Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72178.t1 | XP_024629048.1 | 95.6 | 272 | 12 | 0 | 1 | 272 | 1 | 272 | 1.40E-149 | 538.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72178.t1 | Q9FMS6 | 64.7 | 266 | 90 | 3 | 9 | 270 | 12 | 277 | 2.9e-92 | 339.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72178.t1 | I3SR57 | 95.6 | 272 | 12 | 0 | 1 | 272 | 1 | 272 | 9.9e-150 | 538.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051837 | MS.gene72178 | 0.808318 | 3.28E-50 | -1.69E-46 |
| MS.gene051959 | MS.gene72178 | 0.805825 | 1.11E-49 | -1.69E-46 |
| MS.gene051960 | MS.gene72178 | 0.801649 | 8.15E-49 | -1.69E-46 |
| MS.gene052053 | MS.gene72178 | 0.810442 | 1.15E-50 | -1.69E-46 |
| MS.gene052091 | MS.gene72178 | 0.854792 | 9.72E-62 | -1.69E-46 |
| MS.gene053932 | MS.gene72178 | 0.820787 | 5.70E-53 | -1.69E-46 |
| MS.gene055549 | MS.gene72178 | 0.850694 | 1.44E-60 | -1.69E-46 |
| MS.gene055550 | MS.gene72178 | 0.862595 | 4.53E-64 | -1.69E-46 |
| MS.gene055551 | MS.gene72178 | 0.846166 | 2.58E-59 | -1.69E-46 |
| MS.gene056365 | MS.gene72178 | 0.811071 | 8.41E-51 | -1.69E-46 |
| MS.gene057093 | MS.gene72178 | 0.804461 | 2.14E-49 | -1.69E-46 |
| MS.gene057167 | MS.gene72178 | 0.818569 | 1.83E-52 | -1.69E-46 |
| MS.gene058628 | MS.gene72178 | 0.811592 | 6.48E-51 | -1.69E-46 |
| MS.gene058630 | MS.gene72178 | 0.810484 | 1.13E-50 | -1.69E-46 |
| MS.gene06023 | MS.gene72178 | 0.805051 | 1.61E-49 | -1.69E-46 |
| MS.gene060964 | MS.gene72178 | 0.816198 | 6.26E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72178 | MS.gene065709 | PPI |
| MS.gene72178 | MS.gene025629 | PPI |
| MS.gene72178 | MS.gene065707 | PPI |
| MS.gene72178 | MS.gene034815 | PPI |
| MS.gene72178 | MS.gene034816 | PPI |
| MS.gene72178 | MS.gene72978 | PPI |
| MS.gene72178 | MS.gene41100 | PPI |
| MS.gene72178 | MS.gene41097 | PPI |
| MS.gene72178 | MS.gene000609 | PPI |
| MS.gene72178 | MS.gene72977 | PPI |
| MS.gene72178 | MS.gene21541 | PPI |
| MS.gene72178 | MS.gene053225 | PPI |
| MS.gene72178 | MS.gene007154 | PPI |
| MS.gene72178 | MS.gene41101 | PPI |
| MS.gene72178 | MS.gene025628 | PPI |
| MS.gene72178 | MS.gene065708 | PPI |
| MS.gene034250 | MS.gene72178 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72178.t1 | AT5G22250 | 64.662 | 266 | 90 | 3 | 9 | 270 | 12 | 277 | 6.40e-120 | 344 |
| MS.gene72178.t1 | AT3G44260 | 61.132 | 265 | 98 | 3 | 9 | 270 | 17 | 279 | 4.51e-116 | 335 |
