Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80283.t1 | AEX20346.1 | 99.7 | 344 | 1 | 0 | 1 | 344 | 1 | 344 | 1.20E-198 | 702.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80283.t1 | Q9ZTR1 | 92.1 | 342 | 18 | 2 | 3 | 344 | 2 | 334 | 1.9e-181 | 636.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80283.t1 | H2EIY6 | 99.7 | 344 | 1 | 0 | 1 | 344 | 1 | 344 | 8.6e-199 | 702.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049756 | MS.gene80283 | 0.803064 | 4.17E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene80283 | 0.805586 | 1.24E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene80283 | 0.815028 | 1.14E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene80283 | -0.816213 | 6.21E-52 | -1.69E-46 |
| MS.gene050762 | MS.gene80283 | 0.801361 | 9.34E-49 | -1.69E-46 |
| MS.gene050763 | MS.gene80283 | 0.802254 | 6.12E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene80283 | 0.800386 | 1.48E-48 | -1.69E-46 |
| MS.gene051789 | MS.gene80283 | 0.811532 | 6.68E-51 | -1.69E-46 |
| MS.gene052178 | MS.gene80283 | 0.807945 | 3.95E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene80283 | 0.805797 | 1.12E-49 | -1.69E-46 |
| MS.gene053074 | MS.gene80283 | 0.801662 | 8.10E-49 | -1.69E-46 |
| MS.gene054184 | MS.gene80283 | 0.817554 | 3.10E-52 | -1.69E-46 |
| MS.gene054185 | MS.gene80283 | 0.823318 | 1.48E-53 | -1.69E-46 |
| MS.gene055133 | MS.gene80283 | 0.81647 | 5.44E-52 | -1.69E-46 |
| MS.gene055207 | MS.gene80283 | 0.821468 | 3.97E-53 | -1.69E-46 |
| MS.gene055441 | MS.gene80283 | 0.815872 | 7.40E-52 | -1.69E-46 |
| MS.gene056760 | MS.gene80283 | 0.803871 | 2.83E-49 | -1.69E-46 |
| MS.gene057393 | MS.gene80283 | 0.81806 | 2.39E-52 | -1.69E-46 |
| MS.gene057754 | MS.gene80283 | 0.821753 | 3.41E-53 | -1.69E-46 |
| MS.gene058238 | MS.gene80283 | 0.805395 | 1.36E-49 | -1.69E-46 |
| MS.gene060084 | MS.gene80283 | 0.813852 | 2.07E-51 | -1.69E-46 |
| MS.gene060476 | MS.gene80283 | 0.822851 | 1.90E-53 | -1.69E-46 |
| MS.gene061113 | MS.gene80283 | 0.807691 | 4.47E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42684 | MS.gene80283 | PPI |
| MS.gene42624 | MS.gene80283 | PPI |
| MS.gene80283 | MS.gene058418 | PPI |
| MS.gene014976 | MS.gene80283 | PPI |
| MS.gene80283 | MS.gene016160 | PPI |
| MS.gene32768 | MS.gene80283 | PPI |
| MS.gene051552 | MS.gene80283 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80283.t1 | MTR_5g034470 | 97.674 | 344 | 7 | 1 | 1 | 344 | 1 | 343 | 0.0 | 691 |
| MS.gene80283.t1 | MTR_5g034470 | 94.362 | 337 | 18 | 1 | 1 | 337 | 1 | 336 | 0.0 | 653 |
| MS.gene80283.t1 | MTR_8g063940 | 81.089 | 349 | 51 | 3 | 3 | 344 | 2 | 342 | 0.0 | 581 |
| MS.gene80283.t1 | MTR_3g091090 | 65.060 | 332 | 89 | 5 | 34 | 339 | 23 | 353 | 3.87e-149 | 424 |
| MS.gene80283.t1 | MTR_1g028360 | 66.337 | 303 | 87 | 4 | 50 | 339 | 57 | 357 | 8.17e-141 | 404 |
| MS.gene80283.t1 | MTR_3g078190 | 60.473 | 296 | 96 | 2 | 53 | 344 | 41 | 319 | 1.89e-135 | 388 |
| MS.gene80283.t1 | MTR_1g015300 | 33.942 | 274 | 162 | 10 | 34 | 297 | 11 | 275 | 1.51e-39 | 142 |
| MS.gene80283.t1 | MTR_5g006140 | 36.771 | 223 | 133 | 6 | 73 | 290 | 42 | 261 | 2.98e-38 | 139 |
| MS.gene80283.t1 | MTR_5g006140 | 37.264 | 212 | 126 | 5 | 73 | 279 | 42 | 251 | 4.76e-38 | 137 |
| MS.gene80283.t1 | MTR_3g104960 | 30.709 | 254 | 150 | 10 | 47 | 292 | 28 | 263 | 2.00e-28 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80283.t1 | AT1G23820 | 79.880 | 333 | 64 | 2 | 12 | 344 | 5 | 334 | 0.0 | 556 |
| MS.gene80283.t1 | AT1G70310 | 79.403 | 335 | 61 | 3 | 14 | 344 | 10 | 340 | 0.0 | 545 |
| MS.gene80283.t1 | AT1G23820 | 80.297 | 269 | 51 | 1 | 12 | 280 | 49 | 315 | 3.09e-160 | 451 |
| MS.gene80283.t1 | AT5G53120 | 64.671 | 334 | 91 | 4 | 34 | 341 | 23 | 355 | 1.03e-148 | 423 |
| MS.gene80283.t1 | AT5G53120 | 64.671 | 334 | 91 | 4 | 34 | 341 | 23 | 355 | 1.03e-148 | 423 |
| MS.gene80283.t1 | AT5G53120 | 64.671 | 334 | 91 | 4 | 34 | 341 | 23 | 355 | 1.03e-148 | 423 |
| MS.gene80283.t1 | AT5G53120 | 64.671 | 334 | 91 | 4 | 34 | 341 | 23 | 355 | 1.03e-148 | 423 |
| MS.gene80283.t1 | AT5G53120 | 64.671 | 334 | 91 | 4 | 34 | 341 | 23 | 355 | 1.03e-148 | 423 |
| MS.gene80283.t1 | AT5G53120 | 64.671 | 334 | 91 | 4 | 34 | 341 | 40 | 372 | 3.49e-148 | 422 |
| MS.gene80283.t1 | AT5G53120 | 59.557 | 361 | 92 | 5 | 34 | 341 | 23 | 382 | 3.58e-144 | 413 |
| MS.gene80283.t1 | AT5G19530 | 31.900 | 279 | 169 | 8 | 70 | 343 | 40 | 302 | 7.22e-41 | 146 |
| MS.gene80283.t1 | AT5G19530 | 31.900 | 279 | 169 | 8 | 70 | 343 | 47 | 309 | 8.19e-41 | 146 |
Find 73 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTTGGTTGAGGTTCTTT+TGG | 0.239220 | 5.4:-24377924 | None:intergenic |
| TCAAGGAAAATCTGATTATC+AGG | 0.273203 | 5.4:+24379493 | MS.gene80283:CDS |
| ATATGGCAAGGTTCTTGTTT+TGG | 0.280455 | 5.4:+24379625 | MS.gene80283:CDS |
| CTCAATTCCAAACCCCAAAA+AGG | 0.285078 | 5.4:+24379718 | MS.gene80283:CDS |
| TCAAAACCTACTGCTATATC+AGG | 0.285866 | 5.4:-24381138 | None:intergenic |
| GGTTTATCTTCTGTTATTCC+TGG | 0.301003 | 5.4:+24377945 | MS.gene80283:CDS |
| TTCTTCTCTTTGCCTCTTCA+AGG | 0.305491 | 5.4:-24377853 | None:intergenic |
| TCAGGATGTTATGGTCTTCC+AGG | 0.350984 | 5.4:+24379511 | MS.gene80283:CDS |
| TTGGTCATTGGTGGAGGAGA+TGG | 0.355582 | 5.4:+24380445 | MS.gene80283:CDS |
| TTTAGAAGCAATTGCTCTCT+TGG | 0.357834 | 5.4:-24382637 | None:intergenic |
