Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065707.t1 | XP_024633362.1 | 98.3 | 288 | 5 | 0 | 1 | 288 | 1 | 288 | 1.40E-160 | 575.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065707.t1 | Q9FMS6 | 62.1 | 272 | 94 | 5 | 16 | 285 | 12 | 276 | 7.2e-89 | 328.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065707.t1 | A0A396JQM4 | 76.5 | 332 | 34 | 1 | 1 | 288 | 1 | 332 | 2.9e-139 | 504.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065707.t1 | AT5G22250 | 62.132 | 272 | 94 | 5 | 16 | 285 | 12 | 276 | 2.78e-114 | 330 |
MS.gene065707.t1 | AT3G44260 | 60.289 | 277 | 100 | 4 | 10 | 285 | 11 | 278 | 3.20e-112 | 325 |
MS.gene065707.t1 | AT2G32070 | 54.815 | 270 | 110 | 5 | 15 | 284 | 9 | 266 | 1.77e-97 | 288 |
MS.gene065707.t1 | AT5G10960 | 54.074 | 270 | 111 | 5 | 15 | 284 | 9 | 265 | 4.62e-94 | 279 |
MS.gene065707.t1 | AT1G80780 | 53.333 | 270 | 113 | 5 | 15 | 284 | 9 | 265 | 8.20e-93 | 276 |
MS.gene065707.t1 | AT1G80780 | 53.333 | 270 | 113 | 5 | 15 | 284 | 9 | 265 | 8.20e-93 | 276 |
MS.gene065707.t1 | AT1G80780 | 53.333 | 270 | 113 | 5 | 15 | 284 | 9 | 265 | 1.00e-92 | 276 |
MS.gene065707.t1 | AT1G15920 | 47.985 | 273 | 133 | 5 | 15 | 286 | 13 | 277 | 1.11e-84 | 256 |
MS.gene065707.t1 | AT1G15920 | 47.985 | 273 | 133 | 5 | 15 | 286 | 13 | 277 | 1.11e-84 | 256 |
MS.gene065707.t1 | AT1G06450 | 34.686 | 271 | 146 | 9 | 19 | 284 | 10 | 254 | 1.68e-40 | 144 |
MS.gene065707.t1 | AT1G61470 | 37.652 | 247 | 126 | 8 | 21 | 262 | 5 | 228 | 6.51e-39 | 138 |
MS.gene065707.t1 | AT1G27820 | 37.500 | 256 | 130 | 10 | 14 | 262 | 2 | 234 | 1.07e-36 | 133 |
MS.gene065707.t1 | AT1G27890 | 36.948 | 249 | 127 | 9 | 21 | 262 | 4 | 229 | 3.23e-33 | 124 |
MS.gene065707.t1 | AT3G44240 | 35.622 | 233 | 128 | 7 | 32 | 262 | 3 | 215 | 1.74e-31 | 117 |
Find 78 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAGAGCTTGCTGAGTTTC+TGG | 0.137768 | 1.2:-45649338 | MS.gene065707:CDS |
CGGTTATGATTTCGGATATT+TGG | 0.177802 | 1.2:-45649389 | MS.gene065707:CDS |
CTGAGTTTCTGGTGCTGGTT+AGG | 0.266063 | 1.2:-45649327 | MS.gene065707:CDS |
GAGTTTCCATTTCTCAATTT+CGG | 0.277287 | 1.2:+45649622 | None:intergenic |
TTTCATAGCGGTTATGATTT+CGG | 0.281368 | 1.2:-45649397 | MS.gene065707:CDS |
TGAGGGGTTGTATGGTGGTT+TGG | 0.315361 | 1.2:-45649254 | MS.gene065707:CDS |