| MS.gene72178.t1 | AT2G32070 | 50.746 | 268 | 127 | 5 | 4 | 270 | 5 | 268 | 4.63e-92 | 273 |
| MS.gene72178.t1 | AT5G10960 | 50.562 | 267 | 128 | 4 | 4 | 270 | 5 | 267 | 7.14e-91 | 270 |
| MS.gene72178.t1 | AT1G80780 | 49.064 | 267 | 132 | 4 | 4 | 270 | 5 | 267 | 1.27e-88 | 265 |
| MS.gene72178.t1 | AT1G80780 | 49.064 | 267 | 132 | 4 | 4 | 270 | 5 | 267 | 1.27e-88 | 265 |
| MS.gene72178.t1 | AT1G80780 | 49.064 | 267 | 132 | 4 | 4 | 270 | 5 | 267 | 1.73e-88 | 265 |
| MS.gene72178.t1 | AT1G15920 | 47.407 | 270 | 134 | 5 | 5 | 269 | 10 | 276 | 8.64e-81 | 245 |
| MS.gene72178.t1 | AT1G15920 | 47.407 | 270 | 134 | 5 | 5 | 269 | 10 | 276 | 8.64e-81 | 245 |
| MS.gene72178.t1 | AT1G61470 | 37.037 | 243 | 130 | 7 | 13 | 249 | 4 | 229 | 1.14e-38 | 137 |
| MS.gene72178.t1 | AT1G06450 | 33.700 | 273 | 157 | 9 | 1 | 268 | 1 | 254 | 1.51e-38 | 138 |
| MS.gene72178.t1 | AT1G27820 | 35.510 | 245 | 143 | 5 | 7 | 248 | 2 | 234 | 8.44e-34 | 125 |
| MS.gene72178.t1 | AT1G27890 | 35.565 | 239 | 139 | 5 | 13 | 248 | 3 | 229 | 1.60e-32 | 121 |
| MS.gene72178.t1 | AT3G44240 | 35.242 | 227 | 132 | 7 | 25 | 249 | 3 | 216 | 3.77e-32 | 119 |
Find 62 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCACAGCGCTTATGATTT+TGG | 0.104590 | 4.1:+6060696 | MS.gene72178:CDS |
| ATCAAATTCAACCTCTAAAT+TGG | 0.207989 | 4.1:-6060265 | None:intergenic |
| GATGGCAACCTTCCTCATTT+TGG | 0.210731 | 4.1:+6060468 | MS.gene72178:CDS |
| AAACACGCTGGGGTACTATT+TGG | 0.216392 | 4.1:+6060993 | MS.gene72178:CDS |
| GCTGAATTGATGCTCACTTC+TGG | 0.258268 | 4.1:+6060639 | MS.gene72178:CDS |
| CAATCATCATCCGTCAAGTT+TGG | 0.286714 | 4.1:+6060238 | MS.gene72178:CDS |
| TCTTCAACAAATCAGTTGTT+TGG | 0.295934 | 4.1:+6060667 | MS.gene72178:CDS |
| AACGGTTCGGCAGATTCCTT+CGG | 0.352418 | 4.1:-6060740 | None:intergenic |
| CTTAACGTGGGTCGGGTTGC+TGG | 0.360050 | 4.1:+6060879 | MS.gene72178:CDS |
| AGATGACGGCGGTCAACTTT+GGG | 0.368577 | 4.1:-6060360 | None:intergenic |
| CTTCAACAAATCAGTTGTTT+GGG | 0.376564 | 4.1:+6060668 | MS.gene72178:CDS |
| GGACAAATAGCCGCTACATA+TGG | 0.395638 | 4.1:+6060490 | MS.gene72178:CDS |
| ACGGTTCGGCAGATTCCTTC+GGG | 0.395658 | 4.1:-6060739 | None:intergenic |
| AATCATCATCCGTCAAGTTT+GGG | 0.414340 | 4.1:+6060239 | MS.gene72178:CDS |
| AAGATGACGGCGGTCAACTT+TGG | 0.418710 | 4.1:-6060361 | None:intergenic |
| GAATCTGCCGAACCGTTTAG+AGG | 0.420121 | 4.1:+6060746 | MS.gene72178:CDS |
| AGTTTGGGCATCCAATTTAG+AGG | 0.424325 | 4.1:+6060254 | MS.gene72178:CDS |
| TCCATGGATACTGAATTTCC+AGG | 0.437255 | 4.1:+6060324 | MS.gene72178:CDS |
