AlfalfaGEDB | MS.gene41100

M. sativa cultivar XinJiangDaYe / MS.gene41100

KEGG: K12581
GO: GO:0003674 GO:0003676 GO:0005488 GO:0097159 GO:1901363
PFAM: PF04857.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41100.t1	XP_024633362.1	98.3	288	5	0	1	288	1	288	1.40E-160	575.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41100.t1	Q9FMS6	62.1	272	94	5	16	285	12	276	7.2e-89	328.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41100.t1	A0A396JQM4	76.5	332	34	1	1	288	1	332	2.9e-139	504.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene35444	MS.gene41100	PPI
MS.gene41100	MS.gene53123	PPI
MS.gene41100	MS.gene78556	PPI
MS.gene41100	MS.gene85903	PPI
MS.gene41100	MS.gene048793	PPI
MS.gene41100	MS.gene048794	PPI
MS.gene41100	MS.gene014264	PPI
MS.gene41100	MS.gene35692	PPI
MS.gene81219	MS.gene41100	PPI
MS.gene41100	MS.gene35431	PPI
MS.gene41100	MS.gene53122	PPI
MS.gene053225	MS.gene41100	PPI
MS.gene034250	MS.gene41100	PPI
MS.gene53120	MS.gene41100	PPI
MS.gene72178	MS.gene41100	PPI
MS.gene68798	MS.gene41100	PPI
MS.gene41100	MS.gene72156	PPI
MS.gene41100	MS.gene85904	PPI
MS.gene41100	MS.gene030414	PPI
MS.gene41100	MS.gene034438	PPI
MS.gene41100	MS.gene85905	PPI
MS.gene41100	MS.gene53119	PPI
MS.gene41100	MS.gene000609	PPI
MS.gene53121	MS.gene41100	PPI
MS.gene41100	MS.gene55324	PPI
MS.gene41100	MS.gene020895	PPI
MS.gene41100	MS.gene72157	PPI
MS.gene030415	MS.gene41100	PPI
MS.gene68205	MS.gene41100	PPI
MS.gene78557	MS.gene41100	PPI
MS.gene72160	MS.gene41100	PPI
MS.gene41100	MS.gene85901	PPI
MS.gene38201	MS.gene41100	PPI
MS.gene41100	MS.gene38057	PPI
MS.gene41100	MS.gene84309	PPI
MS.gene070320	MS.gene41100	PPI
MS.gene41100	MS.gene38199	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41100.t1	AT5G22250	62.132	272	94	5	16	285	12	276	2.78e-114	330
MS.gene41100.t1	AT3G44260	60.289	277	100	4	10	285	11	278	3.20e-112	325
MS.gene41100.t1	AT2G32070	54.815	270	110	5	15	284	9	266	1.77e-97	288
MS.gene41100.t1	AT5G10960	54.074	270	111	5	15	284	9	265	4.62e-94	279
MS.gene41100.t1	AT1G80780	53.333	270	113	5	15	284	9	265	8.20e-93	276
MS.gene41100.t1	AT1G80780	53.333	270	113	5	15	284	9	265	8.20e-93	276
MS.gene41100.t1	AT1G80780	53.333	270	113	5	15	284	9	265	1.00e-92	276
MS.gene41100.t1	AT1G15920	47.985	273	133	5	15	286	13	277	1.11e-84	256
MS.gene41100.t1	AT1G15920	47.985	273	133	5	15	286	13	277	1.11e-84	256
