AlfalfaGEDB | MS.gene72978

M. sativa cultivar XinJiangDaYe / MS.gene72978

KEGG: K12581
GO: GO:0003674 GO:0003676 GO:0005488 GO:0097159 GO:1901363
PFAM: PF04857.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene72978.t1	XP_024633362.1	98.6	288	4	0	1	288	1	288	1.80E-160	575.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene72978.t1	Q9FMS6	61.8	272	95	5	16	285	12	276	1.2e-88	327.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene72978.t1	A0A396JQM4	77.1	332	32	1	1	288	1	332	2.2e-139	504.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene72978	MS.gene85904	PPI
MS.gene81219	MS.gene72978	PPI
MS.gene72978	MS.gene030414	PPI
MS.gene72978	MS.gene84309	PPI
MS.gene053225	MS.gene72978	PPI
MS.gene53120	MS.gene72978	PPI
MS.gene72978	MS.gene53121	PPI
MS.gene72178	MS.gene72978	PPI
MS.gene72978	MS.gene034438	PPI
MS.gene68798	MS.gene72978	PPI
MS.gene72978	MS.gene85905	PPI
MS.gene72978	MS.gene53119	PPI
MS.gene72978	MS.gene000609	PPI
MS.gene72978	MS.gene55324	PPI
MS.gene72978	MS.gene020895	PPI
MS.gene72978	MS.gene38057	PPI
MS.gene72978	MS.gene72157	PPI
MS.gene034250	MS.gene72978	PPI
MS.gene72978	MS.gene85901	PPI
MS.gene030415	MS.gene72978	PPI
MS.gene72978	MS.gene78556	PPI
MS.gene72978	MS.gene85903	PPI
MS.gene68205	MS.gene72978	PPI
MS.gene72978	MS.gene35431	PPI
MS.gene78557	MS.gene72978	PPI
MS.gene38201	MS.gene72978	PPI
MS.gene72978	MS.gene38199	PPI
MS.gene72978	MS.gene72160	PPI
MS.gene72978	MS.gene72156	PPI
MS.gene72978	MS.gene53123	PPI
MS.gene72978	MS.gene048793	PPI
MS.gene72978	MS.gene048794	PPI
MS.gene72978	MS.gene014264	PPI
MS.gene72978	MS.gene35692	PPI
MS.gene72978	MS.gene53122	PPI
MS.gene070320	MS.gene72978	PPI
MS.gene35444	MS.gene72978	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene72978.t1	AT5G22250	61.765	272	95	5	16	285	12	276	5.24e-114	330
MS.gene72978.t1	AT3G44260	59.928	277	101	4	10	285	11	278	4.25e-112	325
MS.gene72978.t1	AT2G32070	55.185	270	109	5	15	284	9	266	1.12e-97	288
MS.gene72978.t1	AT5G10960	54.815	270	109	5	15	284	9	265	1.83e-94	280
MS.gene72978.t1	AT1G80780	53.333	270	113	5	15	284	9	265	9.15e-93	276
MS.gene72978.t1	AT1G80780	53.333	270	113	5	15	284	9	265	9.15e-93	276
MS.gene72978.t1	AT1G80780	53.333	270	113	5	15	284	9	265	1.30e-92	276
MS.gene72978.t1	AT1G15920	48.718	273	131	5	15	286	13	277	2.63e-85	257
