Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91150.t1 | XP_003589825.2 | 96.2 | 398 | 15 | 0 | 1 | 398 | 1 | 398 | 2.20E-212 | 748 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91150.t1 | Q2NI00 | 41.2 | 371 | 184 | 9 | 49 | 398 | 2 | 359 | 5.9e-65 | 249.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91150.t1 | G7IDE5 | 96.2 | 398 | 15 | 0 | 1 | 398 | 1 | 398 | 1.6e-212 | 748.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049195 | MS.gene91150 | 0.803652 | 3.15E-49 | -1.69E-46 |
| MS.gene049260 | MS.gene91150 | 0.804676 | 1.93E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene91150 | 0.825773 | 3.91E-54 | -1.69E-46 |
| MS.gene049351 | MS.gene91150 | 0.801146 | 1.03E-48 | -1.69E-46 |
| MS.gene049758 | MS.gene91150 | 0.868943 | 4.48E-66 | -1.69E-46 |
| MS.gene050301 | MS.gene91150 | 0.857704 | 1.36E-62 | -1.69E-46 |
| MS.gene050319 | MS.gene91150 | -0.810749 | 9.87E-51 | -1.69E-46 |
| MS.gene050330 | MS.gene91150 | -0.838253 | 3.21E-57 | -1.69E-46 |
| MS.gene050438 | MS.gene91150 | 0.818078 | 2.36E-52 | -1.69E-46 |
| MS.gene050558 | MS.gene91150 | 0.860581 | 1.87E-63 | -1.69E-46 |
| MS.gene050560 | MS.gene91150 | 0.829872 | 4.04E-55 | -1.69E-46 |
| MS.gene050787 | MS.gene91150 | 0.833766 | 4.42E-56 | -1.69E-46 |
| MS.gene05119 | MS.gene91150 | -0.839758 | 1.31E-57 | -1.69E-46 |
| MS.gene051662 | MS.gene91150 | 0.827032 | 1.96E-54 | -1.69E-46 |
| MS.gene051663 | MS.gene91150 | 0.850767 | 1.37E-60 | -1.69E-46 |
| MS.gene051860 | MS.gene91150 | 0.847907 | 8.59E-60 | -1.69E-46 |
| MS.gene052207 | MS.gene91150 | 0.851924 | 6.46E-61 | -1.69E-46 |
| MS.gene053836 | MS.gene91150 | 0.888151 | 7.61E-73 | -1.69E-46 |
| MS.gene054473 | MS.gene91150 | 0.866936 | 1.98E-65 | -1.69E-46 |
| MS.gene05455 | MS.gene91150 | 0.809582 | 1.76E-50 | -1.69E-46 |
| MS.gene054942 | MS.gene91150 | 0.854214 | 1.43E-61 | -1.69E-46 |
| MS.gene054983 | MS.gene91150 | 0.806005 | 1.01E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene91150 | 0.833646 | 4.73E-56 | -1.69E-46 |
| MS.gene055303 | MS.gene91150 | 0.837688 | 4.48E-57 | -1.69E-46 |
| MS.gene055390 | MS.gene91150 | 0.842568 | 2.39E-58 | -1.69E-46 |
| MS.gene055422 | MS.gene91150 | 0.858163 | 9.95E-63 | -1.69E-46 |
| MS.gene055428 | MS.gene91150 | 0.848948 | 4.42E-60 | -1.69E-46 |
| MS.gene055712 | MS.gene91150 | 0.812382 | 4.36E-51 | -1.69E-46 |
| MS.gene055816 | MS.gene91150 | -0.800989 | 1.11E-48 | -1.69E-46 |
| MS.gene056069 | MS.gene91150 | -0.805048 | 1.61E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene91150 | 0.809271 | 2.05E-50 | -1.69E-46 |
| MS.gene056875 | MS.gene91150 | 0.824753 | 6.80E-54 | -1.69E-46 |
| MS.gene057121 | MS.gene91150 | 0.860427 | 2.08E-63 | -1.69E-46 |
| MS.gene057245 | MS.gene91150 | 0.861943 | 7.19E-64 | -1.69E-46 |
| MS.gene057260 | MS.gene91150 | 0.81094 | 8.98E-51 | -1.69E-46 |
| MS.gene057439 | MS.gene91150 | 0.818953 | 1.50E-52 | -1.69E-46 |
| MS.gene057469 | MS.gene91150 | 0.854005 | 1.64E-61 | -1.69E-46 |
| MS.gene058002 | MS.gene91150 | 0.833582 | 4.91E-56 | -1.69E-46 |
| MS.gene05811 | MS.gene91150 | 0.852795 | 3.65E-61 | -1.69E-46 |
| MS.gene05907 | MS.gene91150 | 0.825383 | 4.83E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene91150 | 0.817517 | 3.16E-52 | -1.69E-46 |
| MS.gene05984 | MS.gene91150 | 0.827839 | 1.25E-54 | -1.69E-46 |
| MS.gene060559 | MS.gene91150 | 0.802188 | 6.32E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene91150 | 0.815265 | 1.01E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91150.t1 | MTR_1g039990 | 96.231 | 398 | 15 | 0 | 1 | 398 | 1 | 398 | 0.0 | 772 |
| MS.gene91150.t1 | MTR_0804s0020 | 85.000 | 60 | 9 | 0 | 1 | 60 | 1 | 60 | 2.09e-26 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91150.t1 | AT3G28760 | 70.255 | 353 | 103 | 1 | 47 | 397 | 91 | 443 | 0.0 | 522 |
| MS.gene91150.t1 | AT3G28760 | 70.255 | 353 | 103 | 1 | 47 | 397 | 69 | 421 | 0.0 | 521 |
Find 80 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGCCTTCTTCTTCTTCT+TGG | 0.101742 | 1.3:+22717968 | MS.gene91150:CDS |
| TGCTAGTGAGAAGGATATTT+TGG | 0.180793 | 1.3:+22719247 | MS.gene91150:CDS |
| TTTGGATGCACAAAATAAAA+AGG | 0.273689 | 1.3:+22719265 | MS.gene91150:CDS |
| AATCAAAGAAAGTGTGGATA+TGG | 0.301157 | 1.3:+22718019 | MS.gene91150:CDS |
| CACGCCTACATTGCTGTTCC+AGG | 0.323371 | 1.3:+22721257 | MS.gene91150:CDS |
| CATTGCTTTCTTCTGTTCTT+CGG | 0.350670 | 1.3:-22720533 | None:intergenic |
| AGTGATTGTGGTTGATCAAC+AGG | 0.351036 | 1.3:+22721322 | MS.gene91150:CDS |
| TTCTTCTTCTTGGACACCAT+TGG | 0.354356 | 1.3:+22717978 | MS.gene91150:CDS |
| ATGTCTTTACTGTCGCAAAT+TGG | 0.354779 | 1.3:+22717880 | MS.gene91150:CDS |
| TTCCTCAACTTGCCAATGAT+TGG | 0.356737 | 1.3:+22718112 | MS.gene91150:CDS |
| AGATGGCAAATACAGTCTTT+TGG | 0.378386 | 1.3:-22720228 | None:intergenic |
| TGAGCCTATTCTTGAGCTTA+AGG | 0.383726 | 1.3:+22720428 | MS.gene91150:CDS |
| AAATTCTTGAATCTCTATTC+CGG | 0.391166 | 1.3:-22723228 | None:intergenic |
| CAAATTCAAGTTGCTGGAAT+GGG | 0.397178 | 1.3:+22720585 | MS.gene91150:CDS |
| GCACTTGAACATGGCTTAGA+TGG | 0.408508 | 1.3:+22720381 | MS.gene91150:CDS |
| TGGACACCATTGGAGGATAC+TGG | 0.409798 | 1.3:+22717988 | MS.gene91150:CDS |
| AATTTGTGTCACAGTGGCTT+TGG | 0.410779 | 1.3:-22720568 | None:intergenic |
| GTGACACAAATTCAAGTTGC+TGG | 0.412213 | 1.3:+22720579 | MS.gene91150:CDS |
| TTTGCCTCCACAAGGATTAG+TGG | 0.415111 | 1.3:-22721392 | None:intergenic |
| TTGTAGTTAATTTACTTGAT+TGG | 0.425623 | 1.3:+22719363 | MS.gene91150:CDS |