MS.gene41100.t1	AT1G06450	34.686	271	146	9	19	284	10	254	1.68e-40	144
MS.gene41100.t1	AT1G61470	37.652	247	126	8	21	262	5	228	6.51e-39	138
MS.gene41100.t1	AT1G27820	37.500	256	130	10	14	262	2	234	1.07e-36	133
MS.gene41100.t1	AT1G27890	36.948	249	127	9	21	262	4	229	3.23e-33	124
MS.gene41100.t1	AT3G44240	35.622	233	128	7	32	262	3	215	1.74e-31	117

Find 78 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAAGAGCTTGCTGAGTTTC+TGG	0.137768	1.3:-42639580	MS.gene41100:CDS
CGGTTATGATTTCGGATATT+TGG	0.177802	1.3:-42639631	MS.gene41100:CDS
CTGAGTTTCTGGTGCTGGTT+AGG	0.266063	1.3:-42639569	MS.gene41100:CDS
GAGTTTCCATTTCTCAATTT+CGG	0.277287	1.3:+42639864	None:intergenic
TTTCATAGCGGTTATGATTT+CGG	0.281368	1.3:-42639639	MS.gene41100:CDS
TGAGGGGTTGTATGGTGGTT+TGG	0.315361	1.3:-42639496	MS.gene41100:CDS
CTCTGAGGAGTCTCTGATTT+GGG	0.348899	1.3:-42639844	MS.gene41100:CDS
GGTTGTATGGTGGTTTGGAT+AGG	0.356604	1.3:-42639491	MS.gene41100:CDS
ACTCTGAGGAGTCTCTGATT+TGG	0.379462	1.3:-42639845	MS.gene41100:CDS
AGGACAGAGTAGTGGGCAGC+AGG	0.380556	1.3:+42639957	None:intergenic
TATTGAATTGCTGAAGAGTC+AGG	0.387147	1.3:-42639769	MS.gene41100:CDS
AGAAACTCAGCAAGCTCTTC+AGG	0.387400	1.3:+42639582	None:intergenic
AAGATCAAGGAAGTTTACTT+TGG	0.387834	1.3:-42639381	MS.gene41100:CDS
AGATCAAGGAAGTTTACTTT+GGG	0.402765	1.3:-42639380	MS.gene41100:CDS
GTTGTATGGTGGTTTGGATA+GGG	0.410931	1.3:-42639490	MS.gene41100:CDS
TCAATGGACACCGAGTTTCC+CGG	0.417725	1.3:-42640032	MS.gene41100:CDS
AGTAGTGGGCAGCAGGGGTT+CGG	0.425607	1.3:+42639964	None:intergenic
CTGCCCACTACTCTGTCCTC+AGG	0.430977	1.3:-42639953	MS.gene41100:CDS
GCTTGCTGAGTTTCTGGTGC+TGG	0.435084	1.3:-42639574	MS.gene41100:CDS
GTTTACTTTGGGAATGATGA+TGG	0.437530	1.3:-42639369	MS.gene41100:CDS
GATAAGTCAGTGATGCCGTC+AGG	0.438524	1.3:+42639996	None:intergenic
GCTGAATTGATGATGAGTTC+CGG	0.441489	1.3:-42639696	MS.gene41100:CDS
TATGGTGGTTTGGATAGGGT+TGG	0.443187	1.3:-42639486	MS.gene41100:CDS
TGAGTTTCTGGTGCTGGTTA+GGG	0.447849	1.3:-42639568	MS.gene41100:CDS
AAGTATGCTGGTGTGTTGTA+TGG	0.453388	1.3:-42639336	MS.gene41100:CDS
CTGAATGTGGATCGGGTTGT+TGG	0.455074	1.3:-42639456	MS.gene41100:CDS
TGTGTAATGAGGAGGTTAGC+TGG	0.455691	1.3:-42639668	MS.gene41100:CDS
AATCTTCCGAAATTGAGAAA+TGG	0.456621	1.3:-42639870	MS.gene41100:CDS
CTGACTTTATCTGATGTTGA+TGG	0.457863	1.3:-42639894	MS.gene41100:CDS
TTCACATCCGATCATTTCAA+TGG	0.460225	1.3:-42640048	MS.gene41100:CDS
