Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72540.t1 | XP_013455384.1 | 96.6 | 678 | 23 | 0 | 1 | 678 | 1 | 678 | 0.00E+00 | 1328.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72540.t1 | Q9FFZ1 | 24.9 | 305 | 181 | 8 | 419 | 678 | 115 | 416 | 1.3e-14 | 83.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72540.t1 | A0A072UU84 | 96.6 | 678 | 23 | 0 | 1 | 678 | 1 | 678 | 0.0e+00 | 1328.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050426 | MS.gene72540 | -0.809124 | 2.21E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene72540 | 0.836506 | 8.99E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene72540 | 0.801978 | 6.98E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene72540 | 0.85721 | 1.91E-62 | -1.69E-46 |
| MS.gene051582 | MS.gene72540 | 0.828662 | 7.94E-55 | -1.69E-46 |
| MS.gene051588 | MS.gene72540 | 0.850082 | 2.14E-60 | -1.69E-46 |
| MS.gene052011 | MS.gene72540 | -0.856806 | 2.51E-62 | -1.69E-46 |
| MS.gene052134 | MS.gene72540 | 0.802654 | 5.06E-49 | -1.69E-46 |
| MS.gene052135 | MS.gene72540 | 0.811293 | 7.53E-51 | -1.69E-46 |
| MS.gene052253 | MS.gene72540 | 0.832085 | 1.16E-55 | -1.69E-46 |
| MS.gene052414 | MS.gene72540 | 0.832688 | 8.20E-56 | -1.69E-46 |
| MS.gene052481 | MS.gene72540 | 0.830373 | 3.05E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene72540 | 0.80991 | 1.50E-50 | -1.69E-46 |
| MS.gene052505 | MS.gene72540 | 0.820976 | 5.16E-53 | -1.69E-46 |
| MS.gene052813 | MS.gene72540 | 0.818223 | 2.19E-52 | -1.69E-46 |
| MS.gene052982 | MS.gene72540 | 0.850746 | 1.39E-60 | -1.69E-46 |
| MS.gene053169 | MS.gene72540 | 0.806727 | 7.15E-50 | -1.69E-46 |
| MS.gene05335 | MS.gene72540 | 0.813841 | 2.09E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene72540 | 0.844145 | 9.06E-59 | -1.69E-46 |
| MS.gene054556 | MS.gene72540 | 0.818509 | 1.89E-52 | -1.69E-46 |
| MS.gene054719 | MS.gene72540 | 0.820916 | 5.33E-53 | -1.69E-46 |
| MS.gene054920 | MS.gene72540 | 0.861588 | 9.23E-64 | -1.69E-46 |
| MS.gene055116 | MS.gene72540 | 0.822955 | 1.80E-53 | -1.69E-46 |
| MS.gene055369 | MS.gene72540 | 0.86295 | 3.52E-64 | -1.69E-46 |
| MS.gene05553 | MS.gene72540 | 0.809617 | 1.73E-50 | -1.69E-46 |
| MS.gene055744 | MS.gene72540 | 0.80264 | 5.10E-49 | -1.69E-46 |
| MS.gene05594 | MS.gene72540 | 0.813235 | 2.84E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene72540 | 0.807313 | 5.37E-50 | -1.69E-46 |
| MS.gene056514 | MS.gene72540 | 0.826171 | 3.14E-54 | -1.69E-46 |
| MS.gene056723 | MS.gene72540 | 0.878328 | 3.07E-69 | -1.69E-46 |
| MS.gene057124 | MS.gene72540 | 0.804659 | 1.94E-49 | -1.69E-46 |
| MS.gene057476 | MS.gene72540 | 0.818424 | 1.97E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene72540 | 0.802585 | 5.23E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene72540 | 0.804651 | 1.95E-49 | -1.69E-46 |
| MS.gene058376 | MS.gene72540 | 0.810176 | 1.31E-50 | -1.69E-46 |
| MS.gene058444 | MS.gene72540 | 0.810488 | 1.12E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene72540 | 0.8279 | 1.21E-54 | -1.69E-46 |
| MS.gene059082 | MS.gene72540 | 0.81955 | 1.10E-52 | -1.69E-46 |
| MS.gene059141 | MS.gene72540 | 0.828625 | 8.10E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene72540 | 0.864204 | 1.44E-64 | -1.69E-46 |
| MS.gene059462 | MS.gene72540 | 0.831351 | 1.75E-55 | -1.69E-46 |
| MS.gene059499 | MS.gene72540 | 0.810553 | 1.09E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene72540 | 0.822278 | 2.58E-53 | -1.69E-46 |
| MS.gene059933 | MS.gene72540 | 0.833281 | 5.84E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene72540 | 0.817816 | 2.71E-52 | -1.69E-46 |
| MS.gene061154 | MS.gene72540 | 0.826058 | 3.34E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72540.t1 | MTR_4g036495 | 96.608 | 678 | 23 | 0 | 1 | 678 | 1 | 678 | 0.0 | 1359 |
| MS.gene72540.t1 | MTR_8g077185 | 33.103 | 290 | 177 | 8 | 404 | 680 | 84 | 369 | 1.85e-39 | 149 |
| MS.gene72540.t1 | MTR_5g056200 | 29.878 | 328 | 200 | 10 | 362 | 669 | 16 | 333 | 1.63e-32 | 129 |
| MS.gene72540.t1 | MTR_1g076920 | 31.169 | 308 | 178 | 10 | 398 | 676 | 88 | 390 | 5.52e-26 | 111 |
| MS.gene72540.t1 | MTR_1g088420 | 29.897 | 194 | 122 | 4 | 38 | 218 | 119 | 311 | 3.31e-17 | 85.1 |
| MS.gene72540.t1 | MTR_3g108700 | 25.348 | 359 | 168 | 11 | 34 | 358 | 93 | 385 | 8.55e-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72540.t1 | AT4G25290 | 53.824 | 680 | 303 | 5 | 3 | 679 | 2 | 673 | 0.0 | 758 |
| MS.gene72540.t1 | AT4G36530 | 32.862 | 283 | 173 | 7 | 404 | 673 | 27 | 305 | 1.26e-35 | 137 |
| MS.gene72540.t1 | AT4G36530 | 32.862 | 283 | 173 | 7 | 404 | 673 | 84 | 362 | 5.46e-35 | 137 |
| MS.gene72540.t1 | AT5G19850 | 32.639 | 288 | 165 | 8 | 401 | 669 | 75 | 352 | 1.04e-31 | 127 |
| MS.gene72540.t1 | AT5G38520 | 28.990 | 307 | 184 | 11 | 399 | 678 | 62 | 361 | 1.75e-23 | 103 |
| MS.gene72540.t1 | AT5G38520 | 28.213 | 319 | 183 | 11 | 399 | 678 | 62 | 373 | 2.06e-22 | 100 |
| MS.gene72540.t1 | AT2G47590 | 28.947 | 190 | 121 | 4 | 42 | 218 | 120 | 308 | 1.85e-15 | 79.7 |
| MS.gene72540.t1 | AT5G24850 | 25.568 | 352 | 169 | 11 | 29 | 358 | 79 | 359 | 2.02e-15 | 80.5 |
Find 163 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATCATTTATTGCACTATT+TGG | 0.145894 | 4.1:-62766450 | MS.gene72540:CDS |
| GGCTGCATATTTGAGGTATT+TGG | 0.200869 | 4.1:-62766967 | MS.gene72540:CDS |
| ATTTGGTCCTGCGCTATCTT+TGG | 0.256694 | 4.1:-62766433 | MS.gene72540:CDS |
| CGGTGATCGAATACATAAAT+TGG | 0.258554 | 4.1:+62768894 | None:intergenic |
| GTTCTTCTTGTACATGGTTT+TGG | 0.264043 | 4.1:-62765745 | MS.gene72540:CDS |
| TGGCTAGTGGTATTGGCTTT+TGG | 0.264878 | 4.1:-62766125 | MS.gene72540:intron |
| TGGAACTAGGGATTGAAAAT+TGG | 0.264946 | 4.1:+62768914 | None:intergenic |
| TGATGATATAATGGGATTTA+TGG | 0.268327 | 4.1:-62767204 | MS.gene72540:CDS |
| TTGTGACGGTGTTATAATTA+AGG | 0.284592 | 4.1:-62764199 | MS.gene72540:CDS |
| TCCTGTGTATGATGATATAA+TGG | 0.288894 | 4.1:-62767213 | MS.gene72540:CDS |
| GCTATTACATTGTTAGGATT+TGG | 0.293820 | 4.1:-62765658 | MS.gene72540:CDS |
| TCTGTGTTTGTTACACAAAA+AGG | 0.298646 | 4.1:-62767032 | MS.gene72540:CDS |
| GTTTGGGCTATTACATTGTT+AGG | 0.300332 | 4.1:-62765664 | MS.gene72540:CDS |
| CTAGAGCTGGAAATCGAGTT+TGG | 0.313646 | 4.1:-62765681 | MS.gene72540:CDS |