MS.gene72978.t1	AT1G15920	48.718	273	131	5	15	286	13	277	2.63e-85	257
MS.gene72978.t1	AT1G61470	38.057	247	125	8	21	262	5	228	1.69e-39	139
MS.gene72978.t1	AT1G06450	33.948	271	148	9	19	284	10	254	1.74e-39	141
MS.gene72978.t1	AT1G27820	38.039	255	128	10	15	262	3	234	3.81e-37	134
MS.gene72978.t1	AT1G27890	37.349	249	126	9	21	262	4	229	3.98e-33	123
MS.gene72978.t1	AT3G44240	36.052	233	127	7	32	262	3	215	1.37e-31	117

Find 76 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAAGAGCTTGCTGAGTTTC+TGG	0.137768	1.1:-45197344	MS.gene72978:CDS
CGGTTATGATTTCGGATATT+TGG	0.177802	1.1:-45197395	MS.gene72978:CDS
CTGAGTTTCTGGTGCTGGTT+AGG	0.266063	1.1:-45197333	MS.gene72978:CDS
GAGTTTCCATTTCTCAATTT+CGG	0.277287	1.1:+45197628	None:intergenic
TTTCATAGCGGTTATGATTT+CGG	0.281368	1.1:-45197403	MS.gene72978:CDS
TGAGGGGTTGTATGGTGGTT+TGG	0.315361	1.1:-45197260	MS.gene72978:CDS
CTCTGAGGAGTCTCTGATTT+GGG	0.348899	1.1:-45197608	MS.gene72978:CDS
GGTTGTATGGTGGTTTGGAT+AGG	0.356604	1.1:-45197255	MS.gene72978:CDS
ACTCTGAGGAGTCTCTGATT+TGG	0.379462	1.1:-45197609	MS.gene72978:CDS
AGGACAGAGTAGTGGGCAGC+AGG	0.380556	1.1:+45197721	None:intergenic
TATTGAATTGCTGAAGAGTC+AGG	0.387147	1.1:-45197533	MS.gene72978:CDS
AGAAACTCAGCAAGCTCTTC+AGG	0.387400	1.1:+45197346	None:intergenic
AAGATCAAGGAAGTTTACTT+TGG	0.387834	1.1:-45197145	MS.gene72978:CDS
AGATCAAGGAAGTTTACTTT+GGG	0.402765	1.1:-45197144	MS.gene72978:CDS
GTTGTATGGTGGTTTGGATA+GGG	0.410931	1.1:-45197254	MS.gene72978:CDS
TCAATGGACACCGAGTTTCC+CGG	0.417725	1.1:-45197796	MS.gene72978:CDS
CTGCCCACTACTCTGTCCTC+AGG	0.430977	1.1:-45197717	MS.gene72978:CDS
GCTTGCTGAGTTTCTGGTGC+TGG	0.435084	1.1:-45197338	MS.gene72978:CDS
GTTTACTTTGGGAATGATGA+TGG	0.437530	1.1:-45197133	MS.gene72978:CDS
GATAAGTCAGTGATGCCGTC+AGG	0.438524	1.1:+45197760	None:intergenic
GCTGAATTGATGATGAGTTC+CGG	0.441489	1.1:-45197460	MS.gene72978:CDS
TATGGTGGTTTGGATAGGGT+TGG	0.443187	1.1:-45197250	MS.gene72978:CDS
TGAGTTTCTGGTGCTGGTTA+GGG	0.447849	1.1:-45197332	MS.gene72978:CDS
AAGTATGCTGGTGTGTTGTA+TGG	0.453388	1.1:-45197100	MS.gene72978:CDS
CTGAATGTGGATCGGGTTGT+TGG	0.455074	1.1:-45197220	MS.gene72978:CDS
TGTGTAATGAGGAGGTTAGC+TGG	0.455691	1.1:-45197432	MS.gene72978:CDS
AATCTTCCGAAATTGAGAAA+TGG	0.456621	1.1:-45197634	MS.gene72978:CDS
CTGACTTTATCTGATGTTGA+TGG	0.457863	1.1:-45197658	MS.gene72978:CDS