| GGTTGCCATCACCATCAGAT+AGG | 0.449581 | 4.1:-6060455 | None:intergenic |
| CAAACTTGACGGATGATGAT+TGG | 0.450788 | 4.1:-6060237 | None:intergenic |
| TACTCATTTCTTGAATAATG+AGG | 0.477666 | 4.1:+6060965 | MS.gene72178:CDS |
| TGACCACTATCGTTACTTGA+AGG | 0.492905 | 4.1:+6060392 | MS.gene72178:CDS |
| GACAAATAGCCGCTACATAT+GGG | 0.500452 | 4.1:+6060491 | MS.gene72178:CDS |
| CAATTGAGCCTTGGTTGTAA+AGG | 0.504025 | 4.1:-6060548 | None:intergenic |
| TGCGCTTGAAGTCAATCCCT+TGG | 0.505546 | 4.1:-6060584 | None:intergenic |
| TCAATATCCTTTCATCTCCA+TGG | 0.506697 | 4.1:+6060308 | MS.gene72178:CDS |
| TACAACACTTAACGTGGGTC+GGG | 0.508105 | 4.1:+6060872 | MS.gene72178:CDS |
| AATTGGATGCCCAAACTTGA+CGG | 0.510297 | 4.1:-6060248 | None:intergenic |
| ACCTGGAAATTCAGTATCCA+TGG | 0.514112 | 4.1:-6060325 | None:intergenic |
| AGGTTCTGCAACGCTTTGTA+CGG | 0.515634 | 4.1:+6060831 | MS.gene72178:CDS |
| TTCAAGCGCAATTTATCTCA+TGG | 0.520248 | 4.1:+6060597 | MS.gene72178:CDS |
| CAGATAGGGTGATACCAACT+TGG | 0.523809 | 4.1:-6060440 | None:intergenic |
| GATATTGATTGACAACTTGA+CGG | 0.523978 | 4.1:-6060293 | None:intergenic |
| GCATGCATTTAAGAAAATGA+TGG | 0.528476 | 4.1:+6060941 | MS.gene72178:CDS |
| CTACAACACTTAACGTGGGT+CGG | 0.533742 | 4.1:+6060871 | MS.gene72178:CDS |
| CGGCTATTTGTCCCAAAATG+AGG | 0.540450 | 4.1:-6060480 | None:intergenic |
| GCTGGAAAGTCTCATCAAGC+TGG | 0.542113 | 4.1:+6060897 | MS.gene72178:CDS |
| ATTGACATGCTCTGCCGCCA+AGG | 0.544877 | 4.1:+6060567 | MS.gene72178:CDS |
| AGAGCATGTCAATTGAGCCT+TGG | 0.548111 | 4.1:-6060557 | None:intergenic |
| TTGACATGCTCTGCCGCCAA+GGG | 0.557345 | 4.1:+6060568 | MS.gene72178:CDS |
| GCTTGAAGTCAATCCCTTGG+CGG | 0.562753 | 4.1:-6060581 | None:intergenic |
| GCTCTTAAACTCATCCAAGT+TGG | 0.568904 | 4.1:+6060426 | MS.gene72178:CDS |
| ATGATATGAAACACATGATG+AGG | 0.569362 | 4.1:+6060811 | MS.gene72178:CDS |
| TTGGGTGAATAAATTACACC+TGG | 0.570783 | 4.1:-6060342 | None:intergenic |
| GTTGCCATCACCATCAGATA+GGG | 0.583084 | 4.1:-6060454 | None:intergenic |
| TTCTGCAACGCTTTGTACGG+TGG | 0.584961 | 4.1:+6060834 | MS.gene72178:CDS |
| ATTCAAAATGAACCAGCTGA+AGG | 0.587598 | 4.1:+6060209 | None:intergenic |
| GGTCAGAGGGTTTAAGATGA+CGG | 0.592880 | 4.1:-6060374 | None:intergenic |
| AAGTAACGATAGTGGTCAGA+GGG | 0.593594 | 4.1:-6060387 | None:intergenic |
| TAGTGAAGATATTGACCCGA+AGG | 0.595020 | 4.1:+6060724 | MS.gene72178:CDS |
| TCAGTATCCATGGAGATGAA+AGG | 0.598752 | 4.1:-6060315 | None:intergenic |
