AlfalfaGEDB | MS.gene45619

M. sativa cultivar XinJiangDaYe / MS.gene45619

KEGG: K08235
GO: GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005975 GO:0005976 GO:0006073 GO:0008150 GO:0008152 GO:0009987 GO:0010383 GO:0010410 GO:0010411 GO:0016740 GO:0016757 GO:0016758 GO:0016762 GO:0016787 GO:0016798 GO:0030312 GO:0042546 GO:0043170 GO:0044036 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0046527 GO:0048046 GO:0071554 GO:0071704 GO:0071840 GO:0110165
PFAM: PF00722.24 PF06955.15

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45619.t1	AES90769.1	84.1	328	6	2	1	282	1	328	9.50E-162	579.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45619.t1	Q8LF99	77.9	258	57	0	21	278	33	290	1.2e-128	460.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45619.t1	G7JFA0	84.1	328	6	2	1	282	1	328	6.9e-162	579.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050122	MS.gene45619	0.812781	3.57E-51	-1.69E-46
MS.gene050670	MS.gene45619	0.801497	8.76E-49	-1.69E-46
MS.gene050926	MS.gene45619	-0.813129	2.99E-51	-1.69E-46
MS.gene051387	MS.gene45619	0.81152	6.72E-51	-1.69E-46
MS.gene053301	MS.gene45619	0.808675	2.76E-50	-1.69E-46
MS.gene053813	MS.gene45619	0.811544	6.64E-51	-1.69E-46
MS.gene054435	MS.gene45619	-0.819813	9.54E-53	-1.69E-46
MS.gene054437	MS.gene45619	-0.813736	2.20E-51	-1.69E-46
MS.gene054447	MS.gene45619	-0.817436	3.30E-52	-1.69E-46
MS.gene054486	MS.gene45619	0.862658	4.34E-64	-1.69E-46
MS.gene055909	MS.gene45619	0.834061	3.73E-56	-1.69E-46
MS.gene055911	MS.gene45619	0.836617	8.43E-57	-1.69E-46
MS.gene05601	MS.gene45619	0.823307	1.49E-53	-1.69E-46
MS.gene056422	MS.gene45619	0.805431	1.34E-49	-1.69E-46
MS.gene056448	MS.gene45619	0.808983	2.37E-50	-1.69E-46
MS.gene056511	MS.gene45619	0.813163	2.94E-51	-1.69E-46
MS.gene056902	MS.gene45619	0.805786	1.13E-49	-1.69E-46
MS.gene057469	MS.gene45619	0.802672	5.02E-49	-1.69E-46
MS.gene058995	MS.gene45619	0.813191	2.90E-51	-1.69E-46
MS.gene059420	MS.gene45619	0.827835	1.26E-54	-1.69E-46
MS.gene059530	MS.gene45619	0.818164	2.26E-52	-1.69E-46
MS.gene059711	MS.gene45619	0.826737	2.30E-54	-1.69E-46
MS.gene060837	MS.gene45619	0.855003	8.44E-62	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene45619	MS.gene059595	PPI
MS.gene45619	MS.gene31221	PPI
MS.gene45619	MS.gene069844	PPI
MS.gene45619	MS.gene09167	PPI
MS.gene45619	MS.gene93839	PPI
MS.gene45619	MS.gene49973	PPI
MS.gene45619	MS.gene71577	PPI
MS.gene45619	MS.gene72276	PPI
MS.gene45619	MS.gene66956	PPI
MS.gene45619	MS.gene061468	PPI
MS.gene45619	MS.gene52293	PPI
MS.gene45619	MS.gene033758	PPI
MS.gene45619	MS.gene52292	PPI
MS.gene45619	MS.gene024330	PPI
MS.gene45619	MS.gene72238	PPI
MS.gene45619	MS.gene43303	PPI
MS.gene45619	MS.gene033759	PPI
MS.gene45619	MS.gene99665	PPI
MS.gene45619	MS.gene43849	PPI
MS.gene45619	MS.gene028653	PPI
MS.gene45619	MS.gene93417	PPI
MS.gene45619	MS.gene042579	PPI
MS.gene45619	MS.gene72278	PPI
MS.gene45619	MS.gene91400	PPI
MS.gene45619	MS.gene049783	PPI
MS.gene45619	MS.gene52294	PPI
MS.gene45619	MS.gene69030	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45619.t1	MTR_4g097700	84.146	328	6	2	1	282	1	328	0.0	565
MS.gene45619.t1	MTR_4g097640	98.855	262	3	0	21	282	30	291	0.0	552
MS.gene45619.t1	MTR_4g097670	98.855	262	3	0	21	282	30	291	0.0	552
MS.gene45619.t1	MTR_7g084760	53.933	267	121	2	13	278	22	287	2.27e-103	303
MS.gene45619.t1	MTR_7g084770	55.253	257	113	2	23	278	32	287	3.92e-103	303
MS.gene45619.t1	MTR_6g033085	53.704	270	123	2	10	278	19	287	4.77e-102	300