CTCTGAGGAGTCTCTGATTT+GGG | 0.348899 | 1.2:-45649602 | MS.gene065707:CDS |
GGTTGTATGGTGGTTTGGAT+AGG | 0.356604 | 1.2:-45649249 | MS.gene065707:CDS |
ACTCTGAGGAGTCTCTGATT+TGG | 0.379462 | 1.2:-45649603 | MS.gene065707:CDS |
AGGACAGAGTAGTGGGCAGC+AGG | 0.380556 | 1.2:+45649715 | None:intergenic |
TATTGAATTGCTGAAGAGTC+AGG | 0.387147 | 1.2:-45649527 | MS.gene065707:CDS |
AGAAACTCAGCAAGCTCTTC+AGG | 0.387400 | 1.2:+45649340 | None:intergenic |
AAGATCAAGGAAGTTTACTT+TGG | 0.387834 | 1.2:-45649139 | MS.gene065707:CDS |
AGATCAAGGAAGTTTACTTT+GGG | 0.402765 | 1.2:-45649138 | MS.gene065707:CDS |
GTTGTATGGTGGTTTGGATA+GGG | 0.410931 | 1.2:-45649248 | MS.gene065707:CDS |
TCAATGGACACCGAGTTTCC+CGG | 0.417725 | 1.2:-45649790 | MS.gene065707:CDS |
AGTAGTGGGCAGCAGGGGTT+CGG | 0.425607 | 1.2:+45649722 | None:intergenic |
CTGCCCACTACTCTGTCCTC+AGG | 0.430977 | 1.2:-45649711 | MS.gene065707:CDS |
GCTTGCTGAGTTTCTGGTGC+TGG | 0.435084 | 1.2:-45649332 | MS.gene065707:CDS |
GTTTACTTTGGGAATGATGA+TGG | 0.437530 | 1.2:-45649127 | MS.gene065707:CDS |
GATAAGTCAGTGATGCCGTC+AGG | 0.438524 | 1.2:+45649754 | None:intergenic |
GCTGAATTGATGATGAGTTC+CGG | 0.441489 | 1.2:-45649454 | MS.gene065707:CDS |
TATGGTGGTTTGGATAGGGT+TGG | 0.443187 | 1.2:-45649244 | MS.gene065707:CDS |
TGAGTTTCTGGTGCTGGTTA+GGG | 0.447849 | 1.2:-45649326 | MS.gene065707:CDS |
AAGTATGCTGGTGTGTTGTA+TGG | 0.453388 | 1.2:-45649094 | MS.gene065707:CDS |
CTGAATGTGGATCGGGTTGT+TGG | 0.455074 | 1.2:-45649214 | MS.gene065707:CDS |
TGTGTAATGAGGAGGTTAGC+TGG | 0.455691 | 1.2:-45649426 | MS.gene065707:CDS |
AATCTTCCGAAATTGAGAAA+TGG | 0.456621 | 1.2:-45649628 | MS.gene065707:CDS |
CTGACTTTATCTGATGTTGA+TGG | 0.457863 | 1.2:-45649652 | MS.gene065707:CDS |
TTCACATCCGATCATTTCAA+TGG | 0.460225 | 1.2:-45649806 | MS.gene065707:CDS |
ATGGTGGTTTGGATAGGGTT+GGG | 0.461650 | 1.2:-45649243 | MS.gene065707:CDS |
TGTTTATGATGTGAAGCATT+TGG | 0.467019 | 1.2:-45649287 | MS.gene065707:CDS |
GATGTGAATCCACGAATGAC+CGG | 0.499249 | 1.2:+45649821 | None:intergenic |
CATCAATTCAGCAAATCTCC+TGG | 0.513271 | 1.2:+45649465 | None:intergenic |
GACAGAGTAGTGGGCAGCAG+GGG | 0.527192 | 1.2:+45649717 | None:intergenic |
CTCCTCATTACACACAAGTC+CGG | 0.531799 | 1.2:+45649435 | None:intergenic |
TGAATGTGGATCGGGTTGTT+GGG | 0.532840 | 1.2:-45649213 | MS.gene065707:CDS |