TTCACATCCGATCATTTCAA+TGG	0.460225	1.1:-45197812	MS.gene72978:CDS
ATGGTGGTTTGGATAGGGTT+GGG	0.461650	1.1:-45197249	MS.gene72978:CDS
TGTTTATGATGTGAAGCATT+TGG	0.467019	1.1:-45197293	MS.gene72978:CDS
TCAGGGAGGATGACGACGCC+GGG	0.486550	1.1:+45197778	None:intergenic
GATGTGAATCCACGAATGAC+CGG	0.499249	1.1:+45197827	None:intergenic
AGGAATTTGGGATTGACTCT+AGG	0.499773	1.1:-45197489	MS.gene72978:CDS
GACAGAGTAGTGGGCAGCAG+GGG	0.527192	1.1:+45197723	None:intergenic
GTCAGGGAGGATGACGACGC+CGG	0.530143	1.1:+45197777	None:intergenic
CTCCTCATTACACACAAGTC+CGG	0.531799	1.1:+45197441	None:intergenic
TGAATGTGGATCGGGTTGTT+GGG	0.532840	1.1:-45197219	MS.gene72978:CDS
CAGATAAAGTCAGACCGACT+TGG	0.536256	1.1:+45197668	None:intergenic
AATCAGAGTTCAAACTCATC+CGG	0.539311	1.1:-45197846	MS.gene72978:CDS
CGCCCTGAGGACAGAGTAGT+GGG	0.539360	1.1:+45197714	None:intergenic
CAAACTCATCCGGTCATTCG+TGG	0.539913	1.1:-45197836	MS.gene72978:CDS
GGACAGAGTAGTGGGCAGCA+GGG	0.541030	1.1:+45197722	None:intergenic
GATGACGACGCCGGGAAACT+CGG	0.545201	1.1:+45197786	None:intergenic
TCGGATTGAGATTGATGAAG+TGG	0.551337	1.1:+45197891	None:intergenic
GTGTAATGAGGAGGTTAGCT+GGG	0.552375	1.1:-45197431	MS.gene72978:CDS
GAAGATGCTGAATGTGGATC+GGG	0.556799	1.1:-45197227	MS.gene72978:CDS
AGTGGGCAGCAGGGGTTCGA+TGG	0.562904	1.1:+45197731	None:intergenic
GTTGGGAAGACTCATGAGGC+GGG	0.571775	1.1:-45197202	MS.gene72978:CDS
GTTGTATGGATTAGAAAATG+TGG	0.574852	1.1:-45197086	MS.gene72978:CDS
TTCATCAATCTCAATCCGAC+CGG	0.575331	1.1:-45197887	MS.gene72978:CDS
ATTGAGATTGATGAAGTGGA+GGG	0.577397	1.1:+45197895	None:intergenic
TGATTTCGGATATTTGGTGA+AGG	0.579004	1.1:-45197389	MS.gene72978:CDS
TGCCCACTACTCTGTCCTCA+GGG	0.581136	1.1:-45197716	MS.gene72978:CDS
GATTGAGATTGATGAAGTGG+AGG	0.581983	1.1:+45197894	None:intergenic
ATTGAATTGCTGAAGAGTCA+GGG	0.584201	1.1:-45197532	MS.gene72978:CDS
GGCGTCGTCATCCTCCCTGA+CGG	0.585388	1.1:-45197775	MS.gene72978:CDS
GGAAGATGCTGAATGTGGAT+CGG	0.586905	1.1:-45197228	MS.gene72978:CDS
TCGCCCTGAGGACAGAGTAG+TGG	0.599581	1.1:+45197713	None:intergenic
TGTTGGGAAGACTCATGAGG+CGG	0.605761	1.1:-45197203	MS.gene72978:CDS
CGGACTTGTGTGTAATGAGG+AGG	0.606992	1.1:-45197440	MS.gene72978:CDS
GATTGAATGACCACACCGGT+CGG	0.621202	1.1:+45197872	None:intergenic
ATAAGTCAGTGATGCCGTCA+GGG	0.629101	1.1:+45197761	None:intergenic
TTGAATTGCTGAAGAGTCAG+GGG	0.629903	1.1:-45197531	MS.gene72978:CDS