| GAAGAAGGCATTGAAGAAGA+AGG | 0.427373 | 1.3:-22717958 | None:intergenic |
| AGTTAATTTACTTGATTGGC+AGG | 0.445134 | 1.3:+22719367 | MS.gene91150:CDS |
| CGGCAAAGAATTGCAATTGT+TGG | 0.452724 | 1.3:+22721347 | MS.gene91150:CDS |
| ACAAATTGAATTACCTTGTA+CGG | 0.452777 | 1.3:-22723058 | None:intergenic |
| TCTTGTTCATTCAGAATGCT+TGG | 0.454670 | 1.3:+22720763 | MS.gene91150:CDS |
| CTCAAGAAATGTCTGAGCTT+CGG | 0.461769 | 1.3:-22720263 | None:intergenic |
| CCAGTGACATCACTAAAAGT+TGG | 0.464939 | 1.3:+22723164 | MS.gene91150:CDS |
| TACCTGTCAGAATTAAAATC+AGG | 0.467479 | 1.3:+22721293 | MS.gene91150:CDS |
| CAAGTTGAGGAAGGTGAGAT+GGG | 0.470330 | 1.3:-22718101 | None:intergenic |
| TAAAATACATGACCAATCAT+TGG | 0.473391 | 1.3:-22718124 | None:intergenic |
| ACAGCAATGTAGGCGTGAAC+TGG | 0.479131 | 1.3:-22721251 | None:intergenic |
| GCAAGTTGAGGAAGGTGAGA+TGG | 0.481357 | 1.3:-22718102 | None:intergenic |
| TTCTTCTTGGACACCATTGG+AGG | 0.485849 | 1.3:+22717981 | MS.gene91150:CDS |
| GCTTTAGTTTGTCCCGTACA+AGG | 0.485966 | 1.3:+22723045 | MS.gene91150:CDS |
| AAACGTGTGTTGGAAGTAGA+AGG | 0.486239 | 1.3:-22717925 | None:intergenic |
| ACAAATTCAAGTTGCTGGAA+TGG | 0.489970 | 1.3:+22720584 | MS.gene91150:CDS |
| TTGTTACCAGTATCCTCCAA+TGG | 0.499727 | 1.3:-22717994 | None:intergenic |
| AAGAAGGCATTGAAGAAGAA+GGG | 0.500932 | 1.3:-22717957 | None:intergenic |
| CAAATTGAATTACCTTGTAC+GGG | 0.507264 | 1.3:-22723057 | None:intergenic |
| AGGTAGGATGTTCTACCGCC+TGG | 0.514003 | 1.3:-22721275 | None:intergenic |
| TAGGTTGGATCCTTTGCTAG+AGG | 0.519842 | 1.3:+22720734 | MS.gene91150:intron |
| CTAAGTCGTTCTAGTTCCTC+CGG | 0.524065 | 1.3:-22719314 | None:intergenic |
| CTCTGCAGTCTTATGAGACC+TGG | 0.525874 | 1.3:+22720627 | MS.gene91150:CDS |
| ACTAATCCTTGTGGAGGCAA+AGG | 0.534041 | 1.3:+22721394 | MS.gene91150:CDS |
| CGGCAGCTGTTGAAAGAGGA+TGG | 0.535360 | 1.3:+22718064 | MS.gene91150:CDS |
| CTTACCGCATTCACCCGAAA+AGG | 0.538390 | 1.3:-22720809 | None:intergenic |
| ATCAGGAAAAGAAGTGATTG+TGG | 0.556374 | 1.3:+22721310 | MS.gene91150:CDS |
| CAAGGAGGGGCTCGACATAC+CGG | 0.557488 | 1.3:+22723209 | MS.gene91150:CDS |
| AAGAAATAATCCTCTAGCAA+AGG | 0.559960 | 1.3:-22720744 | None:intergenic |
| CACAAACCTTTGCCTCCACA+AGG | 0.562034 | 1.3:-22721400 | None:intergenic |
| ATCACCTTAAGCTCAAGAAT+AGG | 0.564561 | 1.3:-22720432 | None:intergenic |
| GACCAATCATTGGCAAGTTG+AGG | 0.569625 | 1.3:-22718114 | None:intergenic |
| TTCGGATGCATTATCAGAGA+TGG | 0.570257 | 1.3:-22720245 | None:intergenic |
| AAATTCAAGTTGCTGGAATG+GGG | 0.571305 | 1.3:+22720586 | MS.gene91150:CDS |
| ATGACGGCAGCTGTTGAAAG+AGG | 0.575603 | 1.3:+22718060 | MS.gene91150:CDS |
| TTCTATTGAGAATACAAGGA+GGG | 0.587874 | 1.3:+22723195 | MS.gene91150:CDS |
| GTCTACTTTCTATCTTTACA+CGG | 0.590915 | 1.3:-22721370 | None:intergenic |
| CGAAGCTCAGACATTTCTTG+AGG | 0.591185 | 1.3:+22720264 | MS.gene91150:CDS |
| AAAGAACAAGCAGGTTATGA+CGG | 0.597208 | 1.3:+22718044 | MS.gene91150:CDS |
| GGTGTCCAAGAAGAAGAAGA+AGG | 0.608969 | 1.3:-22717973 | None:intergenic |
| GAAGTTCTATTGAGAATACA+AGG | 0.609646 | 1.3:+22723191 | MS.gene91150:CDS |
| AATCATTGGCAAGTTGAGGA+AGG | 0.609879 | 1.3:-22718110 | None:intergenic |
| ACCGCCTGGAACAGCAATGT+AGG | 0.611914 | 1.3:-22721261 | None:intergenic |
| TCTATTGAGAATACAAGGAG+GGG | 0.613333 | 1.3:+22723196 | MS.gene91150:CDS |
| GTTGTGACGCAAACGTGTGT+TGG | 0.621291 | 1.3:-22717935 | None:intergenic |
| AAGTAGACCACTAATCCTTG+TGG | 0.623475 | 1.3:+22721385 | MS.gene91150:CDS |
| AATTCAAGTTGCTGGAATGG+GGG | 0.626295 | 1.3:+22720587 | MS.gene91150:CDS |
| GTGTTGGAAGTAGAAGGTGG+TGG | 0.630075 | 1.3:-22717919 | None:intergenic |
| AAGAGGACAGATGACTGCAA+TGG | 0.637867 | 1.3:-22719222 | None:intergenic |
| TTGTGGTTGATCAACAGGGT+CGG | 0.642420 | 1.3:+22721327 | MS.gene91150:CDS |
| AGTCTTATGAGACCTGGTGA+AGG | 0.644139 | 1.3:+22720633 | MS.gene91150:CDS |
| CATACGAGAAGTCCTTCACC+AGG | 0.653315 | 1.3:-22720645 | None:intergenic |
| GATATGGACAAAGAACAAGC+AGG | 0.656378 | 1.3:+22718035 | MS.gene91150:CDS |
| GTGATTGTGGTTGATCAACA+GGG | 0.670264 | 1.3:+22721323 | MS.gene91150:CDS |
| TAGACCACTAATCCTTGTGG+AGG | 0.673279 | 1.3:+22721388 | MS.gene91150:CDS |
| GCCTACATTGCTGTTCCAGG+CGG | 0.679259 | 1.3:+22721260 | MS.gene91150:CDS |
| AACTTGAATTTGTGTCACAG+TGG | 0.683036 | 1.3:-22720574 | None:intergenic |
| GTTCTATTGAGAATACAAGG+AGG | 0.709797 | 1.3:+22723194 | MS.gene91150:CDS |
| ACTAGAACGACTTAGACCTG+AGG | 0.735230 | 1.3:+22719322 | MS.gene91150:CDS |
| CGTGTGTTGGAAGTAGAAGG+TGG | 0.751214 | 1.3:-22717922 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTAAAATAGTTAAAAATA+TGG | - | chr1.3:22722516-22722535 | None:intergenic | 10.0% |
| !!! | TATTTAGTCTTTAAAATTTT+AGG | + | chr1.3:22718739-22718758 | MS.gene91150:intron | 10.0% |
| !!! | TTAGTTTTTAAAAATGTTAA+TGG | + | chr1.3:22722197-22722216 | MS.gene91150:intron | 10.0% |
| !! | AAACGATGTAAAAAATTATA+CGG | - | chr1.3:22722329-22722348 | None:intergenic | 15.0% |
| !! | AATTATCTGAATTTGAAAAT+AGG | + | chr1.3:22722648-22722667 | MS.gene91150:intron | 15.0% |
| !! | AGATTAAAATGAAAAACAAA+AGG | - | chr1.3:22718908-22718927 | None:intergenic | 15.0% |
| !! | ATTAAAATGAAAAACAAAAG+GGG | - | chr1.3:22718906-22718925 | None:intergenic | 15.0% |
| !! | GATTAAAATGAAAAACAAAA+GGG | - | chr1.3:22718907-22718926 | None:intergenic | 15.0% |
| !! | TACATTATTGAAATTGAAAA+TGG | - | chr1.3:22720128-22720147 | None:intergenic | 15.0% |
| !!! | AAATATTTTCCAATAACTAA+TGG | - | chr1.3:22721429-22721448 | None:intergenic | 15.0% |
