Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77448.t1 | XP_024639766.1 | 97.3 | 256 | 7 | 0 | 1 | 256 | 199 | 454 | 5.60E-144 | 520.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77448.t1 | O80612 | 59.5 | 279 | 113 | 0 | 1 | 279 | 210 | 488 | 2.1e-91 | 337.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77448.t1 | G7KF86 | 97.3 | 256 | 7 | 0 | 1 | 256 | 199 | 454 | 4.0e-144 | 520.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene77448 | 0.835631 | 1.50E-56 | -1.69E-46 |
| MS.gene049983 | MS.gene77448 | 0.802492 | 5.47E-49 | -1.69E-46 |
| MS.gene04998 | MS.gene77448 | 0.805277 | 1.44E-49 | -1.69E-46 |
| MS.gene050414 | MS.gene77448 | 0.865398 | 6.08E-65 | -1.69E-46 |
| MS.gene050646 | MS.gene77448 | 0.847452 | 1.15E-59 | -1.69E-46 |
| MS.gene050654 | MS.gene77448 | 0.811962 | 5.39E-51 | -1.69E-46 |
| MS.gene050945 | MS.gene77448 | 0.826658 | 2.40E-54 | -1.69E-46 |
| MS.gene051003 | MS.gene77448 | 0.802717 | 4.91E-49 | -1.69E-46 |
| MS.gene051043 | MS.gene77448 | 0.87983 | 9.05E-70 | -1.69E-46 |
| MS.gene051234 | MS.gene77448 | 0.823747 | 1.17E-53 | -1.69E-46 |
| MS.gene051343 | MS.gene77448 | 0.815573 | 8.63E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene77448 | 0.81907 | 1.41E-52 | -1.69E-46 |
| MS.gene051902 | MS.gene77448 | 0.838491 | 2.79E-57 | -1.69E-46 |
| MS.gene052072 | MS.gene77448 | 0.845449 | 4.03E-59 | -1.69E-46 |
| MS.gene052242 | MS.gene77448 | -0.800817 | 1.21E-48 | -1.69E-46 |
| MS.gene052296 | MS.gene77448 | 0.823051 | 1.71E-53 | -1.69E-46 |
| MS.gene052307 | MS.gene77448 | 0.83614 | 1.11E-56 | -1.69E-46 |
| MS.gene052609 | MS.gene77448 | 0.807488 | 4.93E-50 | -1.69E-46 |
| MS.gene052932 | MS.gene77448 | 0.815719 | 8.00E-52 | -1.69E-46 |
| MS.gene053456 | MS.gene77448 | 0.805981 | 1.03E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene77448 | 0.801608 | 8.31E-49 | -1.69E-46 |
| MS.gene054413 | MS.gene77448 | 0.812913 | 3.34E-51 | -1.69E-46 |
| MS.gene054709 | MS.gene77448 | 0.80635 | 8.58E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene77448 | 0.800303 | 1.54E-48 | -1.69E-46 |
| MS.gene056045 | MS.gene77448 | 0.824935 | 6.16E-54 | -1.69E-46 |
| MS.gene056181 | MS.gene77448 | 0.810283 | 1.24E-50 | -1.69E-46 |
| MS.gene056578 | MS.gene77448 | 0.83908 | 1.96E-57 | -1.69E-46 |
| MS.gene057102 | MS.gene77448 | 0.804301 | 2.31E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene77448 | 0.8043 | 2.31E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene77448 | -0.803829 | 2.89E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene77448 | 0.819884 | 9.19E-53 | -1.69E-46 |
| MS.gene060935 | MS.gene77448 | 0.816129 | 6.48E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene77448 | 0.838627 | 2.57E-57 | -1.69E-46 |
| MS.gene061100 | MS.gene77448 | 0.858183 | 9.82E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 80 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCACGCAATATTAAATT+TGG | 0.062060 | 5.1:-30884896 | MS.gene77448:CDS |
| GTTAAGATTTGTTGGTTTCT+TGG | 0.256150 | 5.1:-30880563 | MS.gene77448:CDS |
| AGCCACAGCTTGCTTCATTT+TGG | 0.256995 | 5.1:-30884851 | MS.gene77448:CDS |
| CCGAAAAGTTTCCCCTTGTT+TGG | 0.276039 | 5.1:+30882240 | None:intergenic |
| CTCTGCTTCATGACAGTCTT+GGG | 0.277737 | 5.1:-30881226 | MS.gene77448:CDS |
| GGTTGTTGCTAATCATGCTC+TGG | 0.342945 | 5.1:-30885513 | MS.gene77448:CDS |
| TGACAGTCTTGGGATTGATA+TGG | 0.358116 | 5.1:-30881216 | MS.gene77448:CDS |
| TTTGTGGCTTGGTGTTATTT+TGG | 0.363469 | 5.1:-30880452 | MS.gene77448:CDS |
| TCACCAAACAGGCACTCTAT+TGG | 0.367923 | 5.1:-30880503 | MS.gene77448:CDS |
| AATCATGCTCTGGGGACTCT+TGG | 0.371593 | 5.1:-30885503 | MS.gene77448:CDS |
| CACCAAACAGGCACTCTATT+GGG | 0.375778 | 5.1:-30880502 | MS.gene77448:CDS |
| GGAAGGCTATTCGAGCTTGC+GGG | 0.382882 | 5.1:-30880475 | MS.gene77448:CDS |
| AGCATTGCTATTATTACAAA+AGG | 0.384142 | 5.1:-30882204 | MS.gene77448:CDS |
| TCTCACGCAATATTAAATTT+GGG | 0.385329 | 5.1:-30884895 | MS.gene77448:CDS |
| CACTGTAGGTTAAGATTTGT+TGG | 0.387990 | 5.1:-30880571 | MS.gene77448:intron |
| ACTCTTATAATGTTGATTCA+TGG | 0.401876 | 5.1:-30882313 | MS.gene77448:CDS |
| TGGAGAGAAACGCTTATATC+AGG | 0.403950 | 5.1:-30883540 | MS.gene77448:CDS |
| GAGCTTGCGGGTTTGTGGCT+TGG | 0.406317 | 5.1:-30880463 | MS.gene77448:CDS |
| TGCCCAATAGAGTGCCTGTT+TGG | 0.412479 | 5.1:+30880500 | None:intergenic |
| GGACGGGTTGCAAGTGGGTC+AGG | 0.421255 | 5.1:-30880542 | MS.gene77448:CDS |
| TATTCGAGCTTGCGGGTTTG+TGG | 0.433370 | 5.1:-30880468 | MS.gene77448:CDS |
| CTGTCCAAGTTGATGACTGC+TGG | 0.438069 | 5.1:-30881353 | MS.gene77448:CDS |
| AGATTTGTTGGTTTCTTGGA+CGG | 0.447831 | 5.1:-30880559 | MS.gene77448:CDS |
| GCTCTGCTTCATGACAGTCT+TGG | 0.457574 | 5.1:-30881227 | MS.gene77448:CDS |
| ACTTGGTGGTGCTTCTGCTC+AGG | 0.458271 | 5.1:-30885447 | MS.gene77448:intron |
| TCTTATCAGCATTGCGACAT+AGG | 0.458731 | 5.1:-30882035 | MS.gene77448:CDS |
| CTGATGAAGGAGTGTATGCT+TGG | 0.472336 | 5.1:-30885535 | MS.gene77448:CDS |
| AAGAATACTGTGGAGGGGAT+TGG | 0.472820 | 5.1:-30881328 | MS.gene77448:CDS |
| GATTTGTTGGTTTCTTGGAC+GGG | 0.475013 | 5.1:-30880558 | MS.gene77448:CDS |
| GCATTGCTATTATTACAAAA+GGG | 0.478914 | 5.1:-30882203 | MS.gene77448:CDS |
| GAGGAAGCTGCTCACCAAAC+AGG | 0.479231 | 5.1:-30880514 | MS.gene77448:CDS |