MS.gene45619.t1	MTR_6g033055	52.963	270	125	2	10	278	19	287	8.70e-102	299
MS.gene45619.t1	MTR_1g105900	53.668	259	116	4	23	278	34	291	6.70e-101	297
MS.gene45619.t1	MTR_7g084750	52.918	257	119	2	23	278	32	287	5.49e-100	295
MS.gene45619.t1	MTR_1g105495	53.053	262	119	2	21	278	33	294	9.71e-100	294
MS.gene45619.t1	MTR_2g089140	51.866	268	117	3	21	279	23	287	3.70e-99	292
MS.gene45619.t1	MTR_4g045853	51.493	268	118	4	21	279	25	289	2.67e-98	290
MS.gene45619.t1	MTR_4g128410	51.527	262	119	5	21	278	23	280	3.22e-95	282
MS.gene45619.t1	MTR_8g013055	52.308	260	117	5	23	279	31	286	6.90e-94	279
MS.gene45619.t1	MTR_4g126920	49.442	269	125	4	16	278	18	281	5.48e-93	276
MS.gene45619.t1	MTR_7g093530	48.485	264	126	4	21	279	22	280	4.19e-91	271
MS.gene45619.t1	MTR_3g084630	49.808	261	123	3	19	278	24	277	1.17e-90	270
MS.gene45619.t1	MTR_3g084620	49.808	261	123	3	19	278	24	277	1.27e-90	270
MS.gene45619.t1	MTR_4g128580	49.259	270	122	5	19	278	21	285	2.50e-90	270
MS.gene45619.t1	MTR_8g102910	50.000	264	124	5	21	279	20	280	1.28e-89	268
MS.gene45619.t1	MTR_4g128400	48.438	256	130	2	25	279	30	284	1.56e-89	268
MS.gene45619.t1	MTR_6g088320	49.248	266	127	5	21	281	24	286	2.28e-89	267
MS.gene45619.t1	MTR_2g089140	54.667	225	92	2	64	279	1	224	2.62e-89	265
MS.gene45619.t1	MTR_8g081040	49.808	261	124	4	19	278	27	281	5.01e-89	266
MS.gene45619.t1	MTR_4g128570	49.049	263	118	4	17	278	25	272	9.03e-89	265
MS.gene45619.t1	MTR_2g038860	46.296	270	130	4	21	280	24	288	1.66e-87	263
MS.gene45619.t1	MTR_2g038705	46.296	270	130	4	21	280	24	288	1.66e-87	263
MS.gene45619.t1	MTR_7g056090	47.012	251	128	4	21	270	30	276	5.52e-80	243
MS.gene45619.t1	MTR_8g102220	45.594	261	122	4	19	278	25	266	4.54e-79	241
MS.gene45619.t1	MTR_4g128590	43.820	267	121	5	21	278	29	275	1.30e-77	237
MS.gene45619.t1	MTR_5g091730	43.629	259	139	3	21	278	26	278	2.80e-73	226
MS.gene45619.t1	MTR_3g089540	45.283	265	137	5	17	278	23	282	2.54e-71	221
MS.gene45619.t1	MTR_2g049030	41.502	253	137	7	23	272	30	274	5.53e-68	213
MS.gene45619.t1	MTR_2g049130	43.443	244	133	5	23	265	29	268	1.49e-65	206
MS.gene45619.t1	MTR_5g029100	39.259	270	152	6	20	278	37	305	4.48e-58	189
MS.gene45619.t1	MTR_1g033420	42.387	243	133	6	42	279	52	292	1.91e-57	187
MS.gene45619.t1	MTR_4g057450	37.891	256	144	7	22	270	49	296	2.21e-54	178
MS.gene45619.t1	MTR_2g095800	36.567	268	148	9	22	278	53	309	2.87e-53	176
MS.gene45619.t1	MTR_5g029100	41.379	232	126	6	56	278	44	274	1.13e-52	174
MS.gene45619.t1	MTR_8g064180	34.572	269	163	6	21	278	44	310	1.20e-52	174
MS.gene45619.t1	MTR_8g090100	36.630	273	154	8	20	279	16	282	1.94e-52	174
MS.gene45619.t1	MTR_7g102260	36.604	265	149	9	23	278	37	291	5.98e-50	167
MS.gene45619.t1	MTR_1g063020	36.226	265	152	7	22	278	39	294	1.96e-49	165
MS.gene45619.t1	MTR_8g479340	37.297	185	54	3	96	278	11	135	6.92e-32	115
MS.gene45619.t1	MTR_8g032640	32.571	175	111	4	44	217	32	200	3.58e-17	78.6
MS.gene45619.t1	MTR_4g097650	100.000	33	0	0	21	53	30	62	3.10e-16	72.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45619.t1	AT5G65730	77.907	258	57	0	21	278	33	290	1.60e-160	448
MS.gene45619.t1	AT4G37800	75.954	262	63	0	21	282	32	293	8.48e-159	444
MS.gene45619.t1	AT5G13870	53.030	264	122	2	16	278	25	287	2.23e-103	303
MS.gene45619.t1	AT5G13870	53.030	264	122	2	16	278	25	287	2.23e-103	303
MS.gene45619.t1	AT5G13870	53.030	264	122	2	16	278	25	287	2.23e-103	303
MS.gene45619.t1	AT4G03210	55.939	261	109	3	21	278	27	284	1.79e-102	301