| !!! | CAAAAAAACAAATTCTAAAA+AGG | - | chr1.3:22721477-22721496 | None:intergenic | 15.0% |
| !!! | CAATTGGATTTAAAATATAA+TGG | - | chr1.3:22718174-22718193 | None:intergenic | 15.0% |
| !!! | CTTTTGCTTATATTTTATAA+TGG | - | chr1.3:22721863-22721882 | None:intergenic | 15.0% |
| !!! | GATTTAAAATATAATGGAAA+GGG | - | chr1.3:22718168-22718187 | None:intergenic | 15.0% |
| !!! | TTTTATGATATTTGGAATTT+TGG | + | chr1.3:22719183-22719202 | MS.gene91150:intron | 15.0% |
| !! | AAATAATGAATTCAAAACCA+TGG | + | chr1.3:22722594-22722613 | MS.gene91150:intron | 20.0% |
| !! | AAATCACTATTGAAAAACAA+TGG | - | chr1.3:22721597-22721616 | None:intergenic | 20.0% |
| !! | AAATGGAAACAAATAACAAA+AGG | - | chr1.3:22718214-22718233 | None:intergenic | 20.0% |
| !! | AAATTAACCAAATACTTAAG+TGG | + | chr1.3:22718784-22718803 | MS.gene91150:intron | 20.0% |
| !! | AATAATGAATTCAAAACCAT+GGG | + | chr1.3:22722595-22722614 | MS.gene91150:intron | 20.0% |
| !! | AATGGAAACAAATAACAAAA+GGG | - | chr1.3:22718213-22718232 | None:intergenic | 20.0% |
| !! | AGGTATATAAATATTAGTAG+GGG | + | chr1.3:22720284-22720303 | MS.gene91150:intron | 20.0% |
| !! | ATCTTGAGATACAATTAATA+AGG | - | chr1.3:22721731-22721750 | None:intergenic | 20.0% |
| !! | ATTATAAATAATGAGACAGA+GGG | - | chr1.3:22721664-22721683 | None:intergenic | 20.0% |
| !! | GAGGTATATAAATATTAGTA+GGG | + | chr1.3:22720283-22720302 | MS.gene91150:intron | 20.0% |
| !! | GATGAAATTTAAACACAAAA+TGG | - | chr1.3:22718231-22718250 | None:intergenic | 20.0% |
| !! | TAATGTGATACTAAAACAAT+TGG | - | chr1.3:22718190-22718209 | None:intergenic | 20.0% |
| !! | TATTATAAATAATGAGACAG+AGG | - | chr1.3:22721665-22721684 | None:intergenic | 20.0% |
| !! | TCTTGAGATACAATTAATAA+GGG | - | chr1.3:22721730-22721749 | None:intergenic | 20.0% |
| !! | TGAGGTATATAAATATTAGT+AGG | + | chr1.3:22720282-22720301 | MS.gene91150:intron | 20.0% |
| !! | TTGTAGTTAATTTACTTGAT+TGG | + | chr1.3:22719363-22719382 | MS.gene91150:CDS | 20.0% |
| !!! | ATTTTTCTTTTCCATTGATT+TGG | - | chr1.3:22722631-22722650 | None:intergenic | 20.0% |
| !!! | GGATTTAAAATATAATGGAA+AGG | - | chr1.3:22718169-22718188 | None:intergenic | 20.0% |
| !!! | TTAATTTGTTGATACATGAT+TGG | + | chr1.3:22719004-22719023 | MS.gene91150:intron | 20.0% |
| ! | AAACAAGGAAAACTAATCTA+AGG | - | chr1.3:22719624-22719643 | None:intergenic | 25.0% |
| ! | AAACAGTAAGATGAATAGTT+AGG | - | chr1.3:22721755-22721774 | None:intergenic | 25.0% |
| ! | AAATTCTTGAATCTCTATTC+CGG | - | chr1.3:22723231-22723250 | None:intergenic | 25.0% |
| ! | AACAAGGAAATATGGATTTA+TGG | - | chr1.3:22722484-22722503 | None:intergenic | 25.0% |
| ! | AACAGTCAAAAACTTTCTTT+AGG | + | chr1.3:22720715-22720734 | MS.gene91150:intron | 25.0% |
| ! | AAGATGAATGTTTGATGTTA+TGG | + | chr1.3:22721166-22721185 | MS.gene91150:intron | 25.0% |
| ! | ACAAAAAATCAAAGAAAGTG+TGG | + | chr1.3:22718013-22718032 | MS.gene91150:CDS | 25.0% |
| ! | ACAAATTGAATTACCTTGTA+CGG | - | chr1.3:22723061-22723080 | None:intergenic | 25.0% |
| ! | ACTTTCAGTTTAAATCTTTC+AGG | + | chr1.3:22720500-22720519 | MS.gene91150:intron | 25.0% |
| ! | AGATTTAAACTGAAAGTAAG+AGG | - | chr1.3:22720497-22720516 | None:intergenic | 25.0% |
| ! | ATAATGAATTCAAAACCATG+GGG | + | chr1.3:22722596-22722615 | MS.gene91150:intron | 25.0% |
| ! | ATTGAAGTCTTCAATTACAT+TGG | + | chr1.3:22718815-22718834 | MS.gene91150:intron | 25.0% |
| ! | ATTTAACTCTGAATTTCATC+AGG | - | chr1.3:22722716-22722735 | None:intergenic | 25.0% |
| ! | GATTTATGGTGTAAAAAACA+CGG | - | chr1.3:22722470-22722489 | None:intergenic | 25.0% |
| ! | TAAAAAGGATACTTATGAGA+CGG | - | chr1.3:22721462-22721481 | None:intergenic | 25.0% |
| ! | TAAAATACATGACCAATCAT+TGG | - | chr1.3:22718127-22718146 | None:intergenic | 25.0% |
| ! | TAAAGACAACTAGAAATAGA+TGG | - | chr1.3:22722859-22722878 | None:intergenic | 25.0% |
| ! | TAATTAGTGGAAAAGATGAT+TGG | + | chr1.3:22722293-22722312 | MS.gene91150:intron | 25.0% |
| ! | TCAAACAAAATTGATGTACT+TGG | - | chr1.3:22721926-22721945 | None:intergenic | 25.0% |
| ! | TGATTTGAACAAATCACTAT+TGG | + | chr1.3:22721611-22721630 | MS.gene91150:intron | 25.0% |
| ! | TGTAAAAAACACGGAAATAT+GGG | - | chr1.3:22722461-22722480 | None:intergenic | 25.0% |
| ! | TTTAACTCTGAATTTCATCA+GGG | - | chr1.3:22722715-22722734 | None:intergenic | 25.0% |
| ! | TTTGGATGCACAAAATAAAA+AGG | + | chr1.3:22719265-22719284 | MS.gene91150:CDS | 25.0% |
| ! | TTTGTGTATCCATTAGTTAT+TGG | + | chr1.3:22721417-22721436 | MS.gene91150:intron | 25.0% |
| !! | AAATAGAGTTTGAGTTATGT+TGG | + | chr1.3:22719063-22719082 | MS.gene91150:intron | 25.0% |
| !! | AATCATCTTTTCCACTAATT+AGG | - | chr1.3:22722294-22722313 | None:intergenic | 25.0% |
| !! | ACTTTTATTGTAATGAACTC+CGG | - | chr1.3:22719104-22719123 | None:intergenic | 25.0% |
| !! | CATTCATAAGGAAGATATTT+TGG | + | chr1.3:22718962-22718981 | MS.gene91150:intron | 25.0% |
| !! | GATGTACTTGGTTTAAAATT+TGG | - | chr1.3:22721914-22721933 | None:intergenic | 25.0% |
| !! | TATTACTACCAATTTTCTGA+GGG | + | chr1.3:22720016-22720035 | MS.gene91150:intron | 25.0% |
| !! | TGGAAATGTTTTTCACATTT+AGG | + | chr1.3:22719024-22719043 | MS.gene91150:intron | 25.0% |
| !! | TTAGCAATATTTTCATAGTG+TGG | + | chr1.3:22722876-22722895 | MS.gene91150:intron | 25.0% |
| !! | TTATTACTACCAATTTTCTG+AGG | + | chr1.3:22720015-22720034 | MS.gene91150:intron | 25.0% |
| !!! | AAGTTTTTGACTGTTAAGAA+TGG | - | chr1.3:22720710-22720729 | None:intergenic | 25.0% |
| !!! | AGTCTTTAAAATTTTAGGAG+AGG | + | chr1.3:22718744-22718763 | MS.gene91150:intron | 25.0% |