CAGATAAAGTCAGACCGACT+TGG | 0.536256 | 1.2:+45649662 | None:intergenic |
GATGATGACGCCGGGAAACT+CGG | 0.538800 | 1.2:+45649780 | None:intergenic |
CGCCCTGAGGACAGAGTAGT+GGG | 0.539360 | 1.2:+45649708 | None:intergenic |
CAAACTCATCCGGTCATTCG+TGG | 0.539913 | 1.2:-45649830 | MS.gene065707:CDS |
GGACAGAGTAGTGGGCAGCA+GGG | 0.541030 | 1.2:+45649716 | None:intergenic |
AGTCAGAGTTCAAACTCATC+CGG | 0.541607 | 1.2:-45649840 | MS.gene065707:CDS |
TCGGATTGAGATTGATGAAG+TGG | 0.551337 | 1.2:+45649885 | None:intergenic |
AGGACTTTGGGATTGACTCC+AGG | 0.551888 | 1.2:-45649483 | MS.gene065707:CDS |
GTGTAATGAGGAGGTTAGCT+GGG | 0.552375 | 1.2:-45649425 | MS.gene065707:CDS |
TCAGGGAGGATGATGACGCC+GGG | 0.555163 | 1.2:+45649772 | None:intergenic |
GAAGATGCTGAATGTGGATC+GGG | 0.556799 | 1.2:-45649221 | MS.gene065707:CDS |
AGTGGGCAGCAGGGGTTCGG+TGG | 0.563933 | 1.2:+45649725 | None:intergenic |
GTTGGGAAGACTCATGAGGC+GGG | 0.571775 | 1.2:-45649196 | MS.gene065707:CDS |
GTTGTATGGATTAGAAAATG+TGG | 0.574852 | 1.2:-45649080 | MS.gene065707:CDS |
TTCATCAATCTCAATCCGAC+CGG | 0.575331 | 1.2:-45649881 | MS.gene065707:CDS |
ATTGAGATTGATGAAGTGGA+GGG | 0.577397 | 1.2:+45649889 | None:intergenic |
TGATTTCGGATATTTGGTGA+AGG | 0.579004 | 1.2:-45649383 | MS.gene065707:CDS |
GTCAGGGAGGATGATGACGC+CGG | 0.580951 | 1.2:+45649771 | None:intergenic |
TGCCCACTACTCTGTCCTCA+GGG | 0.581136 | 1.2:-45649710 | MS.gene065707:CDS |
GATTGAGATTGATGAAGTGG+AGG | 0.581983 | 1.2:+45649888 | None:intergenic |
ATTGAATTGCTGAAGAGTCA+GGG | 0.584201 | 1.2:-45649526 | MS.gene065707:CDS |
GGAAGATGCTGAATGTGGAT+CGG | 0.586905 | 1.2:-45649222 | MS.gene065707:CDS |
GGCGTCATCATCCTCCCTGA+CGG | 0.594930 | 1.2:-45649769 | MS.gene065707:CDS |
TCGCCCTGAGGACAGAGTAG+TGG | 0.599581 | 1.2:+45649707 | None:intergenic |
TGTTGGGAAGACTCATGAGG+CGG | 0.605761 | 1.2:-45649197 | MS.gene065707:CDS |
CGGACTTGTGTGTAATGAGG+AGG | 0.606992 | 1.2:-45649434 | MS.gene065707:CDS |
GATTGAATGACCACACCGGT+CGG | 0.621202 | 1.2:+45649866 | None:intergenic |
ATAAGTCAGTGATGCCGTCA+GGG | 0.629101 | 1.2:+45649755 | None:intergenic |
TTGAATTGCTGAAGAGTCAG+GGG | 0.629903 | 1.2:-45649525 | MS.gene065707:CDS |
AATCTTAATATCATCCAAGT+CGG | 0.632534 | 1.2:-45649676 | MS.gene065707:CDS |
TTCCGGACTTGTGTGTAATG+AGG | 0.640291 | 1.2:-45649437 | MS.gene065707:CDS |
GGTCAACTGATGAAGTATGC+TGG | 0.641076 | 1.2:-45649106 | MS.gene065707:CDS |