AATCTTAATATCATCCAAGT+CGG	0.632534	1.1:-45197682	MS.gene72978:CDS
TTCCGGACTTGTGTGTAATG+AGG	0.640291	1.1:-45197443	MS.gene72978:CDS
GGTCAACTGATGAAGTATGC+TGG	0.641076	1.1:-45197112	MS.gene72978:CDS
TCGGTGTCCATTGAAATGAT+CGG	0.650692	1.1:+45197805	None:intergenic
GGTTGGGAAGATGCTGAATG+TGG	0.657129	1.1:-45197233	MS.gene72978:CDS
ATTGAGAAATGGAAACTCTG+AGG	0.667083	1.1:-45197623	MS.gene72978:CDS
GATTATCAACATTCGCCCTG+AGG	0.675401	1.1:+45197701	None:intergenic
CAATCTCAATCCGACCGGTG+TGG	0.685580	1.1:-45197882	MS.gene72978:CDS
GGTTGTTGGGAAGACTCATG+AGG	0.692805	1.1:-45197206	MS.gene72978:CDS
AGTCAGTGATGCCGTCAGGG+AGG	0.718902	1.1:+45197764	None:intergenic
AGCTGGGTGACATTTCATAG+CGG	0.736884	1.1:-45197415	MS.gene72978:CDS
TCGAGATTGAATGACCACAC+CGG	0.757455	1.1:+45197868	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AATCTTAATATCATCCAAGT+CGG	-	chr1.1:45197324-45197343	MS.gene72978:CDS	25.0%
!	TTGAGAAAAACAAGGAATTT+GGG	-	chr1.1:45197505-45197524	MS.gene72978:CDS	25.0%
!	TTTGAGAAAAACAAGGAATT+TGG	-	chr1.1:45197504-45197523	MS.gene72978:CDS	25.0%
!!!	GATTGATTTTGAGAAAAACA+AGG	-	chr1.1:45197497-45197516	MS.gene72978:CDS	25.0%
	AAGATCAAGGAAGTTTACTT+TGG	-	chr1.1:45197861-45197880	MS.gene72978:CDS	30.0%
	AATCTTCCGAAATTGAGAAA+TGG	-	chr1.1:45197372-45197391	MS.gene72978:CDS	30.0%
	AGATCAAGGAAGTTTACTTT+GGG	-	chr1.1:45197862-45197881	MS.gene72978:CDS	30.0%
	GAGTTTCCATTTCTCAATTT+CGG	+	chr1.1:45197381-45197400	None:intergenic	30.0%
	TTTCATAGCGGTTATGATTT+CGG	-	chr1.1:45197603-45197622	MS.gene72978:CDS	30.0%
!	TGTTTATGATGTGAAGCATT+TGG	-	chr1.1:45197713-45197732	MS.gene72978:CDS	30.0%
!!	GTTGTATGGATTAGAAAATG+TGG	-	chr1.1:45197920-45197939	MS.gene72978:CDS	30.0%
	AATCAGAGTTCAAACTCATC+CGG	-	chr1.1:45197160-45197179	MS.gene72978:CDS	35.0%
	ATTGAATTGCTGAAGAGTCA+GGG	-	chr1.1:45197474-45197493	MS.gene72978:CDS	35.0%
	ATTGAGAAATGGAAACTCTG+AGG	-	chr1.1:45197383-45197402	MS.gene72978:CDS	35.0%
	ATTGAGATTGATGAAGTGGA+GGG	+	chr1.1:45197114-45197133	None:intergenic	35.0%
	CGGTTATGATTTCGGATATT+TGG	-	chr1.1:45197611-45197630	MS.gene72978:CDS	35.0%
	CTGACTTTATCTGATGTTGA+TGG	-	chr1.1:45197348-45197367	MS.gene72978:CDS	35.0%
	TATTGAATTGCTGAAGAGTC+AGG	-	chr1.1:45197473-45197492	MS.gene72978:CDS	35.0%
	TTCACATCCGATCATTTCAA+TGG	-	chr1.1:45197194-45197213	MS.gene72978:CDS	35.0%
