Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72113.t1 | XP_024638557.1 | 99 | 594 | 6 | 0 | 1 | 594 | 159 | 752 | 0.00E+00 | 1195.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72113.t1 | A0A396ICJ7 | 99.0 | 594 | 6 | 0 | 1 | 594 | 159 | 752 | 0.0e+00 | 1195.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene72113 | 0.81776 | 2.79E-52 | -1.69E-46 |
| MS.gene049404 | MS.gene72113 | 0.804162 | 2.47E-49 | -1.69E-46 |
| MS.gene049501 | MS.gene72113 | 0.800298 | 1.54E-48 | -1.69E-46 |
| MS.gene049824 | MS.gene72113 | 0.803664 | 3.13E-49 | -1.69E-46 |
| MS.gene049825 | MS.gene72113 | 0.805703 | 1.17E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene72113 | 0.816348 | 5.79E-52 | -1.69E-46 |
| MS.gene050020 | MS.gene72113 | 0.838072 | 3.57E-57 | -1.69E-46 |
| MS.gene050478 | MS.gene72113 | 0.803681 | 3.10E-49 | -1.69E-46 |
| MS.gene050546 | MS.gene72113 | 0.80521 | 1.49E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene72113 | 0.823838 | 1.12E-53 | -1.69E-46 |
| MS.gene050959 | MS.gene72113 | 0.812565 | 3.98E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene72113 | 0.80334 | 3.65E-49 | -1.69E-46 |
| MS.gene051265 | MS.gene72113 | 0.809938 | 1.48E-50 | -1.69E-46 |
| MS.gene051388 | MS.gene72113 | 0.804678 | 1.93E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene72113 | 0.813757 | 2.18E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene72113 | 0.849177 | 3.82E-60 | -1.69E-46 |
| MS.gene051720 | MS.gene72113 | 0.837132 | 6.23E-57 | -1.69E-46 |
| MS.gene052020 | MS.gene72113 | 0.821866 | 3.21E-53 | -1.69E-46 |
| MS.gene052323 | MS.gene72113 | 0.824678 | 7.09E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene72113 | 0.80519 | 1.50E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene72113 | 0.801496 | 8.76E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene72113 | 0.842828 | 2.04E-58 | -1.69E-46 |
| MS.gene052665 | MS.gene72113 | 0.828169 | 1.04E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene72113 | 0.813193 | 2.90E-51 | -1.69E-46 |
| MS.gene053054 | MS.gene72113 | -0.805412 | 1.35E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene72113 | 0.808197 | 3.49E-50 | -1.69E-46 |
| MS.gene053221 | MS.gene72113 | 0.832427 | 9.51E-56 | -1.69E-46 |
| MS.gene053226 | MS.gene72113 | 0.840789 | 7.04E-58 | -1.69E-46 |
| MS.gene054584 | MS.gene72113 | 0.8186 | 1.80E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene72113 | 0.802438 | 5.61E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene72113 | 0.820881 | 5.43E-53 | -1.69E-46 |
| MS.gene055356 | MS.gene72113 | 0.811816 | 5.79E-51 | -1.69E-46 |
| MS.gene055357 | MS.gene72113 | 0.82052 | 6.57E-53 | -1.69E-46 |
| MS.gene055358 | MS.gene72113 | 0.818746 | 1.67E-52 | -1.69E-46 |
| MS.gene055465 | MS.gene72113 | 0.800951 | 1.13E-48 | -1.69E-46 |
| MS.gene055466 | MS.gene72113 | 0.836313 | 1.01E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene72113 | 0.812341 | 4.45E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene72113 | 0.832372 | 9.81E-56 | -1.69E-46 |
| MS.gene055580 | MS.gene72113 | -0.817994 | 2.47E-52 | -1.69E-46 |
| MS.gene055778 | MS.gene72113 | 0.801333 | 9.46E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene72113 | 0.822199 | 2.69E-53 | -1.69E-46 |