| ATAGATCCTTGTACTCCTGC+AGG | 0.481561 | 5.1:-30882338 | MS.gene77448:CDS |
| TTTCCCCTTGTTTGGACGGT+GGG | 0.482384 | 5.1:+30882248 | None:intergenic |
| GTTGTTGCTAATCATGCTCT+GGG | 0.489198 | 5.1:-30885512 | MS.gene77448:CDS |
| CATGCTCTGGGGACTCTTGG+AGG | 0.505655 | 5.1:-30885500 | MS.gene77448:CDS |
| AAAGTTTCCCCTTGTTTGGA+CGG | 0.511985 | 5.1:+30882244 | None:intergenic |
| ACTACTGGCATTATTGAACT+TGG | 0.512510 | 5.1:-30885464 | MS.gene77448:CDS |
| ACTGGCATTATTGAACTTGG+TGG | 0.517297 | 5.1:-30885461 | MS.gene77448:CDS |
| AAGTAAATCTTCCTCGTCAT+GGG | 0.522232 | 5.1:+30881280 | None:intergenic |
| TTGCCCAGCAGTCATCAACT+TGG | 0.529085 | 5.1:+30881349 | None:intergenic |
| TATATCAGGAGATTCTAACT+TGG | 0.533486 | 5.1:-30883526 | MS.gene77448:CDS |
| TTCTTGGACGGGTTGCAAGT+GGG | 0.534910 | 5.1:-30880547 | MS.gene77448:CDS |
| GAGTACCCTGCAGGAGTACA+AGG | 0.538999 | 5.1:+30882332 | None:intergenic |
| ATATCAGGAGATTCTAACTT+GGG | 0.540822 | 5.1:-30883525 | MS.gene77448:intron |
| GAAGCAAGCTGTGGCTGTAA+AGG | 0.542738 | 5.1:+30884858 | None:intergenic |
| ATCATCCCACCGTCCAAACA+AGG | 0.546022 | 5.1:-30882253 | MS.gene77448:CDS |
| TTTCTTGGACGGGTTGCAAG+TGG | 0.546941 | 5.1:-30880548 | MS.gene77448:CDS |
| CTGGGCAAGAATACTGTGGA+GGG | 0.548975 | 5.1:-30881334 | MS.gene77448:CDS |
| AGGAAGGCTATTCGAGCTTG+CGG | 0.549246 | 5.1:-30880476 | MS.gene77448:CDS |
| GGTGATCCTTCAGAGACTAC+TGG | 0.549868 | 5.1:-30885479 | MS.gene77448:CDS |
| AAATTTCTTTCACACATCAA+AGG | 0.565474 | 5.1:-30881967 | MS.gene77448:intron |
| TTCACTTAGTGAGCTAGGAG+AGG | 0.565962 | 5.1:+30882286 | None:intergenic |
| TGATGAAGGAGTGTATGCTT+GGG | 0.566289 | 5.1:-30885534 | MS.gene77448:CDS |
| ACATTATAAGAGTACCCTGC+AGG | 0.569973 | 5.1:+30882323 | None:intergenic |
| CATTGCTATTATTACAAAAG+GGG | 0.571476 | 5.1:-30882202 | MS.gene77448:CDS |
| CATCGCTTCTCTTGATACAA+AGG | 0.571559 | 5.1:+30884928 | None:intergenic |
| AGCTTCTCAGTATATTCAGA+AGG | 0.575665 | 5.1:-30882369 | MS.gene77448:CDS |
| TTAATATTGCGTGAGAACAA+AGG | 0.575775 | 5.1:+30884902 | None:intergenic |
| GAAGTAAATCTTCCTCGTCA+TGG | 0.576351 | 5.1:+30881279 | None:intergenic |
| GCTTCTCAGTATATTCAGAA+GGG | 0.576641 | 5.1:-30882368 | MS.gene77448:CDS |
| CTATTATTACAAAAGGGGAA+AGG | 0.578107 | 5.1:-30882197 | MS.gene77448:intron |
| GCAAGTGGGTCAGGCTGCAG+AGG | 0.587143 | 5.1:-30880533 | MS.gene77448:CDS |
| GCACTCTATTGGGCAGAGGA+AGG | 0.595572 | 5.1:-30880492 | MS.gene77448:CDS |
| TGTCCAAGTTGATGACTGCT+GGG | 0.602078 | 5.1:-30881352 | MS.gene77448:CDS |
| GTTTCCCCTTGTTTGGACGG+TGG | 0.605584 | 5.1:+30882247 | None:intergenic |
| AGAATGTTGCTCATGACTCA+TGG | 0.607083 | 5.1:-30883560 | MS.gene77448:CDS |
| ACAGGCACTCTATTGGGCAG+AGG | 0.610855 | 5.1:-30880496 | MS.gene77448:CDS |
| ATAATGCCAGTAGTCTCTGA+AGG | 0.616776 | 5.1:+30885473 | None:intergenic |
| TCATCCCACCGTCCAAACAA+GGG | 0.624302 | 5.1:-30882252 | MS.gene77448:CDS |
| CTTCTCAGTATATTCAGAAG+GGG | 0.627978 | 5.1:-30882367 | MS.gene77448:CDS |
| TAGATCCTTGTACTCCTGCA+GGG | 0.629301 | 5.1:-30882337 | MS.gene77448:CDS |
| CATCCCACCGTCCAAACAAG+GGG | 0.635715 | 5.1:-30882251 | MS.gene77448:CDS |
| GCTGGGCAAGAATACTGTGG+AGG | 0.643454 | 5.1:-30881335 | MS.gene77448:CDS |
| AAAATATGTCTCCCATGACG+AGG | 0.661548 | 5.1:-30881291 | MS.gene77448:CDS |
| GGCCAAAATGAAGCAAGCTG+TGG | 0.669202 | 5.1:+30884849 | None:intergenic |
| TGGGCAAGAATACTGTGGAG+GGG | 0.700121 | 5.1:-30881333 | MS.gene77448:CDS |
| GGATTGATATGGATGATGAG+AGG | 0.704385 | 5.1:-30881205 | MS.gene77448:intron |
| ACTGCTGGGCAAGAATACTG+TGG | 0.705946 | 5.1:-30881338 | MS.gene77448:CDS |
| AACTTGGACAGATAAGCCTG+TGG | 0.706967 | 5.1:+30881365 | None:intergenic |
| TTGTTGCTAATCATGCTCTG+GGG | 0.748131 | 5.1:-30885511 | MS.gene77448:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTTGTATACATTATTT+CGG | - | chr5.1:30883426-30883445 | MS.gene77448:intron | 10.0% |
| !! | TTAAAGAAAAAATAATACTT+TGG | + | chr5.1:30882903-30882922 | None:intergenic | 10.0% |
| !!! | ATTTTAATATATGGTTATTT+AGG | - | chr5.1:30880732-30880751 | MS.gene77448:intron | 10.0% |
| !!! | CAATCATTTATTTTAATATA+TGG | - | chr5.1:30880723-30880742 | MS.gene77448:intron | 10.0% |
| !! | AAAAGGTTTATAATTCTTAT+TGG | - | chr5.1:30882292-30882311 | MS.gene77448:CDS | 15.0% |
| !! | AAGAGAAATAAAAGATAAAA+AGG | - | chr5.1:30885180-30885199 | MS.gene77448:intron | 15.0% |
| !! | AATAGATTTAATAATTAGGA+AGG | - | chr5.1:30880867-30880886 | MS.gene77448:intron | 15.0% |
| !! | GGAAAATAGATTTAATAATT+AGG | - | chr5.1:30880863-30880882 | MS.gene77448:intron | 15.0% |
| !! | TTAATTTCAAAATCATGAAA+GGG | + | chr5.1:30883339-30883358 | None:intergenic | 15.0% |
| !!! | AAATGTAAGTGTTTTATAAA+AGG | + | chr5.1:30881757-30881776 | None:intergenic | 15.0% |
| !!! | AATTATAAACCTTTTGATAT+GGG | + | chr5.1:30882287-30882306 | None:intergenic | 15.0% |
| !!! | ACTGTTTTTTCTAAAATAAA+AGG | + | chr5.1:30881937-30881956 | None:intergenic | 15.0% |
| !!! | ATGATCTTATTTATAATAGT+AGG | + | chr5.1:30880817-30880836 | None:intergenic | 15.0% |
| !!! | GTATTGTTCTATTTAATTTA+TGG | - | chr5.1:30882532-30882551 | MS.gene77448:intron | 15.0% |
| !!! | TTTAATTTCAAAATCATGAA+AGG | + | chr5.1:30883340-30883359 | None:intergenic | 15.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | + | chr5.1:30882937-30882956 | None:intergenic | 20.0% |