MS.gene45619.t1	AT1G11545	52.830	265	115	4	22	278	37	299	7.42e-100	295
MS.gene45619.t1	AT2G06850	54.086	257	116	2	23	278	35	290	2.30e-99	293
MS.gene45619.t1	AT2G14620	52.124	259	120	3	23	278	37	294	1.28e-98	291
MS.gene45619.t1	AT4G03210	56.175	251	103	3	31	278	10	256	6.73e-97	286
MS.gene45619.t1	AT5G57550	51.154	260	120	4	21	278	28	282	1.00e-94	281
MS.gene45619.t1	AT3G23730	50.951	263	123	4	21	278	25	286	2.02e-94	280
MS.gene45619.t1	AT2G06850	56.388	227	97	2	53	278	5	230	1.13e-91	271
MS.gene45619.t1	AT5G57560	48.699	269	125	4	21	281	21	284	8.53e-91	271
MS.gene45619.t1	AT4G14130	49.618	262	125	4	21	278	26	284	5.43e-90	269
MS.gene45619.t1	AT4G25810	49.621	264	129	4	21	281	24	286	1.82e-89	268
MS.gene45619.t1	AT5G57530	49.049	263	124	5	21	278	25	282	2.73e-89	267
MS.gene45619.t1	AT4G13090	47.426	272	138	3	10	278	19	288	8.63e-89	266
MS.gene45619.t1	AT4G30270	49.035	259	116	5	21	278	22	265	4.16e-88	263
MS.gene45619.t1	AT5G57540	48.289	263	126	5	21	278	24	281	9.10e-88	263
MS.gene45619.t1	AT2G14620	52.193	228	105	3	54	278	18	244	1.25e-86	259
MS.gene45619.t1	AT5G48070	46.360	261	131	6	21	278	27	281	2.21e-86	259
MS.gene45619.t1	AT4G25820	47.909	263	127	4	21	278	28	285	3.14e-85	257
MS.gene45619.t1	AT2G14620	52.489	221	101	3	61	278	14	233	1.10e-84	254
MS.gene45619.t1	AT2G18800	47.407	270	127	4	23	278	28	296	1.24e-83	253
MS.gene45619.t1	AT4G13080	46.484	256	134	3	23	278	39	291	4.76e-83	251
MS.gene45619.t1	AT3G25050	45.802	262	135	4	20	278	32	289	2.15e-82	249
MS.gene45619.t1	AT4G28850	44.981	269	139	4	16	278	22	287	4.36e-81	246
MS.gene45619.t1	AT4G30290	46.468	269	135	6	13	278	14	276	4.42e-81	246
MS.gene45619.t1	AT4G30280	45.725	269	137	6	13	278	19	281	1.98e-79	242
MS.gene45619.t1	AT1G65310	46.743	261	130	6	21	278	27	281	1.04e-78	240
MS.gene45619.t1	AT1G65310	46.743	261	130	6	21	278	49	303	1.53e-78	240
MS.gene45619.t1	AT1G14720	39.925	268	149	8	20	279	28	291	2.25e-57	187
MS.gene45619.t1	AT1G32170	37.993	279	162	7	9	279	19	294	3.11e-57	187
MS.gene45619.t1	AT1G10550	36.047	258	149	6	35	278	54	309	2.32e-54	179
MS.gene45619.t1	AT3G48580	37.269	271	150	8	12	280	23	275	3.86e-54	177
MS.gene45619.t1	AT2G01850	36.604	265	162	5	20	279	28	291	1.15e-53	177
MS.gene45619.t1	AT3G44990	35.581	267	153	6	21	278	37	293	2.88e-51	170
MS.gene45619.t1	AT4G18990	35.507	276	157	6	23	279	40	313	4.46e-51	171
MS.gene45619.t1	AT2G36870	35.955	267	148	9	23	278	43	297	7.59e-50	167
MS.gene45619.t1	AT3G48580	38.261	230	123	7	53	280	4	216	3.06e-46	155
MS.gene45619.t1	AT4G18990	34.764	233	125	6	72	279	9	239	1.42e-40	142
MS.gene45619.t1	AT3G48580	33.210	271	141	9	12	280	23	255	8.68e-39	137
MS.gene45619.t1	AT2G36870	41.304	138	72	4	23	153	43	178	5.97e-27	103

Find 65 sgRNAs with CRISPR-Local

Find 133 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGTTCTTGTATACTCTTAT+TGG	0.169777	8.4:-24812325	None:intergenic
CTTGATCAATTTGCTTGATA+TGG	0.190810	8.4:-24811212	None:intergenic
TTCACACTTACTCAATTCTT+TGG	0.200130	8.4:+24811740	MS.gene45619:CDS
CATTATGGGAAGCTGATAAT+TGG	0.203518	8.4:+24812401	MS.gene45619:CDS
ACCCCACATGAGTGTCTTTC+AGG	0.215363	8.4:+24812667	MS.gene45619:CDS
GACATGAAAGTCTTGATTAA+AGG	0.250837	8.4:-24811175	None:intergenic
GTGGATTAGAGAAAATTAAT+TGG	0.259471	8.4:+24812434	MS.gene45619:CDS
CTTTATTTACTTACACAATA+TGG	0.267037	8.4:-24811771	None:intergenic
GAGAACAAAGAGTTAATCTT+TGG	0.282944	8.4:+24811698	MS.gene45619:CDS
TGACACTGTTCGTGATGAAT+TGG	0.356338	8.4:+24811597	MS.gene45619:CDS