| TCTAATCTCATGATTAAGTT+TGG | 0.324364 | 4.1:-62768718 | MS.gene72540:CDS |
| GTGGCATTGGAGTCAGAAAT+TGG | 0.327611 | 4.1:+62764243 | None:intergenic |
| GTCTTCCACATTTCAATCCT+TGG | 0.329388 | 4.1:+62767900 | None:intergenic |
| AGGATAGTATTCACTGATTC+TGG | 0.333253 | 4.1:+62764038 | None:intergenic |
| GGTGGAGAGAAGCGGTTGTT+AGG | 0.339576 | 4.1:+62769032 | None:intergenic |
| AACATTACCTGGTGCAGAAA+TGG | 0.339638 | 4.1:-62767384 | MS.gene72540:CDS |
| CCTGCTGTTCTTCTTGTACA+TGG | 0.339681 | 4.1:-62765751 | MS.gene72540:CDS |
| TAAAGCTAAAGATGCTTTCC+AGG | 0.341211 | 4.1:+62764459 | None:intergenic |
| CACCTTGTTGGCAACTCAAT+TGG | 0.341981 | 4.1:-62765544 | MS.gene72540:CDS |
| TGCAGAAATGGAACTGGATT+GGG | 0.348216 | 4.1:-62767372 | MS.gene72540:CDS |
| TTTGGTCCTGCGCTATCTTT+GGG | 0.350175 | 4.1:-62766432 | MS.gene72540:CDS |
| TCCTGGTGTGCCTGTGGTCC+TGG | 0.356320 | 4.1:-62764477 | MS.gene72540:CDS |
| AGCTCAGTATATACAATGTT+TGG | 0.371053 | 4.1:+62765622 | None:intergenic |
| TGCTGAAATCTAGTGAGAAC+AGG | 0.371964 | 4.1:-62767103 | MS.gene72540:CDS |
| GCAGGGTTCTTATCTCCCTT+TGG | 0.386221 | 4.1:-62766351 | MS.gene72540:CDS |
| TTCTGATGAAATGCTGGAAC+TGG | 0.395021 | 4.1:-62768788 | MS.gene72540:CDS |
| TGAATACTATCCTTTGTGAT+TGG | 0.400538 | 4.1:-62764028 | MS.gene72540:CDS |
| CTGATTCTGGCACTTCATCA+TGG | 0.403175 | 4.1:+62764051 | None:intergenic |
| CATATTAAGTCTTATGATCC+TGG | 0.403575 | 4.1:-62764494 | MS.gene72540:intron |
| AGGTTATATTGTTGCTATTG+TGG | 0.405559 | 4.1:-62765361 | MS.gene72540:CDS |
| CACACAGGTTCTGCAAAATC+TGG | 0.407255 | 4.1:-62767468 | MS.gene72540:intron |
| TTGCTATTGTGGCTCGAGTT+TGG | 0.412882 | 4.1:-62765350 | MS.gene72540:CDS |
| GACAAACGTCAGTGGCTTCA+TGG | 0.418837 | 4.1:-62764813 | MS.gene72540:CDS |
| ACGTCAGTGGCTTCATGGTT+GGG | 0.419153 | 4.1:-62764808 | MS.gene72540:CDS |
| CGAATACATAAATTGGAACT+AGG | 0.426978 | 4.1:+62768901 | None:intergenic |
| TGTTTGCTGTTCGAGATTTG+AGG | 0.427628 | 4.1:-62768762 | MS.gene72540:CDS |
| CGGGAACCGGTCCACCTTGT+TGG | 0.435999 | 4.1:-62765556 | MS.gene72540:CDS |
| GGAAAAGATTCTAATTATAC+AGG | 0.443244 | 4.1:-62764396 | MS.gene72540:intron |
| GTAACAAACACAGATTCATT+TGG | 0.444156 | 4.1:+62767041 | None:intergenic |
| CCGTGACAACATACACAGTT+TGG | 0.448182 | 4.1:-62765704 | MS.gene72540:CDS |
| ATGCATTGGCTGCATATTTG+AGG | 0.450155 | 4.1:-62766974 | MS.gene72540:CDS |
| CAACTGACACGGCCATTGTA+TGG | 0.452717 | 4.1:-62768989 | MS.gene72540:CDS |
| TTCTCTCCACCTCGCCGTCT+CGG | 0.454038 | 4.1:-62769020 | MS.gene72540:CDS |
| CTTCAGCTTTCAACATTACC+TGG | 0.455179 | 4.1:-62767395 | MS.gene72540:CDS |
| GAAAGTGAGGGAAAATTAGA+AGG | 0.455516 | 4.1:+62769062 | None:intergenic |
| GACATAAATCAAGAGATGAT+TGG | 0.456723 | 4.1:-62767172 | MS.gene72540:CDS |
| GTGCAGAAATGGAACTGGAT+TGG | 0.457953 | 4.1:-62767373 | MS.gene72540:CDS |
| TGTTGATGTTGTGCGGGAAC+CGG | 0.458473 | 4.1:-62765569 | MS.gene72540:CDS |
| AGGGAACGGCTCGTGATGAT+TGG | 0.459477 | 4.1:-62766944 | MS.gene72540:CDS |
| AAGCATAGCCACTGTGGCAT+TGG | 0.460190 | 4.1:+62764230 | None:intergenic |
| AACGTCAGTGGCTTCATGGT+TGG | 0.463878 | 4.1:-62764809 | MS.gene72540:CDS |
| CTCAACTGCTGCTGCAATGG+TGG | 0.464086 | 4.1:+62766317 | None:intergenic |
| CCATCGTTTGAAATCGATCA+AGG | 0.468948 | 4.1:-62767937 | MS.gene72540:CDS |
| GAAGCTGCAGTGAGGAGTCC+AGG | 0.469715 | 4.1:+62768936 | None:intergenic |
| TAGAGCTGGAAATCGAGTTT+GGG | 0.469953 | 4.1:-62765680 | MS.gene72540:CDS |
| TGTATATACTGAGCTCTTGT+GGG | 0.470613 | 4.1:-62765614 | MS.gene72540:CDS |
| TATACAATTGCCGGTGAAGA+TGG | 0.471229 | 4.1:-62765775 | MS.gene72540:CDS |
| GTGGAGAGAAGCGGTTGTTA+GGG | 0.474275 | 4.1:+62769033 | None:intergenic |
| ACCTGGTGCAGAAATGGAAC+TGG | 0.474407 | 4.1:-62767378 | MS.gene72540:CDS |
| GTTAGGGAAGCGGGAAAGTG+AGG | 0.474853 | 4.1:+62769049 | None:intergenic |
| CGTGCTTCAGAAAGTCGAAA+TGG | 0.475834 | 4.1:-62766474 | MS.gene72540:CDS |
| AGATCGAAAGGGCAGATGAT+TGG | 0.478592 | 4.1:-62764633 | MS.gene72540:CDS |
| AAGGAAAATGCGGGAAAGTG+AGG | 0.479377 | 4.1:+62769081 | None:intergenic |
| AAGAAGATAGTTAAGAGGTA+TGG | 0.479952 | 4.1:+62764430 | None:intergenic |
| TTGTATATACTGAGCTCTTG+TGG | 0.482708 | 4.1:-62765615 | MS.gene72540:CDS |
| TGATTCTGGCACTTCATCAT+GGG | 0.483873 | 4.1:+62764052 | None:intergenic |
| ATAATTAAGGAATTAGATGC+TGG | 0.485194 | 4.1:-62764186 | MS.gene72540:intron |
| CAAAGCTACTTGTGTATTTG+CGG | 0.486980 | 4.1:-62768006 | MS.gene72540:CDS |
| GTCCAGGGTGATCGTCTGTT+CGG | 0.487765 | 4.1:+62768952 | None:intergenic |
| GAAGCGGTTGTTAGGGAAGC+GGG | 0.489343 | 4.1:+62769040 | None:intergenic |
| AAAGGAAATGTTGTTGGAGG+TGG | 0.498142 | 4.1:-62767014 | MS.gene72540:CDS |
| AATCATCTCTTGATTTATGT+CGG | 0.500980 | 4.1:+62767174 | None:intergenic |
| AGGAATTCGTTGAAAGGTCG+TGG | 0.502944 | 4.1:-62768742 | MS.gene72540:CDS |
| TCCAGTTCCATTTCTGCACC+AGG | 0.503225 | 4.1:+62767377 | None:intergenic |
| CCTGTGTATGATGATATAAT+GGG | 0.503258 | 4.1:-62767212 | MS.gene72540:CDS |
| CACCATTGCAGCAGCAGTTG+AGG | 0.503650 | 4.1:-62766316 | MS.gene72540:CDS |
| CAGCATTTCTCTGCCTAACA+AGG | 0.504064 | 4.1:+62767121 | None:intergenic |
| TATGAGAAAGAACGAAATGC+AGG | 0.505695 | 4.1:-62766369 | MS.gene72540:CDS |
| AGATGATTGGAATTTGATCA+AGG | 0.507204 | 4.1:-62767159 | MS.gene72540:CDS |
| AGAAATCAGATAAATAATGA+TGG | 0.509438 | 4.1:-62766097 | MS.gene72540:CDS |
| AGCCTCAACTGCTGCTGCAA+TGG | 0.511346 | 4.1:+62766314 | None:intergenic |
| GAAAACAGTCAACACGGGTA+TGG | 0.511478 | 4.1:-62766075 | MS.gene72540:CDS |
| GTATGAGCTCTGCTTTATCA+TGG | 0.513231 | 4.1:-62767970 | MS.gene72540:CDS |
| AGTCAACACGGGTATGGAGC+TGG | 0.515119 | 4.1:-62766069 | MS.gene72540:CDS |
| ATTGTCTTGATAAACAGTGC+TGG | 0.518060 | 4.1:-62765309 | MS.gene72540:CDS |
| CTTGTTGGCAACTCAATTGG+TGG | 0.520296 | 4.1:-62765541 | MS.gene72540:intron |
| CTTCATTGTTGATGTTGTGC+GGG | 0.524137 | 4.1:-62765575 | MS.gene72540:CDS |
| GAAAATTAGAAGGAAAATGC+GGG | 0.525969 | 4.1:+62769072 | None:intergenic |
| TCTTCAAGAAGATAGTTAAG+AGG | 0.526413 | 4.1:+62764425 | None:intergenic |
| CTATCTTCTTGAAGATGTCA+AGG | 0.530261 | 4.1:-62764417 | MS.gene72540:CDS |
| TGCATATTTGAGGTATTTGG+AGG | 0.532972 | 4.1:-62766964 | MS.gene72540:CDS |
| ATACACAGTTTGGCTAGAGC+TGG | 0.533504 | 4.1:-62765694 | MS.gene72540:CDS |