| !!! | ATATTGATTCAGCAAAAACA+AGG | - | chr1.3:22719639-22719658 | None:intergenic | 25.0% |
| !!! | ATGAAATTTTTTAGTTGCTG+TGG | - | chr1.3:22722560-22722579 | None:intergenic | 25.0% |
| !!! | TCAAAGAAAGTTGATGTATT+TGG | + | chr1.3:22721887-22721906 | MS.gene91150:intron | 25.0% |
| !!! | TTACTGTTTTTGTCAAATAG+CGG | + | chr1.3:22721766-22721785 | MS.gene91150:intron | 25.0% |
| !!! | TTTGAGCAATTTTCAAGTAT+CGG | + | chr1.3:22719743-22719762 | MS.gene91150:intron | 25.0% |
| AACACTAAGTAGAAACACAA+TGG | - | chr1.3:22718253-22718272 | None:intergenic | 30.0% | |
| AACGGTTTATTTCCTGAATA+GGG | - | chr1.3:22723131-22723150 | None:intergenic | 30.0% | |
| AAGAAATAATCCTCTAGCAA+AGG | - | chr1.3:22720747-22720766 | None:intergenic | 30.0% | |
| AATACTCAAGAAGCTTCAAA+TGG | - | chr1.3:22720465-22720484 | None:intergenic | 30.0% | |
| ACAAATTTGATCCAATGTCT+TGG | + | chr1.3:22718934-22718953 | MS.gene91150:intron | 30.0% | |
| ACCAGTTACTTGTAATAACA+GGG | + | chr1.3:22721227-22721246 | MS.gene91150:intron | 30.0% | |
| ACTACACATGTCATATCTAT+AGG | - | chr1.3:22718399-22718418 | None:intergenic | 30.0% | |
| ACTTTCTACTTGAAGAAATG+TGG | + | chr1.3:22720055-22720074 | MS.gene91150:intron | 30.0% | |
| AGATGTAAGAGAACTTGAAA+TGG | + | chr1.3:22722807-22722826 | MS.gene91150:intron | 30.0% | |
| AGTTAATTTACTTGATTGGC+AGG | + | chr1.3:22719367-22719386 | MS.gene91150:CDS | 30.0% | |
| ATGATGCTAGAGTGAAAATA+AGG | - | chr1.3:22722384-22722403 | None:intergenic | 30.0% | |
| ATGTCATATCTATAGGCAAT+GGG | - | chr1.3:22718392-22718411 | None:intergenic | 30.0% | |
| ATGTGGTTGTTTATATTTGC+TGG | + | chr1.3:22720072-22720091 | MS.gene91150:intron | 30.0% | |
| ATTACAAGTAACTGGTGAAA+AGG | - | chr1.3:22721223-22721242 | None:intergenic | 30.0% | |
| ATTCATCATAGAGTTTCTCT+TGG | - | chr1.3:22721200-22721219 | None:intergenic | 30.0% | |
| ATTTCTATGACAACTATCCA+AGG | - | chr1.3:22718690-22718709 | None:intergenic | 30.0% | |
| CAAATTGAATTACCTTGTAC+GGG | - | chr1.3:22723060-22723079 | None:intergenic | 30.0% | |
| GAAGTTCTATTGAGAATACA+AGG | + | chr1.3:22723191-22723210 | MS.gene91150:CDS | 30.0% | |
| GAGTTTGTAAGTGTAATACA+TGG | - | chr1.3:22722743-22722762 | None:intergenic | 30.0% | |
| GGAGTTCATTACAATAAAAG+TGG | + | chr1.3:22719103-22719122 | MS.gene91150:intron | 30.0% | |
| GTCAAAAACTTTCTTTAGGT+TGG | + | chr1.3:22720719-22720738 | MS.gene91150:intron | 30.0% | |
| GTCTACTTTCTATCTTTACA+CGG | - | chr1.3:22721373-22721392 | None:intergenic | 30.0% | |
| GTGTAAAAAACACGGAAATA+TGG | - | chr1.3:22722462-22722481 | None:intergenic | 30.0% | |
| TAACAATGTAGTTAGTGACA+AGG | - | chr1.3:22722058-22722077 | None:intergenic | 30.0% | |
| TAACGGTTTATTTCCTGAAT+AGG | - | chr1.3:22723132-22723151 | None:intergenic | 30.0% | |
| TAATGAATTCAAAACCATGG+GGG | + | chr1.3:22722597-22722616 | MS.gene91150:intron | 30.0% | |
| TACCTGTCAGAATTAAAATC+AGG | + | chr1.3:22721293-22721312 | MS.gene91150:CDS | 30.0% | |
| TATGGGTGCAGTTAAAAATA+TGG | - | chr1.3:22722444-22722463 | None:intergenic | 30.0% | |
| TCACAAACCACTTAAGTATT+TGG | - | chr1.3:22718794-22718813 | None:intergenic | 30.0% | |
| TCTAGACACAGAATAATCAA+CGG | - | chr1.3:22719842-22719861 | None:intergenic | 30.0% | |
| TGAAAATTCAGCTTTCATTG+TGG | + | chr1.3:22718581-22718600 | MS.gene91150:intron | 30.0% | |
| TTCTATTGAGAATACAAGGA+GGG | + | chr1.3:22723195-22723214 | MS.gene91150:CDS | 30.0% | |
| TTGTAAGTGTAATACATGGT+GGG | - | chr1.3:22722739-22722758 | None:intergenic | 30.0% | |
| TTTCTATGACAACTATCCAA+GGG | - | chr1.3:22718689-22718708 | None:intergenic | 30.0% | |
| TTTGTAAGTGTAATACATGG+TGG | - | chr1.3:22722740-22722759 | None:intergenic | 30.0% | |
| ! | AATCAAAGAAAGTGTGGATA+TGG | + | chr1.3:22718019-22718038 | MS.gene91150:CDS | 30.0% |
| ! | ATTGTGTTTCTACTTAGTGT+TGG | + | chr1.3:22718252-22718271 | MS.gene91150:intron | 30.0% |
| ! | CTCGTATGTATTCATTTTGA+TGG | + | chr1.3:22720660-22720679 | MS.gene91150:intron | 30.0% |
| ! | CTTTTGCTTATGTCTTGTAA+TGG | + | chr1.3:22721950-22721969 | MS.gene91150:intron | 30.0% |
| ! | TGTTTCTTATGTGTTCTAGA+AGG | - | chr1.3:22721512-22721531 | None:intergenic | 30.0% |
| ! | TTGCAACCTTTGAATTTTGT+AGG | + | chr1.3:22720359-22720378 | MS.gene91150:intron | 30.0% |
| !! | CAATGGTGAGTTGATTAATT+AGG | - | chr1.3:22721580-22721599 | None:intergenic | 30.0% |
| !! | GCTATTTTCATAAGCTATCT+TGG | - | chr1.3:22720991-22721010 | None:intergenic | 30.0% |
| !! | TTAACCAAACTAGTCTTTCA+TGG | + | chr1.3:22721105-22721124 | MS.gene91150:intron | 30.0% |
| !! | TTGGTGATTTTGAATTTTGC+CGG | + | chr1.3:22719082-22719101 | MS.gene91150:intron | 30.0% |
| !! | TTTTGAAGGTAGGAACATAA+GGG | - | chr1.3:22722252-22722271 | None:intergenic | 30.0% |
| !! | TTTTTGAAGGTAGGAACATA+AGG | - | chr1.3:22722253-22722272 | None:intergenic | 30.0% |
| !!! | ACTGGAAAAGCTGTTTTTAA+CGG | - | chr1.3:22723149-22723168 | None:intergenic | 30.0% |
| !!! | CTTTAAAATTTTAGGAGAGG+AGG | + | chr1.3:22718747-22718766 | MS.gene91150:intron | 30.0% |
| !!! | TAAGGAAGTTTGGTTTTTGA+AGG | - | chr1.3:22722266-22722285 | None:intergenic | 30.0% |
| !!! | TGATTTTAATTCTGACAGGT+AGG | - | chr1.3:22721294-22721313 | None:intergenic | 30.0% |
| !!! | TTCCTGATTTTAATTCTGAC+AGG | - | chr1.3:22721298-22721317 | None:intergenic | 30.0% |
| AAAGAACAAGCAGGTTATGA+CGG | + | chr1.3:22718044-22718063 | MS.gene91150:CDS | 35.0% | |
| AACTTGAATTTGTGTCACAG+TGG | - | chr1.3:22720577-22720596 | None:intergenic | 35.0% | |
| AAGCTATCTTGGAGACTTTA+TGG | - | chr1.3:22720980-22720999 | None:intergenic | 35.0% | |
