Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92313.t1 | XP_003610689.1 | 85.8 | 372 | 32 | 7 | 1 | 370 | 1 | 353 | 1.40E-115 | 426.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92313.t1 | Q3E936 | 43.8 | 313 | 151 | 4 | 53 | 355 | 34 | 331 | 4.4e-14 | 80.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92313.t1 | G7K2B3 | 85.8 | 372 | 32 | 7 | 1 | 370 | 1 | 353 | 9.7e-116 | 426.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene92313 | 0.860414 | 2.10E-63 | -1.69E-46 |
| MS.gene050338 | MS.gene92313 | 0.815574 | 8.62E-52 | -1.69E-46 |
| MS.gene050444 | MS.gene92313 | -0.810193 | 1.30E-50 | -1.69E-46 |
| MS.gene050707 | MS.gene92313 | 0.801902 | 7.23E-49 | -1.69E-46 |
| MS.gene050710 | MS.gene92313 | 0.817255 | 3.63E-52 | -1.69E-46 |
| MS.gene050875 | MS.gene92313 | 0.827041 | 1.95E-54 | -1.69E-46 |
| MS.gene051439 | MS.gene92313 | 0.81199 | 5.31E-51 | -1.69E-46 |
| MS.gene051914 | MS.gene92313 | 0.866702 | 2.35E-65 | -1.69E-46 |
| MS.gene052169 | MS.gene92313 | 0.810789 | 9.68E-51 | -1.69E-46 |
| MS.gene052209 | MS.gene92313 | 0.833838 | 4.24E-56 | -1.69E-46 |
| MS.gene052308 | MS.gene92313 | 0.856106 | 4.02E-62 | -1.69E-46 |
| MS.gene052383 | MS.gene92313 | 0.808492 | 3.02E-50 | -1.69E-46 |
| MS.gene053108 | MS.gene92313 | 0.819929 | 8.97E-53 | -1.69E-46 |
| MS.gene053173 | MS.gene92313 | 0.831584 | 1.54E-55 | -1.69E-46 |
| MS.gene053348 | MS.gene92313 | 0.827938 | 1.19E-54 | -1.69E-46 |
| MS.gene054551 | MS.gene92313 | 0.847928 | 8.48E-60 | -1.69E-46 |
| MS.gene054593 | MS.gene92313 | 0.854067 | 1.58E-61 | -1.69E-46 |
| MS.gene054633 | MS.gene92313 | 0.843329 | 1.50E-58 | -1.69E-46 |
| MS.gene054662 | MS.gene92313 | 0.84338 | 1.45E-58 | -1.69E-46 |
| MS.gene054850 | MS.gene92313 | 0.836311 | 1.01E-56 | -1.69E-46 |
| MS.gene054941 | MS.gene92313 | 0.86844 | 6.52E-66 | -1.69E-46 |
| MS.gene055308 | MS.gene92313 | 0.851292 | 9.76E-61 | -1.69E-46 |
| MS.gene055578 | MS.gene92313 | 0.824434 | 8.09E-54 | -1.69E-46 |
| MS.gene056041 | MS.gene92313 | 0.832683 | 8.22E-56 | -1.69E-46 |
| MS.gene056387 | MS.gene92313 | -0.837784 | 4.24E-57 | -1.69E-46 |
| MS.gene05640 | MS.gene92313 | 0.877376 | 6.61E-69 | -1.69E-46 |
| MS.gene056528 | MS.gene92313 | 0.844816 | 5.98E-59 | -1.69E-46 |
| MS.gene05652 | MS.gene92313 | 0.87308 | 1.94E-67 | -1.69E-46 |
| MS.gene056618 | MS.gene92313 | 0.841157 | 5.63E-58 | -1.69E-46 |
| MS.gene057101 | MS.gene92313 | 0.842516 | 2.47E-58 | -1.69E-46 |