| GATACACCAGCTTGCTACTC+AGG | 0.536461 | 4.1:-62768680 | MS.gene72540:intron |
| ATATAATGTACTAAATGCAT+TGG | 0.537147 | 4.1:-62766988 | MS.gene72540:CDS |
| ATGATGACTTTAAGAAACTA+CGG | 0.548801 | 4.1:-62767436 | MS.gene72540:CDS |
| TCAATCCTTGGAGTGCCTTG+TGG | 0.551423 | 4.1:+62767912 | None:intergenic |
| GAATACATAAATTGGAACTA+GGG | 0.551772 | 4.1:+62768902 | None:intergenic |
| TTGTCTTGATAAACAGTGCT+GGG | 0.551930 | 4.1:-62765308 | MS.gene72540:CDS |
| TTTGAGGTATTTGGAGGGAA+CGG | 0.551995 | 4.1:-62766958 | MS.gene72540:CDS |
| TACAATGGCCGTGTCAGTTG+CGG | 0.552980 | 4.1:+62768992 | None:intergenic |
| ACATCAGCTGAAACCTTGTT+AGG | 0.553481 | 4.1:-62767134 | MS.gene72540:CDS |
| TGTATTTGCGGAACAAGAGG+TGG | 0.556168 | 4.1:-62767994 | MS.gene72540:CDS |
| GCACTTCATCATGGGGACAA+TGG | 0.557928 | 4.1:+62764060 | None:intergenic |
| GATTTGAGGAATTCGTTGAA+AGG | 0.558150 | 4.1:-62768748 | MS.gene72540:CDS |
| ACACGGGTATGGAGCTGGAA+TGG | 0.558876 | 4.1:-62766064 | MS.gene72540:CDS |
| CGGTTCAACCGCAACTGACA+CGG | 0.559689 | 4.1:-62769000 | MS.gene72540:CDS |
| TCCAGGACCACAGGCACACC+AGG | 0.564941 | 4.1:+62764476 | None:intergenic |
| GAGTTGCCAACAAGGTGGAC+CGG | 0.571836 | 4.1:+62765550 | None:intergenic |
| CCATGTACAAGAAGAACAGC+AGG | 0.572158 | 4.1:+62765751 | None:intergenic |
| TGCTTTGCAGAAGATCGAAA+GGG | 0.572339 | 4.1:-62764644 | MS.gene72540:intron |
| CACCAATTGAGTTGCCAACA+AGG | 0.572948 | 4.1:+62765542 | None:intergenic |
| AACAGCAGGACCATCTTCAC+CGG | 0.573387 | 4.1:+62765765 | None:intergenic |
| TTGTGTATTTGCGGAACAAG+AGG | 0.575726 | 4.1:-62767997 | MS.gene72540:CDS |
| GAAAGTGAGGAGAGTCGTCA+TGG | 0.577475 | 4.1:+62769094 | None:intergenic |
| CCAAACTGTGTATGTTGTCA+CGG | 0.578336 | 4.1:+62765704 | None:intergenic |
| GTGCTTTGCAGAAGATCGAA+AGG | 0.578448 | 4.1:-62764645 | MS.gene72540:intron |
| TTAGGGAAGCGGGAAAGTGA+GGG | 0.580284 | 4.1:+62769050 | None:intergenic |
| GATACTTACTTGAAAGAATG+CGG | 0.583379 | 4.1:+62768874 | None:intergenic |
| AAGATGCTTTCCAGGACCAC+AGG | 0.585145 | 4.1:+62764467 | None:intergenic |
| CTCCGAACAGACGATCACCC+TGG | 0.585613 | 4.1:-62768954 | MS.gene72540:CDS |
| GGAAAATTAGAAGGAAAATG+CGG | 0.587433 | 4.1:+62769071 | None:intergenic |
| TTATGATCCTGGTGTGCCTG+TGG | 0.590576 | 4.1:-62764483 | MS.gene72540:CDS |
| AGAAGCGGTTGTTAGGGAAG+CGG | 0.592302 | 4.1:+62769039 | None:intergenic |
| AGTTGAGGCTGTGTGTTCGA+AGG | 0.597781 | 4.1:-62766301 | MS.gene72540:CDS |
| AGCACTGTTTATCAAGACAA+TGG | 0.601181 | 4.1:+62765311 | None:intergenic |
| CTTACACTTGGATTAGACAA+TGG | 0.602900 | 4.1:+62765258 | None:intergenic |
| CCTTGATCGATTTCAAACGA+TGG | 0.609979 | 4.1:+62767937 | None:intergenic |
| CTCTTTAAGCATAGCCACTG+TGG | 0.610327 | 4.1:+62764224 | None:intergenic |
| ATAATTCCCAAAGATAGCGC+AGG | 0.611138 | 4.1:+62766426 | None:intergenic |
| GCTGAAGTGGTGTAGTCACA+TGG | 0.611717 | 4.1:+62767411 | None:intergenic |
| AGGTTCCACAAGGCACTCCA+AGG | 0.614435 | 4.1:-62767917 | MS.gene72540:CDS |
| AAGCTGCAGTGAGGAGTCCA+GGG | 0.615731 | 4.1:+62768937 | None:intergenic |
| CCCATTATATCATCATACAC+AGG | 0.617500 | 4.1:+62767212 | None:intergenic |
| GACGGCGAGGTGGAGAGAAG+CGG | 0.620241 | 4.1:+62769024 | None:intergenic |
| GCATATTTGAGGTATTTGGA+GGG | 0.621876 | 4.1:-62766963 | MS.gene72540:CDS |
| GCAGAAATGGAACTGGATTG+GGG | 0.629495 | 4.1:-62767371 | MS.gene72540:intron |
| GTGGCAGCTGAATATCCAAA+GGG | 0.629662 | 4.1:+62766336 | None:intergenic |
| TGAGGCTGTGTGTTCGAAGG+AGG | 0.632016 | 4.1:-62766298 | MS.gene72540:intron |
| TAAGTACCTGAGTAGCAAGC+TGG | 0.632747 | 4.1:+62768674 | None:intergenic |
| GGTGGCAGCTGAATATCCAA+AGG | 0.632948 | 4.1:+62766335 | None:intergenic |
| GCTGAAATCTAGTGAGAACA+GGG | 0.634491 | 4.1:-62767102 | MS.gene72540:CDS |
| ACTTCATTGTTGATGTTGTG+CGG | 0.637401 | 4.1:-62765576 | MS.gene72540:CDS |
| AAATCGATCAAGGTTCCACA+AGG | 0.638278 | 4.1:-62767927 | MS.gene72540:CDS |
| ATGAGAAAGAACGAAATGCA+GGG | 0.638724 | 4.1:-62766368 | MS.gene72540:CDS |
| GTTGAACCGAGACGGCGAGG+TGG | 0.639335 | 4.1:+62769014 | None:intergenic |
| CAGTTGCGGTTGAACCGAGA+CGG | 0.640580 | 4.1:+62769006 | None:intergenic |
| GGTAATGTTGAAAGCTGAAG+TGG | 0.646946 | 4.1:+62767398 | None:intergenic |
| GCACTCCAAGGATTGAAATG+TGG | 0.649300 | 4.1:-62767905 | MS.gene72540:CDS |
| GATTCTGGCACTTCATCATG+GGG | 0.656651 | 4.1:+62764053 | None:intergenic |
| ATGATGGAAAACAGTCAACA+CGG | 0.661126 | 4.1:-62766081 | MS.gene72540:CDS |
| TCAGGATAGACAAACGTCAG+TGG | 0.663201 | 4.1:-62764821 | MS.gene72540:intron |
| ATGCTTAAAGAGCATTGTGA+CGG | 0.663771 | 4.1:-62764213 | MS.gene72540:CDS |
| GCGGTTGAACCGAGACGGCG+AGG | 0.666010 | 4.1:+62769011 | None:intergenic |
| TTCTGACTCCAATGCCACAG+TGG | 0.674350 | 4.1:-62764238 | MS.gene72540:CDS |
| TGATGGAAAACAGTCAACAC+GGG | 0.674513 | 4.1:-62766080 | MS.gene72540:CDS |
| CACTTTGTATCCAATCACAA+AGG | 0.679738 | 4.1:+62764018 | None:intergenic |
| ATCGTGTTTGAACCATACAA+TGG | 0.682012 | 4.1:+62768977 | None:intergenic |
| CAATTGAGTTGCCAACAAGG+TGG | 0.702074 | 4.1:+62765545 | None:intergenic |
| GAAAATTGGAAGCTGCAGTG+AGG | 0.709487 | 4.1:+62768928 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTAATTTTTTTTAAT+AGG | + | chr4.1:62764484-62764503 | None:intergenic | 0.0% |
| !! | ATGATATATAAACTTAAATT+TGG | - | chr4.1:62767558-62767577 | MS.gene72540:intron | 10.0% |
| !!! | AAAAGATCAATTTAAAATAA+AGG | + | chr4.1:62768974-62768993 | None:intergenic | 10.0% |
| !!! | TTTTTTATTTCATTTTGTTA+GGG | - | chr4.1:62768799-62768818 | MS.gene72540:intron | 10.0% |
| !! | AAAACTGTTAAATATAATCA+GGG | - | chr4.1:62764767-62764786 | MS.gene72540:CDS | 15.0% |
| !! | TAAAACTGTTAAATATAATC+AGG | - | chr4.1:62764766-62764785 | MS.gene72540:CDS | 15.0% |
| !! | TTAAAAATTCAAAGTAACAT+TGG | - | chr4.1:62764721-62764740 | MS.gene72540:intron | 15.0% |
| !! | TTAAAACAAATTCAATTCAT+CGG | - | chr4.1:62765028-62765047 | MS.gene72540:intron | 15.0% |
| !!! | AAGGAGTTAATTTAATTTTT+TGG | - | chr4.1:62766926-62766945 | MS.gene72540:intron | 15.0% |
| !!! | AGTTAATTTAATTTTTTGGT+TGG | - | chr4.1:62766930-62766949 | MS.gene72540:intron | 15.0% |
| !!! | GATTTTACAATATTAGAAAA+TGG | + | chr4.1:62767954-62767973 | None:intergenic | 15.0% |
| !!! | GTTTTTTATTTCATTTTGTT+AGG | - | chr4.1:62768798-62768817 | MS.gene72540:intron | 15.0% |