| ACTGCATCATAAGTTCCTTC+TGG | 0.359338 | 5.4:-24381306 | None:intergenic |
| ATCTGATTATCAGGATGTTA+TGG | 0.375563 | 5.4:+24379502 | MS.gene80283:CDS |
| TATCTTCTGTTATTCCTGGC+TGG | 0.386803 | 5.4:+24377949 | MS.gene80283:CDS |
| TGACAGAGCCTTTGAATACT+TGG | 0.386990 | 5.4:-24381590 | None:intergenic |
| TTGCTCAACTGAGGGGCCTT+CGG | 0.394265 | 5.4:+24382213 | MS.gene80283:CDS |
| GTGGATTCATCTGATCCTAT+TGG | 0.395416 | 5.4:+24381333 | MS.gene80283:CDS |
| ATAACAGAAGATAAACCATT+TGG | 0.430526 | 5.4:-24377939 | None:intergenic |
| GTACTCAGGCGGAAAGTATA+TGG | 0.432205 | 5.4:+24381526 | MS.gene80283:CDS |
| GTGGAAAAGATTCTGTTTCA+AGG | 0.447500 | 5.4:+24379476 | MS.gene80283:CDS |
| TTCGGTCGATTTCAAGCATC+CGG | 0.461644 | 5.4:+24382231 | MS.gene80283:CDS |
| TGGCTATCATTCTCATCAAT+AGG | 0.466884 | 5.4:-24382259 | None:intergenic |
| TCAGAGTTGTAAAATTTCAA+TGG | 0.468115 | 5.4:-24382295 | None:intergenic |
| TGAGTACACACAACACCTCC+TGG | 0.469052 | 5.4:-24381510 | None:intergenic |
| AAAACGAACCAGGCCACATT+GGG | 0.470461 | 5.4:-24377986 | None:intergenic |
| GTTGCAAGGGCTCTTCGTCC+AGG | 0.475620 | 5.4:+24381492 | MS.gene80283:CDS |
| TTTATGCTTTGCTCAACTGA+GGG | 0.479096 | 5.4:+24382205 | MS.gene80283:CDS |
| TCTTCTCTTTGCCTCTTCAA+GGG | 0.480585 | 5.4:-24377852 | None:intergenic |
| GAAGATAAACCATTTGGTTG+AGG | 0.481438 | 5.4:-24377933 | None:intergenic |
| CCAAAAGAACCTCAACCAAA+TGG | 0.482653 | 5.4:+24377924 | MS.gene80283:CDS |
| AACTTATGATGCAGTTATTG+TGG | 0.485527 | 5.4:+24381314 | MS.gene80283:CDS |
| GTCATTGGTGGAGGAGATGG+AGG | 0.490380 | 5.4:+24380448 | MS.gene80283:CDS |
| ATTGCTCTCTTGGCAAAAGA+TGG | 0.491734 | 5.4:-24382627 | None:intergenic |
| CCACGTGTGACACTTAATAT+CGG | 0.495007 | 5.4:+24381165 | MS.gene80283:CDS |
| TCAATGGTCTTCCTGCATGC+TGG | 0.497270 | 5.4:-24382279 | None:intergenic |
| AAGGCTCTGTCAACTATGCT+TGG | 0.497721 | 5.4:+24381601 | MS.gene80283:CDS |
| GAAATTAGCCCAATGTGGCC+TGG | 0.504538 | 5.4:+24377978 | MS.gene80283:CDS |
| TTCTCATCAATAGGATTCAC+CGG | 0.513261 | 5.4:-24382250 | None:intergenic |
| AGGGGAGGCTCACTCATTGA+AGG | 0.518756 | 5.4:+24379454 | MS.gene80283:intron |
| GCAAACAGAAAGCTGCTGAA+TGG | 0.526418 | 5.4:-24382605 | None:intergenic |
| GAAGATGAGTGATCATCTCT+TGG | 0.533026 | 5.4:-24379688 | None:intergenic |
| AGAACACACCTTGGGTATGT+AGG | 0.534999 | 5.4:-24381633 | None:intergenic |
| AGGAGATGGAGGAGTCCTGC+GGG | 0.539206 | 5.4:+24380459 | MS.gene80283:CDS |
| CTAATTTCAGAGAACCAGCC+AGG | 0.562845 | 5.4:-24377963 | None:intergenic |
| GGTCATTCAGCTCACAGAAA+GGG | 0.562916 | 5.4:+24379652 | MS.gene80283:CDS |
| GGGTCATTCAGCTCACAGAA+AGG | 0.569721 | 5.4:+24379651 | MS.gene80283:CDS |
| GAGAATGATAGCCAGCATGC+AGG | 0.575153 | 5.4:+24382268 | MS.gene80283:CDS |
| GTAGTCAGCAACATATGGCA+AGG | 0.575663 | 5.4:+24379613 | MS.gene80283:intron |
| CCTCTTCAAGGGAAAATCTG+TGG | 0.576006 | 5.4:-24377841 | None:intergenic |
| ATGAGTGATCATCTCTTGGT+AGG | 0.576912 | 5.4:-24379684 | None:intergenic |
| AAGGGAAAATCTGTGGACTC+AGG | 0.578610 | 5.4:-24377834 | None:intergenic |
| GAAAACGAACCAGGCCACAT+TGG | 0.582261 | 5.4:-24377987 | None:intergenic |
| GAGGAGATGGAGGAGTCCTG+CGG | 0.584086 | 5.4:+24380458 | MS.gene80283:CDS |
| GCTTCATATGCATATCATTG+AGG | 0.585111 | 5.4:+24381548 | MS.gene80283:CDS |
| AGGAGGTGTTGTGTGTACTC+AGG | 0.589734 | 5.4:+24381512 | MS.gene80283:CDS |
| CATTTGTGAAATAGACAAGA+TGG | 0.590675 | 5.4:+24380516 | MS.gene80283:CDS |
| CAAAACCTACTGCTATATCA+GGG | 0.592364 | 5.4:-24381137 | None:intergenic |
| AATTGTCGCCAAGTATTCAA+AGG | 0.594618 | 5.4:+24381582 | MS.gene80283:CDS |
| TTATGCTTTGCTCAACTGAG+GGG | 0.601606 | 5.4:+24382206 | MS.gene80283:CDS |
| TGTCAACTATGCTTGGACCA+CGG | 0.611981 | 5.4:+24381608 | MS.gene80283:CDS |
| GGAGGCTCACTCATTGAAGG+TGG | 0.624884 | 5.4:+24379457 | MS.gene80283:CDS |
| GTGACACTTAATATCGGCGA+TGG | 0.629074 | 5.4:+24381171 | MS.gene80283:CDS |
| GGGTTTGGAATTGAGCAAAG+AGG | 0.635906 | 5.4:-24379710 | None:intergenic |
| AGGTGTTGTGTGTACTCAGG+CGG | 0.646480 | 5.4:+24381515 | MS.gene80283:CDS |
| ATCTGTGGACTCAGGAAGTG+TGG | 0.650713 | 5.4:-24377826 | None:intergenic |
| CCACGGTTCCTACATACCCA+AGG | 0.659865 | 5.4:+24381625 | MS.gene80283:CDS |
| GCAAGGGCTCTTCGTCCAGG+AGG | 0.667733 | 5.4:+24381495 | MS.gene80283:CDS |
| AATGGCGTGAAACTTCCCGC+AGG | 0.668044 | 5.4:-24380474 | None:intergenic |
| GGATGCTTGAAATCGACCGA+AGG | 0.670797 | 5.4:-24382229 | None:intergenic |
| GTTTCAGAGACACCGTTGTG+AGG | 0.681469 | 5.4:-24377897 | None:intergenic |
| CCGATATTAAGTGTCACACG+TGG | 0.687158 | 5.4:-24381165 | None:intergenic |
| TCTCTGAAATTAGCCCAATG+TGG | 0.705739 | 5.4:+24377973 | MS.gene80283:CDS |
| CCTTGGGTATGTAGGAACCG+TGG | 0.729877 | 5.4:-24381625 | None:intergenic |
| GAAGATCAACTACCTCACAA+CGG | 0.763149 | 5.4:+24377885 | MS.gene80283:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATATATATTTTTTTTTA+AGG | + | chr5.4:24378296-24378315 | MS.gene80283:intron | 0.0% |
| !! | ATATACTATAAATTATTAGA+GGG | - | chr5.4:24379761-24379780 | None:intergenic | 10.0% |
| !!! | ACTTTTATTTTTTAAAATCA+CGG | + | chr5.4:24378932-24378951 | MS.gene80283:intron | 10.0% |
| !!! | ATATTTTTTTTTAAGGTTTT+GGG | + | chr5.4:24378303-24378322 | MS.gene80283:intron | 10.0% |
| !!! | GATATGATTATTTTTTATTA+TGG | + | chr5.4:24382141-24382160 | MS.gene80283:intron | 10.0% |
| !!! | TATATTTTTTTTTAAGGTTT+TGG | + | chr5.4:24378302-24378321 | MS.gene80283:intron | 10.0% |