| MS.gene056366 | MS.gene72113 | 0.802301 | 5.99E-49 | -1.69E-46 |
| MS.gene056553 | MS.gene72113 | 0.816736 | 4.74E-52 | -1.69E-46 |
| MS.gene056643 | MS.gene72113 | 0.802561 | 5.29E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene72113 | 0.811827 | 5.76E-51 | -1.69E-46 |
| MS.gene057314 | MS.gene72113 | 0.804082 | 2.56E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene72113 | 0.803953 | 2.72E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene72113 | 0.824093 | 9.73E-54 | -1.69E-46 |
| MS.gene05954 | MS.gene72113 | 0.8024 | 5.71E-49 | -1.69E-46 |
| MS.gene059937 | MS.gene72113 | 0.814573 | 1.44E-51 | -1.69E-46 |
| MS.gene060137 | MS.gene72113 | -0.816317 | 5.89E-52 | -1.69E-46 |
| MS.gene060587 | MS.gene72113 | 0.864088 | 1.56E-64 | -1.69E-46 |
| MS.gene060803 | MS.gene72113 | 0.818867 | 1.57E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72113.t1 | AT1G62870 | 69.595 | 592 | 173 | 4 | 4 | 594 | 176 | 761 | 0.0 | 871 |
| MS.gene72113.t1 | AT1G12380 | 67.993 | 603 | 174 | 3 | 8 | 594 | 193 | 792 | 0.0 | 860 |
Find 116 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAGGTGTTAAGTGTTTAA+AGG | 0.179151 | 8.1:+21632409 | None:intergenic |
| TGCTTCTGCAATGTTGAATT+TGG | 0.192176 | 8.1:+21632550 | None:intergenic |
| TGTTGCAGCTCATTCTAAAT+TGG | 0.242757 | 8.1:-21632027 | MS.gene72113:CDS |
| GATAGGAATGCTAGAGAAAT+TGG | 0.288023 | 8.1:-21632737 | MS.gene72113:CDS |
| ATCTGGTGGGAAAGATGATT+TGG | 0.300628 | 8.1:-21633647 | MS.gene72113:CDS |
| CAACAGCATTTGATGTTATC+TGG | 0.310012 | 8.1:-21633664 | MS.gene72113:CDS |
| TGTACACAGTCTGGCTAAAT+TGG | 0.310273 | 8.1:-21632672 | MS.gene72113:CDS |
| ATCCTCATCTTTCCAGTAAC+AGG | 0.323697 | 8.1:+21632245 | None:intergenic |
| CACAAAGTAGTAGACTTGTT+TGG | 0.330300 | 8.1:-21632214 | MS.gene72113:CDS |
| TTGGACAATGCCTTCTCCTT+TGG | 0.333611 | 8.1:-21632607 | MS.gene72113:CDS |
| TTGAATGAGGTTCTTGTTGA+TGG | 0.336816 | 8.1:-21631930 | MS.gene72113:CDS |
| TGCTGACAAGTTCAAATCTA+AGG | 0.339805 | 8.1:-21633116 | MS.gene72113:CDS |
| AAGGAGAGAGATCCTGTTAC+TGG | 0.341550 | 8.1:-21632257 | MS.gene72113:CDS |
| ACAAAGTAGTAGACTTGTTT+GGG | 0.360154 | 8.1:-21632213 | MS.gene72113:CDS |
| CAAACAAGTCTACTACTTTG+TGG | 0.365663 | 8.1:+21632215 | None:intergenic |
| TCAATTACACGTCTCAAATT+CGG | 0.370717 | 8.1:-21632946 | MS.gene72113:CDS |
| AGTTGATTGAAAGAAGGTTT+AGG | 0.373620 | 8.1:-21632517 | MS.gene72113:CDS |
| CGGTCACACATGGTTGCTTC+GGG | 0.373854 | 8.1:-21632891 | MS.gene72113:CDS |
| TTATGAAAATGATCAGAGTT+TGG | 0.374759 | 8.1:-21633293 | MS.gene72113:CDS |
| TGCCAAGTTTGAAGAAGTTA+AGG | 0.378541 | 8.1:-21633386 | MS.gene72113:CDS |
| CTATACAAACTTGTCCCATT+TGG | 0.380205 | 8.1:+21633250 | None:intergenic |
| ACGGTCACACATGGTTGCTT+CGG | 0.388677 | 8.1:-21632892 | MS.gene72113:CDS |
| TTCTTTCAAATTGCTTCTGA+TGG | 0.392257 | 8.1:-21633331 | MS.gene72113:CDS |
| TCCTCAATCATTGCATAAAC+AGG | 0.393964 | 8.1:+21632830 | None:intergenic |
| GAAAGATGATTTGGGAGCTT+TGG | 0.396032 | 8.1:-21633638 | MS.gene72113:CDS |
| TTCAAATTGCTTCTGATGGA+TGG | 0.399644 | 8.1:-21633327 | MS.gene72113:CDS |
| GGAGTTTGTTGGGTCAAGAT+TGG | 0.402126 | 8.1:-21633410 | MS.gene72113:CDS |