| !! | AATAGTTGATTAGGATAATT+TGG | - | chr5.1:30882936-30882955 | MS.gene77448:intron | 20.0% |
| !! | ACATTTGAATATATAAAGTG+CGG | - | chr5.1:30884828-30884847 | MS.gene77448:intron | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr5.1:30882839-30882858 | None:intergenic | 20.0% |
| !! | AGTACTATCTTTCTTTATAT+TGG | - | chr5.1:30883373-30883392 | MS.gene77448:intron | 20.0% |
| !! | CTAATCATATCTTCTAAATT+TGG | - | chr5.1:30882356-30882375 | MS.gene77448:CDS | 20.0% |
| !! | GTAACATAGTATTAATTGAA+GGG | + | chr5.1:30882873-30882892 | None:intergenic | 20.0% |
| !! | GTCTTAAAAGAAAAATAAGT+GGG | + | chr5.1:30884810-30884829 | None:intergenic | 20.0% |
| !! | TAACAACTAATTACTAACAT+TGG | + | chr5.1:30883067-30883086 | None:intergenic | 20.0% |
| !! | TATTATAAGTTTATTCTAGC+TGG | - | chr5.1:30883307-30883326 | MS.gene77448:intron | 20.0% |
| !! | TATTGTTCGAAAATTTCATT+GGG | - | chr5.1:30880585-30880604 | MS.gene77448:intron | 20.0% |
| !! | TGATAACATAACATCAAATA+TGG | + | chr5.1:30884330-30884349 | None:intergenic | 20.0% |
| !! | TGTAACATAGTATTAATTGA+AGG | + | chr5.1:30882874-30882893 | None:intergenic | 20.0% |
| !! | TGTCTTAAAAGAAAAATAAG+TGG | + | chr5.1:30884811-30884830 | None:intergenic | 20.0% |
| !! | TTATTGTTCGAAAATTTCAT+TGG | - | chr5.1:30880584-30880603 | MS.gene77448:intron | 20.0% |
| !!! | ATACATCAAACAACAATTTT+AGG | - | chr5.1:30884983-30885002 | MS.gene77448:intron | 20.0% |
| !!! | GAATTATAAACCTTTTGATA+TGG | + | chr5.1:30882288-30882307 | None:intergenic | 20.0% |
| !!! | TAAGTGTTTTATAAAAGGTA+AGG | + | chr5.1:30881752-30881771 | None:intergenic | 20.0% |
| !!! | TACATCAAACAACAATTTTA+GGG | - | chr5.1:30884984-30885003 | MS.gene77448:intron | 20.0% |
| !!! | TTATAAAAGGTAAGGTATTT+CGG | + | chr5.1:30881744-30881763 | None:intergenic | 20.0% |
| !!! | TTCTAACTTACTCTTATTTT+AGG | - | chr5.1:30881031-30881050 | MS.gene77448:intron | 20.0% |
| !!! | TTTCATCTTCTTTTTGATTA+CGG | - | chr5.1:30880984-30881003 | MS.gene77448:intron | 20.0% |
| !!! | TTTTTCTAAAATAAAAGGCA+AGG | + | chr5.1:30881932-30881951 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTATATTTGAGTC+CGG | - | chr5.1:30884526-30884545 | MS.gene77448:intron | 20.0% |
| ! | AAACAAACCAATAGTTGATT+AGG | - | chr5.1:30882927-30882946 | MS.gene77448:intron | 25.0% |
| ! | AAATTCATTTGTCATGTGAT+AGG | + | chr5.1:30881013-30881032 | None:intergenic | 25.0% |
| ! | AAATTTCTTTCACACATCAA+AGG | - | chr5.1:30884018-30884037 | MS.gene77448:intron | 25.0% |
| ! | AAGCAAAAACAAGTTATGTT+TGG | - | chr5.1:30884272-30884291 | MS.gene77448:intron | 25.0% |
| ! | AATTAGGTTAAACTTGTAGA+AGG | - | chr5.1:30881686-30881705 | MS.gene77448:intron | 25.0% |
| ! | AATTAGTATTCTCATGAAAC+TGG | - | chr5.1:30884367-30884386 | MS.gene77448:intron | 25.0% |
| ! | AATTTACCAATGATGTTTCA+TGG | - | chr5.1:30881249-30881268 | MS.gene77448:CDS | 25.0% |
| ! | ACAAACTATGTTAAAATGCT+TGG | + | chr5.1:30882698-30882717 | None:intergenic | 25.0% |
| ! | ACTATCTTTCTTTATATTGG+CGG | - | chr5.1:30883376-30883395 | MS.gene77448:intron | 25.0% |
| ! | AGACAAACAACTCAATTAAA+AGG | + | chr5.1:30883852-30883871 | None:intergenic | 25.0% |
| ! | AGGATATTAAAGCATAACAT+TGG | + | chr5.1:30882253-30882272 | None:intergenic | 25.0% |
| ! | ATATAACAATGTTAACTAGG+GGG | + | chr5.1:30883179-30883198 | None:intergenic | 25.0% |
| ! | ATGAACATGTGTTTATAAGT+GGG | - | chr5.1:30881374-30881393 | MS.gene77448:CDS | 25.0% |
| ! | ATTTACCAATGATGTTTCAT+GGG | - | chr5.1:30881250-30881269 | MS.gene77448:CDS | 25.0% |
| ! | CATATAACAATGTTAACTAG+GGG | + | chr5.1:30883180-30883199 | None:intergenic | 25.0% |
| ! | GAACATTACTGTTGAAATTT+GGG | + | chr5.1:30882230-30882249 | None:intergenic | 25.0% |
| ! | GACAAACAACTCAATTAAAA+GGG | + | chr5.1:30883851-30883870 | None:intergenic | 25.0% |
| ! | GCATATAACAATGTTAACTA+GGG | + | chr5.1:30883181-30883200 | None:intergenic | 25.0% |
| ! | GCTTGAAAAATGAAAAAGAT+AGG | + | chr5.1:30882558-30882577 | None:intergenic | 25.0% |
| ! | GGATATTAAAGCATAACATT+GGG | + | chr5.1:30882252-30882271 | None:intergenic | 25.0% |
| ! | GTTAGTTAATACTTGTAAGT+GGG | - | chr5.1:30881309-30881328 | MS.gene77448:CDS | 25.0% |
| ! | TCATGAGAATACTAATTTGA+CGG | + | chr5.1:30884364-30884383 | None:intergenic | 25.0% |
| ! | TCTCACGCAATATTAAATTT+GGG | - | chr5.1:30881090-30881109 | MS.gene77448:intron | 25.0% |
| ! | TGCAGTTATTTGTATTTCTT+AGG | - | chr5.1:30880771-30880790 | MS.gene77448:intron | 25.0% |
| ! | TGTTAGTTAATACTTGTAAG+TGG | - | chr5.1:30881308-30881327 | MS.gene77448:CDS | 25.0% |
| ! | TTAGTTAATACTTGTAAGTG+GGG | - | chr5.1:30881310-30881329 | MS.gene77448:CDS | 25.0% |
| ! | TTCTCACGCAATATTAAATT+TGG | - | chr5.1:30881089-30881108 | MS.gene77448:intron | 25.0% |
| ! | TTGTGTTGAGTATATTCTTA+AGG | - | chr5.1:30881180-30881199 | MS.gene77448:intron | 25.0% |
| ! | TTTATCCAGAATAACCTTAA+TGG | + | chr5.1:30882668-30882687 | None:intergenic | 25.0% |
| !! | AGCATTGCTATTATTACAAA+AGG | - | chr5.1:30883781-30883800 | MS.gene77448:intron | 25.0% |
| !! | CATTGCTATTATTACAAAAG+GGG | - | chr5.1:30883783-30883802 | MS.gene77448:intron | 25.0% |
| !! | GCATTGCTATTATTACAAAA+GGG | - | chr5.1:30883782-30883801 | MS.gene77448:intron | 25.0% |
| !! | TCTCGTGTTTTATACAATAT+TGG | + | chr5.1:30881541-30881560 | None:intergenic | 25.0% |