| !!! | TTTTGATTATATGTAATATA+TGG | + | chr5.4:24378465-24378484 | MS.gene80283:intron | 10.0% |
| !! | ATTATAATAATGACAAATCA+TGG | - | chr5.4:24379232-24379251 | None:intergenic | 15.0% |
| !! | CATATACTATAAATTATTAG+AGG | - | chr5.4:24379762-24379781 | None:intergenic | 15.0% |
| !! | TAAAGACCATAAAAATTATA+AGG | - | chr5.4:24381377-24381396 | None:intergenic | 15.0% |
| !! | TTATAATAATGACAAATCAT+GGG | - | chr5.4:24379231-24379250 | None:intergenic | 15.0% |
| !!! | ATTTTTTAGAATCTAAAACA+AGG | + | chr5.4:24382446-24382465 | MS.gene80283:intron | 15.0% |
| !!! | TATAATTTTTATGGTCTTTA+CGG | + | chr5.4:24381377-24381396 | MS.gene80283:intron | 15.0% |
| !!! | TATTTTTTTTTAAGGTTTTG+GGG | + | chr5.4:24378304-24378323 | MS.gene80283:intron | 15.0% |
| !!! | TTTATTTTTTGATGAAACTT+AGG | + | chr5.4:24378091-24378110 | MS.gene80283:intron | 15.0% |
| !!! | TTTATTTTTTTTGTTTCAGT+GGG | + | chr5.4:24382173-24382192 | MS.gene80283:intron | 15.0% |
| !!! | TTTTAATCATTATATGTAGA+TGG | + | chr5.4:24379866-24379885 | MS.gene80283:intron | 15.0% |
| !!! | TTTTATTTTTTTTGTTTCAG+TGG | + | chr5.4:24382172-24382191 | MS.gene80283:intron | 15.0% |
| !!! | TTTTTTAGAATCTAAAACAA+GGG | + | chr5.4:24382447-24382466 | MS.gene80283:intron | 15.0% |
| !! | AAAAAAAAAACAGCAATAAG+CGG | - | chr5.4:24380997-24381016 | None:intergenic | 20.0% |
| !! | AAAAATGGAGAGTTAATATT+TGG | - | chr5.4:24382568-24382587 | None:intergenic | 20.0% |
| !! | AATTCAGGATAATAATTGTA+AGG | + | chr5.4:24379832-24379851 | MS.gene80283:intron | 20.0% |
| !! | ACTTAAACGTAAATAATCTA+CGG | - | chr5.4:24380027-24380046 | None:intergenic | 20.0% |
| !! | ATTAACAACATTGTAATATG+TGG | - | chr5.4:24381720-24381739 | None:intergenic | 20.0% |
| !! | CAAGTAAAAACAATAACAAA+TGG | - | chr5.4:24378749-24378768 | None:intergenic | 20.0% |
| !! | GTGAAAATAAATTTGAGAAA+TGG | - | chr5.4:24378706-24378725 | None:intergenic | 20.0% |
| !! | TATAATAATGACAAATCATG+GGG | - | chr5.4:24379230-24379249 | None:intergenic | 20.0% |
| !! | TTATGCTGATAAATGAATAA+GGG | - | chr5.4:24378061-24378080 | None:intergenic | 20.0% |
| !! | TTTATGCTGATAAATGAATA+AGG | - | chr5.4:24378062-24378081 | None:intergenic | 20.0% |
| !!! | AAAAGGTAATTGAATTTTCA+GGG | - | chr5.4:24379095-24379114 | None:intergenic | 20.0% |
| !!! | AAAGTATCAAATACCTTTTT+GGG | - | chr5.4:24379734-24379753 | None:intergenic | 20.0% |
| !!! | AAATATTAACTCTCCATTTT+TGG | + | chr5.4:24382567-24382586 | MS.gene80283:intron | 20.0% |
| !!! | AATAAGCTAAAAACAGTTTT+TGG | + | chr5.4:24380806-24380825 | MS.gene80283:intron | 20.0% |
| !!! | CAAAATTTTGACTAAAATTC+TGG | + | chr5.4:24378566-24378585 | MS.gene80283:intron | 20.0% |
| !!! | TATTGTTTTTACTTGCATAT+TGG | + | chr5.4:24378754-24378773 | MS.gene80283:intron | 20.0% |
| !!! | TGTTGTTAATTTTAAGATTG+CGG | + | chr5.4:24381730-24381749 | MS.gene80283:intron | 20.0% |
| !!! | TTGATTATGATTGTGTTTTT+AGG | + | chr5.4:24378248-24378267 | MS.gene80283:intron | 20.0% |
| !!! | TTGTTTTTTTGTTGTTTGTT+GGG | + | chr5.4:24378122-24378141 | MS.gene80283:intron | 20.0% |
| !!! | TTTTGAGAAAATGAACAAAA+GGG | - | chr5.4:24378021-24378040 | None:intergenic | 20.0% |
| !!! | TTTTTGAGAAAATGAACAAA+AGG | - | chr5.4:24378022-24378041 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCCTTCAAGTT+GGG | + | chr5.4:24380952-24380971 | MS.gene80283:intron | 20.0% |
| ! | AACCATTATGTATTACTGTT+AGG | - | chr5.4:24382426-24382445 | None:intergenic | 25.0% |
| ! | AATGTCTATATTGAATCTCT+TGG | + | chr5.4:24379913-24379932 | MS.gene80283:intron | 25.0% |
| ! | ACCATTATGTATTACTGTTA+GGG | - | chr5.4:24382425-24382444 | None:intergenic | 25.0% |
| ! | AGAAACATTGAATCTCATAT+TGG | + | chr5.4:24378839-24378858 | MS.gene80283:intron | 25.0% |
| ! | ATAACAGAAGATAAACCATT+TGG | - | chr5.4:24377942-24377961 | None:intergenic | 25.0% |
| ! | CTGAAATAAAGAACCAAAAA+TGG | - | chr5.4:24382583-24382602 | None:intergenic | 25.0% |
| ! | GTAGATAGTAGAAATTTGAT+TGG | + | chr5.4:24378638-24378657 | MS.gene80283:intron | 25.0% |
| ! | GTAGATTATTTACGTTTAAG+TGG | + | chr5.4:24380026-24380045 | MS.gene80283:intron | 25.0% |
| ! | GTTAATATTTGGAGAAGAAA+AGG | - | chr5.4:24382557-24382576 | None:intergenic | 25.0% |
| ! | TAAGAACATGTGATTAATGA+TGG | - | chr5.4:24379000-24379019 | None:intergenic | 25.0% |
| ! | TACTTGCATATTGGATTTAA+TGG | + | chr5.4:24378763-24378782 | MS.gene80283:intron | 25.0% |
| ! | TAGTTTGGCAAAAAAAATTC+AGG | + | chr5.4:24379817-24379836 | MS.gene80283:intron | 25.0% |
| ! | TATATCAGGGAAAAATTGTT+TGG | - | chr5.4:24381127-24381146 | None:intergenic | 25.0% |
| ! | TCAGAGTTGTAAAATTTCAA+TGG | - | chr5.4:24382298-24382317 | None:intergenic | 25.0% |
| ! | TCCCTAAATTCAAGAAAAAA+GGG | - | chr5.4:24378337-24378356 | None:intergenic | 25.0% |
| ! | TTCCCTAAATTCAAGAAAAA+AGG | - | chr5.4:24378338-24378357 | None:intergenic | 25.0% |
| !! | AAGTATCAAATACCTTTTTG+GGG | - | chr5.4:24379733-24379752 | None:intergenic | 25.0% |
| !! | ATTAATTTTGCTCTTCAAGA+TGG | + | chr5.4:24378398-24378417 | MS.gene80283:intron | 25.0% |
| !! | ATTGAAATTTTACAACTCTG+AGG | + | chr5.4:24382297-24382316 | MS.gene80283:CDS | 25.0% |
| !! | ATTGACTTTCTTATGTAGTT+TGG | + | chr5.4:24379802-24379821 | MS.gene80283:intron | 25.0% |
| !! | ATTTGGTATGGTTTATGTTT+TGG | + | chr5.4:24379275-24379294 | MS.gene80283:intron | 25.0% |