| CTACAAGACTTCATTGGATA+AGG | 0.406023 | 8.1:-21632066 | MS.gene72113:CDS |
| TTCTAATGGAACTCATGAAA+TGG | 0.406533 | 8.1:-21632325 | MS.gene72113:CDS |
| CTTGTGGATTCAAATGTAGT+TGG | 0.410468 | 8.1:-21632121 | MS.gene72113:CDS |
| GTAAGAAAAGCTCTAAACTT+TGG | 0.410545 | 8.1:+21633463 | None:intergenic |
| TGAAGCACACATTGTTCTAA+TGG | 0.410821 | 8.1:-21632339 | MS.gene72113:CDS |
| AACCTTAACTTCTTCAAACT+TGG | 0.416616 | 8.1:+21633384 | None:intergenic |
| TCAACATCTTTCTCTTGCTC+AGG | 0.417080 | 8.1:+21632392 | None:intergenic |
| TCAGGTGTTAAGTGTTTAAA+GGG | 0.421429 | 8.1:+21632410 | None:intergenic |
| ACATGGAGAATCAGAATCAT+TGG | 0.423257 | 8.1:-21633084 | MS.gene72113:CDS |
| TTCCTTCATGCAACTTCTTG+TGG | 0.424624 | 8.1:-21632137 | MS.gene72113:CDS |
| CTCATTCTAAATTGGAAAGA+AGG | 0.427992 | 8.1:-21632019 | MS.gene72113:CDS |
| TGTACTGCTTGTGCGTAAAC+CGG | 0.435337 | 8.1:+21632284 | None:intergenic |
| GAGACAGAAAAGCCATTAGT+TGG | 0.444589 | 8.1:-21632626 | MS.gene72113:CDS |
| TCTTCCAATGCGGGAGTTTG+AGG | 0.444808 | 8.1:-21632867 | MS.gene72113:CDS |
| AATCTAGTTCAGAATTGTGT+TGG | 0.445074 | 8.1:-21633145 | MS.gene72113:CDS |
| GATTGAGGATACGTTGAGTT+CGG | 0.448139 | 8.1:-21632816 | MS.gene72113:CDS |
| AGATGGTATCCATGGAAGAT+AGG | 0.448392 | 8.1:-21632754 | MS.gene72113:CDS |
| TTGACAGTGAATCTTCCAAA+TGG | 0.449405 | 8.1:-21633265 | MS.gene72113:CDS |
| TTCGGTTCGCGCGTTGCAGT+TGG | 0.449435 | 8.1:-21632798 | MS.gene72113:CDS |
| TTAACTGAGTTCAAATCCTT+AGG | 0.452871 | 8.1:-21632182 | MS.gene72113:CDS |
| GTAGTTGGTCTATGTGGAAA+TGG | 0.454067 | 8.1:-21632106 | MS.gene72113:CDS |
| TAGAAAAGTTGATTGAAAGA+AGG | 0.462069 | 8.1:-21632523 | MS.gene72113:CDS |
| TCTGGTGGGAAAGATGATTT+GGG | 0.468138 | 8.1:-21633646 | MS.gene72113:CDS |
| TGAGGACAAAAGTGAAAGAT+TGG | 0.468665 | 8.1:-21632577 | MS.gene72113:CDS |
| TGGTCACTACAAGACTTCAT+TGG | 0.470764 | 8.1:-21632072 | MS.gene72113:CDS |
| TCTAGCATTCCTATCTTCCA+TGG | 0.471509 | 8.1:+21632745 | None:intergenic |
| ATCTAGTTCAGAATTGTGTT+GGG | 0.471787 | 8.1:-21633144 | MS.gene72113:CDS |
| AATCTCTCTTGTCAGTATCA+AGG | 0.473208 | 8.1:-21633055 | MS.gene72113:CDS |
| GCTTCGGGTTCTTCCAATGC+GGG | 0.486782 | 8.1:-21632876 | MS.gene72113:CDS |
| AGAAGGCATTGTCCAACTAA+TGG | 0.486961 | 8.1:+21632614 | None:intergenic |
| TTCTCCTTTGGAATGAGTTG+AGG | 0.487848 | 8.1:-21632595 | MS.gene72113:CDS |
| GAGACAATAACTGGCATTTG+TGG | 0.491614 | 8.1:-21633169 | MS.gene72113:CDS |
| ACATCCTCAGCATAATTTGA+AGG | 0.492140 | 8.1:+21633199 | None:intergenic |
| TTTAGAAGCTGTACACAGTC+TGG | 0.504458 | 8.1:-21632681 | MS.gene72113:CDS |
| TTTATCAAGTGATGAAGATA+AGG | 0.505171 | 8.1:-21631994 | MS.gene72113:CDS |
| CCTCACTGCAACTCTTCCTA+AGG | 0.506302 | 8.1:+21632166 | None:intergenic |
| ATGTATGAAGCAGCCCAAGC+AGG | 0.507965 | 8.1:+21632482 | None:intergenic |
| GTGTCTCTTATTAGATAAAG+AGG | 0.508446 | 8.1:+21632452 | None:intergenic |
| TGACAGTGAATCTTCCAAAT+GGG | 0.509190 | 8.1:-21633264 | MS.gene72113:CDS |
| TTTGGGAGCTTTGGCTATGT+TGG | 0.514552 | 8.1:-21633629 | MS.gene72113:CDS |
| TCATTCTAAATTGGAAAGAA+GGG | 0.520569 | 8.1:-21632018 | MS.gene72113:CDS |
| CGCACAAGCAGTACAAATGA+AGG | 0.524982 | 8.1:-21632276 | MS.gene72113:CDS |
| TCAAATGTAGTTGGTCTATG+TGG | 0.530064 | 8.1:-21632112 | MS.gene72113:CDS |