| AATATGGATCGCAGAAAACA+AGG | - | chr1.3:22722500-22722519 | None:intergenic | 35.0% | |
| AATGAATTCAAAACCATGGG+GGG | + | chr1.3:22722598-22722617 | MS.gene91150:intron | 35.0% | |
| ACTCAAATTTCGCAATTAGG+AGG | - | chr1.3:22718309-22718328 | None:intergenic | 35.0% | |
| AGGAACATAAGGGTTAGATA+AGG | - | chr1.3:22722242-22722261 | None:intergenic | 35.0% | |
| AGTGTCTCATATAGTCCTTA+CGG | + | chr1.3:22719441-22719460 | MS.gene91150:intron | 35.0% | |
| ATCACCTTAAGCTCAAGAAT+AGG | - | chr1.3:22720435-22720454 | None:intergenic | 35.0% | |
| ATCAGGAAAAGAAGTGATTG+TGG | + | chr1.3:22721310-22721329 | MS.gene91150:CDS | 35.0% | |
| ATGTCTTTACTGTCGCAAAT+TGG | + | chr1.3:22717880-22717899 | MS.gene91150:CDS | 35.0% | |
| ATTCAAAGGTTGCAACTGTA+AGG | - | chr1.3:22720354-22720373 | None:intergenic | 35.0% | |
| CAAGTGCCTACAAAATTCAA+AGG | - | chr1.3:22720368-22720387 | None:intergenic | 35.0% | |
| CACCAGTTACTTGTAATAAC+AGG | + | chr1.3:22721226-22721245 | MS.gene91150:intron | 35.0% | |
| CATCAAACATTCATCTTCCA+AGG | - | chr1.3:22721163-22721182 | None:intergenic | 35.0% | |
| CATGTCATATCTATAGGCAA+TGG | - | chr1.3:22718393-22718412 | None:intergenic | 35.0% | |
| CATTAGCTAGTCCTTAAAGA+TGG | - | chr1.3:22719806-22719825 | None:intergenic | 35.0% | |
| CATTGCTTTCTTCTGTTCTT+CGG | - | chr1.3:22720536-22720555 | None:intergenic | 35.0% | |
| CTAACTCAACCATACAAAAC+CGG | - | chr1.3:22718456-22718475 | None:intergenic | 35.0% | |
| GATGACTTACTCTATTGTGA+TGG | + | chr1.3:22722406-22722425 | MS.gene91150:intron | 35.0% | |
| GCAACTCAAATTTCGCAATT+AGG | - | chr1.3:22718312-22718331 | None:intergenic | 35.0% | |
| GGAACATAAGGGTTAGATAA+GGG | - | chr1.3:22722241-22722260 | None:intergenic | 35.0% | |
| GTAAGAGAACTTGAAATGGA+TGG | + | chr1.3:22722811-22722830 | MS.gene91150:intron | 35.0% | |
| GTCTTGGAATGACATTCATA+AGG | + | chr1.3:22718950-22718969 | MS.gene91150:intron | 35.0% | |
| GTGTAGTGTTTGTAAAGCTT+GGG | + | chr1.3:22718412-22718431 | MS.gene91150:intron | 35.0% | |
| GTTCTATTGAGAATACAAGG+AGG | + | chr1.3:22723194-22723213 | MS.gene91150:CDS | 35.0% | |
| TCCACTAATTAGGAGTGATA+AGG | - | chr1.3:22722284-22722303 | None:intergenic | 35.0% | |
| TCCCTGTTATTACAAGTAAC+TGG | - | chr1.3:22721231-22721250 | None:intergenic | 35.0% | |
| TCCTTATCACTCCTAATTAG+TGG | + | chr1.3:22722280-22722299 | MS.gene91150:intron | 35.0% | |
| TCGCAGAAAACAAGGAAATA+TGG | - | chr1.3:22722492-22722511 | None:intergenic | 35.0% | |
| TCTATTGAGAATACAAGGAG+GGG | + | chr1.3:22723196-22723215 | MS.gene91150:CDS | 35.0% | |
| TCTTGTTCATTCAGAATGCT+TGG | + | chr1.3:22720763-22720782 | MS.gene91150:CDS | 35.0% | |
| TGAATGTCATTCCAAGACAT+TGG | - | chr1.3:22718948-22718967 | None:intergenic | 35.0% | |
| TGGAAATTCTGCTTTCATTG+CGG | + | chr1.3:22718272-22718291 | MS.gene91150:intron | 35.0% | |
| TGTACTAACGAGCAACAAAA+GGG | - | chr1.3:22721821-22721840 | None:intergenic | 35.0% | |
| TGTCGAAACGTCAAAAATTG+TGG | - | chr1.3:22719294-22719313 | None:intergenic | 35.0% | |
| TGTGCAGAATCTTAAAAGAC+AGG | + | chr1.3:22722149-22722168 | MS.gene91150:intron | 35.0% | |
| TGTGTAGTGTTTGTAAAGCT+TGG | + | chr1.3:22718411-22718430 | MS.gene91150:intron | 35.0% | |
| TTAGGAGTGATAAGGAAGTT+TGG | - | chr1.3:22722276-22722295 | None:intergenic | 35.0% | |
| TTCAAACGACTTTCAAGCAT+TGG | - | chr1.3:22719471-22719490 | None:intergenic | 35.0% | |
| TTCTATGACAACTATCCAAG+GGG | - | chr1.3:22718688-22718707 | None:intergenic | 35.0% | |
| TTGCTTATGTCTTGTAATGG+AGG | + | chr1.3:22721953-22721972 | MS.gene91150:intron | 35.0% | |
| TTGTACTAACGAGCAACAAA+AGG | - | chr1.3:22721822-22721841 | None:intergenic | 35.0% | |
| TTTGGCGATAGTAAAATGCT+TGG | + | chr1.3:22718980-22718999 | MS.gene91150:intron | 35.0% | |
| ! | AATTTTTGACGTTTCGACAC+CGG | + | chr1.3:22719295-22719314 | MS.gene91150:CDS | 35.0% |
| ! | AGATGGCAAATACAGTCTTT+TGG | - | chr1.3:22720231-22720250 | None:intergenic | 35.0% |
| ! | ATTTTGTAGGCACTTGAACA+TGG | + | chr1.3:22720372-22720391 | MS.gene91150:intron | 35.0% |
| ! | GCAGCAATTATATTTTCTGC+AGG | - | chr1.3:22720196-22720215 | None:intergenic | 35.0% |
| ! | TCTAAAATGATATCAGAGCC+TGG | + | chr1.3:22718489-22718508 | MS.gene91150:intron | 35.0% |
| ! | TGCTAGTGAGAAGGATATTT+TGG | + | chr1.3:22719247-22719266 | MS.gene91150:CDS | 35.0% |
| ! | TGCTTATGTCTTGTAATGGA+GGG | + | chr1.3:22721954-22721973 | MS.gene91150:intron | 35.0% |
| ! | TTGAAGCTTCTTGAGTATTG+AGG | + | chr1.3:22720466-22720485 | MS.gene91150:intron | 35.0% |
| !! | AAATTCAAGTTGCTGGAATG+GGG | + | chr1.3:22720586-22720605 | MS.gene91150:CDS | 35.0% |
| !! | AAGAAGGCATTGAAGAAGAA+GGG | - | chr1.3:22717960-22717979 | None:intergenic | 35.0% |
| !! | AAGTTATTTTCTCACCCGTA+AGG | + | chr1.3:22719664-22719683 | MS.gene91150:intron | 35.0% |
| !! | AATATTAGTAGGGGTGTTAC+AGG | + | chr1.3:22720293-22720312 | MS.gene91150:intron | 35.0% |
| !! | ACAAATTCAAGTTGCTGGAA+TGG | + | chr1.3:22720584-22720603 | MS.gene91150:CDS | 35.0% |
| !! | ATACAGTCTTTTGGCTGTTT+TGG | - | chr1.3:22720222-22720241 | None:intergenic | 35.0% |
| !! | ATTTGGAATTTTGGCCATGA+TGG | + | chr1.3:22719192-22719211 | MS.gene91150:intron | 35.0% |
| !! | CAAATTCAAGTTGCTGGAAT+GGG | + | chr1.3:22720585-22720604 | MS.gene91150:CDS | 35.0% |
| !! | CATCTTTAAGGACTAGCTAA+TGG | + | chr1.3:22719804-22719823 | MS.gene91150:intron | 35.0% |
| !! | TGGTGAGTTGATTAATTAGG+TGG | - | chr1.3:22721577-22721596 | None:intergenic | 35.0% |
| !! | TTTTAGTTGCTGTGGATTGA+TGG | - | chr1.3:22722552-22722571 | None:intergenic | 35.0% |