ATGGTGGTTTGGATAGGGTT+GGG	0.461650	1.3:-42639485	MS.gene41100:CDS
TGTTTATGATGTGAAGCATT+TGG	0.467019	1.3:-42639529	MS.gene41100:CDS
GATGTGAATCCACGAATGAC+CGG	0.499249	1.3:+42640063	None:intergenic
CATCAATTCAGCAAATCTCC+TGG	0.513271	1.3:+42639707	None:intergenic
GACAGAGTAGTGGGCAGCAG+GGG	0.527192	1.3:+42639959	None:intergenic
CTCCTCATTACACACAAGTC+CGG	0.531799	1.3:+42639677	None:intergenic
TGAATGTGGATCGGGTTGTT+GGG	0.532840	1.3:-42639455	MS.gene41100:CDS
CAGATAAAGTCAGACCGACT+TGG	0.536256	1.3:+42639904	None:intergenic
GATGATGACGCCGGGAAACT+CGG	0.538800	1.3:+42640022	None:intergenic
CGCCCTGAGGACAGAGTAGT+GGG	0.539360	1.3:+42639950	None:intergenic
CAAACTCATCCGGTCATTCG+TGG	0.539913	1.3:-42640072	MS.gene41100:CDS
GGACAGAGTAGTGGGCAGCA+GGG	0.541030	1.3:+42639958	None:intergenic
AGTCAGAGTTCAAACTCATC+CGG	0.541607	1.3:-42640082	MS.gene41100:CDS
TCGGATTGAGATTGATGAAG+TGG	0.551337	1.3:+42640127	None:intergenic
AGGACTTTGGGATTGACTCC+AGG	0.551888	1.3:-42639725	MS.gene41100:CDS
GTGTAATGAGGAGGTTAGCT+GGG	0.552375	1.3:-42639667	MS.gene41100:CDS
TCAGGGAGGATGATGACGCC+GGG	0.555163	1.3:+42640014	None:intergenic
GAAGATGCTGAATGTGGATC+GGG	0.556799	1.3:-42639463	MS.gene41100:CDS
AGTGGGCAGCAGGGGTTCGG+TGG	0.563933	1.3:+42639967	None:intergenic
GTTGGGAAGACTCATGAGGC+GGG	0.571775	1.3:-42639438	MS.gene41100:CDS
GTTGTATGGATTAGAAAATG+TGG	0.574852	1.3:-42639322	MS.gene41100:CDS
TTCATCAATCTCAATCCGAC+CGG	0.575331	1.3:-42640123	MS.gene41100:CDS
ATTGAGATTGATGAAGTGGA+GGG	0.577397	1.3:+42640131	None:intergenic
TGATTTCGGATATTTGGTGA+AGG	0.579004	1.3:-42639625	MS.gene41100:CDS
GTCAGGGAGGATGATGACGC+CGG	0.580951	1.3:+42640013	None:intergenic
TGCCCACTACTCTGTCCTCA+GGG	0.581136	1.3:-42639952	MS.gene41100:CDS
GATTGAGATTGATGAAGTGG+AGG	0.581983	1.3:+42640130	None:intergenic
ATTGAATTGCTGAAGAGTCA+GGG	0.584201	1.3:-42639768	MS.gene41100:CDS
GGAAGATGCTGAATGTGGAT+CGG	0.586905	1.3:-42639464	MS.gene41100:CDS
GGCGTCATCATCCTCCCTGA+CGG	0.594930	1.3:-42640011	MS.gene41100:CDS
TCGCCCTGAGGACAGAGTAG+TGG	0.599581	1.3:+42639949	None:intergenic
TGTTGGGAAGACTCATGAGG+CGG	0.605761	1.3:-42639439	MS.gene41100:CDS
CGGACTTGTGTGTAATGAGG+AGG	0.606992	1.3:-42639676	MS.gene41100:CDS
GATTGAATGACCACACCGGT+CGG	0.621202	1.3:+42640108	None:intergenic
ATAAGTCAGTGATGCCGTCA+GGG	0.629101	1.3:+42639997	None:intergenic
TTGAATTGCTGAAGAGTCAG+GGG	0.629903	1.3:-42639767	MS.gene41100:CDS
