AlfalfaGEDB | MS.gene21541

M. sativa cultivar XinJiangDaYe / MS.gene21541

KEGG: K12581
GO: GO:0003674 GO:0003676 GO:0005488 GO:0097159 GO:1901363
PFAM: PF04857.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21541.t1	XP_024625187.1	96.5	287	10	0	1	287	1	287	2.70E-156	561.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21541.t1	Q9FMS6	64.2	268	91	4	23	287	12	277	1.1e-92	341.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21541.t1	A0A396H7H5	96.5	287	10	0	1	287	1	287	2.0e-156	561.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049887	MS.gene21541	0.810875	9.27E-51	-1.69E-46
MS.gene050085	MS.gene21541	0.819447	1.16E-52	-1.69E-46
MS.gene050317	MS.gene21541	0.803962	2.71E-49	-1.69E-46
MS.gene050654	MS.gene21541	0.812064	5.12E-51	-1.69E-46
MS.gene050838	MS.gene21541	0.854287	1.36E-61	-1.69E-46
MS.gene051003	MS.gene21541	0.829319	5.50E-55	-1.69E-46
MS.gene051233	MS.gene21541	0.824835	6.51E-54	-1.69E-46
MS.gene051234	MS.gene21541	0.83065	2.61E-55	-1.69E-46
MS.gene051343	MS.gene21541	0.810957	8.90E-51	-1.69E-46
MS.gene05188	MS.gene21541	0.806747	7.08E-50	-1.69E-46
MS.gene052342	MS.gene21541	0.825918	3.61E-54	-1.69E-46
MS.gene052397	MS.gene21541	0.808969	2.39E-50	-1.69E-46
MS.gene052434	MS.gene21541	0.802219	6.22E-49	-1.69E-46
MS.gene053058	MS.gene21541	0.856319	3.49E-62	-1.69E-46
MS.gene053109	MS.gene21541	0.814975	1.17E-51	-1.69E-46
MS.gene053564	MS.gene21541	0.818753	1.66E-52	-1.69E-46
MS.gene055311	MS.gene21541	0.813816	2.11E-51	-1.69E-46
MS.gene055513	MS.gene21541	0.807231	5.59E-50	-1.69E-46
MS.gene056097	MS.gene21541	0.805821	1.11E-49	-1.69E-46
MS.gene056181	MS.gene21541	0.832878	7.35E-56	-1.69E-46
MS.gene056752	MS.gene21541	0.833918	4.05E-56	-1.69E-46
MS.gene057094	MS.gene21541	0.800804	1.21E-48	-1.69E-46
MS.gene05781	MS.gene21541	0.819387	1.19E-52	-1.69E-46
MS.gene057890	MS.gene21541	-0.807065	6.06E-50	-1.69E-46
MS.gene058261	MS.gene21541	0.837595	4.74E-57	-1.69E-46
MS.gene058638	MS.gene21541	0.800223	1.59E-48	-1.69E-46
MS.gene058639	MS.gene21541	0.803821	2.90E-49	-1.69E-46
MS.gene058758	MS.gene21541	0.807266	5.50E-50	-1.69E-46
MS.gene059146	MS.gene21541	0.821066	4.92E-53	-1.69E-46
MS.gene059170	MS.gene21541	0.800144	1.65E-48	-1.69E-46
MS.gene06011	MS.gene21541	0.811469	6.89E-51	-1.69E-46