| MS.gene057367 | MS.gene92313 | 0.841379 | 4.92E-58 | -1.69E-46 |
| MS.gene057458 | MS.gene92313 | 0.829094 | 6.24E-55 | -1.69E-46 |
| MS.gene057669 | MS.gene92313 | 0.854259 | 1.39E-61 | -1.69E-46 |
| MS.gene057717 | MS.gene92313 | 0.837469 | 5.10E-57 | -1.69E-46 |
| MS.gene058013 | MS.gene92313 | 0.803396 | 3.56E-49 | -1.69E-46 |
| MS.gene058128 | MS.gene92313 | 0.901963 | 1.57E-78 | -1.69E-46 |
| MS.gene058853 | MS.gene92313 | 0.89568 | 7.61E-76 | -1.69E-46 |
| MS.gene05926 | MS.gene92313 | 0.858061 | 1.07E-62 | -1.69E-46 |
| MS.gene059553 | MS.gene92313 | 0.825065 | 5.74E-54 | -1.69E-46 |
| MS.gene05960 | MS.gene92313 | 0.806802 | 6.89E-50 | -1.69E-46 |
| MS.gene059616 | MS.gene92313 | 0.857085 | 2.07E-62 | -1.69E-46 |
| MS.gene059905 | MS.gene92313 | 0.81481 | 1.27E-51 | -1.69E-46 |
| MS.gene06093 | MS.gene92313 | 0.861888 | 7.48E-64 | -1.69E-46 |
| MS.gene061099 | MS.gene92313 | 0.810773 | 9.76E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92313.t1 | MTR_5g005960 | 90.323 | 372 | 15 | 8 | 1 | 370 | 1 | 353 | 1.67e-174 | 489 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92313.t1 | AT5G26230 | 46.970 | 330 | 134 | 8 | 44 | 355 | 25 | 331 | 8.17e-71 | 225 |
Find 78 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTACTAACCCCTGGTTTAT+TGG | 0.157769 | 5.1:+914885 | None:intergenic |
| GGAGGAAGTGGCGGAGGAGG+TGG | 0.198247 | 5.1:+915674 | None:intergenic |
| GAAACACAGTTTCTCTTTCT+TGG | 0.237235 | 5.1:+915066 | None:intergenic |
| GGAAGTGGCGGAGGAGGTGG+AGG | 0.258777 | 5.1:+915677 | None:intergenic |
| AGTGGCGGAGGAGGTGGAGG+AGG | 0.348526 | 5.1:+915680 | None:intergenic |
| AGATCTTCACCAAGTCATTC+TGG | 0.364909 | 5.1:-915024 | MS.gene92313:CDS |
| TAGCAACAGTTTCACCTTCT+CGG | 0.380074 | 5.1:+915367 | None:intergenic |
| GGAGGAGGAAGTGGCGGAGG+AGG | 0.382522 | 5.1:+915671 | None:intergenic |
| TTCTGGCGTTCTTTCACAAA+AGG | 0.390582 | 5.1:-915007 | MS.gene92313:CDS |
| AGCAACAGTTTCACCTTCTC+GGG | 0.399484 | 5.1:+915368 | None:intergenic |
| CAAAAGGGTGTTCTTCTTCG+TGG | 0.404135 | 5.1:-914991 | MS.gene92313:CDS |
| AGAGAAGAAAAGAGCTGAGA+TGG | 0.412803 | 5.1:-915937 | MS.gene92313:CDS |
| CGAGAAGAATCACAAGAATC+AGG | 0.418416 | 5.1:+915570 | None:intergenic |
| GAGAAGAAAAGAGCTGAGAT+GGG | 0.425520 | 5.1:-915936 | MS.gene92313:CDS |
| GAAAGAAGTGGTGGAATCAT+TGG | 0.430173 | 5.1:+915614 | None:intergenic |
| AGACAAAGAGAAATACTTGT+TGG | 0.431020 | 5.1:+915452 | None:intergenic |