| !! | TGACAAATGAAAAGCATAAA+CGG | + | chr5.1:30883507-30883526 | None:intergenic | 25.0% |
| !! | TTTTTGTGCTTTATGGTTAT+TGG | - | chr5.1:30884044-30884063 | MS.gene77448:intron | 25.0% |
| !!! | ACTCTTATAATGTTGATTCA+TGG | - | chr5.1:30883672-30883691 | MS.gene77448:intron | 25.0% |
| !!! | ATTGTTGTTTGATGTATGAA+TGG | + | chr5.1:30884980-30884999 | None:intergenic | 25.0% |
| !!! | TAATATGCTACTTTCCATTA+AGG | - | chr5.1:30882651-30882670 | MS.gene77448:intron | 25.0% |
| !!! | TTCAAAATGAATGTCACTTT+CGG | - | chr5.1:30882810-30882829 | MS.gene77448:intron | 25.0% |
| !!! | TTCATCTTCTTTTTGATTAC+GGG | - | chr5.1:30880985-30881004 | MS.gene77448:intron | 25.0% |
| !!! | TTGTTGTTTGATGTATGAAT+GGG | + | chr5.1:30884979-30884998 | None:intergenic | 25.0% |
| !!! | TTTTTGAAGAAGCTTAAAGT+TGG | - | chr5.1:30883896-30883915 | MS.gene77448:intron | 25.0% |
| ACATCAAATATGGTGAAGTT+TGG | + | chr5.1:30884320-30884339 | None:intergenic | 30.0% | |
| ACTTTCCATTAAGGTTATTC+TGG | - | chr5.1:30882660-30882679 | MS.gene77448:intron | 30.0% | |
| AGAGTAGTAATCAAGTCTAA+AGG | + | chr5.1:30882512-30882531 | None:intergenic | 30.0% | |
| AGAGTTTGAGAAAAGAGAAA+GGG | - | chr5.1:30885121-30885140 | MS.gene77448:intron | 30.0% | |
| ATATACATGATCTCTTCAGA+TGG | - | chr5.1:30883554-30883573 | MS.gene77448:CDS | 30.0% | |
| ATATCAGGAGATTCTAACTT+GGG | - | chr5.1:30882460-30882479 | MS.gene77448:intron | 30.0% | |
| ATTCATTGTTAGCACTTTGA+AGG | - | chr5.1:30880895-30880914 | MS.gene77448:intron | 30.0% | |
| ATTGAAACCTAACAAGAGAA+AGG | - | chr5.1:30885261-30885280 | MS.gene77448:intron | 30.0% | |
| ATTGCACACATATTAAGGAA+TGG | + | chr5.1:30882993-30883012 | None:intergenic | 30.0% | |
| ATTGTATAAAACACGAGATC+TGG | - | chr5.1:30881543-30881562 | MS.gene77448:intron | 30.0% | |
| CAAAAGTCAAAGTTCTACAA+GGG | + | chr5.1:30883203-30883222 | None:intergenic | 30.0% | |
| CATGAACATGTGTTTATAAG+TGG | - | chr5.1:30881373-30881392 | MS.gene77448:CDS | 30.0% | |
| CTATTATTACAAAAGGGGAA+AGG | - | chr5.1:30883788-30883807 | MS.gene77448:intron | 30.0% | |
| CTGAATGTTCAATGCTAATA+AGG | + | chr5.1:30884955-30884974 | None:intergenic | 30.0% | |
| CTTCAGATGGTAAAATGATT+TGG | - | chr5.1:30883567-30883586 | MS.gene77448:intron | 30.0% | |
| GAAAGAGATTAATAATCACC+AGG | + | chr5.1:30881160-30881179 | None:intergenic | 30.0% | |
| GGAACATTACTGTTGAAATT+TGG | + | chr5.1:30882231-30882250 | None:intergenic | 30.0% | |
| GGCATATAACAATGTTAACT+AGG | + | chr5.1:30883182-30883201 | None:intergenic | 30.0% | |
| TACAATAACTTCCTGAAGTT+TGG | - | chr5.1:30885012-30885031 | MS.gene77448:intron | 30.0% | |
| TAGAGAATGATCCACTTATT+GGG | - | chr5.1:30880652-30880671 | MS.gene77448:intron | 30.0% | |
| TATAACAATGTTAACTAGGG+GGG | + | chr5.1:30883178-30883197 | None:intergenic | 30.0% | |
| TATATCAGGAGATTCTAACT+TGG | - | chr5.1:30882459-30882478 | MS.gene77448:intron | 30.0% | |
| TCAAAAGTCAAAGTTCTACA+AGG | + | chr5.1:30883204-30883223 | None:intergenic | 30.0% | |
| TGAACATGTGTTTATAAGTG+GGG | - | chr5.1:30881375-30881394 | MS.gene77448:CDS | 30.0% | |
| TGAGTTGTTTGTCTTAAAGT+TGG | - | chr5.1:30883858-30883877 | MS.gene77448:intron | 30.0% | |
| TTAATATTGCGTGAGAACAA+AGG | + | chr5.1:30881086-30881105 | None:intergenic | 30.0% | |
| TTAGAGAATGATCCACTTAT+TGG | - | chr5.1:30880651-30880670 | MS.gene77448:intron | 30.0% | |
| TTCCTTAATATGTGTGCAAT+TGG | - | chr5.1:30882993-30883012 | MS.gene77448:intron | 30.0% | |
| ! | AACTTTTATACCTAAGCTTC+AGG | - | chr5.1:30883976-30883995 | MS.gene77448:intron | 30.0% |
| ! | AAGGTTCTTTTTGTGCTTTA+TGG | - | chr5.1:30884037-30884056 | MS.gene77448:intron | 30.0% |
| ! | ACTTTTATACCTAAGCTTCA+GGG | - | chr5.1:30883977-30883996 | MS.gene77448:intron | 30.0% |
| ! | CATTTGTCAATCTTTTCACT+TGG | - | chr5.1:30883518-30883537 | MS.gene77448:intron | 30.0% |
| ! | GACAAATGAAAAGCATAAAC+GGG | + | chr5.1:30883506-30883525 | None:intergenic | 30.0% |
| ! | TTAGTCTAAAGTAGATGCAT+TGG | - | chr5.1:30884139-30884158 | MS.gene77448:intron | 30.0% |
| !! | CGTGTTTTGTTAAAAGAAGA+AGG | + | chr5.1:30881858-30881877 | None:intergenic | 30.0% |
| !! | GTGTGTGTATACTGATTTAT+TGG | - | chr5.1:30881214-30881233 | MS.gene77448:CDS | 30.0% |
| !! | GTTAAGATTTGTTGGTTTCT+TGG | - | chr5.1:30885422-30885441 | MS.gene77448:intron | 30.0% |
| !! | TTAGAAAGTATCAAACACTG+TGG | + | chr5.1:30882389-30882408 | None:intergenic | 30.0% |
| !!! | CTTGTTTTTTGTTTCTGTTG+CGG | - | chr5.1:30881632-30881651 | MS.gene77448:intron | 30.0% |
| AAAAATTTCCCCTGAAGCTT+AGG | + | chr5.1:30883989-30884008 | None:intergenic | 35.0% | |
| AACAAGAGAAAGGTGATGAA+TGG | - | chr5.1:30885271-30885290 | MS.gene77448:intron | 35.0% | |
| AAGTAAATCTTCCTCGTCAT+GGG | + | chr5.1:30884708-30884727 | None:intergenic | 35.0% | |
| ACTACTGGCATTATTGAACT+TGG | - | chr5.1:30880521-30880540 | MS.gene77448:CDS | 35.0% | |
| AGATCATTCAATCAGAACTG+TGG | - | chr5.1:30880830-30880849 | MS.gene77448:intron | 35.0% | |
| AGCCAATTGCACACATATTA+AGG | + | chr5.1:30882998-30883017 | None:intergenic | 35.0% | |
| AGCTTCTCAGTATATTCAGA+AGG | - | chr5.1:30883616-30883635 | MS.gene77448:intron | 35.0% | |
| ATATTTGAATGCGTACAGTG+CGG | - | chr5.1:30884914-30884933 | MS.gene77448:CDS | 35.0% | |
| ATCATTCAATCAGAACTGTG+GGG | - | chr5.1:30880832-30880851 | MS.gene77448:intron | 35.0% | |