MS.gene060296	MS.gene21541	0.817826	2.70E-52	-1.69E-46
MS.gene060563	MS.gene21541	0.818605	1.80E-52	-1.69E-46
MS.gene060763	MS.gene21541	0.813419	2.58E-51	-1.69E-46
MS.gene061006	MS.gene21541	0.816025	6.84E-52	-1.69E-46
MS.gene061100	MS.gene21541	0.810081	1.38E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene000609	MS.gene21541	PPI
MS.gene014264	MS.gene21541	PPI
MS.gene85904	MS.gene21541	PPI
MS.gene21541	MS.gene048794	PPI
MS.gene85903	MS.gene21541	PPI
MS.gene070320	MS.gene21541	PPI
MS.gene85901	MS.gene21541	PPI
MS.gene72157	MS.gene21541	PPI
MS.gene35444	MS.gene21541	PPI
MS.gene53123	MS.gene21541	PPI
MS.gene21541	MS.gene84309	PPI
MS.gene81219	MS.gene21541	PPI
MS.gene053225	MS.gene21541	PPI
MS.gene85905	MS.gene21541	PPI
MS.gene53120	MS.gene21541	PPI
MS.gene020895	MS.gene21541	PPI
MS.gene72178	MS.gene21541	PPI
MS.gene68798	MS.gene21541	PPI
MS.gene048793	MS.gene21541	PPI
MS.gene55324	MS.gene21541	PPI
MS.gene034250	MS.gene21541	PPI
MS.gene21541	MS.gene38199	PPI
MS.gene53121	MS.gene21541	PPI
MS.gene21541	MS.gene78556	PPI
MS.gene53119	MS.gene21541	PPI
MS.gene030414	MS.gene21541	PPI
MS.gene030415	MS.gene21541	PPI
MS.gene21541	MS.gene53122	PPI
MS.gene68205	MS.gene21541	PPI
MS.gene034438	MS.gene21541	PPI
MS.gene35431	MS.gene21541	PPI
MS.gene78557	MS.gene21541	PPI
MS.gene72160	MS.gene21541	PPI
MS.gene72156	MS.gene21541	PPI
MS.gene38057	MS.gene21541	PPI
MS.gene38201	MS.gene21541	PPI
MS.gene35692	MS.gene21541	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21541.t1	AT5G22250	64.179	268	91	4	23	287	12	277	8.79e-119	342
MS.gene21541.t1	AT3G44260	63.941	269	89	5	22	287	16	279	4.89e-116	335
MS.gene21541.t1	AT5G10960	53.933	267	114	5	22	287	9	267	2.58e-93	277
MS.gene21541.t1	AT2G32070	52.809	267	118	5	22	287	9	268	3.83e-93	277
MS.gene21541.t1	AT1G15920	48.727	275	134	4	15	286	6	276	9.23e-92	274
MS.gene21541.t1	AT1G15920	48.727	275	134	4	15	286	6	276	9.23e-92	274
MS.gene21541.t1	AT1G80780	51.504	266	122	4	22	287	9	267	1.26e-89	268
MS.gene21541.t1	AT1G80780	51.504	266	122	4	22	287	9	267	1.26e-89	268
MS.gene21541.t1	AT1G80780	51.504	266	122	4	22	287	9	267	1.86e-89	268
MS.gene21541.t1	AT1G06450	35.581	267	147	9	24	285	8	254	5.04e-42	148
MS.gene21541.t1	AT1G61470	33.333	246	141	6	24	264	1	228	1.41e-33	124
MS.gene21541.t1	AT1G27820	34.553	246	144	5	22	264	3	234	2.56e-33	124