TTGATCAATTTGCTTGATAT+GGG	0.378785	8.4:-24811211	None:intergenic
AGACACTCATGTGGGGTCAT+TGG	0.379857	8.4:-24812661	None:intergenic
TCCAAGGTGAAGTACTTGTT+TGG	0.390007	8.4:+24811410	MS.gene45619:CDS
GCTTACCAGAGCCTTGGTCT+AGG	0.393896	8.4:-24811254	None:intergenic
GACACTCATGTGGGGTCATT+GGG	0.402289	8.4:-24812660	None:intergenic
GGGTTAGTGGCACATGTAGT+TGG	0.414336	8.4:-24812520	None:intergenic
ATTGAAGGATGTGCAATTCC+AGG	0.423415	8.4:+24812496	MS.gene45619:CDS
CAGGACAAGACAAACTGTTT+AGG	0.437944	8.4:+24810831	MS.gene45619:CDS
CCTATACCTTCTAGCTTCAA+TGG	0.438940	8.4:-24812584	None:intergenic
TACAAGAACAATGAAGCAAA+AGG	0.440360	8.4:+24812337	MS.gene45619:CDS
GCACACGCCCAGAAAATGAT+TGG	0.448603	8.4:+24810777	None:intergenic
ATGTTTGTTTGAACTGTGTA+AGG	0.451638	8.4:-24811652	None:intergenic
ATTATGGGAAGCTGATAATT+GGG	0.454763	8.4:+24812402	MS.gene45619:CDS
CAAACAAACATTTATGCTCA+TGG	0.456844	8.4:+24811664	MS.gene45619:CDS
AGGTTGCGGGTTTGCTTCCA+AGG	0.460427	8.4:+24811394	MS.gene45619:intron
AACATTTATGCTCATGGAAA+GGG	0.466489	8.4:+24811670	MS.gene45619:CDS
AGTTTGTCTTGTCCTGTGCT+TGG	0.470649	8.4:-24810824	None:intergenic
GTGGCACATGTAGTTGGTCC+TGG	0.486861	8.4:-24812514	None:intergenic
AGCCTTGGTCTAGGGTAAGT+TGG	0.505926	8.4:-24811245	None:intergenic
ACCTTTCTATGCTTATTACA+AGG	0.510047	8.4:+24812465	MS.gene45619:CDS
TTAGTGCCATTGAAGCTAGA+AGG	0.511286	8.4:+24812578	MS.gene45619:CDS
CTTACCAGAGCCTTGGTCTA+GGG	0.512113	8.4:-24811253	None:intergenic
TGAGTTCTTGGGAAACCGTA+CGG	0.514708	8.4:+24811624	MS.gene45619:CDS
AAACATTTATGCTCATGGAA+AGG	0.519040	8.4:+24811669	MS.gene45619:CDS
TATGTTGCTTACCAGAGCCT+TGG	0.521244	8.4:-24811260	None:intergenic
ATTATTGTCAAGATAAATCA+AGG	0.521408	8.4:+24812635	MS.gene45619:CDS
CTGTGTAAGGTTGTCCCGTA+CGG	0.522062	8.4:-24811639	None:intergenic
TGATGAAAGTGGCCAAGCAC+AGG	0.524935	8.4:+24810812	MS.gene45619:CDS
CACACGCCCAGAAAATGATT+GGG	0.531484	8.4:+24810778	None:intergenic
GAGTTCTTGGGAAACCGTAC+GGG	0.532873	8.4:+24811625	MS.gene45619:CDS
CATATCAAGCAAATTGATCA+AGG	0.537805	8.4:+24811213	MS.gene45619:CDS
CTTGTCCCTGGAGATTCTGC+TGG	0.538897	8.4:+24811455	MS.gene45619:CDS
CCATTGAAGCTAGAAGGTAT+AGG	0.547043	8.4:+24812584	MS.gene45619:CDS
TGATCAATTTGCTTGATATG+GGG	0.550945	8.4:-24811210	None:intergenic
ACAGTACCAGCAGAATCTCC+AGG	0.553960	8.4:-24811461	None:intergenic
ACAAGAACAATGAAGCAAAA+GGG	0.563731	8.4:+24812338	MS.gene45619:CDS
TCCTTGTAATAAGCATAGAA+AGG	0.566971	8.4:-24812466	None:intergenic
GATAATTGGGCAACAAGAGG+TGG	0.576591	8.4:+24812415	MS.gene45619:CDS
TTGAAGCTAGAAGGTATAGG+TGG	0.577676	8.4:+24812587	MS.gene45619:CDS
ACCAAACAAGTACTTCACCT+TGG	0.584817	8.4:-24811411	None:intergenic
TAAGTGTGAAAGTCAGCAGA+AGG	0.588490	8.4:-24811727	None:intergenic
ATGAAGATCAAACTTGTCCC+TGG	0.600124	8.4:+24811443	MS.gene45619:CDS
CAAACAGAGGATGATGAAAG+TGG	0.602791	8.4:+24810801	MS.gene45619:CDS
TAATGTTGAAAATACTCCCA+TGG	0.606737	8.4:-24812383	None:intergenic
GACAATAATCATAGATCACA+TGG	0.610597	8.4:-24812621	None:intergenic
TGCCTGAAAGACACTCATGT+GGG	0.615126	8.4:-24812669	None:intergenic
ATCAAGACTTTCATGTCACG+TGG	0.617056	8.4:+24811181	MS.gene45619:CDS
CTTACCCTAGACCAAGGCTC+TGG	0.621562	8.4:+24811249	MS.gene45619:CDS
GCTGATAATTGGGCAACAAG+AGG	0.638048	8.4:+24812412	MS.gene45619:CDS
GAAAATGATTGGGCAAACAG+AGG	0.646942	8.4:+24810788	None:intergenic
TGAAGCTAGAAGGTATAGGT+GGG	0.659236	8.4:+24812588	MS.gene45619:CDS
GCCTGAAAGACACTCATGTG+GGG	0.659861	8.4:-24812668	None:intergenic
ATGCCTGAAAGACACTCATG+TGG	0.662116	8.4:-24812670	None:intergenic