| !!! | TTCAATCAAATTAATCTTTT+TGG | - | chr4.1:62765369-62765388 | MS.gene72540:intron | 15.0% |
| !!! | TTTCAATTCAAAAAAGTATA+CGG | + | chr4.1:62768047-62768066 | None:intergenic | 15.0% |
| !! | AATATATTGAAAACAGCTTA+TGG | - | chr4.1:62764560-62764579 | MS.gene72540:intron | 20.0% |
| !! | AGAAATCAGATAAATAATGA+TGG | - | chr4.1:62766978-62766997 | MS.gene72540:CDS | 20.0% |
| !! | ATATAATGTACTAAATGCAT+TGG | - | chr4.1:62766087-62766106 | MS.gene72540:CDS | 20.0% |
| !! | ATCAATTAATTCTATCTTTC+TGG | + | chr4.1:62768739-62768758 | None:intergenic | 20.0% |
| !! | GCTAATTCTAACATATTTAT+TGG | - | chr4.1:62765248-62765267 | MS.gene72540:intron | 20.0% |
| !! | TAAATTATTTGTATTGCATC+AGG | - | chr4.1:62768515-62768534 | MS.gene72540:intron | 20.0% |
| !! | TACAATTTCAGATACTAAAT+TGG | + | chr4.1:62765283-62765302 | None:intergenic | 20.0% |
| !! | TCATAAGACTTAATATGTAA+AGG | + | chr4.1:62768578-62768597 | None:intergenic | 20.0% |
| !! | TTACAATATTAGAAAATGGA+GGG | + | chr4.1:62767950-62767969 | None:intergenic | 20.0% |
| !! | TTTACAATATTAGAAAATGG+AGG | + | chr4.1:62767951-62767970 | None:intergenic | 20.0% |
| !!! | AAACAAAAGTGCTAATTTAT+TGG | - | chr4.1:62767259-62767278 | MS.gene72540:intron | 20.0% |
| !!! | AAGAGATTTATTTTGTAGAA+AGG | + | chr4.1:62767588-62767607 | None:intergenic | 20.0% |
| !!! | AATTTAGTATCTGAAATTGT+AGG | - | chr4.1:62765282-62765301 | MS.gene72540:CDS | 20.0% |
| !!! | ATCAAATTAATCTTTTTGGT+TGG | - | chr4.1:62765373-62765392 | MS.gene72540:intron | 20.0% |
| !!! | TCAAATTAATCTTTTTGGTT+GGG | - | chr4.1:62765374-62765393 | MS.gene72540:intron | 20.0% |
| !!! | TCAATTTAAAATAAAGGCTA+AGG | + | chr4.1:62768968-62768987 | None:intergenic | 20.0% |
| !!! | TTGGAGTTTCATTAATTTTA+AGG | + | chr4.1:62765324-62765343 | None:intergenic | 20.0% |
| !!! | TTTGTTCTCTTTTTTATCAA+AGG | - | chr4.1:62766907-62766926 | MS.gene72540:intron | 20.0% |
| ! | AATCATCTCTTGATTTATGT+CGG | + | chr4.1:62765904-62765923 | None:intergenic | 25.0% |
| ! | AATTTCAGATACTAAATTGG+TGG | + | chr4.1:62765280-62765299 | None:intergenic | 25.0% |
| ! | ACAAAAATTACACTTACAGT+TGG | + | chr4.1:62768354-62768373 | None:intergenic | 25.0% |
| ! | ACAAATTGATCATGTCTTAT+TGG | - | chr4.1:62766833-62766852 | MS.gene72540:intron | 25.0% |
| ! | ACTAATTTGAACTTAACTAC+TGG | + | chr4.1:62764636-62764655 | None:intergenic | 25.0% |
| ! | AGAACAAAAAACAAAGATCA+AGG | + | chr4.1:62766895-62766914 | None:intergenic | 25.0% |
| ! | AGATTATAGAAGTAAACTAG+AGG | + | chr4.1:62768496-62768515 | None:intergenic | 25.0% |
| ! | AGTTCTTAACGTATTTCAAA+TGG | + | chr4.1:62767219-62767238 | None:intergenic | 25.0% |
| ! | ATAATTAAGGAATTAGATGC+TGG | - | chr4.1:62768889-62768908 | MS.gene72540:CDS | 25.0% |
| ! | ATACTGAATGATTAATTCTC+GGG | - | chr4.1:62768757-62768776 | MS.gene72540:CDS | 25.0% |
| ! | ATGTAACTTAATGACTTCAT+AGG | + | chr4.1:62766517-62766536 | None:intergenic | 25.0% |
| ! | ATGTTGTCTAATTAAATGTC+AGG | + | chr4.1:62768135-62768154 | None:intergenic | 25.0% |
| ! | CTATTTACATGTTAACTTTC+AGG | - | chr4.1:62768236-62768255 | MS.gene72540:intron | 25.0% |
| ! | GAATACATAAATTGGAACTA+GGG | + | chr4.1:62764176-62764195 | None:intergenic | 25.0% |
| ! | GATACTGAATGATTAATTCT+CGG | - | chr4.1:62768756-62768775 | MS.gene72540:CDS | 25.0% |
| ! | GGAAAAGATTCTAATTATAC+AGG | - | chr4.1:62768679-62768698 | MS.gene72540:intron | 25.0% |
| ! | GTAAAATCTTCAATAGAAGT+TGG | - | chr4.1:62767966-62767985 | MS.gene72540:CDS | 25.0% |
| ! | GTTCTTAACGTATTTCAAAT+GGG | + | chr4.1:62767218-62767237 | None:intergenic | 25.0% |
| ! | TACAATATTAGAAAATGGAG+GGG | + | chr4.1:62767949-62767968 | None:intergenic | 25.0% |
| ! | TACACATAGGGTAAATATTA+AGG | + | chr4.1:62768009-62768028 | None:intergenic | 25.0% |
| ! | TCTAATCTCATGATTAAGTT+TGG | - | chr4.1:62764357-62764376 | MS.gene72540:intron | 25.0% |
| ! | TGATAATTGTTCACTGAATT+AGG | - | chr4.1:62765833-62765852 | MS.gene72540:intron | 25.0% |
| ! | TGGTAAATTGATCTTAAAGT+TGG | - | chr4.1:62768093-62768112 | MS.gene72540:intron | 25.0% |
| ! | TTGTCTTATCTGTTATACAT+GGG | - | chr4.1:62766863-62766882 | MS.gene72540:intron | 25.0% |
| ! | TTTGTCTTATCTGTTATACA+TGG | - | chr4.1:62766862-62766881 | MS.gene72540:intron | 25.0% |
| !! | AACAATTATCACATGACTTT+TGG | + | chr4.1:62765824-62765843 | None:intergenic | 25.0% |
| !! | ACCTACATTTTCATCATAAA+AGG | + | chr4.1:62765203-62765222 | None:intergenic | 25.0% |
| !! | ATGATGACTTTAAGAAACTA+CGG | - | chr4.1:62765639-62765658 | MS.gene72540:CDS | 25.0% |
| !! | ATTATACAGGTATTGTAACA+TGG | - | chr4.1:62768692-62768711 | MS.gene72540:CDS | 25.0% |
| !! | CCTACATTTTCATCATAAAA+GGG | + | chr4.1:62765202-62765221 | None:intergenic | 25.0% |
| !! | TGATGATATAATGGGATTTA+TGG | - | chr4.1:62765871-62765890 | MS.gene72540:intron | 25.0% |
| !! | TGTTTTCAATATATTTCCAC+AGG | + | chr4.1:62764555-62764574 | None:intergenic | 25.0% |
| !! | TTTCTTTTGCTTAACATTAC+AGG | - | chr4.1:62768992-62769011 | MS.gene72540:CDS | 25.0% |
| !! | TTTTCTCTCTACAAGATTAT+TGG | - | chr4.1:62765772-62765791 | MS.gene72540:CDS | 25.0% |
| !! | TTTTGTCCTTGAAATTATAC+AGG | + | chr4.1:62765467-62765486 | None:intergenic | 25.0% |
| !!! | CTTAGTTTTATGGTAATGTT+TGG | - | chr4.1:62764420-62764439 | MS.gene72540:CDS | 25.0% |
| !!! | GAATTCTTTTGTTTTACTTG+AGG | - | chr4.1:62768295-62768314 | MS.gene72540:intron | 25.0% |
| !!! | TTACTTTTTTGGCAAATTTC+AGG | - | chr4.1:62766192-62766211 | MS.gene72540:intron | 25.0% |
| !!! | TTAGTTTTGTTTAACGAGAA+CGG | - | chr4.1:62766389-62766408 | MS.gene72540:CDS | 25.0% |
| !!! | TTGAAAGTAACATTTTAGCA+GGG | - | chr4.1:62769080-62769099 | MS.gene72540:CDS | 25.0% |
| AAGAAGATAGTTAAGAGGTA+TGG | + | chr4.1:62768648-62768667 | None:intergenic | 30.0% | |
| AATCAGGGAAATATGTGAAA+TGG | - | chr4.1:62764782-62764801 | MS.gene72540:CDS | 30.0% | |
| AATCATGTTGGTCATACATT+TGG | + | chr4.1:62767188-62767207 | None:intergenic | 30.0% | |
| ACAATAGCAACAATATAACC+TGG | + | chr4.1:62767715-62767734 | None:intergenic | 30.0% | |
| ACACAAAAAGGAAATGTTGT+TGG | - | chr4.1:62766055-62766074 | MS.gene72540:CDS | 30.0% | |
| AGATGATTGGAATTTGATCA+AGG | - | chr4.1:62765916-62765935 | MS.gene72540:intron | 30.0% | |
| AGCTCAGTATATACAATGTT+TGG | + | chr4.1:62767456-62767475 | None:intergenic | 30.0% | |
| ATCAGGGAAATATGTGAAAT+GGG | - | chr4.1:62764783-62764802 | MS.gene72540:CDS | 30.0% | |