TCGGTGTCCATTGAAATGAT+CGG | 0.650692 | 1.2:+45649799 | None:intergenic |
GGTTGGGAAGATGCTGAATG+TGG | 0.657129 | 1.2:-45649227 | MS.gene065707:CDS |
ATTGAGAAATGGAAACTCTG+AGG | 0.667083 | 1.2:-45649617 | MS.gene065707:CDS |
GATTATCAACATTCGCCCTG+AGG | 0.675401 | 1.2:+45649695 | None:intergenic |
CAATCTCAATCCGACCGGTG+TGG | 0.685580 | 1.2:-45649876 | MS.gene065707:CDS |
GGTTGTTGGGAAGACTCATG+AGG | 0.692805 | 1.2:-45649200 | MS.gene065707:CDS |
AGTCAGTGATGCCGTCAGGG+AGG | 0.718902 | 1.2:+45649758 | None:intergenic |
AGCTGGGTGACATTTCATAG+CGG | 0.736884 | 1.2:-45649409 | MS.gene065707:CDS |
TCGAGATTGAATGACCACAC+CGG | 0.757455 | 1.2:+45649862 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AATCTTAATATCATCCAAGT+CGG | - | chr1.2:45649318-45649337 | MS.gene065707:CDS | 25.0% |
!!! | GATTGATTTTGAGAAAAACA+AGG | - | chr1.2:45649491-45649510 | MS.gene065707:CDS | 25.0% |
AAGATCAAGGAAGTTTACTT+TGG | - | chr1.2:45649855-45649874 | MS.gene065707:CDS | 30.0% | |
AATCTTCCGAAATTGAGAAA+TGG | - | chr1.2:45649366-45649385 | MS.gene065707:CDS | 30.0% | |
AGATCAAGGAAGTTTACTTT+GGG | - | chr1.2:45649856-45649875 | MS.gene065707:CDS | 30.0% | |
GAGTTTCCATTTCTCAATTT+CGG | + | chr1.2:45649375-45649394 | None:intergenic | 30.0% | |
TTGAGAAAAACAAGGACTTT+GGG | - | chr1.2:45649499-45649518 | MS.gene065707:CDS | 30.0% | |
TTTCATAGCGGTTATGATTT+CGG | - | chr1.2:45649597-45649616 | MS.gene065707:CDS | 30.0% | |
TTTGAGAAAAACAAGGACTT+TGG | - | chr1.2:45649498-45649517 | MS.gene065707:CDS | 30.0% | |
! | TGTTTATGATGTGAAGCATT+TGG | - | chr1.2:45649707-45649726 | MS.gene065707:CDS | 30.0% |
!! | GTTGTATGGATTAGAAAATG+TGG | - | chr1.2:45649914-45649933 | MS.gene065707:CDS | 30.0% |
ATTGAATTGCTGAAGAGTCA+GGG | - | chr1.2:45649468-45649487 | MS.gene065707:CDS | 35.0% | |
ATTGAGAAATGGAAACTCTG+AGG | - | chr1.2:45649377-45649396 | MS.gene065707:CDS | 35.0% | |
ATTGAGATTGATGAAGTGGA+GGG | + | chr1.2:45649108-45649127 | None:intergenic | 35.0% | |
CGGTTATGATTTCGGATATT+TGG | - | chr1.2:45649605-45649624 | MS.gene065707:CDS | 35.0% | |
CTGACTTTATCTGATGTTGA+TGG | - | chr1.2:45649342-45649361 | MS.gene065707:CDS | 35.0% | |
TATTGAATTGCTGAAGAGTC+AGG | - | chr1.2:45649467-45649486 | MS.gene065707:CDS | 35.0% | |
TTCACATCCGATCATTTCAA+TGG | - | chr1.2:45649188-45649207 | MS.gene065707:CDS | 35.0% | |