AATCTTAATATCATCCAAGT+CGG	0.632534	1.3:-42639918	MS.gene41100:CDS
TTCCGGACTTGTGTGTAATG+AGG	0.640291	1.3:-42639679	MS.gene41100:CDS
GGTCAACTGATGAAGTATGC+TGG	0.641076	1.3:-42639348	MS.gene41100:CDS
TCGGTGTCCATTGAAATGAT+CGG	0.650692	1.3:+42640041	None:intergenic
GGTTGGGAAGATGCTGAATG+TGG	0.657129	1.3:-42639469	MS.gene41100:CDS
ATTGAGAAATGGAAACTCTG+AGG	0.667083	1.3:-42639859	MS.gene41100:CDS
GATTATCAACATTCGCCCTG+AGG	0.675401	1.3:+42639937	None:intergenic
CAATCTCAATCCGACCGGTG+TGG	0.685580	1.3:-42640118	MS.gene41100:CDS
GGTTGTTGGGAAGACTCATG+AGG	0.692805	1.3:-42639442	MS.gene41100:CDS
AGTCAGTGATGCCGTCAGGG+AGG	0.718902	1.3:+42640000	None:intergenic
AGCTGGGTGACATTTCATAG+CGG	0.736884	1.3:-42639651	MS.gene41100:CDS
TCGAGATTGAATGACCACAC+CGG	0.757455	1.3:+42640104	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AATCTTAATATCATCCAAGT+CGG	-	chr1.3:42639560-42639579	MS.gene41100:CDS	25.0%
!!!	GATTGATTTTGAGAAAAACA+AGG	-	chr1.3:42639733-42639752	MS.gene41100:CDS	25.0%
	AAGATCAAGGAAGTTTACTT+TGG	-	chr1.3:42640097-42640116	MS.gene41100:CDS	30.0%
	AATCTTCCGAAATTGAGAAA+TGG	-	chr1.3:42639608-42639627	MS.gene41100:CDS	30.0%
	AGATCAAGGAAGTTTACTTT+GGG	-	chr1.3:42640098-42640117	MS.gene41100:CDS	30.0%
	GAGTTTCCATTTCTCAATTT+CGG	+	chr1.3:42639617-42639636	None:intergenic	30.0%
	TTGAGAAAAACAAGGACTTT+GGG	-	chr1.3:42639741-42639760	MS.gene41100:CDS	30.0%
	TTTCATAGCGGTTATGATTT+CGG	-	chr1.3:42639839-42639858	MS.gene41100:CDS	30.0%
	TTTGAGAAAAACAAGGACTT+TGG	-	chr1.3:42639740-42639759	MS.gene41100:CDS	30.0%
!	TGTTTATGATGTGAAGCATT+TGG	-	chr1.3:42639949-42639968	MS.gene41100:CDS	30.0%
!!	GTTGTATGGATTAGAAAATG+TGG	-	chr1.3:42640156-42640175	MS.gene41100:CDS	30.0%
	ATTGAATTGCTGAAGAGTCA+GGG	-	chr1.3:42639710-42639729	MS.gene41100:CDS	35.0%
	ATTGAGAAATGGAAACTCTG+AGG	-	chr1.3:42639619-42639638	MS.gene41100:CDS	35.0%
	ATTGAGATTGATGAAGTGGA+GGG	+	chr1.3:42639350-42639369	None:intergenic	35.0%
	CGGTTATGATTTCGGATATT+TGG	-	chr1.3:42639847-42639866	MS.gene41100:CDS	35.0%
	CTGACTTTATCTGATGTTGA+TGG	-	chr1.3:42639584-42639603	MS.gene41100:CDS	35.0%
	TATTGAATTGCTGAAGAGTC+AGG	-	chr1.3:42639709-42639728	MS.gene41100:CDS	35.0%
	TTCACATCCGATCATTTCAA+TGG	-	chr1.3:42639430-42639449	MS.gene41100:CDS	35.0%
!	GTTTACTTTGGGAATGATGA+TGG	-	chr1.3:42640109-42640128	MS.gene41100:CDS	35.0%
!	TGATTTCGGATATTTGGTGA+AGG	-	chr1.3:42639853-42639872	MS.gene41100:CDS	35.0%