MS.gene21541.t1	AT1G27890	34.167	240	141	5	28	264	4	229	4.20e-30	115
MS.gene21541.t1	AT3G44240	34.649	228	132	7	39	264	3	215	6.77e-29	110

Find 63 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGCTGAAAATAGTTATATT+TGG	0.169182	7.3:-8816512	MS.gene21541:CDS
TTCATAGTGCGTATGATTTC+GGG	0.187035	7.3:-8816305	MS.gene21541:CDS
TTGAAGGTGGAGAGGCTTAT+AGG	0.219054	7.3:-8816123	MS.gene21541:CDS
TTTCATAGTGCGTATGATTT+CGG	0.233508	7.3:-8816306	MS.gene21541:CDS
TGAAGGTGGAGAGGCTTATA+GGG	0.242741	7.3:-8816122	MS.gene21541:CDS
TGCGTATGATTTCGGGTATT+TGG	0.263514	7.3:-8816298	MS.gene21541:CDS
TGTAAGAATGGAACCATTAC+TGG	0.287488	7.3:+8816782	None:intergenic
GAAGCTGTTACCGGATGATT+TGG	0.329254	7.3:-8816259	MS.gene21541:CDS
TGCTGAAAATAGTTATATTT+GGG	0.331814	7.3:-8816511	MS.gene21541:CDS
TTTGTGCTGATTCTGTTAGC+TGG	0.344952	7.3:-8816335	MS.gene21541:CDS
TCAAATCTTGATAACGAATT+CGG	0.346517	7.3:-8816744	MS.gene21541:CDS
TTAACTCTTTCTGATCATAA+AGG	0.384845	7.3:-8816552	MS.gene21541:CDS
GAAGGTGTATTTCGGTGATA+TGG	0.431170	7.3:-8816217	MS.gene21541:CDS
CTGATTCTGTTGAGTTGTTG+AGG	0.433052	7.3:-8816443	MS.gene21541:CDS
AAAGAGGAATCGATTCCGTT+AGG	0.437401	7.3:+8816814	None:intergenic
TCAATGGACACGGAGTTTCC+CGG	0.451307	7.3:-8816684	MS.gene21541:CDS
ATATCAGAGAGCTTTACTTC+GGG	0.453384	7.3:-8816047	MS.gene21541:CDS
AGGTTGAATTTGATTCAGAT+TGG	0.457708	7.3:-8816576	MS.gene21541:CDS
AGGCTGGTGAAGGTGTATTT+CGG	0.458544	7.3:-8816225	MS.gene21541:CDS
CCACACTGATCTTGTAAGAA+TGG	0.461921	7.3:+8816770	None:intergenic
GGTTGAATTTGATTCAGATT+GGG	0.466535	7.3:-8816575	MS.gene21541:CDS
GTTGATGATGTCGTCCGGTT+TGG	0.470458	7.3:-8816358	MS.gene21541:CDS
ATTTGCATGGTGGATTGGAT+AGG	0.470548	7.3:-8816158	MS.gene21541:CDS
TGTTGAAAGCGAATGTTGAT+AGG	0.470879	7.3:-8816596	MS.gene21541:CDS
AAGAGGAATCGATTCCGTTA+GGG	0.475020	7.3:+8816815	None:intergenic
TACGAATTTGCATGGTGGAT+TGG	0.478435	7.3:-8816163	MS.gene21541:CDS
TTGTGCTGATTCTGTTAGCT+GGG	0.481953	7.3:-8816334	MS.gene21541:CDS
TCAGTATCCGCTAATTTCAA+TGG	0.486009	7.3:-8816700	MS.gene21541:CDS
GTTCTTGAACGGCGAATCAC+AGG	0.491118	7.3:+8816641	None:intergenic
CTTTCACCACGATCCAGTAA+TGG	0.491979	7.3:-8816795	MS.gene21541:CDS
TTGAGAAGAATCGTGAGTGT+GGG	0.492422	7.3:-8816404	MS.gene21541:CDS
AATATCAGAGAGCTTTACTT+CGG	0.499438	7.3:-8816048	MS.gene21541:CDS