! | GTTTACTTTGGGAATGATGA+TGG | - | chr1.2:45649867-45649886 | MS.gene065707:CDS | 35.0% |
! | TGATTTCGGATATTTGGTGA+AGG | - | chr1.2:45649611-45649630 | MS.gene065707:CDS | 35.0% |
!! | ATTTGGCAAAGTTTTGTGAG+GGG | - | chr1.2:45649724-45649743 | MS.gene065707:CDS | 35.0% |
!! | CATTTGGCAAAGTTTTGTGA+GGG | - | chr1.2:45649723-45649742 | MS.gene065707:CDS | 35.0% |
!! | TCATGCTTTTAGGAAGATCA+AGG | - | chr1.2:45649842-45649861 | MS.gene065707:CDS | 35.0% |
AAGTATGCTGGTGTGTTGTA+TGG | - | chr1.2:45649900-45649919 | MS.gene065707:CDS | 40.0% | |
AGTCAGAGTTCAAACTCATC+CGG | - | chr1.2:45649154-45649173 | MS.gene065707:CDS | 40.0% | |
CATCAATTCAGCAAATCTCC+TGG | + | chr1.2:45649532-45649551 | None:intergenic | 40.0% | |
GATTGAGATTGATGAAGTGG+AGG | + | chr1.2:45649109-45649128 | None:intergenic | 40.0% | |
TCGGATTGAGATTGATGAAG+TGG | + | chr1.2:45649112-45649131 | None:intergenic | 40.0% | |
TTCATCAATCTCAATCCGAC+CGG | - | chr1.2:45649113-45649132 | MS.gene065707:CDS | 40.0% | |
TTGAATTGCTGAAGAGTCAG+GGG | - | chr1.2:45649469-45649488 | MS.gene065707:CDS | 40.0% | |
! | GTTGTATGGTGGTTTGGATA+GGG | - | chr1.2:45649746-45649765 | MS.gene065707:CDS | 40.0% |
! | TCGGTGTCCATTGAAATGAT+CGG | + | chr1.2:45649198-45649217 | None:intergenic | 40.0% |
!! | AAGTTTTGTGAGGGGTTGTA+TGG | - | chr1.2:45649732-45649751 | MS.gene065707:CDS | 40.0% |
!! | GCATTTGGCAAAGTTTTGTG+AGG | - | chr1.2:45649722-45649741 | MS.gene065707:CDS | 40.0% |
!! | GCTGAATTGATGATGAGTTC+CGG | - | chr1.2:45649540-45649559 | MS.gene065707:CDS | 40.0% |
!! | TGCTGGTTAGGGTTTTCTTT+GGG | - | chr1.2:45649679-45649698 | MS.gene065707:CDS | 40.0% |
!!! | TGCTGACTCTTCATGCTTTT+AGG | - | chr1.2:45649832-45649851 | MS.gene065707:CDS | 40.0% |
AGAAACTCAGCAAGCTCTTC+AGG | + | chr1.2:45649657-45649676 | None:intergenic | 45.0% | |
AGCTGGGTGACATTTCATAG+CGG | - | chr1.2:45649585-45649604 | MS.gene065707:CDS | 45.0% | |
ATAAGTCAGTGATGCCGTCA+GGG | + | chr1.2:45649242-45649261 | None:intergenic | 45.0% | |
CAGATAAAGTCAGACCGACT+TGG | + | chr1.2:45649335-45649354 | None:intergenic | 45.0% | |
CTCCTCATTACACACAAGTC+CGG | + | chr1.2:45649562-45649581 | None:intergenic | 45.0% | |
GAAGATGCTGAATGTGGATC+GGG | - | chr1.2:45649773-45649792 | MS.gene065707:CDS | 45.0% | |
GATGTGAATCCACGAATGAC+CGG | + | chr1.2:45649176-45649195 | None:intergenic | 45.0% | |