| CTCATGAAATGGAGAACAGA+AGG | 0.531262 | 8.1:-21632314 | MS.gene72113:CDS |
| ACCTGTTTATGCAATGATTG+AGG | 0.531813 | 8.1:-21632831 | MS.gene72113:CDS |
| AAATCCTCAAACTCCCGCAT+TGG | 0.532883 | 8.1:+21632863 | None:intergenic |
| TCTTGACGAACCGTTCAAGA+TGG | 0.534809 | 8.1:-21632771 | MS.gene72113:CDS |
| AGACAATAACTGGCATTTGT+GGG | 0.535105 | 8.1:-21633168 | MS.gene72113:CDS |
| AAATATCAATTGCAAGAGTA+CGG | 0.542887 | 8.1:-21632911 | MS.gene72113:CDS |
| AAGAGTCCTAAAACTTCACC+TGG | 0.545061 | 8.1:-21633586 | MS.gene72113:CDS |
| GGTGACATGATTCGCGACAT+CGG | 0.550994 | 8.1:-21632716 | MS.gene72113:CDS |
| GATTGGGTTTATGAATCTTG+TGG | 0.555580 | 8.1:-21633514 | MS.gene72113:CDS |
| TTAAGTGTTTAAAGGGTGGA+AGG | 0.557431 | 8.1:+21632417 | None:intergenic |
| ACCGTTCAAGATGGTATCCA+TGG | 0.558865 | 8.1:-21632762 | MS.gene72113:CDS |
| TTGTCCTCAACTCATTCCAA+AGG | 0.563057 | 8.1:+21632591 | None:intergenic |
| TGCTGCGTCACAACCCGCAT+CGG | 0.563700 | 8.1:+21633685 | None:intergenic |
| AGCATTTGATGTTATCTGGT+GGG | 0.563721 | 8.1:-21633660 | MS.gene72113:CDS |
| TCAGTCACTGTTCGAAACAA+AGG | 0.564033 | 8.1:+21632995 | None:intergenic |
| TGTATGAAGCAGCCCAAGCA+GGG | 0.569953 | 8.1:+21632483 | None:intergenic |
| ATCTAAGGCATTGAGAAACA+TGG | 0.571358 | 8.1:-21633101 | MS.gene72113:CDS |
| GAGAACAGAAGGGCTCGATC+CGG | 0.572165 | 8.1:-21632303 | MS.gene72113:CDS |
| GAACTGTTCACCTTGGCAAA+TGG | 0.573141 | 8.1:-21631966 | MS.gene72113:CDS |
| TGTTCCTTCAAATTATGCTG+AGG | 0.577746 | 8.1:-21633203 | MS.gene72113:CDS |
| CTTGACCCAACAAACTCCCT+AGG | 0.588286 | 8.1:+21633415 | None:intergenic |
| GGTGTTAAGTGTTTAAAGGG+TGG | 0.589597 | 8.1:+21632413 | None:intergenic |
| GTCTTCTGAAGAACAACCCC+AGG | 0.590445 | 8.1:+21633568 | None:intergenic |
| ATCCACAAGAAGTTGCATGA+AGG | 0.590910 | 8.1:+21632135 | None:intergenic |
| ATTGGTGAAAGACATGGCTA+AGG | 0.592530 | 8.1:-21632654 | MS.gene72113:CDS |
| TCAACTCATTCCAAAGGAGA+AGG | 0.594477 | 8.1:+21632597 | None:intergenic |
| TGGAAATGGATTTGTTCTCA+TGG | 0.594609 | 8.1:-21632092 | MS.gene72113:CDS |
| TCCATGGATACCATCTTGAA+CGG | 0.597722 | 8.1:+21632761 | None:intergenic |
| CAGCATTTGATGTTATCTGG+TGG | 0.600050 | 8.1:-21633661 | MS.gene72113:CDS |
| AGTGACTGAGAATTGTATGA+AGG | 0.616650 | 8.1:-21632981 | MS.gene72113:CDS |
| TGCAAGAGTACGGTCACACA+TGG | 0.618761 | 8.1:-21632901 | MS.gene72113:CDS |
| TTAAGGTTGAATCAGAAGCA+AGG | 0.619888 | 8.1:-21633369 | MS.gene72113:CDS |
| TGCTTCGGGTTCTTCCAATG+CGG | 0.623184 | 8.1:-21632877 | MS.gene72113:CDS |
| ATCATCATCACCATTTGCCA+AGG | 0.624197 | 8.1:+21631956 | None:intergenic |
| GGAGAATCAGAATCATTGGA+TGG | 0.629128 | 8.1:-21633080 | MS.gene72113:CDS |
| GGCTAAATTGGTGAAAGACA+TGG | 0.629979 | 8.1:-21632660 | MS.gene72113:CDS |
| GGATGCAGAACTGTTCACCT+TGG | 0.638346 | 8.1:-21631973 | MS.gene72113:CDS |
| TATCTAATAAGAGACACTAG+TGG | 0.651479 | 8.1:-21632446 | MS.gene72113:CDS |
| AGAGTCCTAAAACTTCACCT+GGG | 0.658334 | 8.1:-21633585 | MS.gene72113:CDS |
| TGATGATGATGTGTTGAATG+AGG | 0.662088 | 8.1:-21631943 | MS.gene72113:CDS |
| TCATGAAATGGAGAACAGAA+GGG | 0.667704 | 8.1:-21632313 | MS.gene72113:CDS |
| GAGTCCTAAAACTTCACCTG+GGG | 0.686178 | 8.1:-21633584 | MS.gene72113:CDS |