TAGGGTTTGCAAGAGTTTGA+AGG	0.503822	7.3:-8816139	MS.gene21541:CDS
GCTGACGCAGAAGCTGTTAC+CGG	0.505236	7.3:-8816268	MS.gene21541:CDS
TTTGCATGGTGGATTGGATA+GGG	0.507227	7.3:-8816157	MS.gene21541:CDS
AAATATGCCGGTGTATTGTA+TGG	0.511609	7.3:-8816006	MS.gene21541:CDS
AGTTTCCCGGTGTGATTGTG+AGG	0.516131	7.3:-8816671	MS.gene21541:CDS
AGAATCAGCACAAACCAAAC+CGG	0.520363	7.3:+8816344	None:intergenic
TTTACTTCGGGAAAGCAGAC+GGG	0.525168	7.3:-8816035	MS.gene21541:CDS
GGTTTGCAAGAGTTTGAAGG+TGG	0.534617	7.3:-8816136	MS.gene21541:CDS
CTTTACTTCGGGAAAGCAGA+CGG	0.534703	7.3:-8816036	MS.gene21541:CDS
GCTGTTACCGGATGATTTGG+AGG	0.539995	7.3:-8816256	MS.gene21541:CDS
GACGGGTTTGTCAAATATGC+CGG	0.543121	7.3:-8816018	MS.gene21541:CDS
GCTGAGTTGATGATGTCGTC+CGG	0.548614	7.3:-8816363	MS.gene21541:CDS
CACGCGCCACGGTTCTTGAA+CGG	0.548659	7.3:+8816630	None:intergenic
TTACTGGATCGTGGTGAAAG+AGG	0.558261	7.3:+8816798	None:intergenic
GTTGAGTTGTTGAGGAGACA+AGG	0.563888	7.3:-8816435	MS.gene21541:CDS
GTTTCCCGGTGTGATTGTGA+GGG	0.568400	7.3:-8816670	MS.gene21541:CDS
TTTGAGAAGAATCGTGAGTG+TGG	0.568643	7.3:-8816405	MS.gene21541:CDS
TCCCGGTGTGATTGTGAGGG+CGG	0.571114	7.3:-8816667	MS.gene21541:CDS
GCAAGAGTTTGAAGGTGGAG+AGG	0.582586	7.3:-8816131	MS.gene21541:CDS
TCCGTGTCCATTGAAATTAG+CGG	0.591513	7.3:+8816693	None:intergenic
TTGAGTTGTTGAGGAGACAA+GGG	0.608645	7.3:-8816434	MS.gene21541:CDS
TCGATGTGAAGCATTTGATG+AGG	0.612916	7.3:-8816191	MS.gene21541:CDS
TTCTAATCCATACAATACAC+CGG	0.622880	7.3:+8815999	None:intergenic
ATCCGCCCTCACAATCACAC+CGG	0.632148	7.3:+8816665	None:intergenic
TCCGCTAATTTCAATGGACA+CGG	0.632987	7.3:-8816694	MS.gene21541:CDS
CTGCATAGAGACACGCGCCA+CGG	0.638041	7.3:+8816619	None:intergenic
TCCGCCCTCACAATCACACC+GGG	0.638539	7.3:+8816666	None:intergenic
ATAGGGAAGAGTCATCAAGC+AGG	0.666021	7.3:-8816105	MS.gene21541:CDS
ATGGAACCATTACTGGATCG+TGG	0.673080	7.3:+8816789	None:intergenic
GATTCGCCGTTCAAGAACCG+TGG	0.687694	7.3:-8816636	MS.gene21541:CDS
CCATTCTTACAAGATCAGTG+TGG	0.730924	7.3:-8816770	MS.gene21541:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATGCTGAAAATAGTTATATT+TGG	-	chr7.3:8816312-8816331	MS.gene21541:CDS	20.0%
!!	TGCTGAAAATAGTTATATTT+GGG	-	chr7.3:8816313-8816332	MS.gene21541:CDS	20.0%
!!!	TAATTTTAAGGATTTTGATG+TGG	-	chr7.3:8816340-8816359	MS.gene21541:CDS	20.0%