GATTATCAACATTCGCCCTG+AGG | + | chr1.2:45649302-45649321 | None:intergenic | 45.0% | |
GGAAGATGCTGAATGTGGAT+CGG | - | chr1.2:45649772-45649791 | MS.gene065707:CDS | 45.0% | |
GGTCAACTGATGAAGTATGC+TGG | - | chr1.2:45649888-45649907 | MS.gene065707:CDS | 45.0% | |
TCGAGATTGAATGACCACAC+CGG | + | chr1.2:45649135-45649154 | None:intergenic | 45.0% | |
TGTGTAATGAGGAGGTTAGC+TGG | - | chr1.2:45649568-45649587 | MS.gene065707:CDS | 45.0% | |
TTCCGGACTTGTGTGTAATG+AGG | - | chr1.2:45649557-45649576 | MS.gene065707:CDS | 45.0% | |
! | ACTCTGAGGAGTCTCTGATT+TGG | - | chr1.2:45649391-45649410 | MS.gene065707:CDS | 45.0% |
! | ATGGTGGTTTGGATAGGGTT+GGG | - | chr1.2:45649751-45649770 | MS.gene065707:CDS | 45.0% |
! | CTCTGAGGAGTCTCTGATTT+GGG | - | chr1.2:45649392-45649411 | MS.gene065707:CDS | 45.0% |
! | GCTGGTTAGGGTTTTCTTTG+GGG | - | chr1.2:45649680-45649699 | MS.gene065707:CDS | 45.0% |
! | GGTTGTATGGTGGTTTGGAT+AGG | - | chr1.2:45649745-45649764 | MS.gene065707:CDS | 45.0% |
! | GTGTAATGAGGAGGTTAGCT+GGG | - | chr1.2:45649569-45649588 | MS.gene065707:CDS | 45.0% |
! | TATGGTGGTTTGGATAGGGT+TGG | - | chr1.2:45649750-45649769 | MS.gene065707:CDS | 45.0% |
! | TGAATGTGGATCGGGTTGTT+GGG | - | chr1.2:45649781-45649800 | MS.gene065707:CDS | 45.0% |
! | TTTTGTGAGGGGTTGTATGG+TGG | - | chr1.2:45649735-45649754 | MS.gene065707:CDS | 45.0% |
!! | TGAAGAGCTTGCTGAGTTTC+TGG | - | chr1.2:45649656-45649675 | MS.gene065707:CDS | 45.0% |
!! | TGAGTTTCTGGTGCTGGTTA+GGG | - | chr1.2:45649668-45649687 | MS.gene065707:CDS | 45.0% |
!!! | GTGCTGGTTAGGGTTTTCTT+TGG | - | chr1.2:45649678-45649697 | MS.gene065707:CDS | 45.0% |
CAAACTCATCCGGTCATTCG+TGG | - | chr1.2:45649164-45649183 | MS.gene065707:CDS | 50.0% | |
CGGACTTGTGTGTAATGAGG+AGG | - | chr1.2:45649560-45649579 | MS.gene065707:CDS | 50.0% | |
GATAAGTCAGTGATGCCGTC+AGG | + | chr1.2:45649243-45649262 | None:intergenic | 50.0% | |
GATTGAATGACCACACCGGT+CGG | + | chr1.2:45649131-45649150 | None:intergenic | 50.0% | |
GGTTGGGAAGATGCTGAATG+TGG | - | chr1.2:45649767-45649786 | MS.gene065707:CDS | 50.0% | |
GGTTGTTGGGAAGACTCATG+AGG | - | chr1.2:45649794-45649813 | MS.gene065707:CDS | 50.0% | |
TCAATGGACACCGAGTTTCC+CGG | - | chr1.2:45649204-45649223 | MS.gene065707:CDS | 50.0% | |
TGAGGGGTTGTATGGTGGTT+TGG | - | chr1.2:45649740-45649759 | MS.gene065707:CDS | 50.0% | |