| ATGTTGATAGACTTATAACA+AGG | 0.697658 | 8.1:-21632376 | MS.gene72113:CDS |
| CCTTAGGAAGAGTTGCAGTG+AGG | 0.701591 | 8.1:-21632166 | MS.gene72113:CDS |
| ATCCTGTTACTGGAAAGATG+AGG | 0.722202 | 8.1:-21632247 | MS.gene72113:CDS |
| ATGAAGCAGCCCAAGCAGGG+TGG | 0.733916 | 8.1:+21632486 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGGTTTTAATAGTTTAATCA+AGG | - | chr8.1:21632568-21632587 | MS.gene72113:CDS | 20.0% |
| !!! | TATTGATTTTTTAGCTGATT+GGG | - | chr8.1:21632073-21632092 | MS.gene72113:CDS | 20.0% |
| ! | AAATATCAATTGCAAGAGTA+CGG | - | chr8.1:21632692-21632711 | MS.gene72113:CDS | 25.0% |
| ! | TCATTCTAAATTGGAAAGAA+GGG | - | chr8.1:21633585-21633604 | MS.gene72113:CDS | 25.0% |
| ! | TTATGAAAATGATCAGAGTT+TGG | - | chr8.1:21632310-21632329 | MS.gene72113:CDS | 25.0% |
| ! | TTTATCAAGTGATGAAGATA+AGG | - | chr8.1:21633609-21633628 | MS.gene72113:CDS | 25.0% |
| !! | ATGTTGATAGACTTATAACA+AGG | - | chr8.1:21633227-21633246 | MS.gene72113:CDS | 25.0% |
| !! | TAGAAAAGTTGATTGAAAGA+AGG | - | chr8.1:21633080-21633099 | MS.gene72113:CDS | 25.0% |
| !!! | CTATTGATTTTTTAGCTGAT+TGG | - | chr8.1:21632072-21632091 | MS.gene72113:CDS | 25.0% |
| AACCTTAACTTCTTCAAACT+TGG | + | chr8.1:21632222-21632241 | None:intergenic | 30.0% | |
| AGTTGATTGAAAGAAGGTTT+AGG | - | chr8.1:21633086-21633105 | MS.gene72113:CDS | 30.0% | |
| CTCATTCTAAATTGGAAAGA+AGG | - | chr8.1:21633584-21633603 | MS.gene72113:CDS | 30.0% | |
| GTGTCTCTTATTAGATAAAG+AGG | + | chr8.1:21633154-21633173 | None:intergenic | 30.0% | |
| TATCTAATAAGAGACACTAG+TGG | - | chr8.1:21633157-21633176 | MS.gene72113:CDS | 30.0% | |
| TCAATTACACGTCTCAAATT+CGG | - | chr8.1:21632657-21632676 | MS.gene72113:CDS | 30.0% | |
| TCAGGTGTTAAGTGTTTAAA+GGG | + | chr8.1:21633196-21633215 | None:intergenic | 30.0% | |
| TTAACTGAGTTCAAATCCTT+AGG | - | chr8.1:21633421-21633440 | MS.gene72113:CDS | 30.0% | |
| TTCTAATGGAACTCATGAAA+TGG | - | chr8.1:21633278-21633297 | MS.gene72113:CDS | 30.0% | |
| TTCTTTCAAATTGCTTCTGA+TGG | - | chr8.1:21632272-21632291 | MS.gene72113:CDS | 30.0% | |
| ! | AATCTAGTTCAGAATTGTGT+TGG | - | chr8.1:21632458-21632477 | MS.gene72113:CDS | 30.0% |
| ! | ACAAAGTAGTAGACTTGTTT+GGG | - | chr8.1:21633390-21633409 | MS.gene72113:CDS | 30.0% |
| ! | ATCTAGTTCAGAATTGTGTT+GGG | - | chr8.1:21632459-21632478 | MS.gene72113:CDS | 30.0% |
| !! | GTAAGAAAAGCTCTAAACTT+TGG | + | chr8.1:21632143-21632162 | None:intergenic | 30.0% |
| !!! | TTCTGTTTCTTTTTCGAGTT+TGG | - | chr8.1:21632112-21632131 | MS.gene72113:CDS | 30.0% |
| AATCTCTCTTGTCAGTATCA+AGG | - | chr8.1:21632548-21632567 | MS.gene72113:CDS | 35.0% | |
| ACATCCTCAGCATAATTTGA+AGG | + | chr8.1:21632407-21632426 | None:intergenic | 35.0% | |
| ACATGGAGAATCAGAATCAT+TGG | - | chr8.1:21632519-21632538 | MS.gene72113:CDS | 35.0% | |
| ACCTGTTTATGCAATGATTG+AGG | - | chr8.1:21632772-21632791 | MS.gene72113:CDS | 35.0% | |
| AGACAATAACTGGCATTTGT+GGG | - | chr8.1:21632435-21632454 | MS.gene72113:CDS | 35.0% | |
| AGCATTTGATGTTATCTGGT+GGG | - | chr8.1:21631943-21631962 | MS.gene72113:CDS | 35.0% | |
| AGTGACTGAGAATTGTATGA+AGG | - | chr8.1:21632622-21632641 | MS.gene72113:CDS | 35.0% | |
| CAAACAAGTCTACTACTTTG+TGG | + | chr8.1:21633391-21633410 | None:intergenic | 35.0% | |