| GTTGGTATCACCCTATCTGA+TGG | 0.609828 | 4.1:+6060444 | MS.gene72178:CDS |
| TGACCTTCAAGTAACGATAG+TGG | 0.622378 | 4.1:-6060395 | None:intergenic |
| TATTTGTCCCAAAATGAGGA+AGG | 0.623706 | 4.1:-6060476 | None:intergenic |
| AGTCGCTACAACACTTAACG+TGG | 0.625698 | 4.1:+6060866 | MS.gene72178:CDS |
| CAAGTAACGATAGTGGTCAG+AGG | 0.631701 | 4.1:-6060388 | None:intergenic |
| GAGCATGACCTTTACAACCA+AGG | 0.646186 | 4.1:+6060540 | MS.gene72178:CDS |
| AGTTGAATTCCCATATGTAG+CGG | 0.649610 | 4.1:-6060500 | None:intergenic |
| GATCAGATAGTTTGTTGACG+TGG | 0.660381 | 4.1:+6060919 | MS.gene72178:CDS |
| ATCACCCTATCTGATGGTGA+TGG | 0.683961 | 4.1:+6060450 | MS.gene72178:CDS |
| GTCGCTACAACACTTAACGT+GGG | 0.701411 | 4.1:+6060867 | MS.gene72178:CDS |
| CAGAGGGTTTAAGATGACGG+CGG | 0.736962 | 4.1:-6060371 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTAAAAAGTCCTCTAAA+CGG | - | chr4.1:6060761-6060780 | None:intergenic | 20.0% |
| ! | ATCAAATTCAACCTCTAAAT+TGG | - | chr4.1:6060268-6060287 | None:intergenic | 25.0% |
| ! | TACTCATTTCTTGAATAATG+AGG | + | chr4.1:6060965-6060984 | MS.gene72178:CDS | 25.0% |
| ATGATATGAAACACATGATG+AGG | + | chr4.1:6060811-6060830 | MS.gene72178:CDS | 30.0% | |
| CTTCAACAAATCAGTTGTTT+GGG | + | chr4.1:6060668-6060687 | MS.gene72178:CDS | 30.0% | |
| GCATGCATTTAAGAAAATGA+TGG | + | chr4.1:6060941-6060960 | MS.gene72178:CDS | 30.0% | |
| TCTTCAACAAATCAGTTGTT+TGG | + | chr4.1:6060667-6060686 | MS.gene72178:CDS | 30.0% | |
| ! | GATATTGATTGACAACTTGA+CGG | - | chr4.1:6060296-6060315 | None:intergenic | 30.0% |
| AAAAAGTCCTCTAAACGGTT+CGG | - | chr4.1:6060756-6060775 | None:intergenic | 35.0% | |
| AATCATCATCCGTCAAGTTT+GGG | + | chr4.1:6060239-6060258 | MS.gene72178:CDS | 35.0% | |
| AGTTGAATTCCCATATGTAG+CGG | - | chr4.1:6060503-6060522 | None:intergenic | 35.0% | |
| TATTTGTCCCAAAATGAGGA+AGG | - | chr4.1:6060479-6060498 | None:intergenic | 35.0% | |
| TCAATATCCTTTCATCTCCA+TGG | + | chr4.1:6060308-6060327 | MS.gene72178:CDS | 35.0% | |
| TTCAAGCGCAATTTATCTCA+TGG | + | chr4.1:6060597-6060616 | MS.gene72178:CDS | 35.0% | |
| TTGGGTGAATAAATTACACC+TGG | - | chr4.1:6060345-6060364 | None:intergenic | 35.0% | |
| ! | TTCACAGCGCTTATGATTTT+GGG | + | chr4.1:6060697-6060716 | MS.gene72178:CDS | 35.0% |
| ! | TTTCACAGCGCTTATGATTT+TGG | + | chr4.1:6060696-6060715 | MS.gene72178:CDS | 35.0% |
| AATTGGATGCCCAAACTTGA+CGG | - | chr4.1:6060251-6060270 | None:intergenic | 40.0% | |
| ACCTGGAAATTCAGTATCCA+TGG | - | chr4.1:6060328-6060347 | None:intergenic | 40.0% | |