CAGTACCAGCAGAATCTCCA+GGG	0.665682	8.4:-24811460	None:intergenic
ATCCAACTTACCCTAGACCA+AGG	0.669978	8.4:+24811243	MS.gene45619:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATGATTAGTAAATATATT+AGG	-	chr8.4:24811906-24811925	None:intergenic	10.0%
!!!	TAATGAACTATAATATATTT+TGG	-	chr8.4:24811310-24811329	None:intergenic	10.0%
!!	AAGACATTATTGTATTTAAA+AGG	-	chr8.4:24811093-24811112	None:intergenic	15.0%
!!	AATAGTACTATACTATAATT+TGG	+	chr8.4:24811343-24811362	MS.gene45619:intron	15.0%
!!	AGACATTATTGTATTTAAAA+GGG	-	chr8.4:24811092-24811111	None:intergenic	15.0%
!!	GTATAATGTAATGTATTATA+TGG	-	chr8.4:24811049-24811068	None:intergenic	15.0%
!!!	AAAAATATACTTTGATTTTG+TGG	+	chr8.4:24812230-24812249	MS.gene45619:intron	15.0%
!!!	AAAAGATTATATTCAGTTTT+TGG	-	chr8.4:24811551-24811570	None:intergenic	15.0%
!!!	GAATATAATCTTTTTTTTTG+TGG	+	chr8.4:24811557-24811576	MS.gene45619:intron	15.0%
!!!	TATAATATATTTTGGACATT+AGG	-	chr8.4:24811302-24811321	None:intergenic	15.0%
!!!	TATATTTATACATGAAGTTT+TGG	-	chr8.4:24810985-24811004	None:intergenic	15.0%
!!!	TTTTTGAAATTATAGATAGT+CGG	-	chr8.4:24812109-24812128	None:intergenic	15.0%
!!	AGTTAAATACTTGAACATTA+CGG	+	chr8.4:24811822-24811841	MS.gene45619:intron	20.0%
!!	ATTATGTTTCAAACAAAAAG+TGG	-	chr8.4:24811520-24811539	None:intergenic	20.0%
!!	ATTATTGTCAAGATAAATCA+AGG	+	chr8.4:24812635-24812654	MS.gene45619:CDS	20.0%
!!	ATTTACTAATCATATACCAA+AGG	+	chr8.4:24811911-24811930	MS.gene45619:intron	20.0%
!!	GTATTTAAAAGGGTAAAATA+TGG	-	chr8.4:24811082-24811101	None:intergenic	20.0%
!!!	AAGTTTTGGAAAGAAAATTA+AGG	-	chr8.4:24810971-24810990	None:intergenic	20.0%
!!!	AGTTTTGGAAAGAAAATTAA+GGG	-	chr8.4:24810970-24810989	None:intergenic	20.0%
!!!	CTTTATTTACTTACACAATA+TGG	-	chr8.4:24811774-24811793	None:intergenic	20.0%
!!!	TTAACATCTTCCATTTTAAT+TGG	+	chr8.4:24810907-24810926	MS.gene45619:intron	20.0%
!	AGTTCATTGTCCAATTAAAA+TGG	-	chr8.4:24810920-24810939	None:intergenic	25.0%
!	CTTAATAATGCAAAGAATCA+TGG	+	chr8.4:24812003-24812022	MS.gene45619:intron	25.0%
!	GAAAATATTTGATTGTGGAA+TGG	-	chr8.4:24811024-24811043	None:intergenic	25.0%
!	TGGAAGAAAATATTTGATTG+TGG	-	chr8.4:24811029-24811048	None:intergenic	25.0%
!	TTGTTCTTGTATACTCTTAT+TGG	-	chr8.4:24812328-24812347	None:intergenic	25.0%
!!	TAAGTCTTAGAATGCAATTT+TGG	-	chr8.4:24812256-24812275	None:intergenic	25.0%
!!	TTGATCAATTTGCTTGATAT+GGG	-	chr8.4:24811214-24811233	None:intergenic	25.0%
!!!	ATCATCATGTGTTTTTGTTT+GGG	+	chr8.4:24811140-24811159	MS.gene45619:intron	25.0%
!!!	GTGGATTAGAGAAAATTAAT+TGG	+	chr8.4:24812434-24812453	MS.gene45619:CDS	25.0%
!!!	TACAAGGATTTTGATATTGA+AGG	+	chr8.4:24812481-24812500	MS.gene45619:CDS	25.0%
!!!	TATCATCATGTGTTTTTGTT+TGG	+	chr8.4:24811139-24811158	MS.gene45619:intron	25.0%
!!!	TCTTTTTTATGTTGTTGATG+TGG	+	chr8.4:24811109-24811128	MS.gene45619:intron	25.0%
!!!	TGTTACTTAACTTTTTGCAA+AGG	+	chr8.4:24811374-24811393	MS.gene45619:intron	25.0%
	AAACATTTATGCTCATGGAA+AGG	+	chr8.4:24811669-24811688	MS.gene45619:CDS	30.0%
	AACAACTTTGACAACTAACT+CGG	-	chr8.4:24811955-24811974	None:intergenic	30.0%
	AACATTTATGCTCATGGAAA+GGG	+	chr8.4:24811670-24811689	MS.gene45619:CDS	30.0%
	AACTCTTCTAACCACAAATT+TGG	-	chr8.4:24811857-24811876	None:intergenic	30.0%
	ACAAGAACAATGAAGCAAAA+GGG	+	chr8.4:24812338-24812357	MS.gene45619:CDS	30.0%
	ACCTTTCTATGCTTATTACA+AGG	+	chr8.4:24812465-24812484	MS.gene45619:CDS	30.0%
	ATGTTTGTTTGAACTGTGTA+AGG	-	chr8.4:24811655-24811674	None:intergenic	30.0%
	ATTATGGGAAGCTGATAATT+GGG	+	chr8.4:24812402-24812421	MS.gene45619:CDS	30.0%