| CAACAGCATTTGATGTTATC+TGG | - | chr8.1:21631939-21631958 | MS.gene72113:CDS | 35.0% | |
| CTACAAGACTTCATTGGATA+AGG | - | chr8.1:21633537-21633556 | MS.gene72113:CDS | 35.0% | |
| CTATACAAACTTGTCCCATT+TGG | + | chr8.1:21632356-21632375 | None:intergenic | 35.0% | |
| CTCAGGTGTTAAGTGTTTAA+AGG | + | chr8.1:21633197-21633216 | None:intergenic | 35.0% | |
| CTTGTGGATTCAAATGTAGT+TGG | - | chr8.1:21633482-21633501 | MS.gene72113:CDS | 35.0% | |
| GATAGGAATGCTAGAGAAAT+TGG | - | chr8.1:21632866-21632885 | MS.gene72113:CDS | 35.0% | |
| GATTGGGTTTATGAATCTTG+TGG | - | chr8.1:21632089-21632108 | MS.gene72113:CDS | 35.0% | |
| TCATGAAATGGAGAACAGAA+GGG | - | chr8.1:21633290-21633309 | MS.gene72113:CDS | 35.0% | |
| TCCTCAATCATTGCATAAAC+AGG | + | chr8.1:21632776-21632795 | None:intergenic | 35.0% | |
| TGAAGCACACATTGTTCTAA+TGG | - | chr8.1:21633264-21633283 | MS.gene72113:CDS | 35.0% | |
| TGACAGTGAATCTTCCAAAT+GGG | - | chr8.1:21632339-21632358 | MS.gene72113:CDS | 35.0% | |
| TGAGGACAAAAGTGAAAGAT+TGG | - | chr8.1:21633026-21633045 | MS.gene72113:CDS | 35.0% | |
| TGCCAAGTTTGAAGAAGTTA+AGG | - | chr8.1:21632217-21632236 | MS.gene72113:CDS | 35.0% | |
| TGCTGACAAGTTCAAATCTA+AGG | - | chr8.1:21632487-21632506 | MS.gene72113:CDS | 35.0% | |
| TGCTTCTGCAATGTTGAATT+TGG | + | chr8.1:21633056-21633075 | None:intergenic | 35.0% | |
| TGTTCCTTCAAATTATGCTG+AGG | - | chr8.1:21632400-21632419 | MS.gene72113:CDS | 35.0% | |
| TGTTGCAGCTCATTCTAAAT+TGG | - | chr8.1:21633576-21633595 | MS.gene72113:CDS | 35.0% | |
| TTAAGGTTGAATCAGAAGCA+AGG | - | chr8.1:21632234-21632253 | MS.gene72113:CDS | 35.0% | |
| TTAAGTGTTTAAAGGGTGGA+AGG | + | chr8.1:21633189-21633208 | None:intergenic | 35.0% | |
| TTCAAATTGCTTCTGATGGA+TGG | - | chr8.1:21632276-21632295 | MS.gene72113:CDS | 35.0% | |
| TTGAATGAGGTTCTTGTTGA+TGG | - | chr8.1:21633673-21633692 | MS.gene72113:CDS | 35.0% | |
| TTGACAGTGAATCTTCCAAA+TGG | - | chr8.1:21632338-21632357 | MS.gene72113:CDS | 35.0% | |
| ! | AGAGCTTTTCTTACACAAGT+TGG | - | chr8.1:21632149-21632168 | MS.gene72113:CDS | 35.0% |
| ! | ATTATGCTGAGGATGTTTTG+TGG | - | chr8.1:21632411-21632430 | MS.gene72113:CDS | 35.0% |
| ! | CACAAAGTAGTAGACTTGTT+TGG | - | chr8.1:21633389-21633408 | MS.gene72113:CDS | 35.0% |
| ! | TCAAATGTAGTTGGTCTATG+TGG | - | chr8.1:21633491-21633510 | MS.gene72113:CDS | 35.0% |
| ! | TGATGATGATGTGTTGAATG+AGG | - | chr8.1:21633660-21633679 | MS.gene72113:CDS | 35.0% |
| ! | TGGAAATGGATTTGTTCTCA+TGG | - | chr8.1:21633511-21633530 | MS.gene72113:CDS | 35.0% |
| ! | TTATGCTGAGGATGTTTTGT+GGG | - | chr8.1:21632412-21632431 | MS.gene72113:CDS | 35.0% |
| !! | ATCTAAGGCATTGAGAAACA+TGG | - | chr8.1:21632502-21632521 | MS.gene72113:CDS | 35.0% |
| !! | TTTTTCCTAGGGAGTTTGTT+GGG | - | chr8.1:21632183-21632202 | MS.gene72113:CDS | 35.0% |
| !!! | AGAAGAGCTGTTTTTGTGAA+TGG | - | chr8.1:21632374-21632393 | MS.gene72113:CDS | 35.0% |
| AAGAGTCCTAAAACTTCACC+TGG | - | chr8.1:21632017-21632036 | MS.gene72113:CDS | 40.0% | |
| ACAAACTCCCTAGGAAAAAC+AGG | + | chr8.1:21632182-21632201 | None:intergenic | 40.0% | |
| AGAGTCCTAAAACTTCACCT+GGG | - | chr8.1:21632018-21632037 | MS.gene72113:CDS | 40.0% | |