!!	ATTTGGCAAAGTTTTGTGAG+GGG	-	chr1.3:42639966-42639985	MS.gene41100:CDS	35.0%
!!	CATTTGGCAAAGTTTTGTGA+GGG	-	chr1.3:42639965-42639984	MS.gene41100:CDS	35.0%
!!	TCATGCTTTTAGGAAGATCA+AGG	-	chr1.3:42640084-42640103	MS.gene41100:CDS	35.0%
	AAGTATGCTGGTGTGTTGTA+TGG	-	chr1.3:42640142-42640161	MS.gene41100:CDS	40.0%
	AGTCAGAGTTCAAACTCATC+CGG	-	chr1.3:42639396-42639415	MS.gene41100:CDS	40.0%
	CATCAATTCAGCAAATCTCC+TGG	+	chr1.3:42639774-42639793	None:intergenic	40.0%
	GATTGAGATTGATGAAGTGG+AGG	+	chr1.3:42639351-42639370	None:intergenic	40.0%
	TCGGATTGAGATTGATGAAG+TGG	+	chr1.3:42639354-42639373	None:intergenic	40.0%
	TTCATCAATCTCAATCCGAC+CGG	-	chr1.3:42639355-42639374	MS.gene41100:CDS	40.0%
	TTGAATTGCTGAAGAGTCAG+GGG	-	chr1.3:42639711-42639730	MS.gene41100:CDS	40.0%
!	GTTGTATGGTGGTTTGGATA+GGG	-	chr1.3:42639988-42640007	MS.gene41100:CDS	40.0%
!	TCGGTGTCCATTGAAATGAT+CGG	+	chr1.3:42639440-42639459	None:intergenic	40.0%
!!	AAGTTTTGTGAGGGGTTGTA+TGG	-	chr1.3:42639974-42639993	MS.gene41100:CDS	40.0%
!!	GCATTTGGCAAAGTTTTGTG+AGG	-	chr1.3:42639964-42639983	MS.gene41100:CDS	40.0%
!!	GCTGAATTGATGATGAGTTC+CGG	-	chr1.3:42639782-42639801	MS.gene41100:CDS	40.0%
!!	TGCTGGTTAGGGTTTTCTTT+GGG	-	chr1.3:42639921-42639940	MS.gene41100:CDS	40.0%
!!!	TGCTGACTCTTCATGCTTTT+AGG	-	chr1.3:42640074-42640093	MS.gene41100:CDS	40.0%
	AGAAACTCAGCAAGCTCTTC+AGG	+	chr1.3:42639899-42639918	None:intergenic	45.0%
	AGCTGGGTGACATTTCATAG+CGG	-	chr1.3:42639827-42639846	MS.gene41100:CDS	45.0%
	ATAAGTCAGTGATGCCGTCA+GGG	+	chr1.3:42639484-42639503	None:intergenic	45.0%
	CAGATAAAGTCAGACCGACT+TGG	+	chr1.3:42639577-42639596	None:intergenic	45.0%
	CTCCTCATTACACACAAGTC+CGG	+	chr1.3:42639804-42639823	None:intergenic	45.0%
	GAAGATGCTGAATGTGGATC+GGG	-	chr1.3:42640015-42640034	MS.gene41100:CDS	45.0%
	GATGTGAATCCACGAATGAC+CGG	+	chr1.3:42639418-42639437	None:intergenic	45.0%
	GATTATCAACATTCGCCCTG+AGG	+	chr1.3:42639544-42639563	None:intergenic	45.0%
	GGAAGATGCTGAATGTGGAT+CGG	-	chr1.3:42640014-42640033	MS.gene41100:CDS	45.0%
	GGTCAACTGATGAAGTATGC+TGG	-	chr1.3:42640130-42640149	MS.gene41100:CDS	45.0%
	TCGAGATTGAATGACCACAC+CGG	+	chr1.3:42639377-42639396	None:intergenic	45.0%
	TGTGTAATGAGGAGGTTAGC+TGG	-	chr1.3:42639810-42639829	MS.gene41100:CDS	45.0%
	TTCCGGACTTGTGTGTAATG+AGG	-	chr1.3:42639799-42639818	MS.gene41100:CDS	45.0%