| ATCATGTTGGTCATACATTT+GGG | + | chr4.1:62767187-62767206 | None:intergenic | 30.0% | |
| CCTGTGTATGATGATATAAT+GGG | - | chr4.1:62765863-62765882 | MS.gene72540:intron | 30.0% | |
| CGAATACATAAATTGGAACT+AGG | + | chr4.1:62764177-62764196 | None:intergenic | 30.0% | |
| GAAAATTAGAAGGAAAATGC+GGG | + | chr4.1:62764006-62764025 | None:intergenic | 30.0% | |
| GACATAAATCAAGAGATGAT+TGG | - | chr4.1:62765903-62765922 | MS.gene72540:intron | 30.0% | |
| GATACTTACTTGAAAGAATG+CGG | + | chr4.1:62764204-62764223 | None:intergenic | 30.0% | |
| GATCATTATCATTATCACAC+AGG | - | chr4.1:62765592-62765611 | MS.gene72540:CDS | 30.0% | |
| GCATCATTTATTGCACTATT+TGG | - | chr4.1:62766625-62766644 | MS.gene72540:intron | 30.0% | |
| GCTATTACATTGTTAGGATT+TGG | - | chr4.1:62767417-62767436 | MS.gene72540:CDS | 30.0% | |
| GCTGAAAGAACTAATACTTA+CGG | + | chr4.1:62764672-62764691 | None:intergenic | 30.0% | |
| GGAAAATTAGAAGGAAAATG+CGG | + | chr4.1:62764007-62764026 | None:intergenic | 30.0% | |
| GTAACAAACACAGATTCATT+TGG | + | chr4.1:62766037-62766056 | None:intergenic | 30.0% | |
| TACTATTGAGAGAAATGCTA+GGG | - | chr4.1:62767084-62767103 | MS.gene72540:CDS | 30.0% | |
| TCCTGTGTATGATGATATAA+TGG | - | chr4.1:62765862-62765881 | MS.gene72540:intron | 30.0% | |
| TCTTCAAGAAGATAGTTAAG+AGG | + | chr4.1:62768653-62768672 | None:intergenic | 30.0% | |
| TGAATACTATCCTTTGTGAT+TGG | - | chr4.1:62769047-62769066 | MS.gene72540:CDS | 30.0% | |
| TGATCAATCAAACATAACTG+AGG | + | chr4.1:62765577-62765596 | None:intergenic | 30.0% | |
| TTACTATTGAGAGAAATGCT+AGG | - | chr4.1:62767083-62767102 | MS.gene72540:CDS | 30.0% | |
| TTGTCCCAACAAATTTATGT+GGG | - | chr4.1:62767160-62767179 | MS.gene72540:CDS | 30.0% | |
| TTTGTCCCAACAAATTTATG+TGG | - | chr4.1:62767159-62767178 | MS.gene72540:CDS | 30.0% | |
| ! | AAAAAAGTATACGGTCAAGT+CGG | + | chr4.1:62768038-62768057 | None:intergenic | 30.0% |
| ! | AACATGGATTTGAAATGTTG+TGG | - | chr4.1:62768708-62768727 | MS.gene72540:CDS | 30.0% |
| ! | ACATGGATTTGAAATGTTGT+GGG | - | chr4.1:62768709-62768728 | MS.gene72540:CDS | 30.0% |
| ! | AGGTTATATTGTTGCTATTG+TGG | - | chr4.1:62767714-62767733 | MS.gene72540:intron | 30.0% |
| ! | CATATTAAGTCTTATGATCC+TGG | - | chr4.1:62768581-62768600 | MS.gene72540:intron | 30.0% |
| ! | CCCTTTTATGATGAAAATGT+AGG | - | chr4.1:62765199-62765218 | MS.gene72540:intron | 30.0% |
| ! | TCTGTGTTTGTTACACAAAA+AGG | - | chr4.1:62766043-62766062 | MS.gene72540:intron | 30.0% |
| ! | TTGATCATGTCTTATTGGTT+TGG | - | chr4.1:62766838-62766857 | MS.gene72540:intron | 30.0% |
| ! | TTTTCTCAGTATACAATTGC+CGG | - | chr4.1:62767291-62767310 | MS.gene72540:intron | 30.0% |
| !! | GTTGAAAGTAACATTTTAGC+AGG | - | chr4.1:62769079-62769098 | MS.gene72540:CDS | 30.0% |
| !! | TGTTCAGGTATTGAATTGAT+TGG | - | chr4.1:62767040-62767059 | MS.gene72540:CDS | 30.0% |
| !! | TTGTGACGGTGTTATAATTA+AGG | - | chr4.1:62768876-62768895 | MS.gene72540:intron | 30.0% |
| !!! | AGCAAATTGTTGTTTTTCAG+AGG | + | chr4.1:62767905-62767924 | None:intergenic | 30.0% |
| !!! | CTAAGAGTCTGTTACTTTTT+TGG | - | chr4.1:62766181-62766200 | MS.gene72540:intron | 30.0% |
| !!! | TACTCAGGTACTTAGTTTTA+TGG | - | chr4.1:62764410-62764429 | MS.gene72540:CDS | 30.0% |
| !!! | TTAATTTTTTGGTTGGCTAG+TGG | - | chr4.1:62766937-62766956 | MS.gene72540:intron | 30.0% |
| AAATTCAATTCATCGGTCTC+AGG | - | chr4.1:62765035-62765054 | MS.gene72540:intron | 35.0% | |
| ACTTCATTGTTGATGTTGTG+CGG | - | chr4.1:62767499-62767518 | MS.gene72540:intron | 35.0% | |
| ACTTTAAACCGTCATTGAGA+AGG | - | chr4.1:62764880-62764899 | MS.gene72540:intron | 35.0% | |
| AGAAAATGGAGGGGTTAAAA+TGG | + | chr4.1:62767940-62767959 | None:intergenic | 35.0% | |
| AGAATGTCAAACTTGTGTCA+TGG | - | chr4.1:62765533-62765552 | MS.gene72540:intron | 35.0% | |
| AGCACTGTTTATCAAGACAA+TGG | + | chr4.1:62767767-62767786 | None:intergenic | 35.0% | |
| AGTAACAGACTCTTAGAAAG+AGG | + | chr4.1:62766177-62766196 | None:intergenic | 35.0% | |
| ATCAAAACATCAACAGAAGC+AGG | + | chr4.1:62767667-62767686 | None:intergenic | 35.0% | |
| ATCGTGTTTGAACCATACAA+TGG | + | chr4.1:62764101-62764120 | None:intergenic | 35.0% | |
| ATGAGAAAGAACGAAATGCA+GGG | - | chr4.1:62766707-62766726 | MS.gene72540:intron | 35.0% | |
| ATTGTCTTGATAAACAGTGC+TGG | - | chr4.1:62767766-62767785 | MS.gene72540:intron | 35.0% | |
| CAAAAAGGAAATGTTGTTGG+AGG | - | chr4.1:62766058-62766077 | MS.gene72540:CDS | 35.0% | |
| CAAAGCTACTTGTGTATTTG+CGG | - | chr4.1:62765069-62765088 | MS.gene72540:intron | 35.0% | |
| CAACAATATAACCTGGAGTA+GGG | + | chr4.1:62767708-62767727 | None:intergenic | 35.0% | |
| CACTTTGTATCCAATCACAA+AGG | + | chr4.1:62769060-62769079 | None:intergenic | 35.0% | |
| CCCATTATATCATCATACAC+AGG | + | chr4.1:62765866-62765885 | None:intergenic | 35.0% | |
| CGGTGATCGAATACATAAAT+TGG | + | chr4.1:62764184-62764203 | None:intergenic | 35.0% | |
| CTATCTTCTTGAAGATGTCA+AGG | - | chr4.1:62768658-62768677 | MS.gene72540:intron | 35.0% | |
| GAAAGTGAGGGAAAATTAGA+AGG | + | chr4.1:62764016-62764035 | None:intergenic | 35.0% | |
| GATTTGAGGAATTCGTTGAA+AGG | - | chr4.1:62764327-62764346 | MS.gene72540:intron | 35.0% | |
| GGATATGTTGATGCACTTTA+CGG | - | chr4.1:62765793-62765812 | MS.gene72540:intron | 35.0% | |
| GTAACAGACTCTTAGAAAGA+GGG | + | chr4.1:62766176-62766195 | None:intergenic | 35.0% | |
| GTATGACCAACATGATTTAG+TGG | - | chr4.1:62767191-62767210 | MS.gene72540:CDS | 35.0% | |
| GTCCTTGAAATTATACAGGT+CGG | + | chr4.1:62765463-62765482 | None:intergenic | 35.0% | |
| GTTTCTCCGTATCATTAGAA+GGG | - | chr4.1:62766332-62766351 | MS.gene72540:CDS | 35.0% | |
| GTTTGGGCTATTACATTGTT+AGG | - | chr4.1:62767411-62767430 | MS.gene72540:CDS | 35.0% | |
| TAAAGCTAAAGATGCTTTCC+AGG | + | chr4.1:62768619-62768638 | None:intergenic | 35.0% | |
| TACTCATTGAATCCAAGTGT+TGG | - | chr4.1:62764236-62764255 | MS.gene72540:CDS | 35.0% | |
| TATGAGAAAGAACGAAATGC+AGG | - | chr4.1:62766706-62766725 | MS.gene72540:intron | 35.0% | |
| TGGAACTAGGGATTGAAAAT+TGG | + | chr4.1:62764164-62764183 | None:intergenic | 35.0% | |
| TGTATATACTGAGCTCTTGT+GGG | - | chr4.1:62767461-62767480 | MS.gene72540:CDS | 35.0% | |
| TGTATGCCCTTCTAATGATA+CGG | + | chr4.1:62766341-62766360 | None:intergenic | 35.0% | |