| CTTCTCTACCACATCATACA+TGG | 0.432454 | 5.1:+915953 | None:intergenic |
| GGAGGATTTGCGAGGTGAAA+TGG | 0.432667 | 5.1:+915803 | None:intergenic |
| AGCAGTGGAGGAGGAAGTGG+CGG | 0.433040 | 5.1:+915665 | None:intergenic |
| AGTGGAGGAGGAAGTGGCGG+AGG | 0.439902 | 5.1:+915668 | None:intergenic |
| GGGAGCAGTGGAGGAGGAAG+TGG | 0.441095 | 5.1:+915662 | None:intergenic |
| AAAGAAACCGTTGCTAAAAC+AGG | 0.445355 | 5.1:-915408 | MS.gene92313:CDS |
| TCTTCTTCTGTTACAGAACT+TGG | 0.446376 | 5.1:+915546 | None:intergenic |
| CGCTACTACCGGTGGAATCA+CGG | 0.456800 | 5.1:+915640 | None:intergenic |
| TGAATTGGATCTAGTGTTGT+TGG | 0.465264 | 5.1:+915488 | None:intergenic |
| ATCATTGGAGGCGCTACTAC+CGG | 0.488441 | 5.1:+915629 | None:intergenic |
| AATGAGTGTTACTGCTAAAG+AGG | 0.495711 | 5.1:-915310 | MS.gene92313:CDS |
| ATGAGTAATAGCACCTTGAA+TGG | 0.497731 | 5.1:+914927 | None:intergenic |
| TGTGAAAGTTTCTCGTACAA+TGG | 0.500772 | 5.1:+915258 | None:intergenic |
| GGAATCACGGGGAGCAGTGG+AGG | 0.500991 | 5.1:+915653 | None:intergenic |
| AGGTGGAGGAGGAAGAGAGA+AGG | 0.508253 | 5.1:+915691 | None:intergenic |
| GGCACTCTGCAACTCTTCCA+TGG | 0.508446 | 5.1:+914948 | None:intergenic |
| GCTACTACCGGTGGAATCAC+GGG | 0.509033 | 5.1:+915641 | None:intergenic |
| TCTGGCGTTCTTTCACAAAA+GGG | 0.511252 | 5.1:-915006 | MS.gene92313:CDS |
| ATACGAGGGGAGAGATGAAG+AGG | 0.517544 | 5.1:+915732 | None:intergenic |
| GGTGGAATCACGGGGAGCAG+TGG | 0.517781 | 5.1:+915650 | None:intergenic |
| GCAGATGAACTCTTCTACAA+AGG | 0.517915 | 5.1:-915765 | MS.gene92313:CDS |
| ATCACGGGGAGCAGTGGAGG+AGG | 0.520130 | 5.1:+915656 | None:intergenic |
| AATGAGTGTGATGGTGATGA+AGG | 0.520154 | 5.1:+915864 | None:intergenic |
| GGTGAAGATCTCATCGAAGA+AGG | 0.550102 | 5.1:+915036 | None:intergenic |
| TCATGATTACTACTAACCCC+TGG | 0.551114 | 5.1:+914877 | None:intergenic |
| TGCAGGACAGAGAGTGTTGG+AGG | 0.552177 | 5.1:+915785 | None:intergenic |
| ACTGCTCCCCGTGATTCCAC+CGG | 0.554614 | 5.1:-915648 | MS.gene92313:CDS |
| ACAGCAACAAACAGTGGAGG+AGG | 0.558053 | 5.1:-915232 | MS.gene92313:CDS |
| GAGAAGGAGAGTACGTACCA+TGG | 0.559429 | 5.1:+915707 | None:intergenic |
| GAGTTGCAGAGTGCCATTCA+AGG | 0.563158 | 5.1:-914940 | MS.gene92313:CDS |
| AGAGATGAAGAGGTAAGAGT+TGG | 0.563757 | 5.1:+915742 | None:intergenic |
| AACGTTAACTACTACGACAA+CGG | 0.575052 | 5.1:-915184 | MS.gene92313:CDS |
| TGATCGAGATGCTTCTTCCA+TGG | 0.576373 | 5.1:-914965 | MS.gene92313:CDS |
| AGAAGAAAAGAGCTGAGATG+GGG | 0.580424 | 5.1:-915935 | MS.gene92313:CDS |