| !! | ATTTTCATCAATCAAGGATT+TGG | + | chr5.4:24378492-24378511 | MS.gene80283:intron | 25.0% |
| !! | CAAAAGGTAATTGAATTTTC+AGG | - | chr5.4:24379096-24379115 | None:intergenic | 25.0% |
| !! | GAAACGCCTTATAATTTTTA+TGG | + | chr5.4:24381368-24381387 | MS.gene80283:intron | 25.0% |
| !! | TATAACATGCTTTTCGATTA+GGG | + | chr5.4:24382119-24382138 | MS.gene80283:intron | 25.0% |
| !! | TTCTATTTTCTGTTAGGTTT+TGG | + | chr5.4:24380426-24380445 | MS.gene80283:intron | 25.0% |
| !! | TTTTCATCAATCAAGGATTT+GGG | + | chr5.4:24378493-24378512 | MS.gene80283:intron | 25.0% |
| !!! | CAAAGTATCAAATACCTTTT+TGG | - | chr5.4:24379735-24379754 | None:intergenic | 25.0% |
| !!! | CTTTTTTTTTTCCTTCAAGT+TGG | + | chr5.4:24380951-24380970 | MS.gene80283:intron | 25.0% |
| !!! | GTTGTTTTTTTGTTGTTTGT+TGG | + | chr5.4:24378121-24378140 | MS.gene80283:intron | 25.0% |
| AAACAGAACTAGTACTATGA+AGG | - | chr5.4:24379573-24379592 | None:intergenic | 30.0% | |
| AAACTATTTGCAAGAGTTCA+CGG | - | chr5.4:24380850-24380869 | None:intergenic | 30.0% | |
| AACAGAACTAGTACTATGAA+GGG | - | chr5.4:24379572-24379591 | None:intergenic | 30.0% | |
| AACTTATGATGCAGTTATTG+TGG | + | chr5.4:24381314-24381333 | MS.gene80283:CDS | 30.0% | |
| ACCCTAACAGTAATACATAA+TGG | + | chr5.4:24382421-24382440 | MS.gene80283:intron | 30.0% | |
| ACTATGCTTAAACACTTAAG+TGG | + | chr5.4:24381861-24381880 | MS.gene80283:intron | 30.0% | |
| AGTGAAGTGATTAAGAAACA+TGG | - | chr5.4:24381216-24381235 | None:intergenic | 30.0% | |
| ATCTGATTATCAGGATGTTA+TGG | + | chr5.4:24379502-24379521 | MS.gene80283:CDS | 30.0% | |
| CAACATTGTAATATGTGGAA+AGG | - | chr5.4:24381715-24381734 | None:intergenic | 30.0% | |
| CATTTGTGAAATAGACAAGA+TGG | + | chr5.4:24380516-24380535 | MS.gene80283:CDS | 30.0% | |
| CTTAATCACTTCACTGTTTA+GGG | + | chr5.4:24381221-24381240 | MS.gene80283:intron | 30.0% | |
| CTTATTCTCATAAATTCTCC+AGG | - | chr5.4:24380792-24380811 | None:intergenic | 30.0% | |
| GAATACATAACCAACACAAT+TGG | - | chr5.4:24382058-24382077 | None:intergenic | 30.0% | |
| GACATACTATCATCTTACTT+GGG | + | chr5.4:24380606-24380625 | MS.gene80283:intron | 30.0% | |
| GTTTCAAATCAACTATCTAG+TGG | - | chr5.4:24381949-24381968 | None:intergenic | 30.0% | |
| TAATTGATTGTTAGCTGATG+TGG | + | chr5.4:24378164-24378183 | MS.gene80283:intron | 30.0% | |
| TAGCAGCACTATTGTAATAT+AGG | - | chr5.4:24378541-24378560 | None:intergenic | 30.0% | |
| TATATTTCGCTGCAAACATT+TGG | + | chr5.4:24379258-24379277 | MS.gene80283:intron | 30.0% | |
| TATTATATGTCGAAGAGAGT+AGG | + | chr5.4:24380263-24380282 | MS.gene80283:intron | 30.0% | |
| TCAAGGAAAATCTGATTATC+AGG | + | chr5.4:24379493-24379512 | MS.gene80283:CDS | 30.0% | |
| TCAATCATCATCAGTCATAA+TGG | + | chr5.4:24381985-24382004 | MS.gene80283:intron | 30.0% | |
| TCTTAATCACTTCACTGTTT+AGG | + | chr5.4:24381220-24381239 | MS.gene80283:intron | 30.0% | |
| TCTTGCAAATAGTTTCACAA+GGG | + | chr5.4:24380855-24380874 | MS.gene80283:intron | 30.0% | |
| TGAAGGAAAAAAAAAAGCGA+GGG | - | chr5.4:24380948-24380967 | None:intergenic | 30.0% | |
| TGAATCTCATATTGGTCATA+GGG | + | chr5.4:24378847-24378866 | MS.gene80283:intron | 30.0% | |
| TGACATACTATCATCTTACT+TGG | + | chr5.4:24380605-24380624 | MS.gene80283:intron | 30.0% | |
| TTAACTCTTTGATCAGTTGT+AGG | + | chr5.4:24379143-24379162 | MS.gene80283:intron | 30.0% | |
| TTCAGATATAGCATACCAAT+AGG | - | chr5.4:24381351-24381370 | None:intergenic | 30.0% | |
| TTGAAGGAAAAAAAAAAGCG+AGG | - | chr5.4:24380949-24380968 | None:intergenic | 30.0% | |
| TTGAATCTCATATTGGTCAT+AGG | + | chr5.4:24378846-24378865 | MS.gene80283:intron | 30.0% | |
| TTGTAAAACTTGATGCCTTA+AGG | - | chr5.4:24379355-24379374 | None:intergenic | 30.0% | |
| TTTCTAACAAGACTTTGCTT+TGG | - | chr5.4:24379380-24379399 | None:intergenic | 30.0% | |
| ! | AACTTTGTTGTAATTTGCAG+GGG | + | chr5.4:24379436-24379455 | MS.gene80283:intron | 30.0% |
| ! | AGGGATAACTTTTCTAATGA+TGG | + | chr5.4:24381240-24381259 | MS.gene80283:intron | 30.0% |
| ! | CTATAACATGCTTTTCGATT+AGG | + | chr5.4:24382118-24382137 | MS.gene80283:intron | 30.0% |
| ! | CTATCTTTTCTACTGAAGAA+TGG | - | chr5.4:24380495-24380514 | None:intergenic | 30.0% |
| ! | CTTTGCACCAAATAGATTTT+AGG | - | chr5.4:24381036-24381055 | None:intergenic | 30.0% |
| ! | GAACTTTGTTGTAATTTGCA+GGG | + | chr5.4:24379435-24379454 | MS.gene80283:intron | 30.0% |
| ! | GTTAAGTTGTTTATCCAAAC+AGG | - | chr5.4:24380633-24380652 | None:intergenic | 30.0% |
| ! | TGAACTTTGTTGTAATTTGC+AGG | + | chr5.4:24379434-24379453 | MS.gene80283:intron | 30.0% |
| ! | TTTAAGATTGCGGAAAATAG+CGG | + | chr5.4:24381740-24381759 | MS.gene80283:intron | 30.0% |
| !! | ATGAAAGTATCAATTCTCTG+TGG | + | chr5.4:24378218-24378237 | MS.gene80283:intron | 30.0% |
| !! | GTATTTTTACAAAAGTGTGC+AGG | - | chr5.4:24379405-24379424 | None:intergenic | 30.0% |
| !! | GTCATCTTAGAGTTTGTTTT+AGG | - | chr5.4:24382400-24382419 | None:intergenic | 30.0% |
| !! | GTTGATTTGAAACTGCAAAA+TGG | + | chr5.4:24381956-24381975 | MS.gene80283:intron | 30.0% |
| !! | TACAGAGTGTTGTCAAATAA+CGG | - | chr5.4:24380155-24380174 | None:intergenic | 30.0% |
| !!! | AGCCCTTTTTTCTTGAATTT+AGG | + | chr5.4:24378332-24378351 | MS.gene80283:intron | 30.0% |
| !!! | GCCCTTTTTTCTTGAATTTA+GGG | + | chr5.4:24378333-24378352 | MS.gene80283:intron | 30.0% |
| !!! | TCTTATTTTCTGTATCCTCT+TGG | + | chr5.4:24382029-24382048 | MS.gene80283:intron | 30.0% |