| ATCCTACTACCCATATCAAA+AGG | - | chr5.1:30882275-30882294 | MS.gene77448:CDS | 35.0% | |
| ATTGTTAAAGAGTCCCACAT+TGG | - | chr5.1:30881339-30881358 | MS.gene77448:CDS | 35.0% | |
| CAAACTCATCCTCACAAAAT+CGG | + | chr5.1:30882206-30882225 | None:intergenic | 35.0% | |
| CACTGTAGGTTAAGATTTGT+TGG | - | chr5.1:30885414-30885433 | MS.gene77448:intron | 35.0% | |
| CTTCTCAGTATATTCAGAAG+GGG | - | chr5.1:30883618-30883637 | MS.gene77448:intron | 35.0% | |
| CTTGTTAGGTTTCAATTGAC+TGG | + | chr5.1:30885257-30885276 | None:intergenic | 35.0% | |
| GAACATGTGTTTATAAGTGG+GGG | - | chr5.1:30881376-30881395 | MS.gene77448:CDS | 35.0% | |
| GAGAGTTTGAGAAAAGAGAA+AGG | - | chr5.1:30885120-30885139 | MS.gene77448:intron | 35.0% | |
| GAGTTTGAGAAAAGAGAAAG+GGG | - | chr5.1:30885122-30885141 | MS.gene77448:intron | 35.0% | |
| GATAACTCTATGCATTCCTT+TGG | - | chr5.1:30883469-30883488 | MS.gene77448:intron | 35.0% | |
| GATCATTCAATCAGAACTGT+GGG | - | chr5.1:30880831-30880850 | MS.gene77448:intron | 35.0% | |
| GATTGAGAAGAAGAGAAACA+CGG | - | chr5.1:30881577-30881596 | MS.gene77448:intron | 35.0% | |
| GCTTCTCAGTATATTCAGAA+GGG | - | chr5.1:30883617-30883636 | MS.gene77448:intron | 35.0% | |
| GTTTGATTGTGAGAACAAAG+TGG | - | chr5.1:30885078-30885097 | MS.gene77448:intron | 35.0% | |
| TAGAAGGCTTATCTCTTGTT+TGG | - | chr5.1:30881702-30881721 | MS.gene77448:intron | 35.0% | |
| TCACAATCAAACATATCCTG+AGG | + | chr5.1:30885070-30885089 | None:intergenic | 35.0% | |
| TCTTTCCCATGAAACATCAT+TGG | + | chr5.1:30881258-30881277 | None:intergenic | 35.0% | |
| TGATATGGGTAGTAGGATAT+AGG | + | chr5.1:30882273-30882292 | None:intergenic | 35.0% | |
| TGTATTTCTTAGGAGCAGTT+AGG | - | chr5.1:30880781-30880800 | MS.gene77448:intron | 35.0% | |
| TTAATACTTGTAAGTGGGGA+TGG | - | chr5.1:30881314-30881333 | MS.gene77448:CDS | 35.0% | |
| TTCAATTGACTGGAGAGAAT+AGG | + | chr5.1:30885247-30885266 | None:intergenic | 35.0% | |
| TTCATCACCTTTCTCTTGTT+AGG | + | chr5.1:30885271-30885290 | None:intergenic | 35.0% | |
| ! | AACCTTTTGATATGGGTAGT+AGG | + | chr5.1:30882280-30882299 | None:intergenic | 35.0% |
| ! | AAGGTAAGGTATTTCGGATT+TGG | + | chr5.1:30881738-30881757 | None:intergenic | 35.0% |
| ! | AGAAGGCTTATCTCTTGTTT+GGG | - | chr5.1:30881703-30881722 | MS.gene77448:intron | 35.0% |
| ! | AGATAGTCTTGGGATTGATA+TGG | - | chr5.1:30884855-30884874 | MS.gene77448:CDS | 35.0% |
| ! | AGGTAAGGTATTTCGGATTT+GGG | + | chr5.1:30881737-30881756 | None:intergenic | 35.0% |
| ! | ATGCCATATTTTGTCCAATG+TGG | + | chr5.1:30881356-30881375 | None:intergenic | 35.0% |
| ! | CTTTTATACCTAAGCTTCAG+GGG | - | chr5.1:30883978-30883997 | MS.gene77448:intron | 35.0% |
| ! | TAAGCTTCAGGGGAAATTTT+TGG | - | chr5.1:30883988-30884007 | MS.gene77448:intron | 35.0% |
| ! | TCGATTCCTGATTGATTCTT+TGG | - | chr5.1:30884566-30884585 | MS.gene77448:intron | 35.0% |
| ! | TGCCATATTTTGTCCAATGT+GGG | + | chr5.1:30881355-30881374 | None:intergenic | 35.0% |
| ! | TTGTCAATCTTTTCACTTGG+AGG | - | chr5.1:30883521-30883540 | MS.gene77448:intron | 35.0% |
| !! | AACTCAATTGATTCGAGCTA+AGG | + | chr5.1:30883147-30883166 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr5.1:30883019-30883038 | MS.gene77448:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr5.1:30883038-30883019 | None:intergenic | 35.0% |
| !! | ACTCAATTGATTCGAGCTAA+GGG | + | chr5.1:30883146-30883165 | None:intergenic | 35.0% |
| !! | AGATTTGTTGGTTTCTTGGA+CGG | - | chr5.1:30885426-30885445 | MS.gene77448:intron | 35.0% |
| !! | ATTTGCTCTGGAATTACAGA+GGG | - | chr5.1:30880921-30880940 | MS.gene77448:intron | 35.0% |
| !! | GAATAGGTAGAGGGTTTTAT+AGG | + | chr5.1:30885231-30885250 | None:intergenic | 35.0% |
| !!! | CTGTGTTAGTTTTTCGGATT+GGG | - | chr5.1:30884596-30884615 | MS.gene77448:intron | 35.0% |
| !!! | CTTTTTTCACTTAGTGAGCT+AGG | + | chr5.1:30883707-30883726 | None:intergenic | 35.0% |
| !!! | TAGTTTTTTTCTCCTTCGTC+CGG | - | chr5.1:30883090-30883109 | MS.gene77448:intron | 35.0% |
| !!! | TGTGTTAGTTTTTCGGATTG+GGG | - | chr5.1:30884597-30884616 | MS.gene77448:intron | 35.0% |
| !!! | TTTGTGGCTTGGTGTTATTT+TGG | - | chr5.1:30885533-30885552 | MS.gene77448:CDS | 35.0% |
| AAAATATGTCTCCCATGACG+AGG | - | chr5.1:30884694-30884713 | MS.gene77448:intron | 40.0% | |
| AAGAGACTACACAACAACCA+TGG | + | chr5.1:30885353-30885372 | None:intergenic | 40.0% | |
| AATGTTAACTAGGGGGATGT+CGG | + | chr5.1:30883237-30883256 | None:intergenic | 40.0% | |
| ACAAAGTGGTAGAGAGAACT+AGG | - | chr5.1:30885092-30885111 | MS.gene77448:intron | 40.0% | |
| ACAGCACCAAAGAATCAATC+AGG | + | chr5.1:30884575-30884594 | None:intergenic | 40.0% | |
| ACTGGCATTATTGAACTTGG+TGG | - | chr5.1:30880524-30880543 | MS.gene77448:CDS | 40.0% | |
| AGAAAGGTGATGAATGGATG+AGG | - | chr5.1:30885277-30885296 | MS.gene77448:intron | 40.0% | |
| AGAATGTTGCTCATGACTCA+TGG | - | chr5.1:30882425-30882444 | MS.gene77448:intron | 40.0% | |
| AGTGCGGAAATAGATAGTCT+TGG | - | chr5.1:30884844-30884863 | MS.gene77448:intron | 40.0% | |
| AGTTCCTAAGTAGGTTCGAT+TGG | + | chr5.1:30882150-30882169 | None:intergenic | 40.0% | |
| ATAATGCCAGTAGTCTCTGA+AGG | + | chr5.1:30880515-30880534 | None:intergenic | 40.0% | |
| CATCGCTTCTCTTGATACAA+AGG | + | chr5.1:30881060-30881079 | None:intergenic | 40.0% | |
| GAAAGGTGATGAATGGATGA+GGG | - | chr5.1:30885278-30885297 | MS.gene77448:intron | 40.0% | |
