGGC+GGG | - | chr1.3:75507142-75507161 | None:intergenic | 65.0% | |
| TGGGGGAGAAGGTGGCAGAC+CGG | - | chr1.3:75507809-75507828 | None:intergenic | 65.0% | |
| TTGAGGAGTCCGACACGGCG+GGG | - | chr1.3:75507141-75507160 | None:intergenic | 65.0% | |
| AGTCCGACACGGCGGGGCTT+AGG | - | chr1.3:75507135-75507154 | None:intergenic | 70.0% | |
| CGCCCCTCTCACCGTCGTCA+TGG | + | chr1.3:75507764-75507783 | MS.gene71830:CDS | 70.0% | |
| GTCCGACACGGCGGGGCTTA+GGG | - | chr1.3:75507134-75507153 | None:intergenic | 70.0% | |
| TGCCCTAAGCCCCGCCGTGT+CGG | + | chr1.3:75507129-75507148 | MS.gene71830:CDS | 70.0% | |
| GGCGGCGACGAGGCTACTGG+AGG | - | chr1.3:75507664-75507683 | None:intergenic | 75.0% | |
| GGTGGCAGACCGGATGGGGC+AGG | - | chr1.3:75507799-75507818 | None:intergenic | 75.0% | |
| ! | GGGGGCGGCGACGAGGCTAC+TGG | - | chr1.3:75507667-75507686 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 75507105 | 75507951 | 75507105 | ID=MS.gene71830 |
| chr1.3 | mRNA | 75507105 | 75507951 | 75507105 | ID=MS.gene71830.t1;Parent=MS.gene71830 |
| chr1.3 | exon | 75507105 | 75507208 | 75507105 | ID=MS.gene71830.t1.exon1;Parent=MS.gene71830.t1 |
| chr1.3 | CDS | 75507105 | 75507208 | 75507105 | ID=cds.MS.gene71830.t1;Parent=MS.gene71830.t1 |
| chr1.3 | exon | 75507660 | 75507951 | 75507660 | ID=MS.gene71830.t1.exon2;Parent=MS.gene71830.t1 |
| chr1.3 | CDS | 75507660 | 75507951 | 75507660 | ID=cds.MS.gene71830.t1;Parent=MS.gene71830.t1 |
| Gene Sequence |
| Protein sequence |