| AGTTTGGGCATCCAATTTAG+AGG | + | chr4.1:6060254-6060273 | MS.gene72178:CDS | 40.0% | |
| CAATCATCATCCGTCAAGTT+TGG | + | chr4.1:6060238-6060257 | MS.gene72178:CDS | 40.0% | |
| CAATTGAGCCTTGGTTGTAA+AGG | - | chr4.1:6060551-6060570 | None:intergenic | 40.0% | |
| GACAAATAGCCGCTACATAT+GGG | + | chr4.1:6060491-6060510 | MS.gene72178:CDS | 40.0% | |
| GCTCTTAAACTCATCCAAGT+TGG | + | chr4.1:6060426-6060445 | MS.gene72178:CDS | 40.0% | |
| TAGTGAAGATATTGACCCGA+AGG | + | chr4.1:6060724-6060743 | MS.gene72178:CDS | 40.0% | |
| TCAGTATCCATGGAGATGAA+AGG | - | chr4.1:6060318-6060337 | None:intergenic | 40.0% | |
| TCCATGGATACTGAATTTCC+AGG | + | chr4.1:6060324-6060343 | MS.gene72178:CDS | 40.0% | |
| TGACCACTATCGTTACTTGA+AGG | + | chr4.1:6060392-6060411 | MS.gene72178:CDS | 40.0% | |
| TGACCTTCAAGTAACGATAG+TGG | - | chr4.1:6060398-6060417 | None:intergenic | 40.0% | |
| ! | AAGTAACGATAGTGGTCAGA+GGG | - | chr4.1:6060390-6060409 | None:intergenic | 40.0% |
| ! | ATGGCAACCTTCCTCATTTT+GGG | + | chr4.1:6060469-6060488 | MS.gene72178:CDS | 40.0% |
| ! | CAAACTTGACGGATGATGAT+TGG | - | chr4.1:6060240-6060259 | None:intergenic | 40.0% |
| !! | GATCAGATAGTTTGTTGACG+TGG | + | chr4.1:6060919-6060938 | MS.gene72178:CDS | 40.0% |
| AATGAGGCTCAAAAACACGC+TGG | + | chr4.1:6060981-6061000 | MS.gene72178:CDS | 45.0% | |
| AGAGCATGTCAATTGAGCCT+TGG | - | chr4.1:6060560-6060579 | None:intergenic | 45.0% | |
| AGGTTCTGCAACGCTTTGTA+CGG | + | chr4.1:6060831-6060850 | MS.gene72178:CDS | 45.0% | |
| AGTCGCTACAACACTTAACG+TGG | + | chr4.1:6060866-6060885 | MS.gene72178:CDS | 45.0% | |
| ATGAGGCTCAAAAACACGCT+GGG | + | chr4.1:6060982-6061001 | MS.gene72178:CDS | 45.0% | |
| CAGATAGGGTGATACCAACT+TGG | - | chr4.1:6060443-6060462 | None:intergenic | 45.0% | |
| CGGCTATTTGTCCCAAAATG+AGG | - | chr4.1:6060483-6060502 | None:intergenic | 45.0% | |
| CTACAACACTTAACGTGGGT+CGG | + | chr4.1:6060871-6060890 | MS.gene72178:CDS | 45.0% | |
| GAGCATGACCTTTACAACCA+AGG | + | chr4.1:6060540-6060559 | MS.gene72178:CDS | 45.0% | |
| GCTGAATTGATGCTCACTTC+TGG | + | chr4.1:6060639-6060658 | MS.gene72178:CDS | 45.0% | |
| GGACAAATAGCCGCTACATA+TGG | + | chr4.1:6060490-6060509 | MS.gene72178:CDS | 45.0% | |
| GTCGCTACAACACTTAACGT+GGG | + | chr4.1:6060867-6060886 | MS.gene72178:CDS | 45.0% | |
| GTTGCCATCACCATCAGATA+GGG | - | chr4.1:6060457-6060476 | None:intergenic | 45.0% | |
| GTTGGTATCACCCTATCTGA+TGG | + | chr4.1:6060444-6060463 | MS.gene72178:CDS | 45.0% | |