| TGTTTCTCCGTATCATTAGA+AGG | - | chr4.1:62766331-62766350 | MS.gene72540:CDS | 35.0% | |
| TTGTATATACTGAGCTCTTG+TGG | - | chr4.1:62767460-62767479 | MS.gene72540:CDS | 35.0% | |
| TTGTCTTGATAAACAGTGCT+GGG | - | chr4.1:62767767-62767786 | MS.gene72540:intron | 35.0% | |
| ! | ACCAGCATATTATGCACTTT+TGG | + | chr4.1:62768077-62768096 | None:intergenic | 35.0% |
| ! | ATGATGGAAAACAGTCAACA+CGG | - | chr4.1:62766994-62767013 | MS.gene72540:CDS | 35.0% |
| ! | CACTCTCATTTTCATTTGCT+TGG | - | chr4.1:62765494-62765513 | MS.gene72540:intron | 35.0% |
| ! | CCAGCATATTATGCACTTTT+GGG | + | chr4.1:62768076-62768095 | None:intergenic | 35.0% |
| ! | CTTACACTTGGATTAGACAA+TGG | + | chr4.1:62767820-62767839 | None:intergenic | 35.0% |
| ! | GCATATTTGAGGTATTTGGA+GGG | - | chr4.1:62766112-62766131 | MS.gene72540:CDS | 35.0% |
| ! | GTTCTTCTTGTACATGGTTT+TGG | - | chr4.1:62767330-62767349 | MS.gene72540:intron | 35.0% |
| ! | TAAATACTTTTCCCTACTCC+AGG | - | chr4.1:62767694-62767713 | MS.gene72540:intron | 35.0% |
| ! | TGCATATTTGAGGTATTTGG+AGG | - | chr4.1:62766111-62766130 | MS.gene72540:CDS | 35.0% |
| !! | AGGATAGTATTCACTGATTC+TGG | + | chr4.1:62769040-62769059 | None:intergenic | 35.0% |
| !! | ATGCTTAAAGAGCATTGTGA+CGG | - | chr4.1:62768862-62768881 | MS.gene72540:intron | 35.0% |
| !! | TCTTTTTGCATTGACATCGA+CGG | - | chr4.1:62768388-62768407 | MS.gene72540:intron | 35.0% |
| !!! | TACATGGTTTTGGTGCATTT+GGG | - | chr4.1:62767340-62767359 | MS.gene72540:intron | 35.0% |
| !!! | TGTTGATGGCTTTTCTTATC+AGG | - | chr4.1:62765733-62765752 | MS.gene72540:CDS | 35.0% |
| AAACCGTCATTGAGAAGGAA+AGG | - | chr4.1:62764885-62764904 | MS.gene72540:intron | 40.0% | |
| AAAGGAAATGTTGTTGGAGG+TGG | - | chr4.1:62766061-62766080 | MS.gene72540:CDS | 40.0% | |
| AAATCGATCAAGGTTCCACA+AGG | - | chr4.1:62765148-62765167 | MS.gene72540:intron | 40.0% | |
| AACATTACCTGGTGCAGAAA+TGG | - | chr4.1:62765691-62765710 | MS.gene72540:CDS | 40.0% | |
| AAGTCGGTCATGATACACAT+AGG | + | chr4.1:62768022-62768041 | None:intergenic | 40.0% | |
| ACATCAGCTGAAACCTTGTT+AGG | - | chr4.1:62765941-62765960 | MS.gene72540:intron | 40.0% | |
| AGTCGGTCATGATACACATA+GGG | + | chr4.1:62768021-62768040 | None:intergenic | 40.0% | |
| ATAATTCCCAAAGATAGCGC+AGG | + | chr4.1:62766652-62766671 | None:intergenic | 40.0% | |
| ATGGGTCCACTAAATCATGT+TGG | + | chr4.1:62767200-62767219 | None:intergenic | 40.0% | |
| ATGTCAAACTTGTGTCATGG+TGG | - | chr4.1:62765536-62765555 | MS.gene72540:intron | 40.0% | |
| CCAAACTGTGTATGTTGTCA+CGG | + | chr4.1:62767374-62767393 | None:intergenic | 40.0% | |
| CCTTGCCTTAAATTTGTGCA+GGG | - | chr4.1:62766564-62766583 | MS.gene72540:intron | 40.0% | |
| CTCAACACATTGCAATCCAT+TGG | - | chr4.1:62764944-62764963 | MS.gene72540:intron | 40.0% | |
| CTTCAGCTTTCAACATTACC+TGG | - | chr4.1:62765680-62765699 | MS.gene72540:CDS | 40.0% | |
| CTTCATTGTTGATGTTGTGC+GGG | - | chr4.1:62767500-62767519 | MS.gene72540:intron | 40.0% | |
| GACCGACCTGTATAATTTCA+AGG | - | chr4.1:62765458-62765477 | MS.gene72540:intron | 40.0% | |
| GCAACAATATAACCTGGAGT+AGG | + | chr4.1:62767709-62767728 | None:intergenic | 40.0% | |
| GCTGAAATCTAGTGAGAACA+GGG | - | chr4.1:62765973-62765992 | MS.gene72540:intron | 40.0% | |
| GGTAATGTTGAAAGCTGAAG+TGG | + | chr4.1:62765680-62765699 | None:intergenic | 40.0% | |
| GTATGAGCTCTGCTTTATCA+TGG | - | chr4.1:62765105-62765124 | MS.gene72540:intron | 40.0% | |
| GTCTTCCACATTTCAATCCT+TGG | + | chr4.1:62765178-62765197 | None:intergenic | 40.0% | |
| GTGTACCCTGCACAAATTTA+AGG | + | chr4.1:62766572-62766591 | None:intergenic | 40.0% | |
| TAGAGCTGGAAATCGAGTTT+GGG | - | chr4.1:62767395-62767414 | MS.gene72540:CDS | 40.0% | |
| TAGAGTCAGTTTCCAACACT+TGG | + | chr4.1:62764251-62764270 | None:intergenic | 40.0% | |
| TATACAATTGCCGGTGAAGA+TGG | - | chr4.1:62767300-62767319 | MS.gene72540:intron | 40.0% | |
| TGAAAATGTAGGTAGCTCGT+TGG | - | chr4.1:62765210-62765229 | MS.gene72540:intron | 40.0% | |
| TGATGGAAAACAGTCAACAC+GGG | - | chr4.1:62766995-62767014 | MS.gene72540:CDS | 40.0% | |
| TGATTCTGGCACTTCATCAT+GGG | + | chr4.1:62769026-62769045 | None:intergenic | 40.0% | |
| TGCAGAAATGGAACTGGATT+GGG | - | chr4.1:62765703-62765722 | MS.gene72540:CDS | 40.0% | |
| TGCTGAAATCTAGTGAGAAC+AGG | - | chr4.1:62765972-62765991 | MS.gene72540:intron | 40.0% | |
| TGCTTTGCAGAAGATCGAAA+GGG | - | chr4.1:62768431-62768450 | MS.gene72540:intron | 40.0% | |
| TGGGTCCCACATAAATTTGT+TGG | + | chr4.1:62767168-62767187 | None:intergenic | 40.0% | |
| TTAGCAGGGTTCCAAGTATA+GGG | - | chr4.1:62769094-62769113 | MS.gene72540:CDS | 40.0% | |
| TTCTCAGATAGTCTCACAAG+TGG | - | chr4.1:62764605-62764624 | MS.gene72540:intron | 40.0% | |
| TTCTGATGAAATGCTGGAAC+TGG | - | chr4.1:62764287-62764306 | MS.gene72540:intron | 40.0% | |
| TTGTGTATTTGCGGAACAAG+AGG | - | chr4.1:62765078-62765097 | MS.gene72540:intron | 40.0% | |
| TTTAGCAGGGTTCCAAGTAT+AGG | - | chr4.1:62769093-62769112 | MS.gene72540:CDS | 40.0% | |
| ! | AGGGTTTTCTGATGAAATGC+TGG | - | chr4.1:62764281-62764300 | MS.gene72540:intron | 40.0% |
| ! | CCATCGTTTGAAATCGATCA+AGG | - | chr4.1:62765138-62765157 | MS.gene72540:intron | 40.0% |
| ! | CCCAAAAGTGCATAATATGC+TGG | - | chr4.1:62768073-62768092 | MS.gene72540:intron | 40.0% |
| ! | CCTTGATCGATTTCAAACGA+TGG | + | chr4.1:62765141-62765160 | None:intergenic | 40.0% |
| ! | CTGGAATGGTTTTCTTGTTC+AGG | - | chr4.1:62767025-62767044 | MS.gene72540:CDS | 40.0% |
| ! | GCATATTATGCACTTTTGGG+TGG | + | chr4.1:62768073-62768092 | None:intergenic | 40.0% |
| ! | GGCTGCATATTTGAGGTATT+TGG | - | chr4.1:62766108-62766127 | MS.gene72540:CDS | 40.0% |
| ! | GGGTCCCACATAAATTTGTT+GGG | + | chr4.1:62767167-62767186 | None:intergenic | 40.0% |
| ! | TTTGAGGTATTTGGAGGGAA+CGG | - | chr4.1:62766117-62766136 | MS.gene72540:CDS | 40.0% |
| !! | ATGCATTGGCTGCATATTTG+AGG | - | chr4.1:62766101-62766120 | MS.gene72540:CDS | 40.0% |
| !! | ATGGGTATTAAGAGTGTCAC+AGG | - | chr4.1:62764801-62764820 | MS.gene72540:CDS | 40.0% |
| !! | GATTGGGGTTAGTTTGTTGA+TGG | - | chr4.1:62765719-62765738 | MS.gene72540:CDS | 40.0% |
| !! | TGTTTGCTGTTCGAGATTTG+AGG | - | chr4.1:62764313-62764332 | MS.gene72540:intron | 40.0% |
| !! | TTTTGGTTGGCTAGTGGTAT+TGG | - | chr4.1:62766943-62766962 | MS.gene72540:CDS | 40.0% |