| AGATGGTATCCATGGAAGAT+AGG | - | chr8.1:21632849-21632868 | MS.gene72113:CDS | 40.0% | |
| ATCATCATCACCATTTGCCA+AGG | + | chr8.1:21633650-21633669 | None:intergenic | 40.0% | |
| ATCCACAAGAAGTTGCATGA+AGG | + | chr8.1:21633471-21633490 | None:intergenic | 40.0% | |
| ATCCTCATCTTTCCAGTAAC+AGG | + | chr8.1:21633361-21633380 | None:intergenic | 40.0% | |
| ATCCTGTTACTGGAAAGATG+AGG | - | chr8.1:21633356-21633375 | MS.gene72113:CDS | 40.0% | |
| ATCTGGTGGGAAAGATGATT+TGG | - | chr8.1:21631956-21631975 | MS.gene72113:CDS | 40.0% | |
| ATTGGTGAAAGACATGGCTA+AGG | - | chr8.1:21632949-21632968 | MS.gene72113:CDS | 40.0% | |
| CAGCATTTGATGTTATCTGG+TGG | - | chr8.1:21631942-21631961 | MS.gene72113:CDS | 40.0% | |
| CTCATGAAATGGAGAACAGA+AGG | - | chr8.1:21633289-21633308 | MS.gene72113:CDS | 40.0% | |
| GAGACAATAACTGGCATTTG+TGG | - | chr8.1:21632434-21632453 | MS.gene72113:CDS | 40.0% | |
| GAGACAGAAAAGCCATTAGT+TGG | - | chr8.1:21632977-21632996 | MS.gene72113:CDS | 40.0% | |
| GATTGAGGATACGTTGAGTT+CGG | - | chr8.1:21632787-21632806 | MS.gene72113:CDS | 40.0% | |
| GGAGAATCAGAATCATTGGA+TGG | - | chr8.1:21632523-21632542 | MS.gene72113:CDS | 40.0% | |
| GGCTAAATTGGTGAAAGACA+TGG | - | chr8.1:21632943-21632962 | MS.gene72113:CDS | 40.0% | |
| GGTGTTAAGTGTTTAAAGGG+TGG | + | chr8.1:21633193-21633212 | None:intergenic | 40.0% | |
| TCAACATCTTTCTCTTGCTC+AGG | + | chr8.1:21633214-21633233 | None:intergenic | 40.0% | |
| TCAACTCATTCCAAAGGAGA+AGG | + | chr8.1:21633009-21633028 | None:intergenic | 40.0% | |
| TCAGTCACTGTTCGAAACAA+AGG | + | chr8.1:21632611-21632630 | None:intergenic | 40.0% | |
| TCCATGGATACCATCTTGAA+CGG | + | chr8.1:21632845-21632864 | None:intergenic | 40.0% | |
| TCTAGCATTCCTATCTTCCA+TGG | + | chr8.1:21632861-21632880 | None:intergenic | 40.0% | |
| TCTGGTGGGAAAGATGATTT+GGG | - | chr8.1:21631957-21631976 | MS.gene72113:CDS | 40.0% | |
| TGGTCACTACAAGACTTCAT+TGG | - | chr8.1:21633531-21633550 | MS.gene72113:CDS | 40.0% | |
| TGTACACAGTCTGGCTAAAT+TGG | - | chr8.1:21632931-21632950 | MS.gene72113:CDS | 40.0% | |
| TTCCTTCATGCAACTTCTTG+TGG | - | chr8.1:21633466-21633485 | MS.gene72113:CDS | 40.0% | |
| TTGTCCTCAACTCATTCCAA+AGG | + | chr8.1:21633015-21633034 | None:intergenic | 40.0% | |
| TTTAGAAGCTGTACACAGTC+TGG | - | chr8.1:21632922-21632941 | MS.gene72113:CDS | 40.0% | |
| ! | GAAAGATGATTTGGGAGCTT+TGG | - | chr8.1:21631965-21631984 | MS.gene72113:CDS | 40.0% |
| ! | GTAGTTGGTCTATGTGGAAA+TGG | - | chr8.1:21633497-21633516 | MS.gene72113:CDS | 40.0% |
| ! | GTTTTGTGGGAGACAATAAC+TGG | - | chr8.1:21632425-21632444 | MS.gene72113:CDS | 40.0% |
| ! | GTTTTTCCTAGGGAGTTTGT+TGG | - | chr8.1:21632182-21632201 | MS.gene72113:CDS | 40.0% |
| !! | AGAAGGCATTGTCCAACTAA+TGG | + | chr8.1:21632992-21633011 | None:intergenic | 40.0% |
| !! | TTCTCCTTTGGAATGAGTTG+AGG | - | chr8.1:21633008-21633027 | MS.gene72113:CDS | 40.0% |
| !! | TTTGCCACCTGTTTTTCCTA+GGG | - | chr8.1:21632172-21632191 | MS.gene72113:CDS | 40.0% |
| AAATCCTCAAACTCCCGCAT+TGG | + | chr8.1:21632743-21632762 | None:intergenic | 45.0% | |
| AACTCCCTAGGAAAAACAGG+TGG | + | chr8.1:21632179-21632198 | None:intergenic | 45.0% | |
| AAGGAGAGAGATCCTGTTAC+TGG | - | chr8.1:21633346-21633365 | MS.gene72113:CDS | 45.0% | |