!	GTTTACTTTGGGAATGATGA+TGG	-	chr1.1:45197873-45197892	MS.gene72978:CDS	35.0%
!	TGATTTCGGATATTTGGTGA+AGG	-	chr1.1:45197617-45197636	MS.gene72978:CDS	35.0%
!!	ATTTGGCAAAGTTTTGTGAG+GGG	-	chr1.1:45197730-45197749	MS.gene72978:CDS	35.0%
!!	CATTTGGCAAAGTTTTGTGA+GGG	-	chr1.1:45197729-45197748	MS.gene72978:CDS	35.0%
!!	TCATGCTTTTAGGAAGATCA+AGG	-	chr1.1:45197848-45197867	MS.gene72978:CDS	35.0%
	AAGTATGCTGGTGTGTTGTA+TGG	-	chr1.1:45197906-45197925	MS.gene72978:CDS	40.0%
	GATTGAGATTGATGAAGTGG+AGG	+	chr1.1:45197115-45197134	None:intergenic	40.0%
	TCGGATTGAGATTGATGAAG+TGG	+	chr1.1:45197118-45197137	None:intergenic	40.0%
	TTCATCAATCTCAATCCGAC+CGG	-	chr1.1:45197119-45197138	MS.gene72978:CDS	40.0%
	TTGAATTGCTGAAGAGTCAG+GGG	-	chr1.1:45197475-45197494	MS.gene72978:CDS	40.0%
!	AGGAATTTGGGATTGACTCT+AGG	-	chr1.1:45197517-45197536	MS.gene72978:CDS	40.0%
!	GTTGTATGGTGGTTTGGATA+GGG	-	chr1.1:45197752-45197771	MS.gene72978:CDS	40.0%
!	TCGGTGTCCATTGAAATGAT+CGG	+	chr1.1:45197204-45197223	None:intergenic	40.0%
!!	AAGTTTTGTGAGGGGTTGTA+TGG	-	chr1.1:45197738-45197757	MS.gene72978:CDS	40.0%
!!	GCATTTGGCAAAGTTTTGTG+AGG	-	chr1.1:45197728-45197747	MS.gene72978:CDS	40.0%
!!	GCTGAATTGATGATGAGTTC+CGG	-	chr1.1:45197546-45197565	MS.gene72978:CDS	40.0%
!!	TGCTGGTTAGGGTTTTCTTT+GGG	-	chr1.1:45197685-45197704	MS.gene72978:CDS	40.0%
!!!	TGCTGACTCTTCATGCTTTT+AGG	-	chr1.1:45197838-45197857	MS.gene72978:CDS	40.0%
	AGAAACTCAGCAAGCTCTTC+AGG	+	chr1.1:45197663-45197682	None:intergenic	45.0%
	AGCTGGGTGACATTTCATAG+CGG	-	chr1.1:45197591-45197610	MS.gene72978:CDS	45.0%
	ATAAGTCAGTGATGCCGTCA+GGG	+	chr1.1:45197248-45197267	None:intergenic	45.0%
	CAGATAAAGTCAGACCGACT+TGG	+	chr1.1:45197341-45197360	None:intergenic	45.0%
	CTCCTCATTACACACAAGTC+CGG	+	chr1.1:45197568-45197587	None:intergenic	45.0%
	GAAGATGCTGAATGTGGATC+GGG	-	chr1.1:45197779-45197798	MS.gene72978:CDS	45.0%
	GATGTGAATCCACGAATGAC+CGG	+	chr1.1:45197182-45197201	None:intergenic	45.0%
	GATTATCAACATTCGCCCTG+AGG	+	chr1.1:45197308-45197327	None:intergenic	45.0%
	GGAAGATGCTGAATGTGGAT+CGG	-	chr1.1:45197778-45197797	MS.gene72978:CDS	45.0%
	GGTCAACTGATGAAGTATGC+TGG	-	chr1.1:45197894-45197913	MS.gene72978:CDS	45.0%
	TCGAGATTGAATGACCACAC+CGG	+	chr1.1:45197141-45197160	None:intergenic	45.0%
	TGTGTAATGAGGAGGTTAGC+TGG	-	chr1.1:45197574-45197593	MS.gene72978:CDS	45.0%