| !!! | TTTTTTTTTCCTTCGTCATG+CGG | + | chr5.4:24381010-24381029 | MS.gene80283:intron | 30.0% |
| AAGGAAAAAAAAAAGCGAGG+GGG | - | chr5.4:24380946-24380965 | None:intergenic | 35.0% | |
| AATGTTTCTCTCACAAGACA+TGG | - | chr5.4:24378828-24378847 | None:intergenic | 35.0% | |
| AATTGTCGCCAAGTATTCAA+AGG | + | chr5.4:24381582-24381601 | MS.gene80283:CDS | 35.0% | |
| AATTGTGAAAGAACACACCT+TGG | - | chr5.4:24381645-24381664 | None:intergenic | 35.0% | |
| ACAGAACTAGTACTATGAAG+GGG | - | chr5.4:24379571-24379590 | None:intergenic | 35.0% | |
| AGTTGTAGGTTCTTTCTCAT+TGG | + | chr5.4:24379157-24379176 | MS.gene80283:intron | 35.0% | |
| ATACAAACCACTCTTGAGAA+TGG | + | chr5.4:24380318-24380337 | MS.gene80283:intron | 35.0% | |
| ATATAAAACAAGTGTGCAGC+AGG | - | chr5.4:24379978-24379997 | None:intergenic | 35.0% | |
| ATATGTAGATGGTTGCTTAG+AGG | + | chr5.4:24379877-24379896 | MS.gene80283:intron | 35.0% | |
| ATGGTTGCTTAGAGGAATTT+GGG | + | chr5.4:24379885-24379904 | MS.gene80283:intron | 35.0% | |
| ATTGTGAAAGAACACACCTT+GGG | - | chr5.4:24381644-24381663 | None:intergenic | 35.0% | |
| CAAAAACACAGTATGAGTGT+TGG | - | chr5.4:24382528-24382547 | None:intergenic | 35.0% | |
| CAAAACCTACTGCTATATCA+GGG | - | chr5.4:24381140-24381159 | None:intergenic | 35.0% | |
| CCTAACAGAAAATAGAAGTG+AGG | - | chr5.4:24380423-24380442 | None:intergenic | 35.0% | |
| CGAAATAGCATATCACAGAA+CGG | + | chr5.4:24381820-24381839 | MS.gene80283:intron | 35.0% | |
| CTCTTGCAAATAGTTTCACA+AGG | + | chr5.4:24380854-24380873 | MS.gene80283:intron | 35.0% | |
| CTGAGCTACTTAAGAACAAA+AGG | - | chr5.4:24379112-24379131 | None:intergenic | 35.0% | |
| CTTTAGCACTGTAGCATAAT+GGG | - | chr5.4:24380132-24380151 | None:intergenic | 35.0% | |
| GAAGATAAACCATTTGGTTG+AGG | - | chr5.4:24377936-24377955 | None:intergenic | 35.0% | |
| GAAGGAAAAAAAAAAGCGAG+GGG | - | chr5.4:24380947-24380966 | None:intergenic | 35.0% | |
| GCTTCATATGCATATCATTG+AGG | + | chr5.4:24381548-24381567 | MS.gene80283:CDS | 35.0% | |
| GGTTTATCTTCTGTTATTCC+TGG | + | chr5.4:24377945-24377964 | MS.gene80283:CDS | 35.0% | |
| GGTTTGTCTTTCAATGATCT+AGG | + | chr5.4:24381261-24381280 | MS.gene80283:intron | 35.0% | |
| GTGGAAAAGATTCTGTTTCA+AGG | + | chr5.4:24379476-24379495 | MS.gene80283:CDS | 35.0% | |
| TATTCGCTATTTGACAACAC+TGG | + | chr5.4:24380238-24380257 | MS.gene80283:intron | 35.0% | |
| TCAAAACCTACTGCTATATC+AGG | - | chr5.4:24381141-24381160 | None:intergenic | 35.0% | |
| TGATCAGTGTTGTCAAATAG+CGG | - | chr5.4:24381895-24381914 | None:intergenic | 35.0% | |
| TGGAATGTTGGATCATTACA+AGG | + | chr5.4:24380338-24380357 | MS.gene80283:intron | 35.0% | |
| TGGCTATCATTCTCATCAAT+AGG | - | chr5.4:24382262-24382281 | None:intergenic | 35.0% | |
| TTCTCATCAATAGGATTCAC+CGG | - | chr5.4:24382253-24382272 | None:intergenic | 35.0% | |
| TTGAAAAGTTACGCAAGGAA+TGG | - | chr5.4:24380373-24380392 | None:intergenic | 35.0% | |
| TTGAAGTCTTCTTTCTTTGC+AGG | + | chr5.4:24381098-24381117 | MS.gene80283:intron | 35.0% | |
| TTGGTTGAATATGCATATGC+TGG | + | chr5.4:24379294-24379313 | MS.gene80283:intron | 35.0% | |
| TTTAGAAGCAATTGCTCTCT+TGG | - | chr5.4:24382640-24382659 | None:intergenic | 35.0% | |
| TTTATGCTTTGCTCAACTGA+GGG | + | chr5.4:24382205-24382224 | MS.gene80283:CDS | 35.0% | |
| TTTCAGCTTTCAACCTCAAA+AGG | - | chr5.4:24378799-24378818 | None:intergenic | 35.0% | |
| TTTGTTCTTAAGTAGCTCAG+TGG | + | chr5.4:24379112-24379131 | MS.gene80283:intron | 35.0% | |
| ! | CCTCACTTCTATTTTCTGTT+AGG | + | chr5.4:24380420-24380439 | MS.gene80283:intron | 35.0% |
| ! | GAAGTAGATCTTCGAGATTT+TGG | + | chr5.4:24379325-24379344 | MS.gene80283:intron | 35.0% |
| ! | GGACACATTTTCATCAATCA+AGG | + | chr5.4:24378486-24378505 | MS.gene80283:intron | 35.0% |
| ! | GTGTTTTGCAGAGTGTAAAT+GGG | - | chr5.4:24381681-24381700 | None:intergenic | 35.0% |
| ! | GTTTTGTAGTCAGCAACATA+TGG | + | chr5.4:24379608-24379627 | MS.gene80283:intron | 35.0% |
| ! | TCTAGGAGTTGCATTTTTGA+AGG | + | chr5.4:24381278-24381297 | MS.gene80283:intron | 35.0% |
| ! | TGATATAGCAGTAGGTTTTG+AGG | + | chr5.4:24381140-24381159 | MS.gene80283:CDS | 35.0% |
| ! | TGTGTTTTGCAGAGTGTAAA+TGG | - | chr5.4:24381682-24381701 | None:intergenic | 35.0% |
| ! | TTTTATGCTTTGCTCAACTG+AGG | + | chr5.4:24382204-24382223 | MS.gene80283:CDS | 35.0% |
| ! | TTTTCAAAAAGCTCTTGAGC+AGG | - | chr5.4:24381456-24381475 | None:intergenic | 35.0% |
| ! | TTTTGCTCTTCAAGATGGAT+TGG | + | chr5.4:24378403-24378422 | MS.gene80283:intron | 35.0% |
| ! | TTTTTCCCTGATATAGCAGT+AGG | + | chr5.4:24381132-24381151 | MS.gene80283:CDS | 35.0% |
| !! | ATATGGCAAGGTTCTTGTTT+TGG | + | chr5.4:24379625-24379644 | MS.gene80283:CDS | 35.0% |
| !! | CGTGTTTTTATAAGTTGTCC+TGG | + | chr5.4:24380771-24380790 | MS.gene80283:intron | 35.0% |
| !! | TTCTGTTAGGTTTTGGTCAT+TGG | + | chr5.4:24380433-24380452 | MS.gene80283:intron | 35.0% |
| !! | TTTTGTTTCAGTGGGATGAT+TGG | + | chr5.4:24382181-24382200 | MS.gene80283:intron | 35.0% |
| !!! | AGTTTGTTTTAGGCCTCATT+AGG | - | chr5.4:24382390-24382409 | None:intergenic | 35.0% |
| !!! | CGAGATTTTGGTTTTCCTTA+AGG | + | chr5.4:24379337-24379356 | MS.gene80283:intron | 35.0% |
| !!! | GTTTGTTTTAGGCCTCATTA+GGG | - | chr5.4:24382389-24382408 | None:intergenic | 35.0% |
| !!! | TCAAATACCTTTTTGGGGTT+TGG | - | chr5.4:24379728-24379747 | None:intergenic | 35.0% |
| !!! | TGAAAAGCCCTTTTTTGAGT+CGG | + | chr5.4:24381470-24381489 | MS.gene80283:CDS | 35.0% |