| !!! | GAAGTTTGGTTTTTGAAGGT+AGG | - | chr1.3:22722262-22722281 | None:intergenic | 35.0% |
| AAACGTGTGTTGGAAGTAGA+AGG | - | chr1.3:22717928-22717947 | None:intergenic | 40.0% | |
| AACCAGTGCAGAGATTATGA+AGG | - | chr1.3:22718643-22718662 | None:intergenic | 40.0% | |
| AAGGATACTTATGAGACGGA+TGG | - | chr1.3:22721458-22721477 | None:intergenic | 40.0% | |
| AAGGGTTAGATAAGGGATTG+TGG | - | chr1.3:22722234-22722253 | None:intergenic | 40.0% | |
| AAGTAGACCACTAATCCTTG+TGG | + | chr1.3:22721385-22721404 | MS.gene91150:CDS | 40.0% | |
| AATGGATGGACGAAGTAAGA+TGG | + | chr1.3:22722825-22722844 | MS.gene91150:intron | 40.0% | |
| AATTTCGCAATTAGGAGGCT+AGG | - | chr1.3:22718304-22718323 | None:intergenic | 40.0% | |
| AATTTGTGTCACAGTGGCTT+TGG | - | chr1.3:22720571-22720590 | None:intergenic | 40.0% | |
| ACTCAAGAAGCTTCAAATGG+AGG | - | chr1.3:22720462-22720481 | None:intergenic | 40.0% | |
| AGCCTAAAGTATGGACAATG+CGG | - | chr1.3:22718534-22718553 | None:intergenic | 40.0% | |
| AGTGATTGTGGTTGATCAAC+AGG | + | chr1.3:22721322-22721341 | MS.gene91150:CDS | 40.0% | |
| AGTTTGAGCCAGAGAATTGA+AGG | - | chr1.3:22720840-22720859 | None:intergenic | 40.0% | |
| ATAGCGGCGTTATAAAGTAG+CGG | + | chr1.3:22721782-22721801 | MS.gene91150:intron | 40.0% | |
| ATTTCGCAATTAGGAGGCTA+GGG | - | chr1.3:22718303-22718322 | None:intergenic | 40.0% | |
| CAATGCCTTCTTCTTCTTCT+TGG | + | chr1.3:22717968-22717987 | MS.gene91150:CDS | 40.0% | |
| CAGAATAATCAACGGATGAC+AGG | - | chr1.3:22719834-22719853 | None:intergenic | 40.0% | |
| CCAGTGACATCACTAAAAGT+TGG | + | chr1.3:22723164-22723183 | MS.gene91150:CDS | 40.0% | |
| CCTTAAAGATGGCAAATGCT+GGG | - | chr1.3:22719795-22719814 | None:intergenic | 40.0% | |
| CGGCAAAGAATTGCAATTGT+TGG | + | chr1.3:22721347-22721366 | MS.gene91150:CDS | 40.0% | |
| CTCAAGAAATGTCTGAGCTT+CGG | - | chr1.3:22720266-22720285 | None:intergenic | 40.0% | |
| CTCATCTTCCCTCAGAAAAT+TGG | - | chr1.3:22720027-22720046 | None:intergenic | 40.0% | |
| CTTAAAGATGGCAAATGCTG+GGG | - | chr1.3:22719794-22719813 | None:intergenic | 40.0% | |
| GAACCAATGAGCCTAAAGTA+TGG | - | chr1.3:22718543-22718562 | None:intergenic | 40.0% | |
| GACTTACTCTATTGTGATGG+TGG | + | chr1.3:22722409-22722428 | MS.gene91150:intron | 40.0% | |
| GATATGGACAAAGAACAAGC+AGG | + | chr1.3:22718035-22718054 | MS.gene91150:CDS | 40.0% | |
| GTGATTGTGGTTGATCAACA+GGG | + | chr1.3:22721323-22721342 | MS.gene91150:CDS | 40.0% | |
| TCAATCGCAGAAAATAGCAG+CGG | - | chr1.3:22722033-22722052 | None:intergenic | 40.0% | |
| TCCAACACCTTCACTATGTT+GGG | + | chr1.3:22718345-22718364 | MS.gene91150:intron | 40.0% | |
| TCCTTAAAGATGGCAAATGC+TGG | - | chr1.3:22719796-22719815 | None:intergenic | 40.0% | |
| TCCTTCTCACTAGCAAAAAG+AGG | - | chr1.3:22719242-22719261 | None:intergenic | 40.0% | |
| TGAGCCTATTCTTGAGCTTA+AGG | + | chr1.3:22720428-22720447 | MS.gene91150:CDS | 40.0% | |
| TGTCCATACTTTAGGCTCAT+TGG | + | chr1.3:22718537-22718556 | MS.gene91150:intron | 40.0% | |
| TGTTGTCTGTTTCCCTATTC+AGG | + | chr1.3:22723116-22723135 | MS.gene91150:intron | 40.0% | |
| TTCCTCAACTTGCCAATGAT+TGG | + | chr1.3:22718112-22718131 | MS.gene91150:CDS | 40.0% | |
| TTCGGATGCATTATCAGAGA+TGG | - | chr1.3:22720248-22720267 | None:intergenic | 40.0% | |
| TTCTTCTTCTTGGACACCAT+TGG | + | chr1.3:22717978-22717997 | MS.gene91150:CDS | 40.0% | |
| TTGTACACAATTGCTCACTC+AGG | + | chr1.3:22720165-22720184 | MS.gene91150:intron | 40.0% | |
| TTGTTACCAGTATCCTCCAA+TGG | - | chr1.3:22717997-22718016 | None:intergenic | 40.0% | |
| TTTAGGAGAGGAGGAACAAT+TGG | + | chr1.3:22718756-22718775 | MS.gene91150:intron | 40.0% | |
| ! | AATCATTGGCAAGTTGAGGA+AGG | - | chr1.3:22718113-22718132 | None:intergenic | 40.0% |
| ! | ACATTGCAAGCAGACCTTTT+CGG | + | chr1.3:22720795-22720814 | MS.gene91150:CDS | 40.0% |
| ! | CCAACTTTTAGTGATGTCAC+TGG | - | chr1.3:22723167-22723186 | None:intergenic | 40.0% |
| ! | TCCTCTTTTTGCTAGTGAGA+AGG | + | chr1.3:22719238-22719257 | MS.gene91150:CDS | 40.0% |
| ! | TGAGCCATGAAAGACTAGTT+TGG | - | chr1.3:22721112-22721131 | None:intergenic | 40.0% |
| !! | AATTCAAGTTGCTGGAATGG+GGG | + | chr1.3:22720587-22720606 | MS.gene91150:CDS | 40.0% |
| !! | AGGTGGATTGAGATACAAGA+AGG | - | chr1.3:22721560-22721579 | None:intergenic | 40.0% |
| !! | CGGTTTTGTATGGTTGAGTT+AGG | + | chr1.3:22718454-22718473 | MS.gene91150:intron | 40.0% |
| !! | GAAGAAGGCATTGAAGAAGA+AGG | - | chr1.3:22717961-22717980 | None:intergenic | 40.0% |
| !! | GGTGGATTGAGATACAAGAA+GGG | - | chr1.3:22721559-22721578 | None:intergenic | 40.0% |
| !! | GTGACACAAATTCAAGTTGC+TGG | + | chr1.3:22720579-22720598 | MS.gene91150:CDS | 40.0% |
| !! | TTCCTTGTTATTTGCCGAAC+CGG | - | chr1.3:22719575-22719594 | None:intergenic | 40.0% |
| AACATCAACCCAATCTGTGC+CGG | + | chr1.3:22719553-22719572 | MS.gene91150:intron | 45.0% | |
| AAGAGGACAGATGACTGCAA+TGG | - | chr1.3:22719225-22719244 | None:intergenic | 45.0% | |
| AAGTTGCGCCTTCAATTCTC+TGG | + | chr1.3:22720829-22720848 | MS.gene91150:intron | 45.0% | |
| AATGGAGGGAGTAGCAGTAA+TGG | + | chr1.3:22721968-22721987 | MS.gene91150:intron | 45.0% | |
| ACTAATCCTTGTGGAGGCAA+AGG | + | chr1.3:22721394-22721413 | MS.gene91150:CDS | 45.0% | |
| ACTAGAACGACTTAGACCTG+AGG | + | chr1.3:22719322-22719341 | MS.gene91150:CDS | 45.0% | |
| ACTTCTGCTTAAAGGTGGTG+AGG | + | chr1.3:22719703-22719722 | MS.gene91150:intron | 45.0% | |
| AGCCTCCTTATCAGGAACAT+TGG | + | chr1.3:22718613-22718632 | MS.gene91150:intron | 45.0% | |
| CACCTTTAAGCAGAAGTCCA+GGG | - | chr1.3:22719700-22719719 | None:intergenic | 45.0% | |