!!!	TATTTGGGAGTTTAATTTTA+AGG	-	chr7.3:8816328-8816347	MS.gene21541:CDS	20.0%
!	TTAACTCTTTCTGATCATAA+AGG	-	chr7.3:8816272-8816291	MS.gene21541:CDS	25.0%
!!!	TCAAATCTTGATAACGAATT+CGG	-	chr7.3:8816080-8816099	MS.gene21541:CDS	25.0%
	AATATCAGAGAGCTTTACTT+CGG	-	chr7.3:8816776-8816795	MS.gene21541:CDS	30.0%
	AGGTTGAATTTGATTCAGAT+TGG	-	chr7.3:8816248-8816267	MS.gene21541:CDS	30.0%
	GGTTGAATTTGATTCAGATT+GGG	-	chr7.3:8816249-8816268	MS.gene21541:CDS	30.0%
	TTCTAATCCATACAATACAC+CGG	+	chr7.3:8816828-8816847	None:intergenic	30.0%
	TTTCATAGTGCGTATGATTT+CGG	-	chr7.3:8816518-8816537	MS.gene21541:CDS	30.0%
!	CTATTTTCAGCATCTAACAT+TGG	+	chr7.3:8816305-8816324	None:intergenic	30.0%
	AAAAACTCCTCCAAATCATC+CGG	+	chr7.3:8816578-8816597	None:intergenic	35.0%
	AAATATGCCGGTGTATTGTA+TGG	-	chr7.3:8816818-8816837	MS.gene21541:CDS	35.0%
	ATATCAGAGAGCTTTACTTC+GGG	-	chr7.3:8816777-8816796	MS.gene21541:CDS	35.0%
	TAACCGCAAAAAAACCCTAA+CGG	-	chr7.3:8815995-8816014	MS.gene21541:CDS	35.0%
	TCAGTATCCGCTAATTTCAA+TGG	-	chr7.3:8816124-8816143	MS.gene21541:CDS	35.0%
	TGTAAGAATGGAACCATTAC+TGG	+	chr7.3:8816045-8816064	None:intergenic	35.0%
	TGTTGAAAGCGAATGTTGAT+AGG	-	chr7.3:8816228-8816247	MS.gene21541:CDS	35.0%
	TTCATAGTGCGTATGATTTC+GGG	-	chr7.3:8816519-8816538	MS.gene21541:CDS	35.0%
!	TTTTGTACGAATTTGCATGG+TGG	-	chr7.3:8816656-8816675	MS.gene21541:CDS	35.0%
!!	AGGTTTTGTACGAATTTGCA+TGG	-	chr7.3:8816653-8816672	MS.gene21541:CDS	35.0%
!!	ATGATTTGGAGGAGTTTTTG+AGG	-	chr7.3:8816579-8816598	MS.gene21541:CDS	35.0%
!!!	ATTCCGTTAGGGTTTTTTTG+CGG	+	chr7.3:8816001-8816020	None:intergenic	35.0%
	AGAATCAGCACAAACCAAAC+CGG	+	chr7.3:8816483-8816502	None:intergenic	40.0%
	CCACACTGATCTTGTAAGAA+TGG	+	chr7.3:8816057-8816076	None:intergenic	40.0%
	CCATTCTTACAAGATCAGTG+TGG	-	chr7.3:8816054-8816073	MS.gene21541:CDS	40.0%
	TAGGGTTTGCAAGAGTTTGA+AGG	-	chr7.3:8816685-8816704	MS.gene21541:CDS	40.0%
	TCCGCTAATTTCAATGGACA+CGG	-	chr7.3:8816130-8816149	MS.gene21541:CDS	40.0%
	TCCGTGTCCATTGAAATTAG+CGG	+	chr7.3:8816134-8816153	None:intergenic	40.0%
	TTGAGAAGAATCGTGAGTGT+GGG	-	chr7.3:8816420-8816439	MS.gene21541:CDS	40.0%
	TTTGAGAAGAATCGTGAGTG+TGG	-	chr7.3:8816419-8816438	MS.gene21541:CDS	40.0%
!	AAAGAGGAATCGATTCCGTT+AGG	+	chr7.3:8816013-8816032	None:intergenic	40.0%
!	AAGAGGAATCGATTCCGTTA+GGG	+	chr7.3:8816012-8816031	None:intergenic	40.0%