	TTCCGGACTTGTGTGTAATG+AGG	-	chr1.1:45197563-45197582	MS.gene72978:CDS	45.0%
!	ACTCTGAGGAGTCTCTGATT+TGG	-	chr1.1:45197397-45197416	MS.gene72978:CDS	45.0%
!	ATGGTGGTTTGGATAGGGTT+GGG	-	chr1.1:45197757-45197776	MS.gene72978:CDS	45.0%
!	CTCTGAGGAGTCTCTGATTT+GGG	-	chr1.1:45197398-45197417	MS.gene72978:CDS	45.0%
!	GCTGGTTAGGGTTTTCTTTG+GGG	-	chr1.1:45197686-45197705	MS.gene72978:CDS	45.0%
!	GGTTGTATGGTGGTTTGGAT+AGG	-	chr1.1:45197751-45197770	MS.gene72978:CDS	45.0%
!	GTGTAATGAGGAGGTTAGCT+GGG	-	chr1.1:45197575-45197594	MS.gene72978:CDS	45.0%
!	TATGGTGGTTTGGATAGGGT+TGG	-	chr1.1:45197756-45197775	MS.gene72978:CDS	45.0%
!	TGAATGTGGATCGGGTTGTT+GGG	-	chr1.1:45197787-45197806	MS.gene72978:CDS	45.0%
!	TTTTGTGAGGGGTTGTATGG+TGG	-	chr1.1:45197741-45197760	MS.gene72978:CDS	45.0%
!!	TGAAGAGCTTGCTGAGTTTC+TGG	-	chr1.1:45197662-45197681	MS.gene72978:CDS	45.0%
!!	TGAGTTTCTGGTGCTGGTTA+GGG	-	chr1.1:45197674-45197693	MS.gene72978:CDS	45.0%
!!!	GTGCTGGTTAGGGTTTTCTT+TGG	-	chr1.1:45197684-45197703	MS.gene72978:CDS	45.0%
	CAAACTCATCCGGTCATTCG+TGG	-	chr1.1:45197170-45197189	MS.gene72978:CDS	50.0%
	CGGACTTGTGTGTAATGAGG+AGG	-	chr1.1:45197566-45197585	MS.gene72978:CDS	50.0%
	GATAAGTCAGTGATGCCGTC+AGG	+	chr1.1:45197249-45197268	None:intergenic	50.0%
	GATTGAATGACCACACCGGT+CGG	+	chr1.1:45197137-45197156	None:intergenic	50.0%
	GGTTGGGAAGATGCTGAATG+TGG	-	chr1.1:45197773-45197792	MS.gene72978:CDS	50.0%
	GGTTGTTGGGAAGACTCATG+AGG	-	chr1.1:45197800-45197819	MS.gene72978:CDS	50.0%
	TCAATGGACACCGAGTTTCC+CGG	-	chr1.1:45197210-45197229	MS.gene72978:CDS	50.0%
	TGAGGGGTTGTATGGTGGTT+TGG	-	chr1.1:45197746-45197765	MS.gene72978:CDS	50.0%
	TGTTGGGAAGACTCATGAGG+CGG	-	chr1.1:45197803-45197822	MS.gene72978:CDS	50.0%
!	CTGAATGTGGATCGGGTTGT+TGG	-	chr1.1:45197786-45197805	MS.gene72978:CDS	50.0%
!!	CTGAGTTTCTGGTGCTGGTT+AGG	-	chr1.1:45197673-45197692	MS.gene72978:CDS	50.0%
	CAATCTCAATCCGACCGGTG+TGG	-	chr1.1:45197124-45197143	MS.gene72978:CDS	55.0%
	GTTGGGAAGACTCATGAGGC+GGG	-	chr1.1:45197804-45197823	MS.gene72978:CDS	55.0%
	TGCCCACTACTCTGTCCTCA+GGG	-	chr1.1:45197290-45197309	MS.gene72978:CDS	55.0%
!!	GCTTGCTGAGTTTCTGGTGC+TGG	-	chr1.1:45197668-45197687	MS.gene72978:CDS	55.0%
	AGTCAGTGATGCCGTCAGGG+AGG	+	chr1.1:45197245-45197264	None:intergenic	60.0%
	CGCCCTGAGGACAGAGTAGT+GGG	+	chr1.1:45197295-45197314	None:intergenic	60.0%