| !!! | ACATGGTTTTGGTGCATTTG+GGG | - | chr4.1:62767341-62767360 | MS.gene72540:intron | 40.0% |
| !!! | GTACATGGTTTTGGTGCATT+TGG | - | chr4.1:62767339-62767358 | MS.gene72540:intron | 40.0% |
| AAGCTATCATGAAGAGCCTG+TGG | - | chr4.1:62764536-62764555 | MS.gene72540:intron | 45.0% | |
| AAGGAAAATGCGGGAAAGTG+AGG | + | chr4.1:62763997-62764016 | None:intergenic | 45.0% | |
| ACGTTCGTACTACACTAGCA+AGG | - | chr4.1:62767849-62767868 | MS.gene72540:intron | 45.0% | |
| AGATCGAAAGGGCAGATGAT+TGG | - | chr4.1:62768442-62768461 | MS.gene72540:intron | 45.0% | |
| AGGAATTCGTTGAAAGGTCG+TGG | - | chr4.1:62764333-62764352 | MS.gene72540:intron | 45.0% | |
| ATACACAGTTTGGCTAGAGC+TGG | - | chr4.1:62767381-62767400 | MS.gene72540:CDS | 45.0% | |
| ATTTGGTCCTGCGCTATCTT+TGG | - | chr4.1:62766642-62766661 | MS.gene72540:intron | 45.0% | |
| CACACAGGTTCTGCAAAATC+TGG | - | chr4.1:62765607-62765626 | MS.gene72540:CDS | 45.0% | |
| CACCTTGTTGGCAACTCAAT+TGG | - | chr4.1:62767531-62767550 | MS.gene72540:intron | 45.0% | |
| CAGCATTTCTCTGCCTAACA+AGG | + | chr4.1:62765957-62765976 | None:intergenic | 45.0% | |
| CCATGTACAAGAAGAACAGC+AGG | + | chr4.1:62767327-62767346 | None:intergenic | 45.0% | |
| CCGTGACAACATACACAGTT+TGG | - | chr4.1:62767371-62767390 | MS.gene72540:intron | 45.0% | |
| CCTGCTGTTCTTCTTGTACA+TGG | - | chr4.1:62767324-62767343 | MS.gene72540:intron | 45.0% | |
| CGTGCTTCAGAAAGTCGAAA+TGG | - | chr4.1:62766601-62766620 | MS.gene72540:intron | 45.0% | |
| CTAGAGCTGGAAATCGAGTT+TGG | - | chr4.1:62767394-62767413 | MS.gene72540:CDS | 45.0% | |
| CTCTTTAAGCATAGCCACTG+TGG | + | chr4.1:62768854-62768873 | None:intergenic | 45.0% | |
| CTGACTCTATTTGCTCTGCA+GGG | - | chr4.1:62764262-62764281 | MS.gene72540:intron | 45.0% | |
| CTGATTCTGGCACTTCATCA+TGG | + | chr4.1:62769027-62769046 | None:intergenic | 45.0% | |
| CTGGTGAGAAAATTGTGTGC+TGG | + | chr4.1:62767638-62767657 | None:intergenic | 45.0% | |
| CTTGTTGGCAACTCAATTGG+TGG | - | chr4.1:62767534-62767553 | MS.gene72540:intron | 45.0% | |
| GAAAACAGTCAACACGGGTA+TGG | - | chr4.1:62767000-62767019 | MS.gene72540:CDS | 45.0% | |
| GAAAATTGGAAGCTGCAGTG+AGG | + | chr4.1:62764150-62764169 | None:intergenic | 45.0% | |
| GAAAGGCGGTAGTAGTTTCT+TGG | - | chr4.1:62764902-62764921 | MS.gene72540:intron | 45.0% | |
| GATTCTGGCACTTCATCATG+GGG | + | chr4.1:62769025-62769044 | None:intergenic | 45.0% | |
| GCACTCCAAGGATTGAAATG+TGG | - | chr4.1:62765170-62765189 | MS.gene72540:intron | 45.0% | |
| GCAGAAATGGAACTGGATTG+GGG | - | chr4.1:62765704-62765723 | MS.gene72540:CDS | 45.0% | |
| GCCTTGCCTTAAATTTGTGC+AGG | - | chr4.1:62766563-62766582 | MS.gene72540:intron | 45.0% | |
| GTGCAGAAATGGAACTGGAT+TGG | - | chr4.1:62765702-62765721 | MS.gene72540:CDS | 45.0% | |
| GTGCTTTGCAGAAGATCGAA+AGG | - | chr4.1:62768430-62768449 | MS.gene72540:intron | 45.0% | |
| GTGGCAGCTGAATATCCAAA+GGG | + | chr4.1:62766742-62766761 | None:intergenic | 45.0% | |
| TAAGTACCTGAGTAGCAAGC+TGG | + | chr4.1:62764404-62764423 | None:intergenic | 45.0% | |
| TCAAACTTGTGTCATGGTGG+TGG | - | chr4.1:62765539-62765558 | MS.gene72540:intron | 45.0% | |
| TCAATTCATCGGTCTCAGGA+TGG | - | chr4.1:62765039-62765058 | MS.gene72540:intron | 45.0% | |
| TCACAAACATGCAGCGACTT+TGG | - | chr4.1:62767610-62767629 | MS.gene72540:intron | 45.0% | |
| TCAGGATAGACAAACGTCAG+TGG | - | chr4.1:62768254-62768273 | MS.gene72540:intron | 45.0% | |
| TGTATTTGCGGAACAAGAGG+TGG | - | chr4.1:62765081-62765100 | MS.gene72540:intron | 45.0% | |
| TTCAGAGGCAGCAAAAGAAG+AGG | + | chr4.1:62767890-62767909 | None:intergenic | 45.0% | |
| TTTGGTCCTGCGCTATCTTT+GGG | - | chr4.1:62766643-62766662 | MS.gene72540:intron | 45.0% | |
| ! | ACTGACTCTATTTGCTCTGC+AGG | - | chr4.1:62764261-62764280 | MS.gene72540:intron | 45.0% |
| ! | CAATTGAGTTGCCAACAAGG+TGG | + | chr4.1:62767533-62767552 | None:intergenic | 45.0% |
| ! | CACCAATTGAGTTGCCAACA+AGG | + | chr4.1:62767536-62767555 | None:intergenic | 45.0% |
| ! | CCCTGCACAAATTTAAGGCA+AGG | + | chr4.1:62766567-62766586 | None:intergenic | 45.0% |
| ! | CGTCAGTTGTCACTTACACT+TGG | + | chr4.1:62767832-62767851 | None:intergenic | 45.0% |
| ! | GTGGCATTGGAGTCAGAAAT+TGG | + | chr4.1:62768835-62768854 | None:intergenic | 45.0% |
| ! | TTGCTATTGTGGCTCGAGTT+TGG | - | chr4.1:62767725-62767744 | MS.gene72540:intron | 45.0% |
| !!! | TGGCTAGTGGTATTGGCTTT+TGG | - | chr4.1:62766950-62766969 | MS.gene72540:CDS | 45.0% |
| !!! | TTTTATTTAATGAATTATTT+TGG | + | chr4.1:62765343-62765362 | None:intergenic | 5.0% |
| AACAGCAGGACCATCTTCAC+CGG | + | chr4.1:62767313-62767332 | None:intergenic | 50.0% | |
| AAGATGCTTTCCAGGACCAC+AGG | + | chr4.1:62768611-62768630 | None:intergenic | 50.0% | |
| AAGCATAGCCACTGTGGCAT+TGG | + | chr4.1:62768848-62768867 | None:intergenic | 50.0% | |
| ACCTGGTGCAGAAATGGAAC+TGG | - | chr4.1:62765697-62765716 | MS.gene72540:CDS | 50.0% | |
| AGAAGCGGTTGTTAGGGAAG+CGG | + | chr4.1:62764039-62764058 | None:intergenic | 50.0% | |
| AGTTGAGGCTGTGTGTTCGA+AGG | - | chr4.1:62766774-62766793 | MS.gene72540:intron | 50.0% | |
| ATCGACGGTGCTTGATTCTG+TGG | - | chr4.1:62768403-62768422 | MS.gene72540:intron | 50.0% | |
| CAACAGAAGCAGGAACAAGC+TGG | + | chr4.1:62767657-62767676 | None:intergenic | 50.0% | |
| CAACTGACACGGCCATTGTA+TGG | - | chr4.1:62764086-62764105 | MS.gene72540:intron | 50.0% | |
| CCGCCTTTCCTTCTCAATGA+CGG | + | chr4.1:62764891-62764910 | None:intergenic | 50.0% | |
| CCGTCATTGAGAAGGAAAGG+CGG | - | chr4.1:62764888-62764907 | MS.gene72540:intron | 50.0% | |
| CGTACTACACTAGCAAGGCA+TGG | - | chr4.1:62767854-62767873 | MS.gene72540:intron | 50.0% | |
| GCACTTCATCATGGGGACAA+TGG | + | chr4.1:62769018-62769037 | None:intergenic | 50.0% | |
| GCAGGGTTCTTATCTCCCTT+TGG | - | chr4.1:62766724-62766743 | MS.gene72540:intron | 50.0% | |
| GCTGAAGTGGTGTAGTCACA+TGG | + | chr4.1:62765667-62765686 | None:intergenic | 50.0% | |
| GGTGGCAGCTGAATATCCAA+AGG | + | chr4.1:62766743-62766762 | None:intergenic | 50.0% | |
| GTGGAGAGAAGCGGTTGTTA+GGG | + | chr4.1:62764045-62764064 | None:intergenic | 50.0% | |
| TACAATGGCCGTGTCAGTTG+CGG | + | chr4.1:62764086-62764105 | None:intergenic | 50.0% | |
| TCCAGTTCCATTTCTGCACC+AGG | + | chr4.1:62765701-62765720 | None:intergenic | 50.0% | |
| TGCAATCCATTGGTGCGTGA+GGG | - | chr4.1:62764954-62764973 | MS.gene72540:intron | 50.0% | |