| TTGTAGAAGAGTTCATCTGC+AGG | 0.581095 | 5.1:+915768 | None:intergenic |
| ATCTGCAGGACAGAGAGTGT+TGG | 0.581581 | 5.1:+915782 | None:intergenic |
| TCTTTGATTACCAATAAACC+AGG | 0.582297 | 5.1:-914895 | MS.gene92313:CDS |
| TCTCTCCCCTCGTATCTCCA+TGG | 0.583262 | 5.1:-915724 | MS.gene92313:CDS |
| ATCACTGATGAAAGAAGTGG+TGG | 0.586109 | 5.1:+915605 | None:intergenic |
| GAGAAGAAAGAGAATGTGGC+GGG | 0.590250 | 5.1:-915129 | MS.gene92313:CDS |
| ACCGTTGCTAAAACCCGAGA+AGG | 0.590587 | 5.1:-915381 | MS.gene92313:CDS |
| ATCTGAGAAGAAAGAGAATG+TGG | 0.594317 | 5.1:-915133 | MS.gene92313:CDS |
| AGAAGTGGTGGAATCATTGG+AGG | 0.594966 | 5.1:+915617 | None:intergenic |
| CTTTGATTACCAATAAACCA+GGG | 0.602225 | 5.1:-914894 | MS.gene92313:CDS |
| ATTGGATCTAGTGTTGTTGG+AGG | 0.616982 | 5.1:+915491 | None:intergenic |
| GAAAGAACGCCAGAATGACT+TGG | 0.620408 | 5.1:+915015 | None:intergenic |
| GATTGTGAACTCAAAATCTG+AGG | 0.622599 | 5.1:+915827 | None:intergenic |
| ATTGGAGGCGCTACTACCGG+TGG | 0.625649 | 5.1:+915632 | None:intergenic |
| ATGAGTGTGATGGTGATGAA+GGG | 0.631861 | 5.1:+915865 | None:intergenic |
| TACGTACCATGGAGATACGA+GGG | 0.636974 | 5.1:+915718 | None:intergenic |
| AAGGGTGTTCTTCTTCGTGG+TGG | 0.640900 | 5.1:-914988 | MS.gene92313:CDS |
| AAGATCACTGATGAAAGAAG+TGG | 0.640945 | 5.1:+915602 | None:intergenic |
| CAGCAACAAACAGTGGAGGA+GGG | 0.645100 | 5.1:-915231 | MS.gene92313:CDS |
| AAAACAGCAACAAACAGTGG+AGG | 0.646252 | 5.1:-915235 | MS.gene92313:CDS |
| TGAGAAGAAAGAGAATGTGG+CGG | 0.646818 | 5.1:-915130 | MS.gene92313:CDS |
| CTACTACCGGTGGAATCACG+GGG | 0.647123 | 5.1:+915642 | None:intergenic |
| GATGATGAGAATGAGTGTGA+TGG | 0.651954 | 5.1:+915855 | None:intergenic |
| TTTGATTACCAATAAACCAG+GGG | 0.666066 | 5.1:-914893 | MS.gene92313:CDS |
| GTACGTACCATGGAGATACG+AGG | 0.687365 | 5.1:+915717 | None:intergenic |
| AGAGTGTTGGAGGATTTGCG+AGG | 0.696367 | 5.1:+915795 | None:intergenic |
| ACGTACCATGGAGATACGAG+GGG | 0.713565 | 5.1:+915719 | None:intergenic |
| GGACGCAACCATGTATGATG+TGG | 0.730640 | 5.1:-915961 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGTTATCTCATTCGTTTT+CGG | - | chr5.1:915709-915728 | MS.gene92313:CDS | 25.0% |
| AGACAAAGAGAAATACTTGT+TGG | + | chr5.1:915363-915382 | None:intergenic | 30.0% | |
| CTTTGATTACCAATAAACCA+GGG | - | chr5.1:915918-915937 | MS.gene92313:CDS | 30.0% | |
| TCTTTGATTACCAATAAACC+AGG | - | chr5.1:915917-915936 | MS.gene92313:CDS | 30.0% | |
| TTTGATTACCAATAAACCAG+GGG | - | chr5.1:915919-915938 | MS.gene92313:CDS | 30.0% | |