| !!! | TTTTGTTGTTTGTTGGGTCA+TGG | + | chr5.4:24378128-24378147 | MS.gene80283:intron | 35.0% |
| !!! | TTTTTTCCTTCAAGTTGGGT+GGG | + | chr5.4:24380956-24380975 | MS.gene80283:intron | 35.0% |
| !!! | TTTTTTTCCTTCAAGTTGGG+TGG | + | chr5.4:24380955-24380974 | MS.gene80283:intron | 35.0% |
| AAAAGACCCACAAACAAGTC+AGG | - | chr5.4:24382500-24382519 | None:intergenic | 40.0% | |
| AATATGTGGAAAGGATCGCA+GGG | - | chr5.4:24381706-24381725 | None:intergenic | 40.0% | |
| AATGACAAATCATGGGGACT+GGG | - | chr5.4:24379224-24379243 | None:intergenic | 40.0% | |
| ACAGCAGCACTATAATGTAG+TGG | - | chr5.4:24380219-24380238 | None:intergenic | 40.0% | |
| ACTGCATCATAAGTTCCTTC+TGG | - | chr5.4:24381309-24381328 | None:intergenic | 40.0% | |
| AGGAAAAAAAAAAGCGAGGG+GGG | - | chr5.4:24380945-24380964 | None:intergenic | 40.0% | |
| ATATGTCGAAGAGAGTAGGA+AGG | + | chr5.4:24380267-24380286 | MS.gene80283:intron | 40.0% | |
| ATGAGTGATCATCTCTTGGT+AGG | - | chr5.4:24379687-24379706 | None:intergenic | 40.0% | |
| ATTGCTCTCTTGGCAAAAGA+TGG | - | chr5.4:24382630-24382649 | None:intergenic | 40.0% | |
| CAACATTCCATTCTCAAGAG+TGG | - | chr5.4:24380328-24380347 | None:intergenic | 40.0% | |
| CACTCTTGAGAATGGAATGT+TGG | + | chr5.4:24380326-24380345 | MS.gene80283:intron | 40.0% | |
| CATGCGGCCTAAAATCTATT+TGG | + | chr5.4:24381026-24381045 | MS.gene80283:intron | 40.0% | |
| CCAAAAGAACCTCAACCAAA+TGG | + | chr5.4:24377924-24377943 | MS.gene80283:CDS | 40.0% | |
| CCACGTGTGACACTTAATAT+CGG | + | chr5.4:24381165-24381184 | MS.gene80283:CDS | 40.0% | |
| CGTTACAGTGTTGTCAATCT+CGG | + | chr5.4:24380078-24380097 | MS.gene80283:intron | 40.0% | |
| CTCAATTCCAAACCCCAAAA+AGG | + | chr5.4:24379718-24379737 | MS.gene80283:CDS | 40.0% | |
| CTGTATGAAATCACGTCTCA+CGG | + | chr5.4:24380170-24380189 | MS.gene80283:intron | 40.0% | |
| GAAGATCAACTACCTCACAA+CGG | + | chr5.4:24377885-24377904 | MS.gene80283:CDS | 40.0% | |
| GAAGATGAGTGATCATCTCT+TGG | - | chr5.4:24379691-24379710 | None:intergenic | 40.0% | |
| GATGGTTGCTTAGAGGAATT+TGG | + | chr5.4:24379884-24379903 | MS.gene80283:intron | 40.0% | |
| GATTGTTAGCTGATGTGGTT+TGG | + | chr5.4:24378169-24378188 | MS.gene80283:intron | 40.0% | |
| GCTTTAGCACTGTAGCATAA+TGG | - | chr5.4:24380133-24380152 | None:intergenic | 40.0% | |
| GCTTTAGTGACATAGGACTT+AGG | + | chr5.4:24382469-24382488 | MS.gene80283:intron | 40.0% | |
| GTGGATTCATCTGATCCTAT+TGG | + | chr5.4:24381333-24381352 | MS.gene80283:CDS | 40.0% | |
| GTTACAGTGTTGTCAATCTC+GGG | + | chr5.4:24380079-24380098 | MS.gene80283:intron | 40.0% | |
| TAATATGTGGAAAGGATCGC+AGG | - | chr5.4:24381707-24381726 | None:intergenic | 40.0% | |
| TAATGACAAATCATGGGGAC+TGG | - | chr5.4:24379225-24379244 | None:intergenic | 40.0% | |
| TATCTTCTGTTATTCCTGGC+TGG | + | chr5.4:24377949-24377968 | MS.gene80283:CDS | 40.0% | |
| TATGTTTGGATGGAGGGTTT+AGG | + | chr5.4:24378896-24378915 | MS.gene80283:intron | 40.0% | |
| TATTGGTCATAGGGTGAAAG+TGG | + | chr5.4:24378856-24378875 | MS.gene80283:intron | 40.0% | |
| TCTTCTCTTTGCCTCTTCAA+GGG | - | chr5.4:24377855-24377874 | None:intergenic | 40.0% | |
| TGACAGAGCCTTTGAATACT+TGG | - | chr5.4:24381593-24381612 | None:intergenic | 40.0% | |
| TTATGCTTTGCTCAACTGAG+GGG | + | chr5.4:24382206-24382225 | MS.gene80283:CDS | 40.0% | |
| TTCGCTGCAAACATTTGGTA+TGG | + | chr5.4:24379263-24379282 | MS.gene80283:intron | 40.0% | |
| TTCTTCTCTTTGCCTCTTCA+AGG | - | chr5.4:24377856-24377875 | None:intergenic | 40.0% | |
| ! | AACAAGGGCTTTAGTGACAT+AGG | + | chr5.4:24382462-24382481 | MS.gene80283:intron | 40.0% |
| ! | CCATTTGGTTGAGGTTCTTT+TGG | - | chr5.4:24377927-24377946 | None:intergenic | 40.0% |
| ! | CTTGCAACCGACTCAAAAAA+GGG | - | chr5.4:24381480-24381499 | None:intergenic | 40.0% |
| ! | TGGTATAGTGTCACCTTTTG+AGG | + | chr5.4:24378783-24378802 | MS.gene80283:intron | 40.0% |
| ! | TTTGTTGTAATTTGCAGGGG+AGG | + | chr5.4:24379439-24379458 | MS.gene80283:intron | 40.0% |
| ! | TTTTAGGCCTCATTAGGGTT+TGG | - | chr5.4:24382384-24382403 | None:intergenic | 40.0% |
| !! | ATTTTCAGGGTCTGTTTCAG+AGG | - | chr5.4:24379082-24379101 | None:intergenic | 40.0% |
| !! | TCTCTGAAATTAGCCCAATG+TGG | + | chr5.4:24377973-24377992 | MS.gene80283:CDS | 40.0% |
| !! | TGTTAGGTTTTGGTCATTGG+TGG | + | chr5.4:24380436-24380455 | MS.gene80283:intron | 40.0% |
| !! | TTTTCAGGGTCTGTTTCAGA+GGG | - | chr5.4:24379081-24379100 | None:intergenic | 40.0% |
| !!! | CAAGGTTCTTGTTTTGGATG+GGG | + | chr5.4:24379631-24379650 | MS.gene80283:CDS | 40.0% |
| !!! | CTTTTTTGAGTCGGTTGCAA+GGG | + | chr5.4:24381479-24381498 | MS.gene80283:CDS | 40.0% |
| !!! | GCAAGGTTCTTGTTTTGGAT+GGG | + | chr5.4:24379630-24379649 | MS.gene80283:CDS | 40.0% |
| !!! | TAAGGGAAGTTTTGGGGTAA+GGG | - | chr5.4:24382348-24382367 | None:intergenic | 40.0% |
| AAAACGAACCAGGCCACATT+GGG | - | chr5.4:24377989-24378008 | None:intergenic | 45.0% | |
| AAAGTGGTGATTGAACTCCG+AGG | + | chr5.4:24378872-24378891 | MS.gene80283:intron | 45.0% | |
| AAGGCTCTGTCAACTATGCT+TGG | + | chr5.4:24381601-24381620 | MS.gene80283:CDS | 45.0% | |
| AAGGGAAAATCTGTGGACTC+AGG | - | chr5.4:24377837-24377856 | None:intergenic | 45.0% | |
| AAGTGGTGATTGAACTCCGA+GGG | + | chr5.4:24378873-24378892 | MS.gene80283:intron | 45.0% | |
| AGAACACACCTTGGGTATGT+AGG | - | chr5.4:24381636-24381655 | None:intergenic | 45.0% | |