| CAGTGCAGAGATTATGAAGG+AGG | - | chr1.3:22718640-22718659 | None:intergenic | 45.0% | |
| CCCAGCATTTGCCATCTTTA+AGG | + | chr1.3:22719792-22719811 | MS.gene91150:intron | 45.0% | |
| CGAAGCTCAGACATTTCTTG+AGG | + | chr1.3:22720264-22720283 | MS.gene91150:CDS | 45.0% | |
| CTCCAACACCTTCACTATGT+TGG | + | chr1.3:22718344-22718363 | MS.gene91150:intron | 45.0% | |
| CTCCTTCATAATCTCTGCAC+TGG | + | chr1.3:22718638-22718657 | MS.gene91150:intron | 45.0% | |
| CTCTACTCTCTCTACTTCCT+TGG | + | chr1.3:22721143-22721162 | MS.gene91150:intron | 45.0% | |
| GACCAATCATTGGCAAGTTG+AGG | - | chr1.3:22718117-22718136 | None:intergenic | 45.0% | |
| GACCAATGTTCCTGATAAGG+AGG | - | chr1.3:22718618-22718637 | None:intergenic | 45.0% | |
| GAGGACCAATGTTCCTGATA+AGG | - | chr1.3:22718621-22718640 | None:intergenic | 45.0% | |
| GCACTTGAACATGGCTTAGA+TGG | + | chr1.3:22720381-22720400 | MS.gene91150:CDS | 45.0% | |
| GCCTAAAGTATGGACAATGC+GGG | - | chr1.3:22718533-22718552 | None:intergenic | 45.0% | |
| GGGGACATCTACCAAATCAA+TGG | + | chr1.3:22722617-22722636 | MS.gene91150:intron | 45.0% | |
| GGTGTCCAAGAAGAAGAAGA+AGG | - | chr1.3:22717976-22717995 | None:intergenic | 45.0% | |
| GTCTCATATAGTCCTTACGG+TGG | + | chr1.3:22719444-22719463 | MS.gene91150:intron | 45.0% | |
| TAGACCACTAATCCTTGTGG+AGG | + | chr1.3:22721388-22721407 | MS.gene91150:CDS | 45.0% | |
| TCCCGCATTGTCCATACTTT+AGG | + | chr1.3:22718529-22718548 | MS.gene91150:intron | 45.0% | |
| TTCCTGATAAGGAGGCTAGA+GGG | - | chr1.3:22718610-22718629 | None:intergenic | 45.0% | |
| TTCTTCTTGGACACCATTGG+AGG | + | chr1.3:22717981-22718000 | MS.gene91150:CDS | 45.0% | |
| TTGTGGTTGATCAACAGGGT+CGG | + | chr1.3:22721327-22721346 | MS.gene91150:CDS | 45.0% | |
| TTTCGCAATTAGGAGGCTAG+GGG | - | chr1.3:22718302-22718321 | None:intergenic | 45.0% | |
| TTTGCCTCCACAAGGATTAG+TGG | - | chr1.3:22721395-22721414 | None:intergenic | 45.0% | |
| ! | AGTCTTATGAGACCTGGTGA+AGG | + | chr1.3:22720633-22720652 | MS.gene91150:CDS | 45.0% |
| ! | CAAGTTGAGGAAGGTGAGAT+GGG | - | chr1.3:22718104-22718123 | None:intergenic | 45.0% |
| ! | CATTGCAAGCAGACCTTTTC+GGG | + | chr1.3:22720796-22720815 | MS.gene91150:CDS | 45.0% |
| ! | GGTGTTGGAGGTTACAATGA+AGG | - | chr1.3:22718334-22718353 | None:intergenic | 45.0% |
| ! | TAGGTTGGATCCTTTGCTAG+AGG | + | chr1.3:22720734-22720753 | MS.gene91150:intron | 45.0% |
| ! | TTTTCTCACCCGTAAGGATG+TGG | + | chr1.3:22719670-22719689 | MS.gene91150:intron | 45.0% |
| ! | TTTTCTGCTTGCTCATCCTC+AGG | - | chr1.3:22719341-22719360 | None:intergenic | 45.0% |
| !! | CAACATAGTGAAGGTGTTGG+AGG | - | chr1.3:22718346-22718365 | None:intergenic | 45.0% |
| !! | CCATACAAAACCGGCTTGTA+TGG | - | chr1.3:22718447-22718466 | None:intergenic | 45.0% |
| !! | CCATACAAGCCGGTTTTGTA+TGG | + | chr1.3:22718444-22718463 | MS.gene91150:intron | 45.0% |
| !! | CTAAGTCGTTCTAGTTCCTC+CGG | - | chr1.3:22719317-22719336 | None:intergenic | 45.0% |
| !! | GCTTTAGTTTGTCCCGTACA+AGG | + | chr1.3:22723045-22723064 | MS.gene91150:CDS | 45.0% |
| !! | GGGTTGATGTTTCAGTTGTG+AGG | - | chr1.3:22719544-22719563 | None:intergenic | 45.0% |
| !! | TTAGTAGGGGTGTTACAGGT+CGG | + | chr1.3:22720297-22720316 | MS.gene91150:intron | 45.0% |
| !!! | AATTATAATTTTATGATATT+TGG | + | chr1.3:22719175-22719194 | MS.gene91150:intron | 5.0% |
| !!! | TAAAAAAATAATATTTTCTT+TGG | - | chr1.3:22718851-22718870 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTGATAT+AGG | - | chr1.3:22722683-22722702 | None:intergenic | 5.0% |
| ACAGCAATGTAGGCGTGAAC+TGG | - | chr1.3:22721254-22721273 | None:intergenic | 50.0% | |
| ATGACGGCAGCTGTTGAAAG+AGG | + | chr1.3:22718060-22718079 | MS.gene91150:CDS | 50.0% | |
| ATTTGGTAGATGTCCCCCCA+TGG | - | chr1.3:22722614-22722633 | None:intergenic | 50.0% | |
| CACAAACCTTTGCCTCCACA+AGG | - | chr1.3:22721403-22721422 | None:intergenic | 50.0% | |
| CATACGAGAAGTCCTTCACC+AGG | - | chr1.3:22720648-22720667 | None:intergenic | 50.0% | |
| CCACCTTTAAGCAGAAGTCC+AGG | - | chr1.3:22719701-22719720 | None:intergenic | 50.0% | |
| CCTGGACTTCTGCTTAAAGG+TGG | + | chr1.3:22719698-22719717 | MS.gene91150:intron | 50.0% | |
| CGTGTGTTGGAAGTAGAAGG+TGG | - | chr1.3:22717925-22717944 | None:intergenic | 50.0% | |
| CTGCTTAAAGGTGGTGAGGT+CGG | + | chr1.3:22719707-22719726 | MS.gene91150:intron | 50.0% | |
| CTTACCGCATTCACCCGAAA+AGG | - | chr1.3:22720812-22720831 | None:intergenic | 50.0% | |
| GACCCTGGACTTCTGCTTAA+AGG | + | chr1.3:22719695-22719714 | MS.gene91150:intron | 50.0% | |
| GCAATGGCTGTACTCCATCA+TGG | - | chr1.3:22719209-22719228 | None:intergenic | 50.0% | |
| GGTGAGTCACATGTGGTCTA+CGG | - | chr1.3:22719773-22719792 | None:intergenic | 50.0% | |
| GTGTTGGAAGTAGAAGGTGG+TGG | - | chr1.3:22717922-22717941 | None:intergenic | 50.0% | |
| GTTCCTGATAAGGAGGCTAG+AGG | - | chr1.3:22718611-22718630 | None:intergenic | 50.0% | |
| GTTGTGACGCAAACGTGTGT+TGG | - | chr1.3:22717938-22717957 | None:intergenic | 50.0% | |
| TCCTGATAAGGAGGCTAGAG+GGG | - | chr1.3:22718609-22718628 | None:intergenic | 50.0% | |
| TGACAACTATCCAAGGGGTG+TGG | - | chr1.3:22718683-22718702 | None:intergenic | 50.0% | |
| TGGACACCATTGGAGGATAC+TGG | + | chr1.3:22717988-22718007 | MS.gene91150:CDS | 50.0% | |
| TTCACTATGTTGGGCGCGAA+GGG | + | chr1.3:22718354-22718373 | MS.gene91150:intron | 50.0% | |
| ! | CTCTGCAGTCTTATGAGACC+TGG | + | chr1.3:22720627-22720646 | MS.gene91150:CDS | 50.0% |
| ! | GACAACTATCCAAGGGGTGT+GGG | - | chr1.3:22718682-22718701 | None:intergenic | 50.0% |