| ! | ATGTTATCTCATTCGTTTTC+GGG | - | chr5.1:915710-915729 | MS.gene92313:CDS | 30.0% |
| ! | TGTTTCTTTTGCTCTGTTTT+TGG | + | chr5.1:914913-914932 | None:intergenic | 30.0% |
| AAAGAAACCGTTGCTAAAAC+AGG | - | chr5.1:915404-915423 | MS.gene92313:CDS | 35.0% | |
| AACGTTAACTACTACGACAA+CGG | - | chr5.1:915628-915647 | MS.gene92313:CDS | 35.0% | |
| AAGATCACTGATGAAAGAAG+TGG | + | chr5.1:915213-915232 | None:intergenic | 35.0% | |
| ACAAAAACAGCAACAAACAG+TGG | - | chr5.1:915574-915593 | MS.gene92313:CDS | 35.0% | |
| ATCTGAGAAGAAAGAGAATG+TGG | - | chr5.1:915679-915698 | MS.gene92313:CDS | 35.0% | |
| ATGAGTAATAGCACCTTGAA+TGG | + | chr5.1:915888-915907 | None:intergenic | 35.0% | |
| GAAACACAGTTTCTCTTTCT+TGG | + | chr5.1:915749-915768 | None:intergenic | 35.0% | |
| GATTGTGAACTCAAAATCTG+AGG | + | chr5.1:914988-915007 | None:intergenic | 35.0% | |
| GGTTTCTTTACGAAAAACAG+AGG | + | chr5.1:915393-915412 | None:intergenic | 35.0% | |
| TCTTCTTCTGTTACAGAACT+TGG | + | chr5.1:915269-915288 | None:intergenic | 35.0% | |
| TGAATTGGATCTAGTGTTGT+TGG | + | chr5.1:915327-915346 | None:intergenic | 35.0% | |
| TGTGAAAGTTTCTCGTACAA+TGG | + | chr5.1:915557-915576 | None:intergenic | 35.0% | |
| ! | AATGAGTGTTACTGCTAAAG+AGG | - | chr5.1:915502-915521 | MS.gene92313:CDS | 35.0% |
| ! | GGTTTTCTTCAACTGTGAAT+TGG | + | chr5.1:915342-915361 | None:intergenic | 35.0% |
| ! | TGTTATCTCATTCGTTTTCG+GGG | - | chr5.1:915711-915730 | MS.gene92313:CDS | 35.0% |
| !! | ATTCGTTTTCGGGGAATTTA+AGG | - | chr5.1:915720-915739 | MS.gene92313:CDS | 35.0% |
| AAAACAGCAACAAACAGTGG+AGG | - | chr5.1:915577-915596 | MS.gene92313:CDS | 40.0% | |
| ACTACTAACCCCTGGTTTAT+TGG | + | chr5.1:915930-915949 | None:intergenic | 40.0% | |
| AGAAGAAAAGAGCTGAGATG+GGG | - | chr5.1:914877-914896 | MS.gene92313:CDS | 40.0% | |
| AGAGAAGAAAAGAGCTGAGA+TGG | - | chr5.1:914875-914894 | MS.gene92313:CDS | 40.0% | |
| AGAGATGAAGAGGTAAGAGT+TGG | + | chr5.1:915073-915092 | None:intergenic | 40.0% | |
| AGATCTTCACCAAGTCATTC+TGG | - | chr5.1:915788-915807 | MS.gene92313:CDS | 40.0% | |
| ATCACTGATGAAAGAAGTGG+TGG | + | chr5.1:915210-915229 | None:intergenic | 40.0% | |
| CGAGAAGAATCACAAGAATC+AGG | + | chr5.1:915245-915264 | None:intergenic | 40.0% | |
| GAGAAGAAAAGAGCTGAGAT+GGG | - | chr5.1:914876-914895 | MS.gene92313:CDS | 40.0% | |
| GATGATGAGAATGAGTGTGA+TGG | + | chr5.1:914960-914979 | None:intergenic | 40.0% | |