!	ACTCTGAGGAGTCTCTGATT+TGG	-	chr1.3:42639633-42639652	MS.gene41100:CDS	45.0%
!	ATGGTGGTTTGGATAGGGTT+GGG	-	chr1.3:42639993-42640012	MS.gene41100:CDS	45.0%
!	CTCTGAGGAGTCTCTGATTT+GGG	-	chr1.3:42639634-42639653	MS.gene41100:CDS	45.0%
!	GCTGGTTAGGGTTTTCTTTG+GGG	-	chr1.3:42639922-42639941	MS.gene41100:CDS	45.0%
!	GGTTGTATGGTGGTTTGGAT+AGG	-	chr1.3:42639987-42640006	MS.gene41100:CDS	45.0%
!	GTGTAATGAGGAGGTTAGCT+GGG	-	chr1.3:42639811-42639830	MS.gene41100:CDS	45.0%
!	TATGGTGGTTTGGATAGGGT+TGG	-	chr1.3:42639992-42640011	MS.gene41100:CDS	45.0%
!	TGAATGTGGATCGGGTTGTT+GGG	-	chr1.3:42640023-42640042	MS.gene41100:CDS	45.0%
!	TTTTGTGAGGGGTTGTATGG+TGG	-	chr1.3:42639977-42639996	MS.gene41100:CDS	45.0%
!!	TGAAGAGCTTGCTGAGTTTC+TGG	-	chr1.3:42639898-42639917	MS.gene41100:CDS	45.0%
!!	TGAGTTTCTGGTGCTGGTTA+GGG	-	chr1.3:42639910-42639929	MS.gene41100:CDS	45.0%
!!!	GTGCTGGTTAGGGTTTTCTT+TGG	-	chr1.3:42639920-42639939	MS.gene41100:CDS	45.0%
	CAAACTCATCCGGTCATTCG+TGG	-	chr1.3:42639406-42639425	MS.gene41100:CDS	50.0%
	CGGACTTGTGTGTAATGAGG+AGG	-	chr1.3:42639802-42639821	MS.gene41100:CDS	50.0%
	GATAAGTCAGTGATGCCGTC+AGG	+	chr1.3:42639485-42639504	None:intergenic	50.0%
	GATTGAATGACCACACCGGT+CGG	+	chr1.3:42639373-42639392	None:intergenic	50.0%
	GGTTGGGAAGATGCTGAATG+TGG	-	chr1.3:42640009-42640028	MS.gene41100:CDS	50.0%
	GGTTGTTGGGAAGACTCATG+AGG	-	chr1.3:42640036-42640055	MS.gene41100:CDS	50.0%
	TCAATGGACACCGAGTTTCC+CGG	-	chr1.3:42639446-42639465	MS.gene41100:CDS	50.0%
	TGAGGGGTTGTATGGTGGTT+TGG	-	chr1.3:42639982-42640001	MS.gene41100:CDS	50.0%
	TGTTGGGAAGACTCATGAGG+CGG	-	chr1.3:42640039-42640058	MS.gene41100:CDS	50.0%
!	CTGAATGTGGATCGGGTTGT+TGG	-	chr1.3:42640022-42640041	MS.gene41100:CDS	50.0%
!!	AGGACTTTGGGATTGACTCC+AGG	-	chr1.3:42639753-42639772	MS.gene41100:CDS	50.0%
!!	CTGAGTTTCTGGTGCTGGTT+AGG	-	chr1.3:42639909-42639928	MS.gene41100:CDS	50.0%
	CAATCTCAATCCGACCGGTG+TGG	-	chr1.3:42639360-42639379	MS.gene41100:CDS	55.0%
	GTTGGGAAGACTCATGAGGC+GGG	-	chr1.3:42640040-42640059	MS.gene41100:CDS	55.0%
	TGCCCACTACTCTGTCCTCA+GGG	-	chr1.3:42639526-42639545	MS.gene41100:CDS	55.0%
!	GATGATGACGCCGGGAAACT+CGG	+	chr1.3:42639459-42639478	None:intergenic	55.0%
!!	GCTTGCTGAGTTTCTGGTGC+TGG	-	chr1.3:42639904-42639923	MS.gene41100:CDS	55.0%
	AGTCAGTGATGCCGTCAGGG+AGG	+	chr1.3:42639481-42639500	None:intergenic	60.0%
	CGCCCTGAGGACAGAGTAGT+GGG	+	chr1.3:42639531-42639550	None:intergenic	60.0%