!	CTGATTCTGTTGAGTTGTTG+AGG	-	chr7.3:8816381-8816400	MS.gene21541:CDS	40.0%
!	GAAGGTGTATTTCGGTGATA+TGG	-	chr7.3:8816607-8816626	MS.gene21541:CDS	40.0%
!	TCGATGTGAAGCATTTGATG+AGG	-	chr7.3:8816633-8816652	MS.gene21541:CDS	40.0%
!	TGCGTATGATTTCGGGTATT+TGG	-	chr7.3:8816526-8816545	MS.gene21541:CDS	40.0%
!	TTGAGTTGTTGAGGAGACAA+GGG	-	chr7.3:8816390-8816409	MS.gene21541:CDS	40.0%
!!	ATTTGCATGGTGGATTGGAT+AGG	-	chr7.3:8816666-8816685	MS.gene21541:CDS	40.0%
!!	TACGAATTTGCATGGTGGAT+TGG	-	chr7.3:8816661-8816680	MS.gene21541:CDS	40.0%
!!	TTGTGCTGATTCTGTTAGCT+GGG	-	chr7.3:8816490-8816509	MS.gene21541:CDS	40.0%
!!	TTTGCATGGTGGATTGGATA+GGG	-	chr7.3:8816667-8816686	MS.gene21541:CDS	40.0%
!!	TTTGTGCTGATTCTGTTAGC+TGG	-	chr7.3:8816489-8816508	MS.gene21541:CDS	40.0%
	ATAGGGAAGAGTCATCAAGC+AGG	-	chr7.3:8816719-8816738	MS.gene21541:CDS	45.0%
	ATGGAACCATTACTGGATCG+TGG	+	chr7.3:8816038-8816057	None:intergenic	45.0%
	CTTTACTTCGGGAAAGCAGA+CGG	-	chr7.3:8816788-8816807	MS.gene21541:CDS	45.0%
	CTTTCACCACGATCCAGTAA+TGG	-	chr7.3:8816029-8816048	MS.gene21541:CDS	45.0%
	GAAGCTGTTACCGGATGATT+TGG	-	chr7.3:8816565-8816584	MS.gene21541:CDS	45.0%
	GGTTTGCAAGAGTTTGAAGG+TGG	-	chr7.3:8816688-8816707	MS.gene21541:CDS	45.0%
	TGAAGGTGGAGAGGCTTATA+GGG	-	chr7.3:8816702-8816721	MS.gene21541:CDS	45.0%
	TTACTGGATCGTGGTGAAAG+AGG	+	chr7.3:8816029-8816048	None:intergenic	45.0%
	TTGAAGGTGGAGAGGCTTAT+AGG	-	chr7.3:8816701-8816720	MS.gene21541:CDS	45.0%
	TTTACTTCGGGAAAGCAGAC+GGG	-	chr7.3:8816789-8816808	MS.gene21541:CDS	45.0%
!	AGGCTGGTGAAGGTGTATTT+CGG	-	chr7.3:8816599-8816618	MS.gene21541:CDS	45.0%
!	GACGGGTTTGTCAAATATGC+CGG	-	chr7.3:8816806-8816825	MS.gene21541:CDS	45.0%
!	GTTGAGTTGTTGAGGAGACA+AGG	-	chr7.3:8816389-8816408	MS.gene21541:CDS	45.0%
!!!	TTTGGAGGAGTTTTTGAGGC+TGG	-	chr7.3:8816583-8816602	MS.gene21541:CDS	45.0%
	AGTTTCCCGGTGTGATTGTG+AGG	-	chr7.3:8816153-8816172	MS.gene21541:CDS	50.0%
	GCAAGAGTTTGAAGGTGGAG+AGG	-	chr7.3:8816693-8816712	MS.gene21541:CDS	50.0%
	GTTCTTGAACGGCGAATCAC+AGG	+	chr7.3:8816186-8816205	None:intergenic	50.0%
	GTTTCCCGGTGTGATTGTGA+GGG	-	chr7.3:8816154-8816173	MS.gene21541:CDS	50.0%
	TCAATGGACACGGAGTTTCC+CGG	-	chr7.3:8816140-8816159	MS.gene21541:CDS	50.0%
!	GCTGTTACCGGATGATTTGG+AGG	-	chr7.3:8816568-8816587	MS.gene21541:CDS	50.0%