| GAAATCGACCAAAAACGACA+CGG | + | chr5.1:30881495-30881514 | None:intergenic | 40.0% | |
| GAAGAGGACTAGGTCAAATT+AGG | - | chr5.1:30881670-30881689 | MS.gene77448:intron | 40.0% | |
| GAAGTAAATCTTCCTCGTCA+TGG | + | chr5.1:30884709-30884728 | None:intergenic | 40.0% | |
| GATGCAAATGATGTACTTGC+CGG | + | chr5.1:30884548-30884567 | None:intergenic | 40.0% | |
| GATTCTCCTCATGAGTCATA+TGG | - | chr5.1:30882333-30882352 | MS.gene77448:CDS | 40.0% | |
| GGATTGATATGGATGATGAG+AGG | - | chr5.1:30884780-30884799 | MS.gene77448:intron | 40.0% | |
| GTAAGTCTTGAGTTCAAACC+CGG | + | chr5.1:30883112-30883131 | None:intergenic | 40.0% | |
| GTCCCACATTGGACAAAATA+TGG | - | chr5.1:30881350-30881369 | MS.gene77448:CDS | 40.0% | |
| GTGCGGAAATAGATAGTCTT+GGG | - | chr5.1:30884845-30884864 | MS.gene77448:intron | 40.0% | |
| GTGTAGTTTCACCAAACTTC+AGG | + | chr5.1:30885026-30885045 | None:intergenic | 40.0% | |
| GTTGTTGCTAATCATGCTCT+GGG | - | chr5.1:30880473-30880492 | MS.gene77448:CDS | 40.0% | |
| GTTTGTAAGAACCCACTCAA+GGG | + | chr5.1:30882091-30882110 | None:intergenic | 40.0% | |
| TAAAGTCGGGGAACATAACA+CGG | + | chr5.1:30882113-30882132 | None:intergenic | 40.0% | |
| TATTTCGGATTTGGGCCTTA+TGG | + | chr5.1:30881729-30881748 | None:intergenic | 40.0% | |
| TCTTATCAGCATTGCGACAT+AGG | - | chr5.1:30883950-30883969 | MS.gene77448:intron | 40.0% | |
| TGACAGTCTTGGGATTGATA+TGG | - | chr5.1:30884769-30884788 | MS.gene77448:intron | 40.0% | |
| TGATTCGAGCTAAGGGATAA+AGG | + | chr5.1:30883139-30883158 | None:intergenic | 40.0% | |
| TGGAGAGAAACGCTTATATC+AGG | - | chr5.1:30882445-30882464 | MS.gene77448:intron | 40.0% | |
| TTACAACTTTGCCCTTGAGT+GGG | - | chr5.1:30882077-30882096 | MS.gene77448:intron | 40.0% | |
| TTGAAGGGTAGAGTAATCCA+TGG | - | chr5.1:30885333-30885352 | MS.gene77448:intron | 40.0% | |
| TTGTTGCTAATCATGCTCTG+GGG | - | chr5.1:30880474-30880493 | MS.gene77448:CDS | 40.0% | |
| TTGTTGTGTAGTCTCTTGCT+GGG | - | chr5.1:30885356-30885375 | MS.gene77448:intron | 40.0% | |
| ! | AAAGTTTCCCCTTGTTTGGA+CGG | + | chr5.1:30883744-30883763 | None:intergenic | 40.0% |
| ! | CCAAACAAGGGGAAACTTTT+CGG | - | chr5.1:30883745-30883764 | MS.gene77448:intron | 40.0% |
| ! | CGATTTTGTGAGGATGAGTT+TGG | - | chr5.1:30882204-30882223 | MS.gene77448:CDS | 40.0% |
| ! | GATTAGCCATATGACTCATG+AGG | + | chr5.1:30882342-30882361 | None:intergenic | 40.0% |
| ! | TATCTCTTGTTTGGGCCATA+AGG | - | chr5.1:30881711-30881730 | MS.gene77448:intron | 40.0% |
| ! | TGAAAAGCATAAACGGGACA+TGG | + | chr5.1:30883500-30883519 | None:intergenic | 40.0% |
| ! | TGATGAAGGAGTGTATGCTT+GGG | - | chr5.1:30880451-30880470 | MS.gene77448:CDS | 40.0% |
| ! | TGCAGCTAGGTTTGTTTGAA+GGG | - | chr5.1:30885318-30885337 | MS.gene77448:intron | 40.0% |
| ! | TTATTGGGAAGCGTGATGTT+AGG | - | chr5.1:30880667-30880686 | MS.gene77448:intron | 40.0% |
| !! | ACATTATAAGAGTACCCTGC+AGG | + | chr5.1:30883665-30883684 | None:intergenic | 40.0% |
| !! | CATTTGCTCTGGAATTACAG+AGG | - | chr5.1:30880920-30880939 | MS.gene77448:intron | 40.0% |
| !! | GATTTGTTGGTTTCTTGGAC+GGG | - | chr5.1:30885427-30885446 | MS.gene77448:intron | 40.0% |
| !! | TTTGCTCTGGAATTACAGAG+GGG | - | chr5.1:30880922-30880941 | MS.gene77448:intron | 40.0% |
| !!! | AGTTTTTTTCTCCTTCGTCC+GGG | - | chr5.1:30883091-30883110 | MS.gene77448:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr5.1:30883023-30883042 | MS.gene77448:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr5.1:30883042-30883023 | None:intergenic | 40.0% |
| !!! | GCTGTGCTGTGTTAGTTTTT+CGG | - | chr5.1:30884590-30884609 | MS.gene77448:intron | 40.0% |
| !!! | GCTGTGTTAGTTTTTCGGAT+TGG | - | chr5.1:30884595-30884614 | MS.gene77448:intron | 40.0% |
| !!! | TCGTTTTTGGTCGATTTCGT+GGG | - | chr5.1:30881497-30881516 | MS.gene77448:intron | 40.0% |
| AACTTGGACAGATAAGCCTG+TGG | + | chr5.1:30884623-30884642 | None:intergenic | 45.0% | |
| AAGAATACTGTGGAGGGGAT+TGG | - | chr5.1:30884657-30884676 | MS.gene77448:intron | 45.0% | |
| ACATCACGCTTCCCAATAAG+TGG | + | chr5.1:30880666-30880685 | None:intergenic | 45.0% | |
| ATAGATCCTTGTACTCCTGC+AGG | - | chr5.1:30883647-30883666 | MS.gene77448:intron | 45.0% | |
| ATGTTAACTAGGGGGATGTC+GGG | + | chr5.1:30883236-30883255 | None:intergenic | 45.0% | |
| ATTCAATCAGAACTGTGGGG+AGG | - | chr5.1:30880835-30880854 | MS.gene77448:intron | 45.0% | |
| CAACTAGCATGCAGCACATT+CGG | - | chr5.1:30884202-30884221 | MS.gene77448:intron | 45.0% | |
| CACCAAACAGGCACTCTATT+GGG | - | chr5.1:30885483-30885502 | MS.gene77448:CDS | 45.0% | |
| CCGAAAAGTTTCCCCTTGTT+TGG | + | chr5.1:30883748-30883767 | None:intergenic | 45.0% | |
| CTCTGCTTCATGACAGTCTT+GGG | - | chr5.1:30884759-30884778 | MS.gene77448:intron | 45.0% | |
| CTGGTGAAAGGACGTAAAGT+CGG | + | chr5.1:30882127-30882146 | None:intergenic | 45.0% | |
| GAAGCGTGATGTTAGGTATC+GGG | - | chr5.1:30880674-30880693 | MS.gene77448:intron | 45.0% | |
| GACTGGAGAGAATAGGTAGA+GGG | + | chr5.1:30885240-30885259 | None:intergenic | 45.0% | |
| GATGAATGGATGAGGGCTAA+AGG | - | chr5.1:30885285-30885304 | MS.gene77448:intron | 45.0% | |
| GGTTGTTGCTAATCATGCTC+TGG | - | chr5.1:30880472-30880491 | MS.gene77448:CDS | 45.0% | |
| GGTTTGTAAGAACCCACTCA+AGG | + | chr5.1:30882092-30882111 | None:intergenic | 45.0% | |