| GCAGATGAACTCTTCTACAA+AGG | - | chr5.1:915047-915066 | MS.gene92313:CDS | 40.0% | |
| TAGCAACAGTTTCACCTTCT+CGG | + | chr5.1:915448-915467 | None:intergenic | 40.0% | |
| TCATGATTACTACTAACCCC+TGG | + | chr5.1:915938-915957 | None:intergenic | 40.0% | |
| TCTGGCGTTCTTTCACAAAA+GGG | - | chr5.1:915806-915825 | MS.gene92313:CDS | 40.0% | |
| TGAGAAGAAAGAGAATGTGG+CGG | - | chr5.1:915682-915701 | MS.gene92313:CDS | 40.0% | |
| TTCTGGCGTTCTTTCACAAA+AGG | - | chr5.1:915805-915824 | MS.gene92313:CDS | 40.0% | |
| TTGTAGAAGAGTTCATCTGC+AGG | + | chr5.1:915047-915066 | None:intergenic | 40.0% | |
| ! | AATGAGTGTGATGGTGATGA+AGG | + | chr5.1:914951-914970 | None:intergenic | 40.0% |
| ! | ATGAGTGTGATGGTGATGAA+GGG | + | chr5.1:914950-914969 | None:intergenic | 40.0% |
| ! | ATTGGATCTAGTGTTGTTGG+AGG | + | chr5.1:915324-915343 | None:intergenic | 40.0% |
| ! | GAAAGAAGTGGTGGAATCAT+TGG | + | chr5.1:915201-915220 | None:intergenic | 40.0% |
| !!! | GGTTTCACCTGTTTTAGCAA+CGG | + | chr5.1:915414-915433 | None:intergenic | 40.0% |
| AGCAACAGTTTCACCTTCTC+GGG | + | chr5.1:915447-915466 | None:intergenic | 45.0% | |
| GAAAGAACGCCAGAATGACT+TGG | + | chr5.1:915800-915819 | None:intergenic | 45.0% | |
| GAGAAGAAAGAGAATGTGGC+GGG | - | chr5.1:915683-915702 | MS.gene92313:CDS | 45.0% | |
| GGTGAAGATCTCATCGAAGA+AGG | + | chr5.1:915779-915798 | None:intergenic | 45.0% | |
| TACGTACCATGGAGATACGA+GGG | + | chr5.1:915097-915116 | None:intergenic | 45.0% | |
| TGATCGAGATGCTTCTTCCA+TGG | - | chr5.1:915847-915866 | MS.gene92313:CDS | 45.0% | |
| ! | AGAAGTGGTGGAATCATTGG+AGG | + | chr5.1:915198-915217 | None:intergenic | 45.0% |
| !! | ACCTTCTCGGGTTTTAGCAA+CGG | + | chr5.1:915435-915454 | None:intergenic | 45.0% |
| !! | CAAAAGGGTGTTCTTCTTCG+TGG | - | chr5.1:915821-915840 | MS.gene92313:CDS | 45.0% |
| ACAGCAACAAACAGTGGAGG+AGG | - | chr5.1:915580-915599 | MS.gene92313:CDS | 50.0% | |
| ACCGTTGCTAAAACCCGAGA+AGG | - | chr5.1:915431-915450 | MS.gene92313:CDS | 50.0% | |
| ACGTACCATGGAGATACGAG+GGG | + | chr5.1:915096-915115 | None:intergenic | 50.0% | |
| ATACGAGGGGAGAGATGAAG+AGG | + | chr5.1:915083-915102 | None:intergenic | 50.0% | |
| CAGCAACAAACAGTGGAGGA+GGG | - | chr5.1:915581-915600 | MS.gene92313:CDS | 50.0% | |
| GGAGGATTTGCGAGGTGAAA+TGG | + | chr5.1:915012-915031 | None:intergenic | 50.0% | |
| GTACGTACCATGGAGATACG+AGG | + | chr5.1:915098-915117 | None:intergenic | 50.0% | |
| ! | ATCTGCAGGACAGAGAGTGT+TGG | + | chr5.1:915033-915052 | None:intergenic | 50.0% |