| ACCGTTCAAGATGGTATCCA+TGG | - | chr8.1:21632841-21632860 | MS.gene72113:CDS | 45.0% | |
| CGCACAAGCAGTACAAATGA+AGG | - | chr8.1:21633327-21633346 | MS.gene72113:CDS | 45.0% | |
| GAAAAACTACCACCCTGCTT+GGG | - | chr8.1:21633108-21633127 | MS.gene72113:CDS | 45.0% | |
| GAACTGTTCACCTTGGCAAA+TGG | - | chr8.1:21633637-21633656 | MS.gene72113:CDS | 45.0% | |
| GAGTCCTAAAACTTCACCTG+GGG | - | chr8.1:21632019-21632038 | MS.gene72113:CDS | 45.0% | |
| TCTTGACGAACCGTTCAAGA+TGG | - | chr8.1:21632832-21632851 | MS.gene72113:CDS | 45.0% | |
| TGTACTGCTTGTGCGTAAAC+CGG | + | chr8.1:21633322-21633341 | None:intergenic | 45.0% | |
| TTGGACAATGCCTTCTCCTT+TGG | - | chr8.1:21632996-21633015 | MS.gene72113:CDS | 45.0% | |
| ! | ACAACCCCAGGTGAAGTTTT+AGG | + | chr8.1:21632026-21632045 | None:intergenic | 45.0% |
| ! | TTTGGGAGCTTTGGCTATGT+TGG | - | chr8.1:21631974-21631993 | MS.gene72113:CDS | 45.0% |
| !! | GGAGTTTGTTGGGTCAAGAT+TGG | - | chr8.1:21632193-21632212 | MS.gene72113:CDS | 45.0% |
| !! | GTTTGCCACCTGTTTTTCCT+AGG | - | chr8.1:21632171-21632190 | MS.gene72113:CDS | 45.0% |
| !!! | TGATTCGCGACATCGGTTTT+TGG | - | chr8.1:21632894-21632913 | MS.gene72113:CDS | 45.0% |
| ACGGTCACACATGGTTGCTT+CGG | - | chr8.1:21632711-21632730 | MS.gene72113:CDS | 50.0% | |
| ATGTATGAAGCAGCCCAAGC+AGG | + | chr8.1:21633124-21633143 | None:intergenic | 50.0% | |
| CCTCACTGCAACTCTTCCTA+AGG | + | chr8.1:21633440-21633459 | None:intergenic | 50.0% | |
| CCTTAGGAAGAGTTGCAGTG+AGG | - | chr8.1:21633437-21633456 | MS.gene72113:CDS | 50.0% | |
| CTTGACCCAACAAACTCCCT+AGG | + | chr8.1:21632191-21632210 | None:intergenic | 50.0% | |
| GGAAAAACTACCACCCTGCT+TGG | - | chr8.1:21633107-21633126 | MS.gene72113:CDS | 50.0% | |
| GGATGCAGAACTGTTCACCT+TGG | - | chr8.1:21633630-21633649 | MS.gene72113:CDS | 50.0% | |
| GGTGACATGATTCGCGACAT+CGG | - | chr8.1:21632887-21632906 | MS.gene72113:CDS | 50.0% | |
| TCTTCCAATGCGGGAGTTTG+AGG | - | chr8.1:21632736-21632755 | MS.gene72113:CDS | 50.0% | |
| TGTATGAAGCAGCCCAAGCA+GGG | + | chr8.1:21633123-21633142 | None:intergenic | 50.0% | |
| ! | GTCTTCTGAAGAACAACCCC+AGG | + | chr8.1:21632038-21632057 | None:intergenic | 50.0% |
| ! | TGCAAGAGTACGGTCACACA+TGG | - | chr8.1:21632702-21632721 | MS.gene72113:CDS | 50.0% |
| ! | TGCTTCGGGTTCTTCCAATG+CGG | - | chr8.1:21632726-21632745 | MS.gene72113:CDS | 50.0% |
| CGGTCACACATGGTTGCTTC+GGG | - | chr8.1:21632712-21632731 | MS.gene72113:CDS | 55.0% | |
| GAGAACAGAAGGGCTCGATC+CGG | - | chr8.1:21633300-21633319 | MS.gene72113:CDS | 55.0% | |
| ! | GCTTCGGGTTCTTCCAATGC+GGG | - | chr8.1:21632727-21632746 | MS.gene72113:CDS | 55.0% |
| ATGAAGCAGCCCAAGCAGGG+TGG | + | chr8.1:21633120-21633139 | None:intergenic | 60.0% | |
| ! | TTCGGTTCGCGCGTTGCAGT+TGG | - | chr8.1:21632805-21632824 | MS.gene72113:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 21631921 | 21633704 | 21631921 | ID=MS.gene72113 |
| chr8.1 | mRNA | 21631921 | 21633704 | 21631921 | ID=MS.gene72113.t1;Parent=MS.gene72113 |
| chr8.1 | exon | 21631921 | 21633704 | 21631921 | ID=MS.gene72113.t1.exon1;Parent=MS.gene72113.t1 |
| chr8.1 | CDS | 21631921 | 21633704 | 21631921 | ID=cds.MS.gene72113.t1;Parent=MS.gene72113.t1 |
| Gene Sequence |
| Protein sequence |