| GTGAAACTACACATGCAGTG+CGG | - | chr5.1:30885034-30885053 | MS.gene77448:intron | 45.0% | |
| GTTACAACTTTGCCCTTGAG+TGG | - | chr5.1:30882076-30882095 | MS.gene77448:intron | 45.0% | |
| GTTGTTGTGTAGTCTCTTGC+TGG | - | chr5.1:30885355-30885374 | MS.gene77448:intron | 45.0% | |
| TAGATCCTTGTACTCCTGCA+GGG | - | chr5.1:30883648-30883667 | MS.gene77448:intron | 45.0% | |
| TATACTGAGAAGCTGCACTG+AGG | + | chr5.1:30883610-30883629 | None:intergenic | 45.0% | |
| TCACCAAACAGGCACTCTAT+TGG | - | chr5.1:30885482-30885501 | MS.gene77448:CDS | 45.0% | |
| TCAGGAACGAGTTCCTAAGT+AGG | + | chr5.1:30882159-30882178 | None:intergenic | 45.0% | |
| TGAAACTACACATGCAGTGC+GGG | - | chr5.1:30885035-30885054 | MS.gene77448:intron | 45.0% | |
| TGACTGGAGAGAATAGGTAG+AGG | + | chr5.1:30885241-30885260 | None:intergenic | 45.0% | |
| TGGTGAAAGGACGTAAAGTC+GGG | + | chr5.1:30882126-30882145 | None:intergenic | 45.0% | |
| TGTCTTGCTTGTGACACTGT+AGG | - | chr5.1:30885400-30885419 | MS.gene77448:intron | 45.0% | |
| TTCACTTAGTGAGCTAGGAG+AGG | + | chr5.1:30883702-30883721 | None:intergenic | 45.0% | |
| TTCTGTTGCGGAAACTCCAT+GGG | - | chr5.1:30881644-30881663 | MS.gene77448:intron | 45.0% | |
| TTTCTGTTGCGGAAACTCCA+TGG | - | chr5.1:30881643-30881662 | MS.gene77448:intron | 45.0% | |
| ! | AATGTTAACTAGGGGGGTGT+CGG | + | chr5.1:30883172-30883191 | None:intergenic | 45.0% |
| ! | CTGATGAAGGAGTGTATGCT+TGG | - | chr5.1:30880450-30880469 | MS.gene77448:CDS | 45.0% |
| ! | GGAAGCGTGATGTTAGGTAT+CGG | - | chr5.1:30880673-30880692 | MS.gene77448:intron | 45.0% |
| ! | GTGCAGCTAGGTTTGTTTGA+AGG | - | chr5.1:30885317-30885336 | MS.gene77448:intron | 45.0% |
| !! | AGCCACAGCTTGCTTCATTT+TGG | - | chr5.1:30881134-30881153 | MS.gene77448:intron | 45.0% |
| !! | CTTTGAAGGAGCATTTGCTC+TGG | - | chr5.1:30880909-30880928 | MS.gene77448:intron | 45.0% |
| !! | TGTCCAAGTTGATGACTGCT+GGG | - | chr5.1:30884633-30884652 | MS.gene77448:intron | 45.0% |
| !!! | ACTTTGCTCCGTGTCGTTTT+TGG | - | chr5.1:30881484-30881503 | MS.gene77448:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr5.1:30883022-30883041 | MS.gene77448:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr5.1:30883041-30883022 | None:intergenic | 45.0% |
| !!! | GTCGTTTTTGGTCGATTTCG+TGG | - | chr5.1:30881496-30881515 | MS.gene77448:intron | 45.0% |
| !!! | GTGGGCAGATCGAGTTTTTT+TGG | - | chr5.1:30881515-30881534 | MS.gene77448:intron | 45.0% |
| !!! | TTTTTAAAATATTTTTTTAC+AGG | + | chr5.1:30882621-30882640 | None:intergenic | 5.0% |
| ACTGCTGGGCAAGAATACTG+TGG | - | chr5.1:30884647-30884666 | MS.gene77448:intron | 50.0% | |
| AGGAAGGCTATTCGAGCTTG+CGG | - | chr5.1:30885509-30885528 | MS.gene77448:CDS | 50.0% | |
| AGGCGAGGATCAATGTAGTC+AGG | + | chr5.1:30882177-30882196 | None:intergenic | 50.0% | |
| ATCATCCCACCGTCCAAACA+AGG | - | chr5.1:30883732-30883751 | MS.gene77448:intron | 50.0% | |
| CCAGCCAATCGAACCTACTT+AGG | - | chr5.1:30882143-30882162 | MS.gene77448:intron | 50.0% | |
| CCTAAGTAGGTTCGATTGGC+TGG | + | chr5.1:30882146-30882165 | None:intergenic | 50.0% | |
| CTGGGCAAGAATACTGTGGA+GGG | - | chr5.1:30884651-30884670 | MS.gene77448:intron | 50.0% | |
| GAAACTCCATGGGGAAGAAG+AGG | - | chr5.1:30881654-30881673 | MS.gene77448:intron | 50.0% | |
| GAAGCAAGCTGTGGCTGTAA+AGG | + | chr5.1:30881130-30881149 | None:intergenic | 50.0% | |
| GCTCTGCTTCATGACAGTCT+TGG | - | chr5.1:30884758-30884777 | MS.gene77448:intron | 50.0% | |
| GGCCAAAATGAAGCAAGCTG+TGG | + | chr5.1:30881139-30881158 | None:intergenic | 50.0% | |
| GGTGAAAGGACGTAAAGTCG+GGG | + | chr5.1:30882125-30882144 | None:intergenic | 50.0% | |
| GGTGATCCTTCAGAGACTAC+TGG | - | chr5.1:30880506-30880525 | MS.gene77448:CDS | 50.0% | |
| TATTCGAGCTTGCGGGTTTG+TGG | - | chr5.1:30885517-30885536 | MS.gene77448:CDS | 50.0% | |
| TCATCCCACCGTCCAAACAA+GGG | - | chr5.1:30883733-30883752 | MS.gene77448:intron | 50.0% | |
| TCTGTTGCGGAAACTCCATG+GGG | - | chr5.1:30881645-30881664 | MS.gene77448:intron | 50.0% | |
| TGACCTGTGCATTCAGAGCA+AGG | + | chr5.1:30881884-30881903 | None:intergenic | 50.0% | |
| TGGGCAAGAATACTGTGGAG+GGG | - | chr5.1:30884652-30884671 | MS.gene77448:intron | 50.0% | |
| TGTGTAGTCTCTTGCTGGGA+GGG | - | chr5.1:30885360-30885379 | MS.gene77448:intron | 50.0% | |
| TTGAGTTCAAACCCGGACGA+AGG | + | chr5.1:30883105-30883124 | None:intergenic | 50.0% | |
| TTGCCCAGCAGTCATCAACT+TGG | + | chr5.1:30884639-30884658 | None:intergenic | 50.0% | |
| TTGTGTAGTCTCTTGCTGGG+AGG | - | chr5.1:30885359-30885378 | MS.gene77448:intron | 50.0% | |
| ! | AGGTTCGATTGGCTGGTGAA+AGG | + | chr5.1:30882139-30882158 | None:intergenic | 50.0% |
| ! | TGCCCAATAGAGTGCCTGTT+TGG | + | chr5.1:30885488-30885507 | None:intergenic | 50.0% |
| ! | TTTCCCCTTGTTTGGACGGT+GGG | + | chr5.1:30883740-30883759 | None:intergenic | 50.0% |
| !! | AATCATGCTCTGGGGACTCT+TGG | - | chr5.1:30880482-30880501 | MS.gene77448:CDS | 50.0% |
| !! | ATGTTAACTAGGGGGGTGTC+GGG | + | chr5.1:30883171-30883190 | None:intergenic | 50.0% |
| !! | CAGCTTGCTTCATTTTGGCC+TGG | - | chr5.1:30881139-30881158 | MS.gene77448:intron | 50.0% |
| !! | CTGTCCAAGTTGATGACTGC+TGG | - | chr5.1:30884632-30884651 | MS.gene77448:intron | 50.0% |
| !! | TTCTTGGACGGGTTGCAAGT+GGG | - | chr5.1:30885438-30885457 | MS.gene77448:intron | 50.0% |