	CTGCCCACTACTCTGTCCTC+AGG	-	chr1.3:42639525-42639544	MS.gene41100:CDS	60.0%
	GGCGTCATCATCCTCCCTGA+CGG	-	chr1.3:42639467-42639486	MS.gene41100:CDS	60.0%
	TCGCCCTGAGGACAGAGTAG+TGG	+	chr1.3:42639532-42639551	None:intergenic	60.0%
!	GTCAGGGAGGATGATGACGC+CGG	+	chr1.3:42639468-42639487	None:intergenic	60.0%
!	TCAGGGAGGATGATGACGCC+GGG	+	chr1.3:42639467-42639486	None:intergenic	60.0%
!!	AGGACAGAGTAGTGGGCAGC+AGG	+	chr1.3:42639524-42639543	None:intergenic	60.0%
!!	AGTAGTGGGCAGCAGGGGTT+CGG	+	chr1.3:42639517-42639536	None:intergenic	60.0%
!!	GACAGAGTAGTGGGCAGCAG+GGG	+	chr1.3:42639522-42639541	None:intergenic	60.0%
!!	GGACAGAGTAGTGGGCAGCA+GGG	+	chr1.3:42639523-42639542	None:intergenic	60.0%
	AGTGGGCAGCAGGGGTTCGG+TGG	+	chr1.3:42639514-42639533	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	42639317	42640183	42639317	ID=MS.gene41100
chr1.3	mRNA	42639317	42640183	42639317	ID=MS.gene41100.t1;Parent=MS.gene41100
chr1.3	exon	42639317	42640183	42639317	ID=MS.gene41100.t1.exon1;Parent=MS.gene41100.t1
chr1.3	CDS	42639317	42640183	42639317	ID=cds.MS.gene41100.t1;Parent=MS.gene41100.t1

Gene Sequence

>MS.gene41100

ATGTTTTCACAAAATATGTTCTTTGCAAAACCCTCCACTTCATCAATCTCAATCCGACCGGTGTGGTCATTCAATCTCGAGTCAGAGTTCAAACTCATCCGGTCATTCGTGGATTCACATCCGATCATTTCAATGGACACCGAGTTTCCCGGCGTCATCATCCTCCCTGACGGCATCACTGACTTATCATCTTACCACCGAACCCCTGCTGCCCACTACTCTGTCCTCAGGGCGAATGTTGATAATCTTAATATCATCCAAGTCGGTCTGACTTTATCTGATGTTGATGGTAATCTTCCGAAATTGAGAAATGGAAACTCTGAGGAGTCTCTGATTTGGGAATTCAATTTCAGTGATTTTGACTTAGAGCGTGATATTCACGCGCACGAGTCTATTGAATTGCTGAAGAGTCAGGGGATTGATTTTGAGAAAAACAAGGACTTTGGGATTGACTCCAGGAGATTTGCTGAATTGATGATGAGTTCCGGACTTGTGTGTAATGAGGAGGTTAGCTGGGTGACATTTCATAGCGGTTATGATTTCGGATATTTGGTGAAGGCGTTGACTCAATATGCTTTGCCTGAAGAGCTTGCTGAGTTTCTGGTGCTGGTTAGGGTTTTCTTTGGGGAGAGTGTTTATGATGTGAAGCATTTGGCAAAGTTTTGTGAGGGGTTGTATGGTGGTTTGGATAGGGTTGGGAAGATGCTGAATGTGGATCGGGTTGTTGGGAAGACTCATGAGGCGGGTTCTGATAGTTTGCTGACTCTTCATGCTTTTAGGAAGATCAAGGAAGTTTACTTTGGGAATGATGATGGTCAACTGATGAAGTATGCTGGTGTGTTGTATGGATTAGAAAATGTGGTTTGA

Protein sequence

>MS.gene41100.t1

MFSQNMFFAKPSTSSISIRPVWSFNLESEFKLIRSFVDSHPIISMDTEFPGVIILPDGITDLSSYHRTPAAHYSVLRANVDNLNIIQVGLTLSDVDGNLPKLRNGNSEESLIWEFNFSDFDLERDIHAHESIELLKSQGIDFEKNKDFGIDSRRFAELMMSSGLVCNEEVSWVTFHSGYDFGYLVKALTQYALPEELAEFLVLVRVFFGESVYDVKHLAKFCEGLYGGLDRVGKMLNVDRVVGKTHEAGSDSLLTLHAFRKIKEVYFGNDDGQLMKYAGVLYGLENVV