| TACAACACTTAACGTGGGTC+GGG | + | chr4.1:6060872-6060891 | MS.gene72178:CDS | 45.0% | |
| ! | AAACACGCTGGGGTACTATT+TGG | + | chr4.1:6060993-6061012 | MS.gene72178:CDS | 45.0% |
| ! | ATCACCCTATCTGATGGTGA+TGG | + | chr4.1:6060450-6060469 | MS.gene72178:CDS | 45.0% |
| ! | CAAGTAACGATAGTGGTCAG+AGG | - | chr4.1:6060391-6060410 | None:intergenic | 45.0% |
| ! | GATGGCAACCTTCCTCATTT+TGG | + | chr4.1:6060468-6060487 | MS.gene72178:CDS | 45.0% |
| ! | GGTCAGAGGGTTTAAGATGA+CGG | - | chr4.1:6060377-6060396 | None:intergenic | 45.0% |
| !!! | TGATTGGCTTTTCCTTCAGC+TGG | - | chr4.1:6060224-6060243 | None:intergenic | 45.0% |
| !!! | AATATTTTAACAATATTATT+TGG | + | chr4.1:6060777-6060796 | MS.gene72178:CDS | 5.0% |
| GAATCTGCCGAACCGTTTAG+AGG | + | chr4.1:6060746-6060765 | MS.gene72178:CDS | 50.0% | |
| GCTGGAAAGTCTCATCAAGC+TGG | + | chr4.1:6060897-6060916 | MS.gene72178:CDS | 50.0% | |
| GCTTGAAGTCAATCCCTTGG+CGG | - | chr4.1:6060584-6060603 | None:intergenic | 50.0% | |
| GGTTGCCATCACCATCAGAT+AGG | - | chr4.1:6060458-6060477 | None:intergenic | 50.0% | |
| TGAGGCTCAAAAACACGCTG+GGG | + | chr4.1:6060983-6061002 | MS.gene72178:CDS | 50.0% | |
| TGCGCTTGAAGTCAATCCCT+TGG | - | chr4.1:6060587-6060606 | None:intergenic | 50.0% | |
| TTCTGCAACGCTTTGTACGG+TGG | + | chr4.1:6060834-6060853 | MS.gene72178:CDS | 50.0% | |
| ! | AACGGTTCGGCAGATTCCTT+CGG | - | chr4.1:6060743-6060762 | None:intergenic | 50.0% |
| ! | AAGATGACGGCGGTCAACTT+TGG | - | chr4.1:6060364-6060383 | None:intergenic | 50.0% |
| ! | AGATGACGGCGGTCAACTTT+GGG | - | chr4.1:6060363-6060382 | None:intergenic | 50.0% |
| ! | CAGAGGGTTTAAGATGACGG+CGG | - | chr4.1:6060374-6060393 | None:intergenic | 50.0% |
| ATTGACATGCTCTGCCGCCA+AGG | + | chr4.1:6060567-6060586 | MS.gene72178:CDS | 55.0% | |
| TTGACATGCTCTGCCGCCAA+GGG | + | chr4.1:6060568-6060587 | MS.gene72178:CDS | 55.0% | |
| ! | ACGGTTCGGCAGATTCCTTC+GGG | - | chr4.1:6060742-6060761 | None:intergenic | 55.0% |
| ! | CTTAACGTGGGTCGGGTTGC+TGG | + | chr4.1:6060879-6060898 | MS.gene72178:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 6060216 | 6061034 | 6060216 | ID=MS.gene72178 |
| chr4.1 | mRNA | 6060216 | 6061034 | 6060216 | ID=MS.gene72178.t1;Parent=MS.gene72178 |
| chr4.1 | exon | 6060216 | 6061034 | 6060216 | ID=MS.gene72178.t1.exon1;Parent=MS.gene72178.t1 |
| chr4.1 | CDS | 6060216 | 6061034 | 6060216 | ID=cds.MS.gene72178.t1;Parent=MS.gene72178.t1 |
| Gene Sequence |
| Protein sequence |