| !! | TTTCTTGGACGGGTTGCAAG+TGG | - | chr5.1:30885437-30885456 | MS.gene77448:intron | 50.0% |
| ACAGGCACTCTATTGGGCAG+AGG | - | chr5.1:30885489-30885508 | MS.gene77448:CDS | 55.0% | |
| ACGGGACATGGCACAACCAA+AGG | + | chr5.1:30883488-30883507 | None:intergenic | 55.0% | |
| ATCGTGCGATCCTACGTGCT+GGG | + | chr5.1:30881432-30881451 | None:intergenic | 55.0% | |
| CAGAACTGTGGGGAGGATTC+AGG | - | chr5.1:30880842-30880861 | MS.gene77448:intron | 55.0% | |
| CATCCCACCGTCCAAACAAG+GGG | - | chr5.1:30883734-30883753 | MS.gene77448:intron | 55.0% | |
| CCATGGGGAAGAAGAGGACT+AGG | - | chr5.1:30881660-30881679 | MS.gene77448:intron | 55.0% | |
| CCTAGTCCTCTTCTTCCCCA+TGG | + | chr5.1:30881663-30881682 | None:intergenic | 55.0% | |
| CCTGTGCATTCAGAGCAAGG+TGG | + | chr5.1:30881881-30881900 | None:intergenic | 55.0% | |
| GAGGAAGCTGCTCACCAAAC+AGG | - | chr5.1:30885471-30885490 | MS.gene77448:CDS | 55.0% | |
| GCACTCTATTGGGCAGAGGA+AGG | - | chr5.1:30885493-30885512 | MS.gene77448:CDS | 55.0% | |
| GCTGGGCAAGAATACTGTGG+AGG | - | chr5.1:30884650-30884669 | MS.gene77448:intron | 55.0% | |
| GGAAGGCTATTCGAGCTTGC+GGG | - | chr5.1:30885510-30885529 | MS.gene77448:CDS | 55.0% | |
| GGAGCAAAGTCGAAGCACGA+CGG | + | chr5.1:30881474-30881493 | None:intergenic | 55.0% | |
| TGAGGGCTAAAGGCAGTTGC+TGG | - | chr5.1:30885295-30885314 | MS.gene77448:intron | 55.0% | |
| TTGCTGGGAGGGAGAGCAAT+GGG | - | chr5.1:30885371-30885390 | MS.gene77448:intron | 55.0% | |
| ! | CCACCTTGCTCTGAATGCAC+AGG | - | chr5.1:30881878-30881897 | MS.gene77448:intron | 55.0% |
| ! | GAGTACCCTGCAGGAGTACA+AGG | + | chr5.1:30883656-30883675 | None:intergenic | 55.0% |
| ! | GTGCGGGATACATTAGCCTC+AGG | - | chr5.1:30885051-30885070 | MS.gene77448:intron | 55.0% |
| ! | GTTTCCCCTTGTTTGGACGG+TGG | + | chr5.1:30883741-30883760 | None:intergenic | 55.0% |
| !! | ACTTGGTGGTGCTTCTGCTC+AGG | - | chr5.1:30880538-30880557 | MS.gene77448:CDS | 55.0% |
| !! | CCTCACAAAATCGGCTCGTG+AGG | + | chr5.1:30882197-30882216 | None:intergenic | 55.0% |
| !! | CCTCACGAGCCGATTTTGTG+AGG | - | chr5.1:30882194-30882213 | MS.gene77448:intron | 55.0% |
| !! | GCGTGATGTTAGGTATCGGG+TGG | - | chr5.1:30880677-30880696 | MS.gene77448:intron | 55.0% |
| !! | GTTTTTCGGATTGGGGCCAC+AGG | - | chr5.1:30884604-30884623 | MS.gene77448:intron | 55.0% |
| AGGATCGAGTCCCAGCACGT+AGG | - | chr5.1:30881419-30881438 | MS.gene77448:intron | 60.0% | |
| AGGCAGTTGCTGGTGCAGCT+AGG | - | chr5.1:30885305-30885324 | MS.gene77448:intron | 60.0% | |
| CAATCCTCGCCAAGGTAGCC+AGG | - | chr5.1:30881399-30881418 | MS.gene77448:intron | 60.0% | |
| CTTGCTGGGAGGGAGAGCAA+TGG | - | chr5.1:30885370-30885389 | MS.gene77448:intron | 60.0% | |
| GAAGCACGACGGAGTAGCTG+AGG | + | chr5.1:30881463-30881482 | None:intergenic | 60.0% | |
| GAGCTTGCGGGTTTGTGGCT+TGG | - | chr5.1:30885522-30885541 | MS.gene77448:CDS | 60.0% | |
| GATCGTGCGATCCTACGTGC+TGG | + | chr5.1:30881433-30881452 | None:intergenic | 60.0% | |
| GGACTCGATCCTGGCTACCT+TGG | + | chr5.1:30881411-30881430 | None:intergenic | 60.0% | |
| TACGTGCTGGGACTCGATCC+TGG | + | chr5.1:30881420-30881439 | None:intergenic | 60.0% | |
| !! | CAAAATCGGCTCGTGAGGCG+AGG | + | chr5.1:30882192-30882211 | None:intergenic | 60.0% |
| !! | CATGCTCTGGGGACTCTTGG+AGG | - | chr5.1:30880485-30880504 | MS.gene77448:CDS | 60.0% |
| AGTGGGGGCAATCCTCGCCA+AGG | - | chr5.1:30881391-30881410 | MS.gene77448:intron | 65.0% | |
| CGATCCTGGCTACCTTGGCG+AGG | + | chr5.1:30881406-30881425 | None:intergenic | 65.0% | |
| GCAAGTGGGTCAGGCTGCAG+AGG | - | chr5.1:30885452-30885471 | MS.gene77448:CDS | 65.0% | |
| !! | GGACGGGTTGCAAGTGGGTC+AGG | - | chr5.1:30885443-30885462 | MS.gene77448:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 30880447 | 30885560 | 30880447 | ID=MS.gene77448 |
| chr5.1 | mRNA | 30880447 | 30885560 | 30880447 | ID=MS.gene77448.t1;Parent=MS.gene77448 |
| chr5.1 | exon | 30885448 | 30885560 | 30885448 | ID=MS.gene77448.t1.exon1;Parent=MS.gene77448.t1 |
| chr5.1 | CDS | 30885448 | 30885560 | 30885448 | ID=cds.MS.gene77448.t1;Parent=MS.gene77448.t1 |
| chr5.1 | exon | 30884847 | 30884954 | 30884847 | ID=MS.gene77448.t1.exon2;Parent=MS.gene77448.t1 |
| chr5.1 | CDS | 30884847 | 30884954 | 30884847 | ID=cds.MS.gene77448.t1;Parent=MS.gene77448.t1 |
| chr5.1 | exon | 30883526 | 30883580 | 30883526 | ID=MS.gene77448.t1.exon3;Parent=MS.gene77448.t1 |
| chr5.1 | CDS | 30883526 | 30883580 | 30883526 | ID=cds.MS.gene77448.t1;Parent=MS.gene77448.t1 |
| chr5.1 | exon | 30882198 | 30882389 | 30882198 | ID=MS.gene77448.t1.exon4;Parent=MS.gene77448.t1 |
| chr5.1 | CDS | 30882198 | 30882389 | 30882198 | ID=cds.MS.gene77448.t1;Parent=MS.gene77448.t1 |
| chr5.1 | exon | 30881968 | 30882065 | 30881968 | ID=MS.gene77448.t1.exon5;Parent=MS.gene77448.t1 |
| chr5.1 | CDS | 30881968 | 30882065 | 30881968 | ID=cds.MS.gene77448.t1;Parent=MS.gene77448.t1 |
| chr5.1 | exon | 30881206 | 30881402 | 30881206 | ID=MS.gene77448.t1.exon6;Parent=MS.gene77448.t1 |
| chr5.1 | CDS | 30881206 | 30881402 | 30881206 | ID=cds.MS.gene77448.t1;Parent=MS.gene77448.t1 |
| chr5.1 | exon | 30880447 | 30880585 | 30880447 | ID=MS.gene77448.t1.exon7;Parent=MS.gene77448.t1 |
| chr5.1 | CDS | 30880447 | 30880585 | 30880447 | ID=cds.MS.gene77448.t1;Parent=MS.gene77448.t1 |
| Gene Sequence |
| Protein sequence |