| TGTTGATGTTGTGCGGGAAC+CGG | - | chr4.1:62767506-62767525 | MS.gene72540:intron | 50.0% | |
| TTAGGGAAGCGGGAAAGTGA+GGG | + | chr4.1:62764028-62764047 | None:intergenic | 50.0% | |
| TTATGATCCTGGTGTGCCTG+TGG | - | chr4.1:62768592-62768611 | MS.gene72540:intron | 50.0% | |
| TTCTGACTCCAATGCCACAG+TGG | - | chr4.1:62768837-62768856 | MS.gene72540:intron | 50.0% | |
| TTGCAATCCATTGGTGCGTG+AGG | - | chr4.1:62764953-62764972 | MS.gene72540:intron | 50.0% | |
| ! | TCAATCCTTGGAGTGCCTTG+TGG | + | chr4.1:62765166-62765185 | None:intergenic | 50.0% |
| !! | GATACACCAGCTTGCTACTC+AGG | - | chr4.1:62764395-62764414 | MS.gene72540:intron | 50.0% |
| AAGCTGCAGTGAGGAGTCCA+GGG | + | chr4.1:62764141-62764160 | None:intergenic | 55.0% | |
| ACACGGGTATGGAGCTGGAA+TGG | - | chr4.1:62767011-62767030 | MS.gene72540:CDS | 55.0% | |
| AGCCTCAACTGCTGCTGCAA+TGG | + | chr4.1:62766764-62766783 | None:intergenic | 55.0% | |
| AGGGAACGGCTCGTGATGAT+TGG | - | chr4.1:62766131-62766150 | MS.gene72540:intron | 55.0% | |
| AGTCAACACGGGTATGGAGC+TGG | - | chr4.1:62767006-62767025 | MS.gene72540:CDS | 55.0% | |
| CACCATTGCAGCAGCAGTTG+AGG | - | chr4.1:62766759-62766778 | MS.gene72540:intron | 55.0% | |
| CAGTTGCGGTTGAACCGAGA+CGG | + | chr4.1:62764072-62764091 | None:intergenic | 55.0% | |
| CATCGGTCTCAGGATGGAAC+AGG | - | chr4.1:62765045-62765064 | MS.gene72540:intron | 55.0% | |
| CGGTTCAACCGCAACTGACA+CGG | - | chr4.1:62764075-62764094 | MS.gene72540:intron | 55.0% | |
| CTCAACTGCTGCTGCAATGG+TGG | + | chr4.1:62766761-62766780 | None:intergenic | 55.0% | |
| GAAGCGGTTGTTAGGGAAGC+GGG | + | chr4.1:62764038-62764057 | None:intergenic | 55.0% | |
| GAGTTGCCAACAAGGTGGAC+CGG | + | chr4.1:62767528-62767547 | None:intergenic | 55.0% | |
| GGTGGAGAGAAGCGGTTGTT+AGG | + | chr4.1:62764046-62764065 | None:intergenic | 55.0% | |
| GTCCAGGGTGATCGTCTGTT+CGG | + | chr4.1:62764126-62764145 | None:intergenic | 55.0% | |
| GTTAGGGAAGCGGGAAAGTG+AGG | + | chr4.1:62764029-62764048 | None:intergenic | 55.0% | |
| TGAGGCTGTGTGTTCGAAGG+AGG | - | chr4.1:62766777-62766796 | MS.gene72540:intron | 55.0% | |
| ! | AGGTTCCACAAGGCACTCCA+AGG | - | chr4.1:62765158-62765177 | MS.gene72540:intron | 55.0% |
| CATTGGTGCGTGAGGGTGAG+AGG | - | chr4.1:62764961-62764980 | MS.gene72540:intron | 60.0% | |
| CTCCGAACAGACGATCACCC+TGG | - | chr4.1:62764121-62764140 | MS.gene72540:intron | 60.0% | |
| CTCTCACCCTCACGCACCAA+TGG | + | chr4.1:62764963-62764982 | None:intergenic | 60.0% | |
| GAAGCTGCAGTGAGGAGTCC+AGG | + | chr4.1:62764142-62764161 | None:intergenic | 60.0% | |
| TTCTCTCCACCTCGCCGTCT+CGG | - | chr4.1:62764055-62764074 | MS.gene72540:CDS | 60.0% | |
| CGGGAACCGGTCCACCTTGT+TGG | - | chr4.1:62767519-62767538 | MS.gene72540:intron | 65.0% | |
| GACGGCGAGGTGGAGAGAAG+CGG | + | chr4.1:62764054-62764073 | None:intergenic | 65.0% | |
| GTTGAACCGAGACGGCGAGG+TGG | + | chr4.1:62764064-62764083 | None:intergenic | 65.0% | |
| TCCAGGACCACAGGCACACC+AGG | + | chr4.1:62768602-62768621 | None:intergenic | 65.0% | |
| TCCTGGTGTGCCTGTGGTCC+TGG | - | chr4.1:62768598-62768617 | MS.gene72540:intron | 65.0% | |
| GCGGTTGAACCGAGACGGCG+AGG | + | chr4.1:62764067-62764086 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 62763983 | 62769114 | 62763983 | ID=MS.gene72540 |
| chr4.1 | mRNA | 62763983 | 62769114 | 62763983 | ID=MS.gene72540.t1;Parent=MS.gene72540 |
| chr4.1 | exon | 62768883 | 62769114 | 62768883 | ID=MS.gene72540.t1.exon1;Parent=MS.gene72540.t1 |
| chr4.1 | CDS | 62768883 | 62769114 | 62768883 | ID=cds.MS.gene72540.t1;Parent=MS.gene72540.t1 |
| chr4.1 | exon | 62768681 | 62768814 | 62768681 | ID=MS.gene72540.t1.exon2;Parent=MS.gene72540.t1 |
| chr4.1 | CDS | 62768681 | 62768814 | 62768681 | ID=cds.MS.gene72540.t1;Parent=MS.gene72540.t1 |
| chr4.1 | exon | 62767881 | 62768030 | 62767881 | ID=MS.gene72540.t1.exon3;Parent=MS.gene72540.t1 |
| chr4.1 | CDS | 62767881 | 62768030 | 62767881 | ID=cds.MS.gene72540.t1;Parent=MS.gene72540.t1 |
| chr4.1 | exon | 62767372 | 62767483 | 62767372 | ID=MS.gene72540.t1.exon4;Parent=MS.gene72540.t1 |
| chr4.1 | CDS | 62767372 | 62767483 | 62767372 | ID=cds.MS.gene72540.t1;Parent=MS.gene72540.t1 |
| chr4.1 | exon | 62766939 | 62767242 | 62766939 | ID=MS.gene72540.t1.exon5;Parent=MS.gene72540.t1 |
| chr4.1 | CDS | 62766939 | 62767242 | 62766939 | ID=cds.MS.gene72540.t1;Parent=MS.gene72540.t1 |
| chr4.1 | exon | 62766299 | 62766512 | 62766299 | ID=MS.gene72540.t1.exon6;Parent=MS.gene72540.t1 |
| chr4.1 | CDS | 62766299 | 62766512 | 62766299 | ID=cds.MS.gene72540.t1;Parent=MS.gene72540.t1 |
| chr4.1 | exon | 62766051 | 62766140 | 62766051 | ID=MS.gene72540.t1.exon7;Parent=MS.gene72540.t1 |
| chr4.1 | CDS | 62766051 | 62766140 | 62766051 | ID=cds.MS.gene72540.t1;Parent=MS.gene72540.t1 |
| chr4.1 | exon | 62765542 | 62765797 | 62765542 | ID=MS.gene72540.t1.exon8;Parent=MS.gene72540.t1 |
| chr4.1 | CDS | 62765542 | 62765797 | 62765542 | ID=cds.MS.gene72540.t1;Parent=MS.gene72540.t1 |
| chr4.1 | exon | 62765263 | 62765381 | 62765263 | ID=MS.gene72540.t1.exon9;Parent=MS.gene72540.t1 |
| chr4.1 | CDS | 62765263 | 62765381 | 62765263 | ID=cds.MS.gene72540.t1;Parent=MS.gene72540.t1 |
| chr4.1 | exon | 62764741 | 62764839 | 62764741 | ID=MS.gene72540.t1.exon10;Parent=MS.gene72540.t1 |
| chr4.1 | CDS | 62764741 | 62764839 | 62764741 | ID=cds.MS.gene72540.t1;Parent=MS.gene72540.t1 |
| chr4.1 | exon | 62764609 | 62764656 | 62764609 | ID=MS.gene72540.t1.exon11;Parent=MS.gene72540.t1 |
| chr4.1 | CDS | 62764609 | 62764656 | 62764609 | ID=cds.MS.gene72540.t1;Parent=MS.gene72540.t1 |
| chr4.1 | exon | 62764397 | 62764507 | 62764397 | ID=MS.gene72540.t1.exon12;Parent=MS.gene72540.t1 |
| chr4.1 | CDS | 62764397 | 62764507 | 62764397 | ID=cds.MS.gene72540.t1;Parent=MS.gene72540.t1 |
| chr4.1 | exon | 62764187 | 62764277 | 62764187 | ID=MS.gene72540.t1.exon13;Parent=MS.gene72540.t1 |
| chr4.1 | CDS | 62764187 | 62764277 | 62764187 | ID=cds.MS.gene72540.t1;Parent=MS.gene72540.t1 |
| chr4.1 | exon | 62763983 | 62764083 | 62763983 | ID=MS.gene72540.t1.exon14;Parent=MS.gene72540.t1 |
| chr4.1 | CDS | 62763983 | 62764083 | 62763983 | ID=cds.MS.gene72540.t1;Parent=MS.gene72540.t1 |
| Gene Sequence |
| Protein sequence |