| ! | GAGAAGGAGAGTACGTACCA+TGG | + | chr5.1:915108-915127 | None:intergenic | 50.0% |
| ! | GAGTTGCAGAGTGCCATTCA+AGG | - | chr5.1:915872-915891 | MS.gene92313:CDS | 50.0% |
| !! | AAGGGTGTTCTTCTTCGTGG+TGG | - | chr5.1:915824-915843 | MS.gene92313:CDS | 50.0% |
| !! | AGAGTGTTGGAGGATTTGCG+AGG | + | chr5.1:915020-915039 | None:intergenic | 50.0% |
| !! | ATCATTGGAGGCGCTACTAC+CGG | + | chr5.1:915186-915205 | None:intergenic | 50.0% |
| AGGTGGAGGAGGAAGAGAGA+AGG | + | chr5.1:915124-915143 | None:intergenic | 55.0% | |
| CGCTACTACCGGTGGAATCA+CGG | + | chr5.1:915175-915194 | None:intergenic | 55.0% | |
| CTACTACCGGTGGAATCACG+GGG | + | chr5.1:915173-915192 | None:intergenic | 55.0% | |
| GCTACTACCGGTGGAATCAC+GGG | + | chr5.1:915174-915193 | None:intergenic | 55.0% | |
| GGCACTCTGCAACTCTTCCA+TGG | + | chr5.1:915867-915886 | None:intergenic | 55.0% | |
| TCTCTCCCCTCGTATCTCCA+TGG | - | chr5.1:915088-915107 | MS.gene92313:CDS | 55.0% | |
| !! | TGCAGGACAGAGAGTGTTGG+AGG | + | chr5.1:915030-915049 | None:intergenic | 55.0% |
| ACTGCTCCCCGTGATTCCAC+CGG | - | chr5.1:915164-915183 | MS.gene92313:CDS | 60.0% | |
| AGCAGTGGAGGAGGAAGTGG+CGG | + | chr5.1:915150-915169 | None:intergenic | 60.0% | |
| !! | ATTGGAGGCGCTACTACCGG+TGG | + | chr5.1:915183-915202 | None:intergenic | 60.0% |
| AGTGGAGGAGGAAGTGGCGG+AGG | + | chr5.1:915147-915166 | None:intergenic | 65.0% | |
| ATCACGGGGAGCAGTGGAGG+AGG | + | chr5.1:915159-915178 | None:intergenic | 65.0% | |
| GGAATCACGGGGAGCAGTGG+AGG | + | chr5.1:915162-915181 | None:intergenic | 65.0% | |
| GGGAGCAGTGGAGGAGGAAG+TGG | + | chr5.1:915153-915172 | None:intergenic | 65.0% | |
| GGTGGAATCACGGGGAGCAG+TGG | + | chr5.1:915165-915184 | None:intergenic | 65.0% | |
| ! | AGTGGCGGAGGAGGTGGAGG+AGG | + | chr5.1:915135-915154 | None:intergenic | 70.0% |
| ! | GGAAGTGGCGGAGGAGGTGG+AGG | + | chr5.1:915138-915157 | None:intergenic | 70.0% |
| ! | GGAGGAAGTGGCGGAGGAGG+TGG | + | chr5.1:915141-915160 | None:intergenic | 70.0% |
| ! | GGAGGAGGAAGTGGCGGAGG+AGG | + | chr5.1:915144-915163 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 914861 | 915973 | 914861 | ID=MS.gene92313 |
| chr5.1 | mRNA | 914861 | 915973 | 914861 | ID=MS.gene92313.t1;Parent=MS.gene92313 |
| chr5.1 | exon | 914861 | 915973 | 914861 | ID=MS.gene92313.t1.exon1;Parent=MS.gene92313.t1 |
| chr5.1 | CDS | 914861 | 915973 | 914861 | ID=cds.MS.gene92313.t1;Parent=MS.gene92313.t1 |
| Gene Sequence |
| Protein sequence |