	ATTGCTTTCTATACAGCTAA+GGG	-	chr8.4:24810877-24810896	None:intergenic	30.0%
	CAAACAAACATTTATGCTCA+TGG	+	chr8.4:24811664-24811683	MS.gene45619:CDS	30.0%
	CATATCAAGCAAATTGATCA+AGG	+	chr8.4:24811213-24811232	MS.gene45619:CDS	30.0%
	CATTACATTATACACATCCA+TGG	+	chr8.4:24811056-24811075	MS.gene45619:intron	30.0%
	GACAATAATCATAGATCACA+TGG	-	chr8.4:24812624-24812643	None:intergenic	30.0%
	GACATGAAAGTCTTGATTAA+AGG	-	chr8.4:24811178-24811197	None:intergenic	30.0%
	GAGAACAAAGAGTTAATCTT+TGG	+	chr8.4:24811698-24811717	MS.gene45619:CDS	30.0%
	TAATGTTGAAAATACTCCCA+TGG	-	chr8.4:24812386-24812405	None:intergenic	30.0%
	TACAAGAACAATGAAGCAAA+AGG	+	chr8.4:24812337-24812356	MS.gene45619:CDS	30.0%
	TCAAGTATTTAACTGCATGT+AGG	-	chr8.4:24811816-24811835	None:intergenic	30.0%
	TCCTTGTAATAAGCATAGAA+AGG	-	chr8.4:24812469-24812488	None:intergenic	30.0%
	TGGAAAGAAAATTAAGGGAA+AGG	-	chr8.4:24810965-24810984	None:intergenic	30.0%
	TTCACACTTACTCAATTCTT+TGG	+	chr8.4:24811740-24811759	MS.gene45619:CDS	30.0%
!	CTTGATCAATTTGCTTGATA+TGG	-	chr8.4:24811215-24811234	None:intergenic	30.0%
!	TGATCAATTTGCTTGATATG+GGG	-	chr8.4:24811213-24811232	None:intergenic	30.0%
!	TTAACTTTTTGCAAAGGTTG+CGG	+	chr8.4:24811380-24811399	MS.gene45619:intron	30.0%
!!	TCATCATGTGTTTTTGTTTG+GGG	+	chr8.4:24811141-24811160	MS.gene45619:intron	30.0%
!!!	GAATTGGATTTTGAGTTCTT+GGG	+	chr8.4:24811613-24811632	MS.gene45619:CDS	30.0%
!!!	GGGAGTATTTTCAACATTAT+GGG	+	chr8.4:24812387-24812406	MS.gene45619:CDS	30.0%
!!!	TGAATTGGATTTTGAGTTCT+TGG	+	chr8.4:24811612-24811631	MS.gene45619:CDS	30.0%
!!!	TGGGAGTATTTTCAACATTA+TGG	+	chr8.4:24812386-24812405	MS.gene45619:CDS	30.0%
	AAAAGGGTAAAATATGGCCA+TGG	-	chr8.4:24811076-24811095	None:intergenic	35.0%
	AAGTCTTGATTAAAGGTTGC+TGG	-	chr8.4:24811171-24811190	None:intergenic	35.0%
	ACAAGACAAACTGTTTAGGT+AGG	+	chr8.4:24810835-24810854	MS.gene45619:intron	35.0%
	CACTAACCCAAAAAATTGGT+GGG	+	chr8.4:24812534-24812553	MS.gene45619:CDS	35.0%
	CATTATGGGAAGCTGATAAT+TGG	+	chr8.4:24812401-24812420	MS.gene45619:CDS	35.0%
	CATTGCTTTCTATACAGCTA+AGG	-	chr8.4:24810878-24810897	None:intergenic	35.0%
	TCTAACCACAAATTTGGACA+CGG	-	chr8.4:24811851-24811870	None:intergenic	35.0%
!	TAACTTTTTGCAAAGGTTGC+GGG	+	chr8.4:24811381-24811400	MS.gene45619:intron	35.0%
	AACCCAAAAAATTGGTGGGA+AGG	+	chr8.4:24812538-24812557	MS.gene45619:CDS	40.0%
	ACCAAACAAGTACTTCACCT+TGG	-	chr8.4:24811414-24811433	None:intergenic	40.0%
	ACCCAAAAAATTGGTGGGAA+GGG	+	chr8.4:24812539-24812558	MS.gene45619:CDS	40.0%
	ATACCCAAAAATGCAAGCCA+TGG	+	chr8.4:24812366-24812385	MS.gene45619:CDS	40.0%
	ATAGAAGCTGCATGTGGTTA+AGG	-	chr8.4:24812293-24812312	None:intergenic	40.0%
	ATCAACATAGAAGCTGCATG+TGG	-	chr8.4:24812299-24812318	None:intergenic	40.0%
	ATCAAGACTTTCATGTCACG+TGG	+	chr8.4:24811181-24811200	MS.gene45619:CDS	40.0%
	ATGAAGATCAAACTTGTCCC+TGG	+	chr8.4:24811443-24811462	MS.gene45619:CDS	40.0%
	ATTGAAGGATGTGCAATTCC+AGG	+	chr8.4:24812496-24812515	MS.gene45619:CDS	40.0%
	CAAACAGAGGATGATGAAAG+TGG	+	chr8.4:24810801-24810820	MS.gene45619:CDS	40.0%
	CAAATGTGGCTAACAACCTT+TGG	-	chr8.4:24811930-24811949	None:intergenic	40.0%
	CAACTAACTCGGTTCAAATG+TGG	-	chr8.4:24811944-24811963	None:intergenic	40.0%
	CAGGACAAGACAAACTGTTT+AGG	+	chr8.4:24810831-24810850	MS.gene45619:CDS	40.0%
	CCACTAACCCAAAAAATTGG+TGG	+	chr8.4:24812533-24812552	MS.gene45619:CDS	40.0%
	GTGGAATGGAAATGAGAGTA+GGG	-	chr8.4:24811010-24811029	None:intergenic	40.0%
	GTTTAGGTAGGTCCTAATGA+CGG	+	chr8.4:24810847-24810866	MS.gene45619:intron	40.0%