| CACGCTTGAAAAGTTACGCA+AGG | - | chr5.4:24380378-24380397 | None:intergenic | 45.0% | |
| CATCTTACTTGGGTCCTGTT+TGG | + | chr5.4:24380616-24380635 | MS.gene80283:intron | 45.0% | |
| CCGATATTAAGTGTCACACG+TGG | - | chr5.4:24381168-24381187 | None:intergenic | 45.0% | |
| CCTCTTCAAGGGAAAATCTG+TGG | - | chr5.4:24377844-24377863 | None:intergenic | 45.0% | |
| CTAATTTCAGAGAACCAGCC+AGG | - | chr5.4:24377966-24377985 | None:intergenic | 45.0% | |
| CTCTTGGAGACCAATTGTGT+TGG | + | chr5.4:24382045-24382064 | MS.gene80283:intron | 45.0% | |
| GCAAACAGAAAGCTGCTGAA+TGG | - | chr5.4:24382608-24382627 | None:intergenic | 45.0% | |
| GCAGAGTGTAAATGGGAAAG+TGG | - | chr5.4:24381674-24381693 | None:intergenic | 45.0% | |
| GCTATAGAATTGTCGCAGAG+CGG | - | chr5.4:24381778-24381797 | None:intergenic | 45.0% | |
| GGAAAAAAAAAAGCGAGGGG+GGG | - | chr5.4:24380944-24380963 | None:intergenic | 45.0% | |
| GGTCATTCAGCTCACAGAAA+GGG | + | chr5.4:24379652-24379671 | MS.gene80283:CDS | 45.0% | |
| GTAGTCAGCAACATATGGCA+AGG | + | chr5.4:24379613-24379632 | MS.gene80283:intron | 45.0% | |
| GTGACACTTAATATCGGCGA+TGG | + | chr5.4:24381171-24381190 | MS.gene80283:CDS | 45.0% | |
| GTGATGAGAGAAAACGAACC+AGG | - | chr5.4:24377999-24378018 | None:intergenic | 45.0% | |
| GTTCTTAAGTAGCTCAGTGG+TGG | + | chr5.4:24379115-24379134 | MS.gene80283:intron | 45.0% | |
| TAACTGAAGCTGCATGTACC+TGG | - | chr5.4:24379532-24379551 | None:intergenic | 45.0% | |
| TAGTGACATAGGACTTAGGC+CGG | + | chr5.4:24382473-24382492 | MS.gene80283:intron | 45.0% | |
| TCAGGATGTTATGGTCTTCC+AGG | + | chr5.4:24379511-24379530 | MS.gene80283:CDS | 45.0% | |
| TCTCGGGATGTGGAAAATAG+TGG | + | chr5.4:24380095-24380114 | MS.gene80283:intron | 45.0% | |
| TGTCAACTATGCTTGGACCA+CGG | + | chr5.4:24381608-24381627 | MS.gene80283:CDS | 45.0% | |
| TTTCAGGGTCTGTTTCAGAG+GGG | - | chr5.4:24379080-24379099 | None:intergenic | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+GGG | + | chr5.4:24378900-24378919 | MS.gene80283:intron | 45.0% | |
| ! | AGCGCAGTGTGAGTTTTCAA+GGG | + | chr5.4:24378611-24378630 | MS.gene80283:intron | 45.0% |
| ! | CAACACAATTGGTCTCCAAG+AGG | - | chr5.4:24382047-24382066 | None:intergenic | 45.0% |
| ! | CAACGCTAAGGGAAGTTTTG+GGG | - | chr5.4:24382354-24382373 | None:intergenic | 45.0% |
| ! | CCAACGCTAAGGGAAGTTTT+GGG | - | chr5.4:24382355-24382374 | None:intergenic | 45.0% |
| ! | CCACAGATTTTCCCTTGAAG+AGG | + | chr5.4:24377841-24377860 | MS.gene80283:CDS | 45.0% |
| ! | CCTTGCAACCGACTCAAAAA+AGG | - | chr5.4:24381481-24381500 | None:intergenic | 45.0% |
| ! | GCCTCATTAGGGTTTGGTTT+GGG | - | chr5.4:24382378-24382397 | None:intergenic | 45.0% |
| ! | GGGTTTGGAATTGAGCAAAG+AGG | - | chr5.4:24379713-24379732 | None:intergenic | 45.0% |
| ! | GTACTCAGGCGGAAAGTATA+TGG | + | chr5.4:24381526-24381545 | MS.gene80283:CDS | 45.0% |
| ! | TTCGGTCGATTTCAAGCATC+CGG | + | chr5.4:24382231-24382250 | MS.gene80283:CDS | 45.0% |
| ! | TTGAACTCCGAGGGTATGTT+TGG | + | chr5.4:24378882-24378901 | MS.gene80283:intron | 45.0% |
| !! | TAGGTTTTGGTCATTGGTGG+AGG | + | chr5.4:24380439-24380458 | MS.gene80283:intron | 45.0% |
| !! | TTTTTGAAGGCAGCTCCAGA+AGG | + | chr5.4:24381291-24381310 | MS.gene80283:CDS | 45.0% |
| !!! | CCTTTTTTGAGTCGGTTGCA+AGG | + | chr5.4:24381478-24381497 | MS.gene80283:CDS | 45.0% |
| !!! | CTAAGGGAAGTTTTGGGGTA+AGG | - | chr5.4:24382349-24382368 | None:intergenic | 45.0% |
| !!! | GGCAAGGTTCTTGTTTTGGA+TGG | + | chr5.4:24379629-24379648 | MS.gene80283:CDS | 45.0% |
| !! | TAAAAAAAATTAACATAAAA+GGG | - | chr5.4:24378373-24378392 | None:intergenic | 5.0% |
| !! | TTAAAAAAAATTAACATAAA+AGG | - | chr5.4:24378374-24378393 | None:intergenic | 5.0% |
| !!! | TTATTATTATTTTTTTGTTT+AGG | + | chr5.4:24381429-24381448 | MS.gene80283:intron | 5.0% |
| ACCCACAAACAAGTCAGGAC+CGG | - | chr5.4:24382495-24382514 | None:intergenic | 50.0% | |
| ATCTGTGGACTCAGGAAGTG+TGG | - | chr5.4:24377829-24377848 | None:intergenic | 50.0% | |
| CACGTCTCACGGAGTAATAG+TGG | + | chr5.4:24380181-24380200 | MS.gene80283:intron | 50.0% | |
| CCCAAAACTTCCCTTAGCGT+TGG | + | chr5.4:24382352-24382371 | MS.gene80283:intron | 50.0% | |
| CCTCCATCCAAACATACCCT+CGG | - | chr5.4:24378892-24378911 | None:intergenic | 50.0% | |
| GAAAACGAACCAGGCCACAT+TGG | - | chr5.4:24377990-24378009 | None:intergenic | 50.0% | |
| GAAATTAGCCCAATGTGGCC+TGG | + | chr5.4:24377978-24377997 | MS.gene80283:CDS | 50.0% | |
| GAGAATGATAGCCAGCATGC+AGG | + | chr5.4:24382268-24382287 | MS.gene80283:CDS | 50.0% | |
| GAGATACCCACCCAACTTGA+AGG | - | chr5.4:24380965-24380984 | None:intergenic | 50.0% | |
| GCCCAAACCAAACCCTAATG+AGG | + | chr5.4:24382374-24382393 | MS.gene80283:intron | 50.0% | |
| GGATGCTTGAAATCGACCGA+AGG | - | chr5.4:24382232-24382251 | None:intergenic | 50.0% | |
| GGGTCATTCAGCTCACAGAA+AGG | + | chr5.4:24379651-24379670 | MS.gene80283:CDS | 50.0% | |
| GTGTTGTCAATCTCGGGATG+TGG | + | chr5.4:24380085-24380104 | MS.gene80283:intron | 50.0% | |
| GTTTCAGAGACACCGTTGTG+AGG | - | chr5.4:24377900-24377919 | None:intergenic | 50.0% | |
| GTTTGGATGGAGGGTTTAGG+AGG | + | chr5.4:24378899-24378918 | MS.gene80283:intron | 50.0% | |
| TCAATGGTCTTCCTGCATGC+TGG | - | chr5.4:24382282-24382301 | None:intergenic | 50.0% | |
| TGAGTACACACAACACCTCC+TGG | - | chr5.4:24381513-24381532 | None:intergenic | 50.0% | |