!!	GCTGAGTTGATGATGTCGTC+CGG	-	chr7.3:8816461-8816480	MS.gene21541:CDS	50.0%
!!	GTTGATGATGTCGTCCGGTT+TGG	-	chr7.3:8816466-8816485	MS.gene21541:CDS	50.0%
!!!	GGAGTTTTTGAGGCTGGTGA+AGG	-	chr7.3:8816589-8816608	MS.gene21541:CDS	50.0%
	ATCCGCCCTCACAATCACAC+CGG	+	chr7.3:8816162-8816181	None:intergenic	55.0%
	GATTCGCCGTTCAAGAACCG+TGG	-	chr7.3:8816188-8816207	MS.gene21541:CDS	55.0%
	GCTGACGCAGAAGCTGTTAC+CGG	-	chr7.3:8816556-8816575	MS.gene21541:CDS	55.0%
	CACGCGCCACGGTTCTTGAA+CGG	+	chr7.3:8816197-8816216	None:intergenic	60.0%
	CTGCATAGAGACACGCGCCA+CGG	+	chr7.3:8816208-8816227	None:intergenic	60.0%
	TCCCGGTGTGATTGTGAGGG+CGG	-	chr7.3:8816157-8816176	MS.gene21541:CDS	60.0%
	TCCGCCCTCACAATCACACC+GGG	+	chr7.3:8816161-8816180	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.3	gene	8815990	8816856	8815990	ID=MS.gene21541
chr7.3	mRNA	8815990	8816856	8815990	ID=MS.gene21541.t1;Parent=MS.gene21541
chr7.3	exon	8815990	8816856	8815990	ID=MS.gene21541.t1.exon1;Parent=MS.gene21541.t1
chr7.3	CDS	8815990	8816856	8815990	ID=cds.MS.gene21541.t1;Parent=MS.gene21541.t1

Gene Sequence

>MS.gene21541

ATGTGTAACCGCAAAAAAACCCTAACGGAATCGATTCCTCTTTCACCACGATCCAGTAATGGTTCCATTCTTACAAGATCAGTGTGGAGTTCAAATCTTGATAACGAATTCGGTTTGATTCGATCGTTAATCGATCAGTATCCGCTAATTTCAATGGACACGGAGTTTCCCGGTGTGATTGTGAGGGCGGATTCCTGTGATTCGCCGTTCAAGAACCGTGGCGCGTGTCTCTATGCAGTGTTGAAAGCGAATGTTGATAGGTTGAATTTGATTCAGATTGGGTTAACTCTTTCTGATCATAAAGGTAATCTTCCAATGTTAGATGCTGAAAATAGTTATATTTGGGAGTTTAATTTTAAGGATTTTGATGTGGCGCGTGATGATCACGCTGCTGATTCTGTTGAGTTGTTGAGGAGACAAGGGATTGATTTTGAGAAGAATCGTGAGTGTGGGATTGATTCTGTTAAGTTTGCTGAGTTGATGATGTCGTCCGGTTTGGTTTGTGCTGATTCTGTTAGCTGGGTAACGTTTCATAGTGCGTATGATTTCGGGTATTTGGTGAAATTGCTGACGCAGAAGCTGTTACCGGATGATTTGGAGGAGTTTTTGAGGCTGGTGAAGGTGTATTTCGGTGATATGGTATTCGATGTGAAGCATTTGATGAGGTTTTGTACGAATTTGCATGGTGGATTGGATAGGGTTTGCAAGAGTTTGAAGGTGGAGAGGCTTATAGGGAAGAGTCATCAAGCAGGTTCAGATAGTTTGCTTACTTTGCATGCTTTTCAGAATATCAGAGAGCTTTACTTCGGGAAAGCAGACGGGTTTGTCAAATATGCCGGTGTATTGTATGGATTAGAAGTTTGCTGA

Protein sequence

>MS.gene21541.t1

MCNRKKTLTESIPLSPRSSNGSILTRSVWSSNLDNEFGLIRSLIDQYPLISMDTEFPGVIVRADSCDSPFKNRGACLYAVLKANVDRLNLIQIGLTLSDHKGNLPMLDAENSYIWEFNFKDFDVARDDHAADSVELLRRQGIDFEKNRECGIDSVKFAELMMSSGLVCADSVSWVTFHSAYDFGYLVKLLTQKLLPDDLEEFLRLVKVYFGDMVFDVKHLMRFCTNLHGGLDRVCKSLKVERLIGKSHQAGSDSLLTLHAFQNIRELYFGKADGFVKYAGVLYGLEVC