| ! | GCAAGTTGAGGAAGGTGAGA+TGG | - | chr1.3:22718105-22718124 | None:intergenic | 50.0% |
| ! | GCCCAACATAGTGAAGGTGT+TGG | - | chr1.3:22718349-22718368 | None:intergenic | 50.0% |
| ! | TTTTGACGTTTCGACACCGG+AGG | + | chr1.3:22719298-22719317 | MS.gene91150:CDS | 50.0% |
| !! | TCAAGCATTGGTCCACCGTA+AGG | - | chr1.3:22719459-22719478 | None:intergenic | 50.0% |
| !! | TGCCGGTTCGGCAAATAACA+AGG | + | chr1.3:22719570-22719589 | MS.gene91150:intron | 50.0% |
| !!! | CAGACCTTTTCGGGTGAATG+CGG | + | chr1.3:22720805-22720824 | MS.gene91150:CDS | 50.0% |
| AATGCGGGATGCCCAACAAG+AGG | - | chr1.3:22718518-22718537 | None:intergenic | 55.0% | |
| ACCGCCTGGAACAGCAATGT+AGG | - | chr1.3:22721264-22721283 | None:intergenic | 55.0% | |
| AGGGTCCACCACATCCTTAC+GGG | - | chr1.3:22719681-22719700 | None:intergenic | 55.0% | |
| AGGTAGGATGTTCTACCGCC+TGG | - | chr1.3:22721278-22721297 | None:intergenic | 55.0% | |
| ATGCGGGATGCCCAACAAGA+GGG | - | chr1.3:22718517-22718536 | None:intergenic | 55.0% | |
| ATGCTGGGGTGAGTCACATG+TGG | - | chr1.3:22719780-22719799 | None:intergenic | 55.0% | |
| CAGGGTCCACCACATCCTTA+CGG | - | chr1.3:22719682-22719701 | None:intergenic | 55.0% | |
| CCTGATAAGGAGGCTAGAGG+GGG | - | chr1.3:22718608-22718627 | None:intergenic | 55.0% | |
| CGGCAGCTGTTGAAAGAGGA+TGG | + | chr1.3:22718064-22718083 | MS.gene91150:CDS | 55.0% | |
| CTTCACTATGTTGGGCGCGA+AGG | + | chr1.3:22718353-22718372 | MS.gene91150:intron | 55.0% | |
| CTTCGCGCCCAACATAGTGA+AGG | - | chr1.3:22718355-22718374 | None:intergenic | 55.0% | |
| GAGTCACATGTGGTCTACGG+TGG | - | chr1.3:22719770-22719789 | None:intergenic | 55.0% | |
| GCAGCTCTCACCATACAAGC+CGG | + | chr1.3:22718434-22718453 | MS.gene91150:intron | 55.0% | |
| TCTCACCCGTAAGGATGTGG+TGG | + | chr1.3:22719673-22719692 | MS.gene91150:intron | 55.0% | |
| TTGCCGAACCGGCACAGATT+GGG | - | chr1.3:22719564-22719583 | None:intergenic | 55.0% | |
| TTTGCCGAACCGGCACAGAT+TGG | - | chr1.3:22719565-22719584 | None:intergenic | 55.0% | |
| ! | CACGCCTACATTGCTGTTCC+AGG | + | chr1.3:22721257-22721276 | MS.gene91150:CDS | 55.0% |
| ! | GCCTACATTGCTGTTCCAGG+CGG | + | chr1.3:22721260-22721279 | MS.gene91150:CDS | 55.0% |
| !! | AGGGGTGTTACAGGTCGGTT+TGG | + | chr1.3:22720302-22720321 | MS.gene91150:intron | 55.0% |
| !! | CAACCCAATCTGTGCCGGTT+CGG | + | chr1.3:22719558-22719577 | MS.gene91150:intron | 55.0% |
| !! | CTCATTGGTTCGAGCGTGAG+GGG | + | chr1.3:22718552-22718571 | MS.gene91150:intron | 55.0% |
| !! | GCTCATTGGTTCGAGCGTGA+GGG | + | chr1.3:22718551-22718570 | MS.gene91150:intron | 55.0% |
| !! | TCATTGGTTCGAGCGTGAGG+GGG | + | chr1.3:22718553-22718572 | MS.gene91150:intron | 55.0% |
| AGAGCCTGGAGCCCTCTTGT+TGG | + | chr1.3:22718503-22718522 | MS.gene91150:intron | 60.0% | |
| ATGCCCAACAAGAGGGCTCC+AGG | - | chr1.3:22718510-22718529 | None:intergenic | 60.0% | |
| CAAGGAGGGGCTCGACATAC+CGG | + | chr1.3:22723209-22723228 | MS.gene91150:CDS | 60.0% | |
| CCCCCTCTAGCCTCCTTATC+AGG | + | chr1.3:22718605-22718624 | MS.gene91150:intron | 60.0% | |
| GAGCCTGGAGCCCTCTTGTT+GGG | + | chr1.3:22718504-22718523 | MS.gene91150:intron | 60.0% | |
| ! | CTATCCAAGGGGTGTGGGTG+TGG | - | chr1.3:22718677-22718696 | None:intergenic | 60.0% |
| !! | CGTAAGGATGTGGTGGACCC+TGG | + | chr1.3:22719680-22719699 | MS.gene91150:intron | 60.0% |
| !! | GGCTCATTGGTTCGAGCGTG+AGG | + | chr1.3:22718550-22718569 | MS.gene91150:intron | 60.0% |
| TGAGCCACACCCACACCCCT+TGG | + | chr1.3:22718670-22718689 | MS.gene91150:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 22717880 | 22723265 | 22717880 | ID=MS.gene91150 |
| chr1.3 | mRNA | 22717880 | 22723265 | 22717880 | ID=MS.gene91150.t1;Parent=MS.gene91150 |
| chr1.3 | exon | 22717880 | 22718138 | 22717880 | ID=MS.gene91150.t1.exon1;Parent=MS.gene91150.t1 |
| chr1.3 | CDS | 22717880 | 22718138 | 22717880 | ID=cds.MS.gene91150.t1;Parent=MS.gene91150.t1 |
| chr1.3 | exon | 22719222 | 22719388 | 22719222 | ID=MS.gene91150.t1.exon2;Parent=MS.gene91150.t1 |
| chr1.3 | CDS | 22719222 | 22719388 | 22719222 | ID=cds.MS.gene91150.t1;Parent=MS.gene91150.t1 |
| chr1.3 | exon | 22720187 | 22720285 | 22720187 | ID=MS.gene91150.t1.exon3;Parent=MS.gene91150.t1 |
| chr1.3 | CDS | 22720187 | 22720285 | 22720187 | ID=cds.MS.gene91150.t1;Parent=MS.gene91150.t1 |
| chr1.3 | exon | 22720381 | 22720449 | 22720381 | ID=MS.gene91150.t1.exon4;Parent=MS.gene91150.t1 |
| chr1.3 | CDS | 22720381 | 22720449 | 22720381 | ID=cds.MS.gene91150.t1;Parent=MS.gene91150.t1 |
| chr1.3 | exon | 22720522 | 22720662 | 22720522 | ID=MS.gene91150.t1.exon5;Parent=MS.gene91150.t1 |
| chr1.3 | CDS | 22720522 | 22720662 | 22720522 | ID=cds.MS.gene91150.t1;Parent=MS.gene91150.t1 |
| chr1.3 | exon | 22720737 | 22720826 | 22720737 | ID=MS.gene91150.t1.exon6;Parent=MS.gene91150.t1 |
| chr1.3 | CDS | 22720737 | 22720826 | 22720737 | ID=cds.MS.gene91150.t1;Parent=MS.gene91150.t1 |
| chr1.3 | exon | 22721248 | 22721415 | 22721248 | ID=MS.gene91150.t1.exon7;Parent=MS.gene91150.t1 |
| chr1.3 | CDS | 22721248 | 22721415 | 22721248 | ID=cds.MS.gene91150.t1;Parent=MS.gene91150.t1 |
| chr1.3 | exon | 22722991 | 22723066 | 22722991 | ID=MS.gene91150.t1.exon8;Parent=MS.gene91150.t1 |
| chr1.3 | CDS | 22722991 | 22723066 | 22722991 | ID=cds.MS.gene91150.t1;Parent=MS.gene91150.t1 |
| chr1.3 | exon | 22723138 | 22723265 | 22723138 | ID=MS.gene91150.t1.exon9;Parent=MS.gene91150.t1 |
| chr1.3 | CDS | 22723138 | 22723265 | 22723138 | ID=cds.MS.gene91150.t1;Parent=MS.gene91150.t1 |
| Gene Sequence |
| Protein sequence |