| TTCAGGGTCTGTTTCAGAGG+GGG | - | chr5.4:24379079-24379098 | None:intergenic | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | + | chr5.4:24378901-24378920 | MS.gene80283:intron | 50.0% | |
| TTGGTCATTGGTGGAGGAGA+TGG | + | chr5.4:24380445-24380464 | MS.gene80283:CDS | 50.0% | |
| ! | ACTCCGAGGGTATGTTTGGA+TGG | + | chr5.4:24378886-24378905 | MS.gene80283:intron | 50.0% |
| ! | AGGTGTTGTGTGTACTCAGG+CGG | + | chr5.4:24381515-24381534 | MS.gene80283:CDS | 50.0% |
| ! | CAGCGCAGTGTGAGTTTTCA+AGG | + | chr5.4:24378610-24378629 | MS.gene80283:intron | 50.0% |
| ! | CGAGGGTATGTTTGGATGGA+GGG | + | chr5.4:24378890-24378909 | MS.gene80283:intron | 50.0% |
| ! | GATTTTAGGCCGCATGACGA+AGG | - | chr5.4:24381022-24381041 | None:intergenic | 50.0% |
| ! | GCCAACGCTAAGGGAAGTTT+TGG | - | chr5.4:24382356-24382375 | None:intergenic | 50.0% |
| ! | GGCCTCATTAGGGTTTGGTT+TGG | - | chr5.4:24382379-24382398 | None:intergenic | 50.0% |
| ! | TCTGTTTCAGAGGGGGGTTT+TGG | - | chr5.4:24379072-24379091 | None:intergenic | 50.0% |
| !! | AGGAGGTGTTGTGTGTACTC+AGG | + | chr5.4:24381512-24381531 | MS.gene80283:CDS | 50.0% |
| !! | TTGGTTTGGGCCAACGCTAA+GGG | - | chr5.4:24382365-24382384 | None:intergenic | 50.0% |
| !! | TTTGGTTTGGGCCAACGCTA+AGG | - | chr5.4:24382366-24382385 | None:intergenic | 50.0% |
| !!! | TTTCAGAGGGGGGTTTTGGA+TGG | - | chr5.4:24379068-24379087 | None:intergenic | 50.0% |
| AAAAAAAGCGAGGGGGGGAG+AGG | - | chr5.4:24380939-24380958 | None:intergenic | 55.0% | |
| AATGGCGTGAAACTTCCCGC+AGG | - | chr5.4:24380477-24380496 | None:intergenic | 55.0% | |
| AGCAGGAGTTAGCACGGTGA+CGG | - | chr5.4:24379961-24379980 | None:intergenic | 55.0% | |
| AGGGGAGGCTCACTCATTGA+AGG | + | chr5.4:24379454-24379473 | MS.gene80283:intron | 55.0% | |
| CCACGGTTCCTACATACCCA+AGG | + | chr5.4:24381625-24381644 | MS.gene80283:CDS | 55.0% | |
| CCTTGGGTATGTAGGAACCG+TGG | - | chr5.4:24381628-24381647 | None:intergenic | 55.0% | |
| GGAGAGGCAGACTGAGACTA+GGG | - | chr5.4:24380923-24380942 | None:intergenic | 55.0% | |
| GGAGGCTCACTCATTGAAGG+TGG | + | chr5.4:24379457-24379476 | MS.gene80283:CDS | 55.0% | |
| GTCATTGGTGGAGGAGATGG+AGG | + | chr5.4:24380448-24380467 | MS.gene80283:CDS | 55.0% | |
| GTGTGCAGCAGGAGTTAGCA+CGG | - | chr5.4:24379967-24379986 | None:intergenic | 55.0% | |
| TCAGGGTCTGTTTCAGAGGG+GGG | - | chr5.4:24379078-24379097 | None:intergenic | 55.0% | |
| TGGATGGAGGGTTTAGGAGG+GGG | + | chr5.4:24378902-24378921 | MS.gene80283:intron | 55.0% | |
| TTGCTCAACTGAGGGGCCTT+CGG | + | chr5.4:24382213-24382232 | MS.gene80283:CDS | 55.0% | |
| ! | CCGAGGGTATGTTTGGATGG+AGG | + | chr5.4:24378889-24378908 | MS.gene80283:intron | 55.0% |
| !! | GCCGGTCCTGACTTGTTTGT+GGG | + | chr5.4:24382491-24382510 | MS.gene80283:intron | 55.0% |
| AGGAGATGGAGGAGTCCTGC+GGG | + | chr5.4:24380459-24380478 | MS.gene80283:CDS | 60.0% | |
| GAGGAGATGGAGGAGTCCTG+CGG | + | chr5.4:24380458-24380477 | MS.gene80283:CDS | 60.0% | |
| GCAGGAGTTAGCACGGTGAC+GGG | - | chr5.4:24379960-24379979 | None:intergenic | 60.0% | |
| GGGAGAGGCAGACTGAGACT+AGG | - | chr5.4:24380924-24380943 | None:intergenic | 60.0% | |
| GTTGCAAGGGCTCTTCGTCC+AGG | + | chr5.4:24381492-24381511 | MS.gene80283:CDS | 60.0% | |
| !! | GGCCGGTCCTGACTTGTTTG+TGG | + | chr5.4:24382490-24382509 | MS.gene80283:intron | 60.0% |
| GCAAGGGCTCTTCGTCCAGG+AGG | + | chr5.4:24381495-24381514 | MS.gene80283:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 24377804 | 24382668 | 24377804 | ID=MS.gene80283 |
| chr5.4 | mRNA | 24377804 | 24382668 | 24377804 | ID=MS.gene80283.t1;Parent=MS.gene80283 |
| chr5.4 | exon | 24377804 | 24377999 | 24377804 | ID=MS.gene80283.t1.exon1;Parent=MS.gene80283.t1 |
| chr5.4 | CDS | 24377804 | 24377999 | 24377804 | ID=cds.MS.gene80283.t1;Parent=MS.gene80283.t1 |
| chr5.4 | exon | 24379456 | 24379532 | 24379456 | ID=MS.gene80283.t1.exon2;Parent=MS.gene80283.t1 |
| chr5.4 | CDS | 24379456 | 24379532 | 24379456 | ID=cds.MS.gene80283.t1;Parent=MS.gene80283.t1 |
| chr5.4 | exon | 24379617 | 24379739 | 24379617 | ID=MS.gene80283.t1.exon3;Parent=MS.gene80283.t1 |
| chr5.4 | CDS | 24379617 | 24379739 | 24379617 | ID=cds.MS.gene80283.t1;Parent=MS.gene80283.t1 |
| chr5.4 | exon | 24380442 | 24380546 | 24380442 | ID=MS.gene80283.t1.exon4;Parent=MS.gene80283.t1 |
| chr5.4 | CDS | 24380442 | 24380546 | 24380442 | ID=cds.MS.gene80283.t1;Parent=MS.gene80283.t1 |
| chr5.4 | exon | 24381120 | 24381192 | 24381120 | ID=MS.gene80283.t1.exon5;Parent=MS.gene80283.t1 |
| chr5.4 | CDS | 24381120 | 24381192 | 24381120 | ID=cds.MS.gene80283.t1;Parent=MS.gene80283.t1 |
| chr5.4 | exon | 24381283 | 24381354 | 24381283 | ID=MS.gene80283.t1.exon6;Parent=MS.gene80283.t1 |
| chr5.4 | CDS | 24381283 | 24381354 | 24381283 | ID=cds.MS.gene80283.t1;Parent=MS.gene80283.t1 |
| chr5.4 | exon | 24381451 | 24381646 | 24381451 | ID=MS.gene80283.t1.exon7;Parent=MS.gene80283.t1 |
| chr5.4 | CDS | 24381451 | 24381646 | 24381451 | ID=cds.MS.gene80283.t1;Parent=MS.gene80283.t1 |
| chr5.4 | exon | 24382192 | 24382318 | 24382192 | ID=MS.gene80283.t1.exon8;Parent=MS.gene80283.t1 |
| chr5.4 | CDS | 24382192 | 24382318 | 24382192 | ID=cds.MS.gene80283.t1;Parent=MS.gene80283.t1 |
| chr5.4 | exon | 24382603 | 24382668 | 24382603 | ID=MS.gene80283.t1.exon9;Parent=MS.gene80283.t1 |
| chr5.4 | CDS | 24382603 | 24382668 | 24382603 | ID=cds.MS.gene80283.t1;Parent=MS.gene80283.t1 |
| Gene Sequence |
| Protein sequence |