	TAAGTGTGAAAGTCAGCAGA+AGG	-	chr8.4:24811730-24811749	None:intergenic	40.0%
	TACCCAAAAATGCAAGCCAT+GGG	+	chr8.4:24812367-24812386	MS.gene45619:CDS	40.0%
	TGACACTGTTCGTGATGAAT+TGG	+	chr8.4:24811597-24811616	MS.gene45619:CDS	40.0%
	TGTGGAATGGAAATGAGAGT+AGG	-	chr8.4:24811011-24811030	None:intergenic	40.0%
!	CCATTGAAGCTAGAAGGTAT+AGG	+	chr8.4:24812584-24812603	MS.gene45619:CDS	40.0%
!	GTGCCACTAACCCAAAAAAT+TGG	+	chr8.4:24812530-24812549	MS.gene45619:CDS	40.0%
!	TCCAAGGTGAAGTACTTGTT+TGG	+	chr8.4:24811410-24811429	MS.gene45619:CDS	40.0%
!	TGAAGCTAGAAGGTATAGGT+GGG	+	chr8.4:24812588-24812607	MS.gene45619:CDS	40.0%
!	TTAGTGCCATTGAAGCTAGA+AGG	+	chr8.4:24812578-24812597	MS.gene45619:CDS	40.0%
!	TTGAAGCTAGAAGGTATAGG+TGG	+	chr8.4:24812587-24812606	MS.gene45619:CDS	40.0%
!!	CCTATACCTTCTAGCTTCAA+TGG	-	chr8.4:24812587-24812606	None:intergenic	40.0%
!!!	ATGGCTTGCATTTTTGGGTA+TGG	-	chr8.4:24812367-24812386	None:intergenic	40.0%
!!!	CCACCAATTTTTTGGGTTAG+TGG	-	chr8.4:24812536-24812555	None:intergenic	40.0%
	AGTTTGTCTTGTCCTGTGCT+TGG	-	chr8.4:24810827-24810846	None:intergenic	45.0%
	ATCCAACTTACCCTAGACCA+AGG	+	chr8.4:24811243-24811262	MS.gene45619:CDS	45.0%
	ATGCCTGAAAGACACTCATG+TGG	-	chr8.4:24812673-24812692	None:intergenic	45.0%
	CCCAAAAAATTGGTGGGAAG+GGG	+	chr8.4:24812540-24812559	MS.gene45619:CDS	45.0%
	GATAATTGGGCAACAAGAGG+TGG	+	chr8.4:24812415-24812434	MS.gene45619:CDS	45.0%
	GCTGATAATTGGGCAACAAG+AGG	+	chr8.4:24812412-24812431	MS.gene45619:CDS	45.0%
	GGTAACCGTGTCCAAATTTG+TGG	+	chr8.4:24811843-24811862	MS.gene45619:intron	45.0%
	TGAGTTCTTGGGAAACCGTA+CGG	+	chr8.4:24811624-24811643	MS.gene45619:CDS	45.0%
	TGCCTGAAAGACACTCATGT+GGG	-	chr8.4:24812672-24812691	None:intergenic	45.0%
!	TATGTTGCTTACCAGAGCCT+TGG	-	chr8.4:24811263-24811282	None:intergenic	45.0%
!!	ACTCCCATGGCTTGCATTTT+TGG	-	chr8.4:24812373-24812392	None:intergenic	45.0%
!!	CTCCCATGGCTTGCATTTTT+GGG	-	chr8.4:24812372-24812391	None:intergenic	45.0%
!!!	ACCCCTTCCCACCAATTTTT+TGG	-	chr8.4:24812544-24812563	None:intergenic	45.0%
!!!	CCCCTTCCCACCAATTTTTT+GGG	-	chr8.4:24812543-24812562	None:intergenic	45.0%
!!!	TAAATAAATAAATCTAATTT+TGG	+	chr8.4:24812130-24812149	MS.gene45619:intron	5.0%
	ACAGTACCAGCAGAATCTCC+AGG	-	chr8.4:24811464-24811483	None:intergenic	50.0%
	ACCCCACATGAGTGTCTTTC+AGG	+	chr8.4:24812667-24812686	MS.gene45619:CDS	50.0%
	AGACACTCATGTGGGGTCAT+TGG	-	chr8.4:24812664-24812683	None:intergenic	50.0%
	CAGTACCAGCAGAATCTCCA+GGG	-	chr8.4:24811463-24811482	None:intergenic	50.0%
	CTGTGTAAGGTTGTCCCGTA+CGG	-	chr8.4:24811642-24811661	None:intergenic	50.0%
	CTTACCAGAGCCTTGGTCTA+GGG	-	chr8.4:24811256-24811275	None:intergenic	50.0%
	GACACTCATGTGGGGTCATT+GGG	-	chr8.4:24812663-24812682	None:intergenic	50.0%
	GAGTTCTTGGGAAACCGTAC+GGG	+	chr8.4:24811625-24811644	MS.gene45619:CDS	50.0%
	GCCTGAAAGACACTCATGTG+GGG	-	chr8.4:24812671-24812690	None:intergenic	50.0%
	GCTAAGGGTTTGCCGTCATT+AGG	-	chr8.4:24810862-24810881	None:intergenic	50.0%
	TGATGAAAGTGGCCAAGCAC+AGG	+	chr8.4:24810812-24810831	MS.gene45619:CDS	50.0%
!	AGCCTTGGTCTAGGGTAAGT+TGG	-	chr8.4:24811248-24811267	None:intergenic	50.0%
!	GGGTTAGTGGCACATGTAGT+TGG	-	chr8.4:24812523-24812542	None:intergenic	50.0%
	CTTACCCTAGACCAAGGCTC+TGG	+	chr8.4:24811249-24811268	MS.gene45619:CDS	55.0%
	CTTGTCCCTGGAGATTCTGC+TGG	+	chr8.4:24811455-24811474	MS.gene45619:CDS	55.0%
	GCTTACCAGAGCCTTGGTCT+AGG	-	chr8.4:24811257-24811276	None:intergenic	55.0%
	GTGGCACATGTAGTTGGTCC+TGG	-	chr8.4:24812517-24812536	None:intergenic	55.0%