	CTGCCCACTACTCTGTCCTC+AGG	-	chr1.1:45197289-45197308	MS.gene72978:CDS	60.0%
	GATGACGACGCCGGGAAACT+CGG	+	chr1.1:45197223-45197242	None:intergenic	60.0%
	TCGCCCTGAGGACAGAGTAG+TGG	+	chr1.1:45197296-45197315	None:intergenic	60.0%
!!	AGGACAGAGTAGTGGGCAGC+AGG	+	chr1.1:45197288-45197307	None:intergenic	60.0%
!!	GACAGAGTAGTGGGCAGCAG+GGG	+	chr1.1:45197286-45197305	None:intergenic	60.0%
!!	GGACAGAGTAGTGGGCAGCA+GGG	+	chr1.1:45197287-45197306	None:intergenic	60.0%
	AGTGGGCAGCAGGGGTTCGA+TGG	+	chr1.1:45197278-45197297	None:intergenic	65.0%
	GGCGTCGTCATCCTCCCTGA+CGG	-	chr1.1:45197231-45197250	MS.gene72978:CDS	65.0%
	GTCAGGGAGGATGACGACGC+CGG	+	chr1.1:45197232-45197251	None:intergenic	65.0%
	TCAGGGAGGATGACGACGCC+GGG	+	chr1.1:45197231-45197250	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	45197081	45197947	45197081	ID=MS.gene72978
chr1.1	mRNA	45197081	45197947	45197081	ID=MS.gene72978.t1;Parent=MS.gene72978
chr1.1	exon	45197081	45197947	45197081	ID=MS.gene72978.t1.exon1;Parent=MS.gene72978.t1
chr1.1	CDS	45197081	45197947	45197081	ID=cds.MS.gene72978.t1;Parent=MS.gene72978.t1

Gene Sequence

>MS.gene72978

ATGTTTTCACAAAATATGTTCTTTGCAAAACCCTCCACTTCATCAATCTCAATCCGACCGGTGTGGTCATTCAATCTCGAATCAGAGTTCAAACTCATCCGGTCATTCGTGGATTCACATCCGATCATTTCAATGGACACCGAGTTTCCCGGCGTCGTCATCCTCCCTGACGGCATCACTGACTTATCATCTTACCATCGAACCCCTGCTGCCCACTACTCTGTCCTCAGGGCGAATGTTGATAATCTTAATATCATCCAAGTCGGTCTGACTTTATCTGATGTTGATGGTAATCTTCCGAAATTGAGAAATGGAAACTCTGAGGAGTCTCTGATTTGGGAATTCAATTTCAGTGATTTTGACTTCGAGCGTGATATTCACGCGCACGAGTCTATTGAATTGCTGAAGAGTCAGGGGATTGATTTTGAGAAAAACAAGGAATTTGGGATTGACTCTAGGAGATTTGCTGAATTGATGATGAGTTCCGGACTTGTGTGTAATGAGGAGGTTAGCTGGGTGACATTTCATAGCGGTTATGATTTCGGATATTTGGTGAAGGCGTTGACTCAATATGCTTTGCCTGAAGAGCTTGCTGAGTTTCTGGTGCTGGTTAGGGTTTTCTTTGGGGAGAGTGTTTATGATGTGAAGCATTTGGCAAAGTTTTGTGAGGGGTTGTATGGTGGTTTGGATAGGGTTGGGAAGATGCTGAATGTGGATCGGGTTGTTGGGAAGACTCATGAGGCGGGTTCTGATAGTTTGCTGACTCTTCATGCTTTTAGGAAGATCAAGGAAGTTTACTTTGGGAATGATGATGGTCAACTGATGAAGTATGCTGGTGTGTTGTATGGATTAGAAAATGTGGTTTGA

Protein sequence

>MS.gene72978.t1

MFSQNMFFAKPSTSSISIRPVWSFNLESEFKLIRSFVDSHPIISMDTEFPGVVILPDGITDLSSYHRTPAAHYSVLRANVDNLNIIQVGLTLSDVDGNLPKLRNGNSEESLIWEFNFSDFDFERDIHAHESIELLKSQGIDFEKNKEFGIDSRRFAELMMSSGLVCNEEVSWVTFHSGYDFGYLVKALTQYALPEELAEFLVLVRVFFGESVYDVKHLAKFCEGLYGGLDRVGKMLNVDRVVGKTHEAGSDSLLTLHAFRKIKEVYFGNDDGQLMKYAGVLYGLENVV