TGTTGGGAAGACTCATGAGG+CGG | - | chr1.2:45649797-45649816 | MS.gene065707:CDS | 50.0% | |
! | CTGAATGTGGATCGGGTTGT+TGG | - | chr1.2:45649780-45649799 | MS.gene065707:CDS | 50.0% |
!! | AGGACTTTGGGATTGACTCC+AGG | - | chr1.2:45649511-45649530 | MS.gene065707:CDS | 50.0% |
!! | CTGAGTTTCTGGTGCTGGTT+AGG | - | chr1.2:45649667-45649686 | MS.gene065707:CDS | 50.0% |
CAATCTCAATCCGACCGGTG+TGG | - | chr1.2:45649118-45649137 | MS.gene065707:CDS | 55.0% | |
GTTGGGAAGACTCATGAGGC+GGG | - | chr1.2:45649798-45649817 | MS.gene065707:CDS | 55.0% | |
TGCCCACTACTCTGTCCTCA+GGG | - | chr1.2:45649284-45649303 | MS.gene065707:CDS | 55.0% | |
! | GATGATGACGCCGGGAAACT+CGG | + | chr1.2:45649217-45649236 | None:intergenic | 55.0% |
!! | GCTTGCTGAGTTTCTGGTGC+TGG | - | chr1.2:45649662-45649681 | MS.gene065707:CDS | 55.0% |
AGTCAGTGATGCCGTCAGGG+AGG | + | chr1.2:45649239-45649258 | None:intergenic | 60.0% | |
CGCCCTGAGGACAGAGTAGT+GGG | + | chr1.2:45649289-45649308 | None:intergenic | 60.0% | |
CTGCCCACTACTCTGTCCTC+AGG | - | chr1.2:45649283-45649302 | MS.gene065707:CDS | 60.0% | |
GGCGTCATCATCCTCCCTGA+CGG | - | chr1.2:45649225-45649244 | MS.gene065707:CDS | 60.0% | |
TCGCCCTGAGGACAGAGTAG+TGG | + | chr1.2:45649290-45649309 | None:intergenic | 60.0% | |
! | GTCAGGGAGGATGATGACGC+CGG | + | chr1.2:45649226-45649245 | None:intergenic | 60.0% |
! | TCAGGGAGGATGATGACGCC+GGG | + | chr1.2:45649225-45649244 | None:intergenic | 60.0% |
!! | AGGACAGAGTAGTGGGCAGC+AGG | + | chr1.2:45649282-45649301 | None:intergenic | 60.0% |
!! | AGTAGTGGGCAGCAGGGGTT+CGG | + | chr1.2:45649275-45649294 | None:intergenic | 60.0% |
!! | GACAGAGTAGTGGGCAGCAG+GGG | + | chr1.2:45649280-45649299 | None:intergenic | 60.0% |
!! | GGACAGAGTAGTGGGCAGCA+GGG | + | chr1.2:45649281-45649300 | None:intergenic | 60.0% |
AGTGGGCAGCAGGGGTTCGG+TGG | + | chr1.2:45649272-45649291 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 45649075 | 45649941 | 45649075 | ID=MS.gene065707 |
chr1.2 | mRNA | 45649075 | 45649941 | 45649075 | ID=MS.gene065707.t1;Parent=MS.gene065707 |
chr1.2 | exon | 45649075 | 45649941 | 45649075 | ID=MS.gene065707.t1.exon1;Parent=MS.gene065707.t1 |
chr1.2 | CDS | 45649075 | 45649941 | 45649075 | ID=cds.MS.gene065707.t1;Parent=MS.gene065707.t1 |
Gene Sequence |
Protein sequence |