!	AGGTTGCGGGTTTGCTTCCA+AGG	+	chr8.4:24811394-24811413	MS.gene45619:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.4	gene	24810792	24812696	24810792	ID=MS.gene45619
chr8.4	mRNA	24810792	24812696	24810792	ID=MS.gene45619.t1;Parent=MS.gene45619
chr8.4	exon	24810792	24810852	24810792	ID=MS.gene45619.t1.exon1;Parent=MS.gene45619.t1
chr8.4	CDS	24810792	24810852	24810792	ID=cds.MS.gene45619.t1;Parent=MS.gene45619.t1
chr8.4	exon	24811172	24811270	24811172	ID=MS.gene45619.t1.exon2;Parent=MS.gene45619.t1
chr8.4	CDS	24811172	24811270	24811172	ID=cds.MS.gene45619.t1;Parent=MS.gene45619.t1
chr8.4	exon	24811396	24811496	24811396	ID=MS.gene45619.t1.exon3;Parent=MS.gene45619.t1
chr8.4	CDS	24811396	24811496	24811396	ID=cds.MS.gene45619.t1;Parent=MS.gene45619.t1
chr8.4	exon	24811583	24811779	24811583	ID=MS.gene45619.t1.exon4;Parent=MS.gene45619.t1
chr8.4	CDS	24811583	24811779	24811583	ID=cds.MS.gene45619.t1;Parent=MS.gene45619.t1
chr8.4	exon	24812306	24812696	24812306	ID=MS.gene45619.t1.exon5;Parent=MS.gene45619.t1
chr8.4	CDS	24812306	24812696	24812306	ID=cds.MS.gene45619.t1;Parent=MS.gene45619.t1

Gene Sequence

>MS.gene45619

ATGATTGGGCAAACAGAGGATGATGAAAGTGGCCAAGCACAGGACAAGACAAACTGTTTAGGTAGGTCCTAATGACGGCAAACCCTTAGCTGTATAGAAAGCAATGTTATATGTTTTAACATCTTCCATTTTAATTGGACAATGAACTGATTGATTATTCTCTTCTTTTTCCTTTCCCTTAATTTTCTTTCCAAAACTTCATGTATAAATATAGACCCTACTCTCATTTCCATTCCACAATCAAATATTTTCTTCCATATAATACATTACATTATACACATCCATGGCCATATTTTACCCTTTTAAATACAATAATGTCTTTTTTATGTTGTTGATGTGGATTCTCTTATCATCATGTGTTTTTGTTTGGGGACGACCAGCAACCTTTAATCAAGACTTTCATGTCACGTGGTCTGAACCCCATATCAAGCAAATTGATCAAGGCAGAACTATCCAACTTACCCTAGACCAAGGCTCTGGTAAGCAACATATATTATATTATACACTCCTAATGTCCAAAATATATTATAGTTCATTAAACATAAATAACAAATAGTACTATACTATAATTTGGATAAGTCATGTTACTTAACTTTTTGCAAAGGTTGCGGGTTTGCTTCCAAGGTGAAGTACTTGTTTGGTCTTGTTAGCATGAAGATCAAACTTGTCCCTGGAGATTCTGCTGGTACTGTTACTGCATTTTATGTAAGTTCAAACTAATTTCTCCACTTTTTGTTTGAAACATAATTAAATGAGCCAAAAACTGAATATAATCTTTTTTTTTGTGGTAGATGAACTCTGATACTGACACTGTTCGTGATGAATTGGATTTTGAGTTCTTGGGAAACCGTACGGGACAACCTTACACAGTTCAAACAAACATTTATGCTCATGGAAAGGGTGATAGAGAACAAAGAGTTAATCTTTGGTTTGATCCTTCTGCTGACTTTCACACTTACTCAATTCTTTGGAATCATCACCATATTGTGTAAGTAAATAAAGATAAGCATAAGCGTTCAAACCTACATGCAGTTAAATACTTGAACATTACGGTAACCGTGTCCAAATTTGTGGTTAGAAGAGTTACATTGTTAGTTAATAAATTTAGACACCTAATATATTTACTAATCATATACCAAAGGTTGTTAGCCACATTTGAACCGAGTTAGTTGTCAAAGTTGTTTGAGTTTAATTGTTCAAAAATCTTTTCTCTTAATAATGCAAAGAATCATGGTTAGACATTGCTGACTAATACAAGACAAGAAAGAAAAATAAATAGCGATGACAGAAATTTATAGTAGAAATATGTAAAATCCGACTATCTATAATTTCAAAAAATAAATAAATAAATCTAATTTTGGTCACTTACTATAATTTTAATACAAGCATGACTACAATCACTTATTACTTATAGTCACAATGTTGTCGCATAATCATAAAAAATATACTTTGATTTTGTGGCCAAAATTGCATTCTAAGACTTAAGACTTACGTAAGACCTTAACCACATGCAGCTTCTATGTTGATGAAGTTCCAATAAGAGTATACAAGAACAATGAAGCAAAAGGGATACCATACCCAAAAATGCAAGCCATGGGAGTATTTTCAACATTATGGGAAGCTGATAATTGGGCAACAAGAGGTGGATTAGAGAAAATTAATTGGAGTAAAGCACCTTTCTATGCTTATTACAAGGATTTTGATATTGAAGGATGTGCAATTCCAGGACCAACTACATGTGCCACTAACCCAAAAAATTGGTGGGAAGGGGTTGAATATCAAGCTCTTAGTGCCATTGAAGCTAGAAGGTATAGGTGGGTTCGTATGAACCATGTGATCTATGATTATTGTCAAGATAAATCAAGGTACCCAATGACCCCACATGAGTGTCTTTCAGGCATTTAA

Protein sequence

>MS.gene45619.t1

MIGQTEDDESGQAQDKTNCLATFNQDFHVTWSEPHIKQIDQGRTIQLTLDQGSGCGFASKVKYLFGLVSMKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGNRTGQPYTVQTNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHIVFYVDEVPIRVYKNNEAKGIPYPKMQAMGVFSTLWEADNWATRGGLEKINWSKAPFYAYYKDFDIEGCAIPGPTTCATNPKNWWEGVEYQALSAIEARRYRWVRMNHVIYDYCQDKSRYPMTPHECLSGI